[ncl-install] Fwd: installation tests work but ncargf90 does not run

Simon Mason simon at iri.columbia.edu
Thu Jul 22 10:32:13 MDT 2021


... To elaborate, the error messages I receive are:

1. Before conda activate

f77 -fPIC -g -O2 -fdebug-prefix-map=/build/ncl-ncarg=. 
-fstack-protector-strong -fno-second-underscore -fno-range-check -fPIE 
-Wl,-z,relro -Wl,-z,now -Wl,-z,relro -Wl,-z,now -L../../../.././shared 
maps.f95 -L/usr/lib/x86_64-linux-gnu/ncarg -lncarg -lncarg_gks -lncarg_c 
-lX11 -lXext -lcairo -lXrender -lfontconfig -lpixman-1 -lfreetype 
-lexpat -lpng -lz -lbz2
/usr/bin/ld: cannot find -lX11
/usr/bin/ld: cannot find -lXext
/usr/bin/ld: cannot find -lcairo
/usr/bin/ld: cannot find -lXrender
/usr/bin/ld: cannot find -lfontconfig
/usr/bin/ld: cannot find -lpixman-1
/usr/bin/ld: cannot find -lfreetype
/usr/bin/ld: cannot find -lexpat
/usr/bin/ld: cannot find -lpng
/usr/bin/ld: cannot find -lz
/usr/bin/ld: cannot find -lbz2
collect2: error: ld returned 1 exit status

2. After conda activate

home/conda/feedstock_root/build_artifacts/ncl_1602173391809/_build_env/bin/x86_64-conda-linux-gnu-gfortran 
-fPIC -fno-second-underscore -fno-range-check -fopenmp -O 
-L/home/simon/anaconda3/envs/ncl_stable/lib -Wl,-O2 -Wl,--sort-common 
-Wl,--as-needed -Wl,-z,relro -Wl,-z,now -Wl,--disable-new-dtags 
-Wl,--gc-sections -Wl,-rpath,/home/simon/anaconda3/envs/ncl_stable/lib 
-Wl,-rpath-link,/home/simon/anaconda3/envs/ncl_stable/lib 
-L/home/simon/anaconda3/envs/ncl_stable/lib maps.f95 
-L/home/simon/anaconda3/envs/ncl_stable/lib -L/usr/X11R6/lib64 -lncarg 
-lncarg_gks -lncarg_c -lX11 -lXext -lcairo -lXrender -lfontconfig 
-lpixman-1 -lfreetype -lexpat -lpng -lz -lbz2
/home/conda/feedstock_root/build_artifacts/ncl_1602173391809/_build_env/bin/x86_64-conda-linux-gnu-gfortran: 
Command not found.




On 7/22/21 9:54 AM, Orhan Eroglu wrote:
> Hi Simon,
>
> Could you please provide the he outputs of the following three commands:
>
> which ncl
> ncl -V
> env  | grep NCARG
> Thanks!
>
> On Mon, Jul 19, 2021 at 11:13 AM Simon J Mason via ncl-install 
> <ncl-install at mailman.ucar.edu <mailto:ncl-install at mailman.ucar.edu>> 
> wrote:
>
>     I have successfully installed NCAR Graphics on ubuntu using
>     anaconda, as
>
>     per the recommendation. The following commands all performed as they
>     should:
>
>        ncl -V
>        ncl $NCARG_ROOT/lib/ncarg/nclex/gsun/gsun02n.ncl
>        ncl $NCARG_ROOT/lib/ncarg/nclex/nug/NUG_multi_timeseries.ncl
>
>     However, if I try to run ncargf90 on this new installation, I get
>     a long error message
>     ultimately saying:
>
>     /home/conda/feedstock_root/build_artifacts/ncl_1602173391809/_build_env/bin/x86_64-conda-linux-gnu-gfortran:
>     Command not found.
>
>     I do not seem to have a /home/conda directory, and am new to Anaconda.
>
>     Please advise.
>
>     Many thanks,
>
>     Simon Mason
>
>
>     -- 
>     ____________________________________________________________________
>     Senior Research Scientist
>     Chief Climate Scientist
>
>     Tel   : +1 845 680 4514          IRI, Columbia University
>     Fax   : +1 845 680 4865          61 Route 9W, PO Box 1000
>     E-mail:simon at iri.columbia.edu  <mailto:simon at iri.columbia.edu>    Palisades, NY 10964-8000
>     WWW   :http://iri.columbia.edu/contact/staff-directory/simon-mason/  <http://iri.columbia.edu/contact/staff-directory/simon-mason/>
>
>     Ἆρα σύ, ὦ Σώκρατες, ὁ φροντιστὴς ἐπικαλούμενος;
>     Οὐκοῦν κάλλιον, ἔφη, ἢ εἰ ἀφρόντιστος ἐκαλούμην.
>     Εἰ μή γε ἐδόκεις τῶν μετεώρων φροντιστὴς εἶναι.
>
>     Xenophon
>     ____________________________________________________________________
>
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