[ncl-talk] trouble reading .h5 file

[Manisha Ganeshan]

I'm confirming that I'm in fact using version 6.6.2 (I've checked ncl -v).
It's odd that I'm able to read the file in another linux system which is
very similar to the one I'm using. Both systems have NCL version 6.6.2.
Unfortunately, all the data are in the first linux system, and so I'm
trying to find an efficient way to solve this problem.


On Fri, Aug 21, 2020 at 4:39 PM Rick Brownrigg <brownrig at ucar.edu> wrote:

> Well I don't think the size (1.5GB) is an issue. Again, are you using an
> older version?
>
>     ncl -v
>
> Is it failing when you do a simple addfile()?  Or when you actually access
> a particular variable?
>
> On Fri, Aug 21, 2020 at 1:17 PM Manisha Ganeshan <
> manisha.ganeshan86 at gmail.com> wrote:
>
>> Is there any other reason it could be failing due to segmentation fault?
>>
>> On Fri, Aug 21, 2020 at 2:57 PM Manisha Ganeshan <
>> manisha.ganeshan86 at gmail.com> wrote:
>>
>>> Hi Rick,
>>>
>>> I'm using the same version (6.6.2). I installed using conda, and so far
>>> it has worked okay. I've read .he5 files using the same version.
>>>
>>> Nisha
>>>
>>> On Fri, Aug 21, 2020 at 1:54 PM Rick Brownrigg <brownrig at ucar.edu>
>>> wrote:
>>>
>>>> Hi Nisha,
>>>>
>>>> I was able to read that file just fine with ncl_filedump.  This is on a
>>>> mac using the latest version, ncl v6.6.2
>>>>
>>>> Are you using an older version of NCL?  More recent versions have
>>>> better and more complete support for HDF5.
>>>>
>>>> Hope that helps...
>>>> Rick
>>>>
>>>>
>>>> On Fri, Aug 21, 2020 at 11:25 AM Manisha Ganeshan via ncl-talk <
>>>> ncl-talk at mailman.ucar.edu> wrote:
>>>>
>>>>>  ATL09_20181016052938_02690101_002_01.h5
>>>>> <https://drive.google.com/file/d/1RICsYg5nwZTcVeCGJmdkvED445pQaTp6/view?usp=drive_web>
>>>>> Hello,
>>>>>
>>>>> I'm trying to read the attached hdf5 file but I get a segmentation
>>>>> fault. Is it because of the size which is roughly 1.5 gb?
>>>>> Even when I try ncl_filedump, I get the same error message.
>>>>> I'd appreciate any help or suggestions.
>>>>>
>>>>> Thanks,
>>>>> Nisha
>>>>>
>>>>>
>>>>> --
>>>>> Dr. Manisha Ganeshan
>>>>> Universities Space Research Association
>>>>> Maryland, U.S.A.
>>>>> _______________________________________________
>>>>> ncl-talk mailing list
>>>>> ncl-talk at mailman.ucar.edu
>>>>> List instructions, subscriber options, unsubscribe:
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>>>>
>>>>
>>>
>>> --
>>> Dr. Manisha Ganeshan
>>> Universities Space Research Association
>>> Maryland, U.S.A.
>>>
>>
>>
>> --
>> Dr. Manisha Ganeshan
>> Universities Space Research Association
>> Maryland, U.S.A.
>>
>

-- 
Dr. Manisha Ganeshan
Universities Space Research Association
Maryland, U.S.A.
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