[ncl-talk] h5 dataset

Dennis Shea shea at ucar.edu
Thu Mar 31 08:21:31 MDT 2016


The error message says the file does not exist.
       f = addfile("./3DIMG_23APR2015_1200_L1B_STD.h5", "r")
Are you sure that the file is in the current directory?

===
There have been *significant* upgrades tp NCL's H5 capabilities since 6.3.0.

They will be in the (as yet, unreleased 6.4.0).

===
Please make the file available. You can ftp the file via

ftp ftp.cgd.ucar.edu
anonymous
email
cd incoming
put 3DIMG_23APR2015_1200_L1B_STD.h5
quit

Then, after a successful transfer, send ncl-talk a message


On Thu, Mar 31, 2016 at 1:40 AM, Geeta Geeta <geetag54 at yahoo.com> wrote:

> Hi all.
> I am trying to read a satellite data file which has h5 extension. when I
> do ncl_filesdump, I am able to see the variables and other details of the
> file but addfile function is not able to read it.
> Copyright (C) 1995-2015 - All Rights Reserved
>  University Corporation for Atmospheric Research
>  NCAR Command Language Version 6.3.0
>  The use of this software is governed by a License Agreement.
>  See http://www.ncl.ucar.edu/ for more details.
>
> Variable: f
> Type: file
> filename:    3DIMG_23APR2015_1200_LIB_STD
> path:    3DIMG_23APR2015_1200_LIB_STD.h5
>    file global attributes:
>       Acquisition_Date : 23APR2015
>       Acquisition_End_Time : 23-APR-2015T12:26:52
>       Acquisition_Start_Time : 23-APR-2015T12:00:02
>       Acquisition_Time_in_GMT : 1200PR-2015T12:00:02
>       Attitude_Source : STARPR-2015T12:00:02
>       Datum : WGS84R-2015T12:00:02
>       Ellipsoid : WGS84R-2015T12:00:02
>       FastScan_Linearity_Enabled : noS84R-2015T12:00:02
>       Field_of_View(degrees) : 17.973925
>       Ground_Station : IMD,New Delhi,INDIA.
>       HDF_Product_File_Name : 3DIMG_23APR2015_1200_L1B_STD.h5
>       Imaging_Mode : FULL FRAMER2015_1200_L1B_STD.h5
>       MCD_FS_Enabled : noLL FRAMER2015_1200_L1B_STD.h5
>       MCD_SS_Enabled : noLL FRAMER2015_1200_L1B_STD.h5
>       MIR_Acquisition_Mode : MAIN FRAMER2015_1200_L1B_STD.h5
>       MIR_Gain_Mode : 2
>       Nominal_Altitude(km) : 36000
>       Nominal_Central_Point_Coordinates(degrees)_Latitude_Longitude : (
> 0,   82 )
>       Observed_Altitude(km) : 35786.819452
>       Output_Format : hdf5-1.8.8R2015_1200_L1B_STD.h5
>       Processing_Level : L1B5-1.8.8R2015_1200_L1B_STD.h5
>       Product_Creation_Time : 2015-04-23T17:44:300_L1B_STD.h5
>       Product_Type : STANDARD(FULL DISK)0_L1B_STD.h5
>       Radiometric_Calibration_Type : LAB CALIBRATEDDISK)0_L1B_STD.h5
>       SWIR_Acquisition_Mode : MAINCALIBRATEDDISK)0_L1B_STD.h5
>       SWIR_Gain_Mode : 3
>       Sat_Azimuth(Degrees) : 290.400818
>       Sat_Elevation(Degrees) : 89.8
> Sensor_Id : IMGAT-3DBRATEDDISK)0_L1B_STD.h5
>       Sensor_Name : IMAGER3DBRATEDDISK)0_L1B_STD.h5
>       SlowScan_Linearity_Enabled : noAGER3DBRATEDDISK)0_L1B_STD.h5
>       Software_Version : 1.0GER3DBRATEDDISK)0_L1B_STD.h5
>       Station_Id : IMDGER3DBRATEDDISK)0_L1B_STD.h5
>       Sun_Azimuth(Degrees) : 282.568512
>       Sun_Elevation(Degrees) : 4.370282
>       TIR1_Acquisition_Mode : MAINER3DBRATEDDISK)0_L1B_STD.h5
>       TIR1_Gain_Mode : 2
>       TIR2_Acquisition_Mode : MAINER3DBRATEDDISK)0_L1B_STD.h5
>       TIR2_Gain_Mode : 2
>       Unique_Id : 3DIMG_23APR2015_1200_L1B_STD.h5
>       VIS_Acquisition_Mode : MAING_23APR2015_1200_L1B_STD.h5
>       VIS_Gain_Mode : 2
>       WV_Acquisition_Mode : MAING_23APR2015_1200_L1B_STD.h5
>       WV_Gain_Mode : 2
>       Yaw_Flip_Flag : YAING_23APR2015_1200_L1B_STD.h5
>       conventions : CF-1.623APR2015_1200_L1B_STD.h5
>       institute : IMD,New Delhi,INDIA._L1B_STD.h5
>       left_longitude : 0.8432964
>       lower_latitude : -81.04153
>       right_longitude : 163.1567
>       source : IMAGER (IMG)i,INDIA._L1B_STD.h5
>       title : 3DIMG_23APR2015_1200_L1B_STD.h5
>       upper_latitude : 81.04153
>    dimensions:
>       = 2816
>       time = 1
>       Latitude_WV = 1408
>       Longitude_WVISmperature = 1402
>       Latitude_VIS = 11264
>       Longitude_VISmperature = 11220
>       Latitude = 2816
>       Longitudetness = 2805
>       Temperature = 0
>       Longitudeance_VISerature = 2805
>       Longitude_VISerature = 11220
>       Longitude = 2805
>       DIM_012 = 0
> --More--
> DIM_013 = 0
>       DIM_014 = 0
>       DIM_015 = 0
>       DIM_016 = 0
>       DIM_017 = 0
>       DIM_018 = 0
>    variables:
>       integer GeoX ( Longitude )
>          CLASS :    DIMENSION_SCALE
>          REFERENCE_LIST :    <ARRAY of 0 elements>
>
>       integer GeoX1 ( Longitude_WVISmperature )
>          CLASS :    DIMENSION_SCALE
>          REFERENCE_LIST :    <ARRAY of 0 elements>
>
>       integer GeoX2 ( Longitude_VISerature )
>          CLASS :    DIMENSION_SCALE
>          REFERENCE_LIST :    <ARRAY of 0 elements>
>
>       integer GeoY ( Latitude )
>          CLASS :    DIMENSION_SCALE
>          REFERENCE_LIST :    <ARRAY of 0 elements>
>
>       integer GeoY1 ( Latitude_WV )
>          CLASS :    DIMENSION_SCALE
>          REFERENCE_LIST :    <ARRAY of 0 elements>
>
>       integer GeoY2 ( Latitude_VIS )
>          CLASS :    DIMENSION_SCALE
>          REFERENCE_LIST :    <ARRAY of 0 elements>
>
>       integer GreyCount ( )
>          CLASS :    DIMENSION_SCALE
>          REFERENCE_LIST :    <ARRAY of 0 elements>
>
>       ushort IMG_MIR ( time, Latitude, Longitude )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    1023
>          bandwidth :    0.2
> bits_per_pixel :    10
>          central_wavelength :    3.9313
>          coordinates :    time Latitude Longitude
>          invert :    true Latitude Longitude
>          lab_radiance_add_offset :    -0.00530575
>          lab_radiance_quad :       0
>          lab_radiance_scale_factor :    0.000316155
>          long_name :    Middle Infrared Countde
>          online_radiance_add_offset :    -0.00531338
>          online_radiance_quad :    -2.68784e-14
>          online_radiance_scale_factor :    0.000318073
>          radiance_units :    mW.cm-2.sr-1.micron-1de
>          resolution :     4
>          resolution_unit :    km.cm-2.sr-1.micron-1de
>          wavelength_unit :    micron2.sr-1.micron-1de
>
>       float IMG_MIR_RADIANCE ( )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    999
>          invert :    trueon2.sr-1.micron-1de
>          long_name :    Middle Infrared Radiance
>          units :    mW.cm-2.sr-1.micron-1nce
>
>       float IMG_MIR_TEMP ( )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    999
>          invert :    truem-2.sr-1.micron-1nce
>          long_name :    Middle Infrared Brightness Temperature
>          units :    Kiddle Infrared Brightness Temperature
>
>       ushort IMG_SWIR ( time, Latitude_VIS, Longitude_VISerature )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    0
>          bandwidth :    0.15
>          bits_per_pixel :    10
>          central_wavelength :    1.625
>          coordinates :    time Latitude_VIS Longitude_VISerature
>          invert :    falseLatitude_VIS Longitude_VISerature
> --More--
>  invert :    falseLatitude_VIS Longitude_VISerature
>          lab_radiance_add_offset :    -0.172166
>          lab_radiance_quad :       0
>          lab_radiance_scale_factor :    0.007835
>          long_name :    Shortwave Infrared Countude_VISerature
>          online_radiance_add_offset :    -0.172166
>          online_radiance_quad :       0
>          online_radiance_scale_factor :    0.007835
>          radiance_units :    mW.cm-2.sr-1.micron-1untude_VISerature
>          resolution :     1
>          resolution_unit :    km.cm-2.sr-1.micron-1untude_VISerature
>          wavelength_unit :    micron2.sr-1.micron-1untude_VISerature
>
>       float IMG_SWIR_RADIANCE ( )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    999
>          invert :    falsen2.sr-1.micron-1untude_VISerature
>          long_name :    Shortwave Infrared Radiance_VISerature
>          units :    mW.cm-2.sr-1.micron-1diance_VISerature
>
>       ushort IMG_TIR1 ( time, Latitude, Longitude )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    1023
>          bandwidth :     1
>          bits_per_pixel :    10
>          central_wavelength :    10.8288
>          coordinates :    time Latitude Longitudeance_VISerature
>          invert :    true Latitude Longitudeance_VISerature
>          lab_radiance_add_offset :    -0.166517
>          lab_radiance_quad :    -4.4237e-07
>          lab_radiance_scale_factor :    0.00232158
>          long_name :    Thermal Infrared1 Countance_VISerature
>          online_radiance_add_offset :    -0.160677
>          online_radiance_quad :    -4.29137e-07
>          online_radiance_scale_factor :    0.00232855
>          radiance_units :    mW.cm-2.sr-1.micron-1ntance_VISerature
>          resolution :     4
>          resolution_unit :    km.cm-2.sr-1.micron-1ntance_VISerature
>          wavelength_unit :    micron2.sr-1.micron-1ntance_VISerature
> --More--
> float IMG_TIR1_RADIANCE ( )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    999
>          invert :    trueon2.sr-1.micron-1ntance_VISerature
>          long_name :    Thermal Infrared1 Radiancee_VISerature
>          units :    mW.cm-2.sr-1.micron-1iancee_VISerature
>
>       float IMG_TIR1_TEMP ( )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    999
>          invert :    truem-2.sr-1.micron-1iancee_VISerature
>          long_name :    Thermal Infrared1 Brightness Temperature
>          units :    Khermal Infrared1 Brightness Temperature
>
>       ushort IMG_TIR2 ( time, Latitude, Longitude )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    1023
>          bandwidth :     1
>          bits_per_pixel :    10
>          central_wavelength :    11.9593
>          coordinates :    time Latitude Longitudetness Temperature
>          invert :    true Latitude Longitudetness Temperature
>          lab_radiance_add_offset :    -0.131206
>          lab_radiance_quad :    -3.73059e-07
>          lab_radiance_scale_factor :    0.00203049
>          long_name :    Thermal Infrared2 Counttness Temperature
>          online_radiance_add_offset :    -0.12046
>          online_radiance_quad :    -3.29754e-07
>          online_radiance_scale_factor :    0.00201267
>          radiance_units :    mW.cm-2.sr-1.micron-1nttness Temperature
>          resolution :     4
>          resolution_unit :    km.cm-2.sr-1.micron-1nttness Temperature
>          wavelength_unit :    micron2.sr-1.micron-1nttness Temperature
>
>       float IMG_TIR2_RADIANCE ( )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    999
> invert :    trueon2.sr-1.micron-1nttness Temperature
>          long_name :    Thermal Infrared2 Radiancess Temperature
>          units :    mW.cm-2.sr-1.micron-1iancess Temperature
>
>       float IMG_TIR2_TEMP ( )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    999
>          invert :    truem-2.sr-1.micron-1iancess Temperature
>          long_name :    Thermal Infrared2 Brightness Temperature
>          units :    Khermal Infrared2 Brightness Temperature
>
>       ushort IMG_VIS ( time, Latitude_VIS, Longitude_VISerature )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    0
>          bandwidth :    0.25
>          bits_per_pixel :    10
>          central_wavelength :    0.65
>          coordinates :    time Latitude_VIS Longitude_VISmperature
>          invert :    falseLatitude_VIS Longitude_VISmperature
>          lab_radiance_add_offset :    -1.85891
>          lab_radiance_quad :       0
>          lab_radiance_scale_factor :    0.0630857
>          long_name :    Visible Count_VIS Longitude_VISmperature
>          online_radiance_add_offset :    -1.85891
>          online_radiance_quad :       0
>          online_radiance_scale_factor :    0.0630857
>          radiance_units :    mW.cm-2.sr-1.micron-1gitude_VISmperature
>          resolution :     1
>          resolution_unit :    km.cm-2.sr-1.micron-1gitude_VISmperature
>          wavelength_unit :    micron2.sr-1.micron-1gitude_VISmperature
>
>       float IMG_VIS_ALBEDO ( )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          invert :    falsen2.sr-1.micron-1gitude_VISmperature
>          long_name :    Visible Albedoicron-1gitude_VISmperature
>          units :    %isible Albedoicron-1gitude_VISmperature
>
>       float IMG_VIS_RADIANCE ( )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
> --More--
> DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    999
>          invert :    falsele Albedoicron-1gitude_VISmperature
>          long_name :    Visible Radianceron-1gitude_VISmperature
>          units :    mW.cm-2.sr-1.micron-1gitude_VISmperature
>
>       ushort IMG_WV ( time, Latitude_WV, Longitude_WVISmperature )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    1023
>          bandwidth :    0.6
>          bits_per_pixel :    10
>          central_wavelength :    6.8841
>          coordinates :    time Latitude_WV Longitude_WVISmperature
>          invert :    true Latitude_WV Longitude_WVISmperature
>          lab_radiance_add_offset :    -0.0406098
>          lab_radiance_quad :    -2.38628e-07
>          lab_radiance_scale_factor :    0.00121532
>          long_name :    Water Vapor CountLongitude_WVISmperature
>          online_radiance_add_offset :    -0.0629506
>          online_radiance_quad :    -2.13838e-07
>          online_radiance_scale_factor :    0.00124276
>          radiance_units :    mW.cm-2.sr-1.micron-1itude_WVISmperature
>          resolution :     8
>          resolution_unit :    km.cm-2.sr-1.micron-1itude_WVISmperature
>          wavelength_unit :    micron2.sr-1.micron-1itude_WVISmperature
>
>       float IMG_WV_RADIANCE ( )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    999
>          invert :    trueon2.sr-1.micron-1itude_WVISmperature
>          long_name :    Water Vapor Radiance1itude_WVISmperature
>          units :    mW.cm-2.sr-1.micron-1itude_WVISmperature
>
>       float IMG_WV_TEMP ( )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    999
>          invert :    truem-2.sr-1.micron-1itude_WVISmperature
>          long_name :    Water Vapor Brightness Temperaturerature
>          units :    Kater Vapor Brightness Temperaturerature
> --More--
> long_name :    Water Vapor Brightness Temperaturerature
>          units :    Kater Vapor Brightness Temperaturerature
>
>       short Latitude ( Latitude, Longitude )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    32767
>          add_offset :     0
>          long_name :    latitudepor Brightness Temperaturerature
>          scale_factor :    0.01
>          units :    degrees_northrightness Temperaturerature
>
>       integer Latitude_VIS ( Latitude_VIS, Longitude_VISerature )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    327670
>          add_offset :     0
>          long_name :    latitudenorthrightness Temperaturerature
>          scale_factor :    0.001
>          units :    degrees_northrightness Temperaturerature
>
>       short Latitude_WV ( Latitude_WV, Longitude_WVISmperature )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    32767
>          add_offset :     0
>          long_name :    latitudenorthrightness Temperaturerature
>          scale_factor :    0.01
>          units :    degrees_northrightness Temperaturerature
>
>       short Longitude ( Latitude, Longitude )
>          DIMENSION_LIST :    <ARRAY of 0 elements>
>          _FillValue :    32767
>          add_offset :     0
>          long_name :    longitudeorthrightness Temperaturerature
>          scale_factor :    0.01
>          units :    degrees_easthrightness Temperaturerature
>
>
>
> [mcbng at localhost IMD-h5files]$ ncl test_imgl1b.ncl
>  Copyright (C) 1995-2015 - All Rights Reserved
>  University Corporation for Atmospheric Research
>  NCAR Command Language Version 6.3.0
>  The use of this software is governed by a License Agreement.
>  See http://www.ncl.ucar.edu/ for more details.
> fatal:["FileSupport.c":3731]:_NclFindFileExt: Requested file
> <./3DIMG_23APR2015_1200_L1B_STD.h5> or <./3DIMG_23APR2015_1200_L1B_STD>
> does not exist
>
> fatal:["FileSupport.c":4159]:(./3DIMG_23APR2015_1200_L1B_STD.h5) has no
> file extension, can't determine type of file to open
> fatal:file (f) isn't defined
> fatal:["Execute.c":8575]:Execute: Error occurred at or near line 8 in file
> test_imgl1b.ncl
>
> [mcbng at localhost IMD-h5files]$ vi test_imgl1b.ncl
> [mcbng at localhost IMD-h5files]$
>
> Geeta.
>
> _______________________________________________
> ncl-talk mailing list
> ncl-talk at ucar.edu
> List instructions, subscriber options, unsubscribe:
> http://mailman.ucar.edu/mailman/listinfo/ncl-talk
>
>
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