[ncl-install] Install Troubleshooting
Kevin Hallock
hallock at ucar.edu
Mon Sep 16 14:17:43 MDT 2019
Hi Jonathan,
I’m sorry to hear you’re having trouble getting NCL running.
Based on the error messages, I think you may need to install XQuartz (X11 window server for Mac): https://www.xquartz.org/ <https://www.xquartz.org/>
I hope this helps,
Kevin
> On Sep 16, 2019, at 11:57 AM, Jonathan Chriest via ncl-install <ncl-install at ucar.edu> wrote:
>
> Hello,
>
> I am having trouble installing NCL on my Mac. I receive the following errors:
>
> (ncl_stable) Jonathans-iMac:~ jonathanchriest$ ncl -V
> dyld: Library not loaded: /opt/X11/lib/libcairo.2.dylib
> Referenced from: //anaconda3/envs/ncl_stable/bin/ncl
> Reason: image not found
> Abort trap: 6
>
> (ncl_stable) Jonathans-iMac:~ jonathanchriest$ ncl $NCARG_ROOT/lib/ncarg/nclex/nug/NUG_multi_timeseries.ncl
> dyld: Library not loaded: /opt/X11/lib/libcairo.2.dylib
> Referenced from: //anaconda3/envs/ncl_stable/bin/ncl
> Reason: image not found
> Abort trap: 6
>
> Output from suggested commands:
>
> (ncl_stable) Jonathans-iMac:~ jonathanchriest$ conda list -n ncl_stable
> # packages in environment at //anaconda3/envs/ncl_stable:
> #
> # Name Version Build Channel
> boost-cpp 1.70.0 h75728bb_2 conda-forge
> bzip2 1.0.8 h01d97ff_1 conda-forge
> ca-certificates 2019.9.11 hecc5488_0 conda-forge
> cairo 1.16.0 he1c11cd_1002 conda-forge
> cfitsio 3.470 h84d2f63_2 conda-forge
> curl 7.65.3 h22ea746_0 conda-forge
> esmf 7.1.0 h963e782_1008 conda-forge
> expat 2.2.5 h6de7cb9_1003 conda-forge
> fontconfig 2.13.1 h6b1039f_1001 conda-forge
> freetype 2.10.0 h24853df_1 conda-forge
> freexl 1.0.5 h1de35cc_1002 conda-forge
> geos 3.7.2 h6de7cb9_2 conda-forge
> geotiff 1.5.1 h2bcb450_3 conda-forge
> gettext 0.19.8.1 h46ab8bc_1002 conda-forge
> giflib 5.1.7 h01d97ff_1 conda-forge
> glib 2.58.3 h9d45998_1002 conda-forge
> gsl 2.5 ha2d443c_1 conda-forge
> hdf4 4.2.13 hf3c6af0_1002 conda-forge
> hdf5 1.10.5 nompi_h15a436c_1103 conda-forge
> hdfeos2 2.20 h207910d_1000 conda-forge
> hdfeos5 5.1.16 h60f75e3_5 conda-forge
> icu 64.2 h6de7cb9_1 conda-forge
> jasper 1.900.1 h636a363_1006 conda-forge
> jpeg 9c h1de35cc_1001 conda-forge
> json-c 0.13.1 h1de35cc_1001 conda-forge
> kealib 1.4.10 h6659575_1005 conda-forge
> krb5 1.16.3 hcfa6398_1001 conda-forge
> libblas 3.8.0 12_openblas conda-forge
> libcblas 3.8.0 12_openblas conda-forge
> libcurl 7.65.3 h16faf7d_0 conda-forge
> libcxx 8.0.1 0 conda-forge
> libcxxabi 8.0.1 0 conda-forge
> libdap4 3.20.4 habf5908_0 conda-forge
> libedit 3.1.20170329 hcfe32e1_1001 conda-forge
> libffi 3.2.1 h6de7cb9_1006 conda-forge
> libgdal 3.0.1 h61e1f9c_8 conda-forge
> libgfortran 4.0.0 2 conda-forge
> libiconv 1.15 h01d97ff_1005 conda-forge
> libkml 1.3.0 hed7d534_1010 conda-forge
> libnetcdf 4.6.2 h1a02027_1003 conda-forge
> libopenblas 0.3.7 h4bb4525_1 conda-forge
> libpng 1.6.37 h2573ce8_0 conda-forge
> libpq 11.5 h756f0eb_1 conda-forge
> libspatialite 4.3.0a hd0a3780_1030 conda-forge
> libssh2 1.8.2 hcdc9a53_2 conda-forge
> libtiff 4.0.10 hd08fb8f_1003 conda-forge
> libxml2 2.9.9 h12c6b28_5 conda-forge
> llvm-openmp 8.0.1 h770b8ee_0 conda-forge
> lz4-c 1.8.3 h6de7cb9_1001 conda-forge
> mpi 1.0 mpich conda-forge
> mpich 3.3.1 hfcebdee_0 conda-forge
> ncl 6.6.2 hed7e8b7_10 conda-forge
> ncurses 6.1 h0a44026_1002 conda-forge
> netcdf-fortran 4.4.5 h1993a31_1004 conda-forge
> openjpeg 2.3.1 hdc36067_1 conda-forge
> openmp 8.0.1 0 conda-forge
> openssl 1.1.1c h01d97ff_0 conda-forge
> pcre 8.41 h0a44026_1003 conda-forge
> pixman 0.38.0 h01d97ff_1003 conda-forge
> poppler 0.67.0 hd5eb092_7 conda-forge
> poppler-data 0.4.9 1 conda-forge
> postgresql 11.5 h25afefd_1 conda-forge
> proj4 6.1.1 hca663eb_1 conda-forge
> readline 8.0 hcfe32e1_0 conda-forge
> sqlite 3.29.0 hb7d70f7_1 conda-forge
> tbb 2018.0.5 h2d50403_0 conda-forge
> tiledb 1.6.2 h4f44bfb_1 conda-forge
> tk 8.6.9 h2573ce8_1003 conda-forge
> tzcode 2019a h01d97ff_1002 conda-forge
> udunits2 2.2.27.6 h776b7f1_1001 conda-forge
> xerces-c 3.2.2 hbda6038_1004 conda-forge
> xz 5.2.4 h1de35cc_1001 conda-forge
> zlib 1.2.11 h01d97ff_1006 conda-forge
> zstd 1.4.0 ha9f0a20_0 conda-forge
>
>
> (ncl_stable) Jonathans-iMac:~ jonathanchriest$ conda --version
> conda 4.7.12
>
>
> (ncl_stable) Jonathans-iMac:~ jonathanchriest$ which ncl
> //anaconda3/envs/ncl_stable/bin/ncl
>
> (ncl_stable) Jonathans-iMac:~ jonathanchriest$ ncl -V
> dyld: Library not loaded: /opt/X11/lib/libcairo.2.dylib
> Referenced from: //anaconda3/envs/ncl_stable/bin/ncl
> Reason: image not found
> Abort trap: 6
>
> (ncl_stable) Jonathans-iMac:~ jonathanchriest$ env | grep NCARG
> NCARG_ROOT=//anaconda3/envs/ncl_stable
>
> Please let me know if you can see why is isn't working the way it is supposed to. Thank you!
>
> Jonathan
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