[Met_help] [rt.rap.ucar.edu #94119] History for Model Evaluation Tools (METv.8.1.2) Configuration
John Halley Gotway via RT
met_help at ucar.edu
Thu Apr 2 14:12:12 MDT 2020
----------------------------------------------------------------
Initial Request
----------------------------------------------------------------
Hello,
I'm having difficulties configuring MET properly. The details of my
attempted configuration are below...
Linux + GNU compilers <- chosen compiler options
Thus, I created the following .bashrc environment:
*export CXX=/apps2/gcc/4.8.2/bin/g++*
*export F77=/apps2/gcc/4.8.2/bin/gfortran*
*export CC=/apps2/gcc/4.8.2/bin/gcc*
*export MET_NETCDF=/apps2/netcdf/4.2-fortran*
*export MET_HDF5=/apps2/hdf5/1.8.19*
*export MET_BUFR=/apps2/bufrlib/11.0.0*
*export MET_GSL=/apps2/gsl/2.4*
*export MET_GRIB2INC=/apps2/grib2/g2clib-1.4.0*
*export MET_GRIB2LIB=/apps2/grib2/g2clib-1.4.0*
*export MET_PYTHON_CC='-I/apps2/python/2.7.10-gcc/include/python2.7'*
*export MET_PYTHON_LD='-L/apps2/python/2.7.10-gcc/lib/ -lpython2.7'*
*export MET_HDF=/apps2/hdf4/4.2.9*
*export MET_HDFEOS=/apps2/hdf-eos5/5.1.16-h5pcc/*
*export MET_CAIRO=/apps2/cairo/1.14.2*
*export MET_FREETYPE=/apps2/freetype/2.9.1*
*export MET_FONT_DIR=/shared/airmg/MIKE/LIBRARIES/fonts*
I have no problem when I try to configure METv8.1.2,
./configure --prefix=`pwd` --enable-grib2 --enable-python \
--enable-modis --enable-mode_graphics --enable-lidar2nc
But I receive the following error when I try to 'make install >&
make_install.log' the configuration file.
data_plane_util.cc: In function ‘void smooth_field(const DataPlane&,
DataPlane&, InterpMthd, int, GridTemplateFactory::GridTemplates, double,
double, double)’:
data_plane_util.cc:164:64: error: ‘interp_gaussian_dp’ was not declared in
this scope
interp_gaussian_dp(smooth_dp, gaussian_radius, gaussian_dx);
^
Can you help me identify the problem? I'm still working on it at the moment.
Thanks in advance!
--
*Sincerely,*
Michael S. Walters | B.S. Atmospheric Science
Graduate Research Assistant
Master's Student | Civil and Environmental Engineering
261 Glenbrook Road. Storrs, CT, 06269-3037
University of Connecticut
Phone: 774-254-6608
----------------------------------------------------------------
Complete Ticket History
----------------------------------------------------------------
Subject: Model Evaluation Tools (METv.8.1.2) Configuration
From: David Fillmore
Time: Fri Feb 07 15:04:04 2020
Hi Michael -
Let me see if I can replicate your build issue with MET 8.1.2.
Can you also send you config.log file?
I want to check the include search paths.
thanks,
David
On Fri, Feb 7, 2020 at 2:10 PM Michael Walters via RT
<met_help at ucar.edu>
wrote:
>
> Fri Feb 07 14:10:52 2020: Request 94119 was acted upon.
> Transaction: Ticket created by michael.s.walters at uconn.edu
> Queue: met_help
> Subject: Model Evaluation Tools (METv.8.1.2) Configuration
> Owner: Nobody
> Requestors: michael.s.walters at uconn.edu
> Status: new
> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=94119 >
>
>
> Hello,
>
> I'm having difficulties configuring MET properly. The details of my
> attempted configuration are below...
>
> Linux + GNU compilers <- chosen compiler options
>
> Thus, I created the following .bashrc environment:
> *export CXX=/apps2/gcc/4.8.2/bin/g++*
> *export F77=/apps2/gcc/4.8.2/bin/gfortran*
> *export CC=/apps2/gcc/4.8.2/bin/gcc*
> *export MET_NETCDF=/apps2/netcdf/4.2-fortran*
> *export MET_HDF5=/apps2/hdf5/1.8.19*
> *export MET_BUFR=/apps2/bufrlib/11.0.0*
> *export MET_GSL=/apps2/gsl/2.4*
> *export MET_GRIB2INC=/apps2/grib2/g2clib-1.4.0*
> *export MET_GRIB2LIB=/apps2/grib2/g2clib-1.4.0*
> *export MET_PYTHON_CC='-I/apps2/python/2.7.10-
gcc/include/python2.7'*
> *export MET_PYTHON_LD='-L/apps2/python/2.7.10-gcc/lib/ -lpython2.7'*
> *export MET_HDF=/apps2/hdf4/4.2.9*
> *export MET_HDFEOS=/apps2/hdf-eos5/5.1.16-h5pcc/*
> *export MET_CAIRO=/apps2/cairo/1.14.2*
> *export MET_FREETYPE=/apps2/freetype/2.9.1*
> *export MET_FONT_DIR=/shared/airmg/MIKE/LIBRARIES/fonts*
>
> I have no problem when I try to configure METv8.1.2,
> ./configure --prefix=`pwd` --enable-grib2 --enable-python \
> --enable-modis --enable-mode_graphics --enable-
lidar2nc
>
> But I receive the following error when I try to 'make install >&
> make_install.log' the configuration file.
> data_plane_util.cc: In function ‘void smooth_field(const DataPlane&,
> DataPlane&, InterpMthd, int, GridTemplateFactory::GridTemplates,
double,
> double, double)’:
> data_plane_util.cc:164:64: error: ‘interp_gaussian_dp’ was not
declared in
> this scope
> interp_gaussian_dp(smooth_dp, gaussian_radius, gaussian_dx);
> ^
>
> Can you help me identify the problem? I'm still working on it at the
> moment.
>
> Thanks in advance!
>
> --
>
> *Sincerely,*
>
> Michael S. Walters | B.S. Atmospheric Science
> Graduate Research Assistant
> Master's Student | Civil and Environmental Engineering
> 261 Glenbrook Road. Storrs, CT, 06269-3037
> University of Connecticut
> Phone: 774-254-6608
>
>
------------------------------------------------
Subject: Model Evaluation Tools (METv.8.1.2) Configuration
From: Michael Walters
Time: Fri Feb 07 15:15:20 2020
Absolutely, David.
I attached config.log to this email.
Thanks again!
On Fri, Feb 7, 2020 at 5:04 PM David Fillmore via RT
<met_help at ucar.edu>
wrote:
> Hi Michael -
> Let me see if I can replicate your build issue with MET 8.1.2.
> Can you also send you config.log file?
> I want to check the include search paths.
> thanks,
> David
>
> On Fri, Feb 7, 2020 at 2:10 PM Michael Walters via RT
<met_help at ucar.edu>
> wrote:
>
> >
> > Fri Feb 07 14:10:52 2020: Request 94119 was acted upon.
> > Transaction: Ticket created by michael.s.walters at uconn.edu
> > Queue: met_help
> > Subject: Model Evaluation Tools (METv.8.1.2) Configuration
> > Owner: Nobody
> > Requestors: michael.s.walters at uconn.edu
> > Status: new
> > Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=94119 >
> >
> >
> > Hello,
> >
> > I'm having difficulties configuring MET properly. The details of
my
> > attempted configuration are below...
> >
> > Linux + GNU compilers <- chosen compiler options
> >
> > Thus, I created the following .bashrc environment:
> > *export CXX=/apps2/gcc/4.8.2/bin/g++*
> > *export F77=/apps2/gcc/4.8.2/bin/gfortran*
> > *export CC=/apps2/gcc/4.8.2/bin/gcc*
> > *export MET_NETCDF=/apps2/netcdf/4.2-fortran*
> > *export MET_HDF5=/apps2/hdf5/1.8.19*
> > *export MET_BUFR=/apps2/bufrlib/11.0.0*
> > *export MET_GSL=/apps2/gsl/2.4*
> > *export MET_GRIB2INC=/apps2/grib2/g2clib-1.4.0*
> > *export MET_GRIB2LIB=/apps2/grib2/g2clib-1.4.0*
> > *export MET_PYTHON_CC='-I/apps2/python/2.7.10-
gcc/include/python2.7'*
> > *export MET_PYTHON_LD='-L/apps2/python/2.7.10-gcc/lib/
-lpython2.7'*
> > *export MET_HDF=/apps2/hdf4/4.2.9*
> > *export MET_HDFEOS=/apps2/hdf-eos5/5.1.16-h5pcc/*
> > *export MET_CAIRO=/apps2/cairo/1.14.2*
> > *export MET_FREETYPE=/apps2/freetype/2.9.1*
> > *export MET_FONT_DIR=/shared/airmg/MIKE/LIBRARIES/fonts*
> >
> > I have no problem when I try to configure METv8.1.2,
> > ./configure --prefix=`pwd` --enable-grib2 --enable-python \
> > --enable-modis --enable-mode_graphics --enable-
lidar2nc
> >
> > But I receive the following error when I try to 'make install >&
> > make_install.log' the configuration file.
> > data_plane_util.cc: In function ‘void smooth_field(const
DataPlane&,
> > DataPlane&, InterpMthd, int, GridTemplateFactory::GridTemplates,
double,
> > double, double)’:
> > data_plane_util.cc:164:64: error: ‘interp_gaussian_dp’ was not
declared
> in
> > this scope
> > interp_gaussian_dp(smooth_dp, gaussian_radius, gaussian_dx);
> > ^
> >
> > Can you help me identify the problem? I'm still working on it at
the
> > moment.
> >
> > Thanks in advance!
> >
> > --
> >
> > *Sincerely,*
> >
> > Michael S. Walters | B.S. Atmospheric Science
> > Graduate Research Assistant
> > Master's Student | Civil and Environmental Engineering
> > 261 Glenbrook Road. Storrs, CT, 06269-3037
> > University of Connecticut
> > Phone: 774-254-6608
> >
> >
>
>
--
*Sincerely,*
Michael S. Walters | B.S. Atmospheric Science
Graduate Research Assistant
Master's Student | Civil and Environmental Engineering
261 Glenbrook Road. Storrs, CT, 06269-3037
University of Connecticut
Phone: 774-254-6608
------------------------------------------------
Subject: Model Evaluation Tools (METv.8.1.2) Configuration
From: Michael Walters
Time: Sun Feb 09 20:06:10 2020
Hello again,
I added a patch (met-8.0_bugfix.tar.gz) which wasn't required (that
I'm
aware of) to configure METv8.1.2. I removed the patch and recompiled.
Unfortunately, I receive a new error.
"nc_utils.h:22:18: fatal eror: netcdf: No such file or directory
#include
<netcdf>"
Here are my files in the 'include' directory (netcdf 4.2-fortran)...
[image: image.png]
Here are my files in the 'lib' directory (netcdf 4.2-fortran) ...
[image: image.png]
Changes to the exported libraries...
[image: image.png]
I attached the new 'config.log' and the 'make_install.log' to this
email.
On Fri, Feb 7, 2020 at 5:15 PM Michael Walters
<michael.s.walters at uconn.edu>
wrote:
> Absolutely, David.
>
> I attached config.log to this email.
>
> Thanks again!
>
> On Fri, Feb 7, 2020 at 5:04 PM David Fillmore via RT
<met_help at ucar.edu>
> wrote:
>
>> Hi Michael -
>> Let me see if I can replicate your build issue with MET 8.1.2.
>> Can you also send you config.log file?
>> I want to check the include search paths.
>> thanks,
>> David
>>
>> On Fri, Feb 7, 2020 at 2:10 PM Michael Walters via RT
<met_help at ucar.edu>
>> wrote:
>>
>> >
>> > Fri Feb 07 14:10:52 2020: Request 94119 was acted upon.
>> > Transaction: Ticket created by michael.s.walters at uconn.edu
>> > Queue: met_help
>> > Subject: Model Evaluation Tools (METv.8.1.2) Configuration
>> > Owner: Nobody
>> > Requestors: michael.s.walters at uconn.edu
>> > Status: new
>> > Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=94119 >
>> >
>> >
>> > Hello,
>> >
>> > I'm having difficulties configuring MET properly. The details of
my
>> > attempted configuration are below...
>> >
>> > Linux + GNU compilers <- chosen compiler options
>> >
>> > Thus, I created the following .bashrc environment:
>> > *export CXX=/apps2/gcc/4.8.2/bin/g++*
>> > *export F77=/apps2/gcc/4.8.2/bin/gfortran*
>> > *export CC=/apps2/gcc/4.8.2/bin/gcc*
>> > *export MET_NETCDF=/apps2/netcdf/4.2-fortran*
>> > *export MET_HDF5=/apps2/hdf5/1.8.19*
>> > *export MET_BUFR=/apps2/bufrlib/11.0.0*
>> > *export MET_GSL=/apps2/gsl/2.4*
>> > *export MET_GRIB2INC=/apps2/grib2/g2clib-1.4.0*
>> > *export MET_GRIB2LIB=/apps2/grib2/g2clib-1.4.0*
>> > *export MET_PYTHON_CC='-I/apps2/python/2.7.10-
gcc/include/python2.7'*
>> > *export MET_PYTHON_LD='-L/apps2/python/2.7.10-gcc/lib/
-lpython2.7'*
>> > *export MET_HDF=/apps2/hdf4/4.2.9*
>> > *export MET_HDFEOS=/apps2/hdf-eos5/5.1.16-h5pcc/*
>> > *export MET_CAIRO=/apps2/cairo/1.14.2*
>> > *export MET_FREETYPE=/apps2/freetype/2.9.1*
>> > *export MET_FONT_DIR=/shared/airmg/MIKE/LIBRARIES/fonts*
>> >
>> > I have no problem when I try to configure METv8.1.2,
>> > ./configure --prefix=`pwd` --enable-grib2 --enable-python \
>> > --enable-modis --enable-mode_graphics --enable-
lidar2nc
>> >
>> > But I receive the following error when I try to 'make install >&
>> > make_install.log' the configuration file.
>> > data_plane_util.cc: In function ‘void smooth_field(const
DataPlane&,
>> > DataPlane&, InterpMthd, int, GridTemplateFactory::GridTemplates,
double,
>> > double, double)’:
>> > data_plane_util.cc:164:64: error: ‘interp_gaussian_dp’ was not
declared
>> in
>> > this scope
>> > interp_gaussian_dp(smooth_dp, gaussian_radius,
gaussian_dx);
>> > ^
>> >
>> > Can you help me identify the problem? I'm still working on it at
the
>> > moment.
>> >
>> > Thanks in advance!
>> >
>> > --
>> >
>> > *Sincerely,*
>> >
>> > Michael S. Walters | B.S. Atmospheric Science
>> > Graduate Research Assistant
>> > Master's Student | Civil and Environmental Engineering
>> > 261 Glenbrook Road. Storrs, CT, 06269-3037
>> > University of Connecticut
>> > Phone: 774-254-6608
>> >
>> >
>>
>>
>
> --
>
> *Sincerely,*
>
> Michael S. Walters | B.S. Atmospheric Science
> Graduate Research Assistant
> Master's Student | Civil and Environmental Engineering
> 261 Glenbrook Road. Storrs, CT, 06269-3037
> University of Connecticut
> Phone: 774-254-6608
>
--
*Sincerely,*
Michael S. Walters | B.S. Atmospheric Science
Graduate Research Assistant
Master's Student | Civil and Environmental Engineering
261 Glenbrook Road. Storrs, CT, 06269-3037
University of Connecticut
Phone: 774-254-6608
------------------------------------------------
Subject: Model Evaluation Tools (METv.8.1.2) Configuration
From: David Fillmore
Time: Mon Feb 10 10:05:35 2020
Hi Michael -
Thanks for the additional information.
I should have a chance for a look this afternoon.
David
On Sun, Feb 9, 2020 at 8:06 PM Michael Walters via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=94119 >
>
> Hello again,
>
> I added a patch (met-8.0_bugfix.tar.gz) which wasn't required (that
I'm
> aware of) to configure METv8.1.2. I removed the patch and
recompiled.
> Unfortunately, I receive a new error.
> "nc_utils.h:22:18: fatal eror: netcdf: No such file or directory
#include
> <netcdf>"
>
> Here are my files in the 'include' directory (netcdf 4.2-fortran)...
> [image: image.png]
>
> Here are my files in the 'lib' directory (netcdf 4.2-fortran) ...
> [image: image.png]
>
> Changes to the exported libraries...
> [image: image.png]
>
> I attached the new 'config.log' and the 'make_install.log' to this
email.
>
> On Fri, Feb 7, 2020 at 5:15 PM Michael Walters <
> michael.s.walters at uconn.edu>
> wrote:
>
> > Absolutely, David.
> >
> > I attached config.log to this email.
> >
> > Thanks again!
> >
> > On Fri, Feb 7, 2020 at 5:04 PM David Fillmore via RT
<met_help at ucar.edu>
> > wrote:
> >
> >> Hi Michael -
> >> Let me see if I can replicate your build issue with MET 8.1.2.
> >> Can you also send you config.log file?
> >> I want to check the include search paths.
> >> thanks,
> >> David
> >>
> >> On Fri, Feb 7, 2020 at 2:10 PM Michael Walters via RT <
> met_help at ucar.edu>
> >> wrote:
> >>
> >> >
> >> > Fri Feb 07 14:10:52 2020: Request 94119 was acted upon.
> >> > Transaction: Ticket created by michael.s.walters at uconn.edu
> >> > Queue: met_help
> >> > Subject: Model Evaluation Tools (METv.8.1.2) Configuration
> >> > Owner: Nobody
> >> > Requestors: michael.s.walters at uconn.edu
> >> > Status: new
> >> > Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=94119
> >
> >> >
> >> >
> >> > Hello,
> >> >
> >> > I'm having difficulties configuring MET properly. The details
of my
> >> > attempted configuration are below...
> >> >
> >> > Linux + GNU compilers <- chosen compiler options
> >> >
> >> > Thus, I created the following .bashrc environment:
> >> > *export CXX=/apps2/gcc/4.8.2/bin/g++*
> >> > *export F77=/apps2/gcc/4.8.2/bin/gfortran*
> >> > *export CC=/apps2/gcc/4.8.2/bin/gcc*
> >> > *export MET_NETCDF=/apps2/netcdf/4.2-fortran*
> >> > *export MET_HDF5=/apps2/hdf5/1.8.19*
> >> > *export MET_BUFR=/apps2/bufrlib/11.0.0*
> >> > *export MET_GSL=/apps2/gsl/2.4*
> >> > *export MET_GRIB2INC=/apps2/grib2/g2clib-1.4.0*
> >> > *export MET_GRIB2LIB=/apps2/grib2/g2clib-1.4.0*
> >> > *export MET_PYTHON_CC='-I/apps2/python/2.7.10-
gcc/include/python2.7'*
> >> > *export MET_PYTHON_LD='-L/apps2/python/2.7.10-gcc/lib/
-lpython2.7'*
> >> > *export MET_HDF=/apps2/hdf4/4.2.9*
> >> > *export MET_HDFEOS=/apps2/hdf-eos5/5.1.16-h5pcc/*
> >> > *export MET_CAIRO=/apps2/cairo/1.14.2*
> >> > *export MET_FREETYPE=/apps2/freetype/2.9.1*
> >> > *export MET_FONT_DIR=/shared/airmg/MIKE/LIBRARIES/fonts*
> >> >
> >> > I have no problem when I try to configure METv8.1.2,
> >> > ./configure --prefix=`pwd` --enable-grib2 --enable-python \
> >> > --enable-modis --enable-mode_graphics --enable-
lidar2nc
> >> >
> >> > But I receive the following error when I try to 'make install
>&
> >> > make_install.log' the configuration file.
> >> > data_plane_util.cc: In function ‘void smooth_field(const
DataPlane&,
> >> > DataPlane&, InterpMthd, int,
GridTemplateFactory::GridTemplates,
> double,
> >> > double, double)’:
> >> > data_plane_util.cc:164:64: error: ‘interp_gaussian_dp’ was not
> declared
> >> in
> >> > this scope
> >> > interp_gaussian_dp(smooth_dp, gaussian_radius,
gaussian_dx);
> >> >
^
> >> >
> >> > Can you help me identify the problem? I'm still working on it
at the
> >> > moment.
> >> >
> >> > Thanks in advance!
> >> >
> >> > --
> >> >
> >> > *Sincerely,*
> >> >
> >> > Michael S. Walters | B.S. Atmospheric Science
> >> > Graduate Research Assistant
> >> > Master's Student | Civil and Environmental Engineering
> >> > 261 Glenbrook Road. Storrs, CT, 06269-3037
> >> > University of Connecticut
> >> > Phone: 774-254-6608
> >> >
> >> >
> >>
> >>
> >
> > --
> >
> > *Sincerely,*
> >
> > Michael S. Walters | B.S. Atmospheric Science
> > Graduate Research Assistant
> > Master's Student | Civil and Environmental Engineering
> > 261 Glenbrook Road. Storrs, CT, 06269-3037
> > University of Connecticut
> > Phone: 774-254-6608
> >
>
>
> --
>
> *Sincerely,*
>
> Michael S. Walters | B.S. Atmospheric Science
> Graduate Research Assistant
> Master's Student | Civil and Environmental Engineering
> 261 Glenbrook Road. Storrs, CT, 06269-3037
> University of Connecticut
> Phone: 774-254-6608
>
>
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