[ncl-talk] Error for cdc create
Karin Meier-Fleischer
meier-fleischer at dkrz.de
Sun Sep 14 02:17:59 MDT 2014
Hi,
The error message of cdo tells you that you don't have the permission to write into the current directory. Write the file into a directory where you have permission to. Thats it.
Bye
Karin
> Am 13.09.2014 um 15:00 schrieb "mamadoulamine.mbaye at ucad.edu.sn" <mamadoulamine.mbaye at ucad.edu.sn>:
>
> Hi Azizul,
>
> try to use others cdo commands (e.g ymonmean or yearmean) to see if it works.
>
> you can make a quick plot with ncview or ferret to see also the data.
> Regards,
>
> Mamadou
> De : azizul haque <haque.azizul320 at yahoo.com>
> Envoyé : samedi 13 septembre 2014 05:51
> À : mamadoulamine.mbaye at ucad.edu.sn; ncl-talk at ucar.edu
> Objet : Re: [ncl-talk] Error for cdc create
>
> Hi Mamadou,
> Thank you very much indeed for your quick response. I checked all downloaded files using ncdum and I assume files download is done properly.
> You can see a output of ncdum here. I really do not know what to do not. I have to do some very importance analysis this weekned.
>
> If possible please guide me
>
> Regards
> Azizul
> mac06:r1i1p1 ahaque$ ncdump -h pr_day_MPI-ESM-MR_rcp85_r1i1p1_20060101-21001231.nc | less
>
> :experiment_id = "rcp85" ;
> :source = "MPI-ESM-MR 2011; URL: http://svn.zmaw.de/svn/cosmos/branches/releases/mpi-esm-cmip5/src/mod; atmosphere: ECHAM6 (REV: 4936), T63L47; land: JSBACH (REV: 4936); ocean: MPIOM (REV: 4936), GR15L40; sea ice: 4936; marine bgc: HAMOCC (REV: 4936);" ;
> :model_id = "MPI-ESM-MR" ;
> :forcing = "GHG,Oz,SD,Sl,Vl,LU" ;
> :parent_experiment_id = "historical" ;
> :parent_experiment_rip = "r1i1p1" ;
> :branch_time = 56978. ;
> :contact = "cmip5-mpi-esm at dkrz.de" ;
> :history = "Sat Apr 19 10:33:27 2014: ncks -D 3 --fl_fmt=netcdf4_classic -L 5 --overwrite pr_day_MPI-ESM-MR_rcp85_r1i1p1_20060101-21001231.tmp.nc /Projects/CMIP5A//Daily/rcp85/MPI-ESM-MR//r1i1p1//pr_day_MPI-ESM-MR_rcp85_r1i1p1_20060101-21001231.nc\n",
> "Sat Apr 19 10:32:01 2014: ncrcat -D 3 --overwrite pr_day_MPI-ESM-MR_rcp85_r1i1p1_20060101-20091231.nc pr_day_MPI-ESM-MR_rcp85_r1i1p1_20100101-20191231.nc pr_day_MPI-ESM-MR_rcp85_r1i1p1_20200101-20291231.nc pr_day_MPI-ESM-MR_rcp85_r1i1p1_20300101-20391231.nc pr_day_MPI-ESM-MR_rcp85_r1i1p1_20400101-20491231.nc pr_day_MPI-ESM-MR_rcp85_r1i1p1_20500101-20591231.nc pr_day_MPI-ESM-MR_rcp85_r1i1p1_20600101-20691231.nc pr_day_MPI-ESM-MR_rcp85_r1i1p1_20700101-20791231.nc pr_day_MPI-ESM-MR_rcp85_r1i1p1_20800101-20891231.nc pr_day_MPI-ESM-MR_rcp85_r1i1p1_20900101-21001231.nc pr_day_MPI-ESM-MR_rcp85_r1i1p1_20060101-21001231.tmp.nc\n",
> "Model raw output postprocessing with modelling environment (IMDI) at DKRZ: URL: http://svn-mad.zmaw.de/svn/mad/Model/IMDI/trunk, REV: 3998 2011-11-14T17:28:10Z CMOR rewrote data to comply with CF standards and CMIP5 requirements." ;
> :references = "ECHAM6: n/a; JSBACH: Raddatz et al., 2007. Will the tropical land biosphere dominate the climate-carbon cycle feedback during the twenty first century? Climate Dynamics, 29, 565-574, doi 10.1007/s00382-007-0247-8; MPIOM: Marsland et al., 2003. The Max-Planck-Institute global ocean/sea ice model with orthogonal curvilinear coordinates. Ocean Modelling, 5, 91-127; HAMOCC: Technical Documentation, http://www.mpimet.mpg.de/fileadmin/models/MPIOM/HAMOCC5.1_TECHNICAL_REPORT.pdf;" ;
> :initialization_method = 1 ;
> :physics_version = 1 ;
> :tracking_id = "bfd476dc-f2be-4061-9184-6a0e7a55219b" ;
> :product = "output" ;
> :experiment = "RCP8.5" ;
> :frequency = "day" ;
> :creation_date = "2011-11-14T17:28:14Z" ;
> :Conventions = "CF-1.4" ;
> :project_id = "CMIP5" ;
> :table_id = "Table day (27 April 2011) 86d1558d99b6ed1e7a886ab3fd717b58" ;
> :title = "MPI-ESM-MR model output prepared for CMIP5 RCP8.5" ;
> :parent_experiment = "historical" ;
> :modeling_realm = "atmos" ;
> :realization = 1 ;
> :cmor_version = "2.6.0" ;
> :nco_openmp_thread_number = 1 ;
> :NCO = "4.4.0" ;
> }
>
>
>
> On Saturday, 13 September 2014, 6:36, "mamadoulamine.mbaye at ucad.edu.sn" <mamadoulamine.mbaye at ucad.edu.sn> wrote:
>
>
> Hi Azizul,
> could you verify if the file is correctly download.
> You can see also the cdo forum. https://code.zmaw.de/projects/cdo/boards
>
> Best Regards,
> Mamadou
> De : azizul haque <haque.azizul320 at yahoo.com>
> Envoyé : samedi 13 septembre 2014 05:18
> À : mamadoulamine.mbaye at ucad.edu.sn; ncl-talk at ucar.edu
> Objet : Re: [ncl-talk] Error for cdc create
>
> Hi Mamadou,
> Thanks. I tried according to your instruction and getting same problem. Earlier I extracted a couple of files using cdo selyear,1980/2000 command and it worked properly. But do not know what happened now. Pls guide me if possible.
> Regards
> Azizul
>
>
> On Saturday, 13 September 2014, 2:54, "mamadoulamine.mbaye at ucad.edu.sn" <mamadoulamine.mbaye at ucad.edu.sn> wrote:
>
>
> Hi Azizul,
> You can use cdo seldate,2080-01-01,2100-12-31 pr_day_CNRM-CM5_rcp85_r1i1p1_20060101-21001231.nc pr_day_CNRM-CM5_rcp85_r1i1p1_20800101-21001231.nc
> Permission denied: I think you don't have right administrator
> otherwise the netcdf version of your data is not built with your cdo
> Hope this helps
> Regards,
> Mamadou
> De : ncl-talk-bounces at ucar.edu <ncl-talk-bounces at ucar.edu> de la part de azizul haque <haque.azizul320 at yahoo.com>
> Envoyé : vendredi 12 septembre 2014 23:40
> À : ncl-talk at ucar.edu
> Objet : [ncl-talk] Error for cdc create
>
> Hi All,
> I try to extract 2080-2100 precipitation using CDO(cdo selyear,2080/2100 pr_day_CNRM-CM5_rcp85_r1i1p1_20060101-21001231.nc pr_day_CNRM-CM5_rcp85_r1i1p1_20800101-21001231.nc) in the linux environment and getting following error message
> ###########Error (cdf_create) : pr_day_CNRM-CM5_rcp85_r1i1p1_20800101-21001231.nc: Permission denied
> HDF5-DIAG: Error detected in HDF5 (1.8.13) thread 0:
> #000: H5T.c line 1766 in H5Tclose(): not a datatype
> major: Invalid arguments to routine
> minor: Inappropriate type
>
> Error (cdf_close) : NetCDF: HDF error###############
> Any suggestion is greatly appreciated
> Regards
> Azizul
>
>
>
>
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