[ncl-talk] ncrename 4.4.5 netCDF4 bug

[David Brown]

ncrename is part of the NCO package. It is not maintained or developed by
the NCL team. See the NCO home page at
http://nco.sourceforge.net/ for more information.


On Mon, Oct 6, 2014 at 5:44 PM, Sandra Lubker <sandra.j.lubker at noaa.gov>
wrote:

> ncrename -v latitude,lat deletes latitude values and metadata (SNOD.nc4
> attached).
>
>
> linux64 17:38 ncrename -D 5 -v latitude,lat SNOD.nc4
> ncrename: INFO nco_fl_open() reports nc__open() will request file buffer
> of default size
> ncrename: INFO nco_fl_open() reports nc__open() opened file with buffer
> size = 0 bytes
> ncrename: INFO Extended filetype of SNOD.nc4 is NC_FORMAT_HDF5, mode = 4097
> ncrename: TIMER Metadata setup and file layout before main loop took
> 0.00 s
> ncrename: Renamed variable 'latitude' to 'lat'
> ncrename: TIMER Wallclock-elapsed time for command is    0.01 s
>
>
> linux64 17:35 uname -a
> Linux linux64.psd.esrl.noaa.gov 2.6.32-431.23.3.el6.x86_64 #1 SMP Wed Jul
> 16 06:12:23 EDT 2014 x86_64 GNU/Linux
>
>
> linux64 17:35 ncrename -r
> NCO netCDF Operators version "4.4.5" last modified 2014/07/11 built Aug 29
> 2014 on linux64.psd.esrl.noaa.gov by root
> ncrename version 4.4.5
> Linked to netCDF library version 4.3.1.1, compiled Mar  5 2014 11:04:45
> Copyright (C) 1995--2014 Charlie Zender
> This program is part of NCO, the netCDF Operators.
> NCO is free software and comes with a BIG FAT KISS and ABOLUTELY NO
> WARRANTY
> You can redistribute and/or modify NCO under the terms of the
> GNU General Public License (GPL) Version 3 with exceptions described in
> the LICENSE file
> GPL: http://www.gnu.org/copyleft/gpl.html
> LICENSE: http://nco.cvs.sf.net/nco/nco/LICENSE
> Homepage: http://nco.sf.net
> User Guide: http://nco.sf.net/nco.html
> Configuration Option:   Active? Meaning or Reference:
> Check _FillValue        Yes     http://nco.sf.net/nco.html#mss_val
> Check missing_value     No      http://nco.sf.net/nco.html#mss_val
> DAP clients             Yes     http://nco.sf.net/nco.html#dap
> Debugging: Custom       No      Pedantic, bounds checking (slowest
> execution)
> Debugging: Symbols      No      Produce symbols for debuggers (e.g., dbx,
> gdb)
> GNU Scientific Library  Yes     http://nco.sf.net/nco.html#gsl
> HDF4 support            Unknown http://nco.sf.net/nco.html#hdf4
> Internationalization    No      http://nco.sf.net/nco.html#i18n
> (pre-alpha)
> MPI parallelization     No      http://nco.sf.net/nco.html#mpi (beta)
> netCDF3 64-bit files    Yes     http://nco.sf.net/nco.html#lfs
> netCDF4/HDF5 available  Yes     http://nco.sf.net/nco.html#nco4
> netCDF4/HDF5 enabled    Yes     http://nco.sf.net/nco.html#nco4
> OpenMP SMP threading    No      http://nco.sf.net/nco.html#omp
> Optimization: run-time  No      Fastest execution possible (slowest
> compilation)
> Parallel netCDF3        No      http://nco.sf.net/nco.html#pnetcdf
> (pre-alpha)
> Regular Expressions     Yes     http://nco.sf.net/nco.html#rx
> Shared libraries built  No      Small, dynamically linked executables
> Static libraries built  Yes     Large executables with private namespaces
> UDUnits conversions     Yes     http://nco.sf.net/nco.html#udunits
> UDUnits2 conversions    Yes     http://nco.sf.net/nco.html#udunits
>
> UHS Registration. Go Trojans!
>
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