[Wrf-users] Installation of HDF5 and netCDF in Ubuntu OS

[Kudsy, M]

I think Ubuntu has the package, netcdf-fortran and netcdf-fortran-devel.
Regards
Mahally

On Thu, Nov 12, 2015 at 11:56 PM, Dominikus Heinzeller <climbfuji at ymail.com>
wrote:

> [image: Boxbe] <https://www.boxbe.com/overview> This message is eligible
> for Automatic Cleanup! (climbfuji at ymail.com) Add cleanup rule
> <https://www.boxbe.com/popup?url=https%3A%2F%2Fwww.boxbe.com%2Fcleanup%3Ftoken%3DKbletEAkBTI7LTX07zc%252BDxkYFwX94sweO5s50QQl0YJBh9jg1%252Bf%252BioInzbXezpN9BSYlXo1UkGGCs%252BIhZIvG80%252FYGanKHWA0wnh4c75RsUEHyhHW7nHmEo8taGFZF2iTpZZ5X9T8spw%253D%26key%3DzEIc88%252BY2yLoRiVruadi4hHBnFgoCw%252F3Xt7JxkPhcCI%253D&tc_serial=23282286131&tc_rand=1796336779&utm_source=stf&utm_medium=email&utm_campaign=ANNO_CLEANUP_ADD&utm_content=001>
> | More info
> <http://blog.boxbe.com/general/boxbe-automatic-cleanup?tc_serial=23282286131&tc_rand=1796336779&utm_source=stf&utm_medium=email&utm_campaign=ANNO_CLEANUP_ADD&utm_content=001>
>
> Hello Mikhail,
>
> The netcdf distribution no longer contains the fortran libraries (and
> include files). After installing netcdf-4.3.3.1 as you did, you need to
> download netcdf-fortran (currently 4.4.2) from the unidata website and
> install it to the same location (similar procedure using configure, make,
> make check, make install). Afterwards, you should run nf-config --all to
> check that everything was installed correctly.
>
> Cheers
>
> Dom/
>
> On 12/11/2015, at 5:52 PM, Mikhail Titov <titovm at mail.com> wrote:
>
> Dear WRF users,
>
> I have Ubuntu OS, Bourne Shell, GNU gcc-4.8.4 with gfortran at my computer.
> I tried to build netCDF with classic library only (netCDF-3) from netCDF-4
> source.
> So I downloaded "netcdf-4.3.3.1.zip" and unziped it and moved in
> 'netcdf-4.3.3.1' directory.
> I used:
> =====================================
> ./configure --prefix=/home/user_pc/NCDF --disable-netcdf-4
> make
> sudo make install
> make check
> =====================================
> *It seems like netCDF building was OK*
> +-------------------------------------------------------------+
> | Congratulations! You have successfully installed netCDF!    |
> |                                                             |
> | You can use script "nc-config" to find out the relevant     |
> | compiler options to build your application. Enter           |
> |                                                             |
> |     nc-config --help                                        |
> |                                                             |
> | for additional information.                                 |
> |                                                             |
> | CAUTION:                                                    |
> |                                                             |
> | If you have not already run "make check", then we strongly  |
> | recommend you do so. It does not take very long.            |
> |                                                             |
> | Before using netCDF to store important data, test your      |
> | build with "make check".                                    |
>
> ==============================================
>
> ============================================================================
> Testsuite summary for netCDF 4.3.3.1
>
> ============================================================================
> # TOTAL: 2
> # PASS:  2
> # SKIP:  0
> # XFAIL: 0
> # FAIL:  0
> # XPASS: 0
> # ERROR: 0
>
> ============================================================================
>
> After 'export NETCDF=/home/user_pc/NCDF/' (and check 'echo $NETCDF'
> /home/user_pc/NCDF/)
> I apply './configure' inside WRFV3 and choose 40:
> "40.  x86_64 Linux, gfortran compiler with gcc   (serial)"
>
> I get an error:
> ===================
> Settings listed above are written to configure.wrf.
> If you wish to change settings, please edit that file.
> If you wish to change the default options, edit the file:
>      arch/configure_new.defaults
> E*rror : Not found /home/user_pc/NCDF/include/netcdf.inc*
>         Please check this installation of NetCDF and re-run this configure
> script
> ./configure: 651: exit: Illegal number: -1
> ==========================
> *And this is correct - I DON'T HAVE NETCDF.INC in
> /home/user_pc/NCDF/include/ sub-directory.*
> ===================================
> user_pc at SperPC:~/NCDF/include$ ls -l
> total 64
> -rw-r--r-- 1 root root 60074 нояб. 12 19:23 netcdf.h
> -rw-r--r-- 1 root root  2053 нояб. 12 19:23 netcdf_meta.h
> user_pc at SperPC:~/NCDF/include$ pwd
> /home/user_pc/NCDF/include
> ===================================
>
> *Any help how to install classic netCDF-3/netCDF-4 in Ubuntu OS with
> gfortran compiler correctly is highly appreciable. *
>
> Dr Michael Titov (research professor)
>
>
>
>
> _______________________________________________
> Wrf-users mailing list
> Wrf-users at ucar.edu
> http://mailman.ucar.edu/mailman/listinfo/wrf-users
>
>
>
> _______________________________________________
> Wrf-users mailing list
> Wrf-users at ucar.edu
> http://mailman.ucar.edu/mailman/listinfo/wrf-users
>
>


-- 
Dr.Mahally Kudsy
Weather Modification Technology Center
Agency for the Assessment and Application of Technology
Jln MH Thamrin 8, Jakarta, Indonesia
Telp:62-21-3168830 Fax:62-21-3906225 mkudsy at gmail.com
-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://mailman.ucar.edu/pipermail/wrf-users/attachments/20151113/9525779c/attachment.html