[Wrf-users] WRF v3.5.1 compilation errors, ifort v14. What do I miss?

Бакиров, Медер bakirov at almetico.com
Wed Mar 5 04:42:18 MST 2014


Thanks, Mahally Kudsy!

I'm going with smpar :).

With the best regards,
Meder Bakirov

On Tue, Mar 4, 2014 at 4:38 AM, Mahally Kudsy <mkudsy at gmail.com> wrote:

> Hi, may I ask you why do you select dmpar? dmpar is used for distributed
> memory paralel computing. If you want to use on a multicore single cpu
> workstation, I suggest you to select just smpar. Good luck.
> On Mar 4, 2014 12:05 AM, "Бакиров, Медер" <bakirov at almetico.com> wrote:
>
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>>
>> Dear Sirs!
>>
>> Can you, please, help me to successfully build WRF v.3.5.1?
>>
>> I'm trying to compile WRF 3.5.1 using Intel compiler, but
>> unfortunately stuck with the following error:
>> ------------------------
>> mpif90 -f90=ifort -o module_bl_temf.o -c -O3 -ip -fp-model precise -w
>> -ftz -align all -fno-alias -FR -convert big_endian    -I../dyn_em
>> -I../dyn_nmm   -I/home/dotcoder/src/WRFV3/external/esmf_time_f90
>> -I/home/dotcoder/src/WRFV3/main -I/
>> home/dotcoder/src/WRFV3/external/io_netcdf
>> -I/home/dotcoder/src/WRFV3/external/io_int
>> -I/home/dotcoder/src/WRFV3/frame -I/home/dotcoder/src/WRFV3/share
>> -I/home/dotcoder/src/WRFV3/phys -I/home/dotcoder/src/WRFV3/chem
>> -I/home/dotcoder/src/
>> WRFV3/inc -I/usr/local/netcdf-4.3.1.1//include  -i4  module_bl_temf.f90
>> catastrophic error: **Internal compiler error: segmentation violation
>> signal raised** Please report this error along with the circumstances
>> in which it occurred in a Software Problem Report.  Note: File and
>> line given may not be explicit
>>  cause of this error.
>> compilation aborted for module_bl_temf.f90 (code 1)
>> make[3]: [module_bl_temf.o] Error 1 (ignored)
>> ------------------------
>>
>> I have a RHEL 5.10 x86_64 system installed.
>>
>> In WRF configure menu, I select:
>> ------------------------
>> 19.  Linux x86_64 i486 i586 i686, ifort compiler with icc  (dmpar)
>> ------------------------
>>
>> Intel Compiler Version:
>> ------------------------
>> Intel(R) Fortran Intel(R) 64 Compiler XE for applications running on
>> Intel(R) 64, Version 14.0.2.144 Build 20140120
>> Copyright (C) 1985-2014 Intel Corporation.  All rights reserved.
>> FOR NON-COMMERCIAL USE ONLY
>> ------------------------
>>
>> All prerequisite software is built with Intel compiler:
>> ------------------------
>> - netcdf-4.3.1.1
>> - mpich-3.1
>> - jasper-1.900.1
>> - hdf5-1.8.12
>> - libpng-1.6.9
>> - szip-2.1
>> - zlib-1.2.8
>> ------------------------
>>
>> Flags are set to:
>> ------------------------
>> export CC=icc
>> export CXX=icpc
>> export CFLAGS='-O3 -xHost -ip -no-prec-div -static-intel'
>> export CXXFLAGS='-O3 -xHost -ip -no-prec-div -static-intel'
>> export F77=ifort
>> export FC=ifort
>> export F90=ifort
>> export FFLAGS='-O3 -xHost -ip -no-prec-div -static-intel'
>> export CPP='icc -E'
>> export CXXCPP='icpc -E'
>> ------------------------
>>
>> I have the following environment variables:
>> ------------------------
>> NETCDF=/usr/local/netcdf-4.3.1.1/
>> JASPERINC=/usr/local/jasper-1.900.1/include/
>> JASPERLIB=/usr/local/jasper-1.900.1/lib/
>>
>> INCLUDE=/opt/include/:/opt/intel/composer_xe_2013_sp1.2.144/mkl/include:/opt/intel/composer_xe_2013_sp1.2.144/mkl/include:/opt/intel/composer_xe_2013_sp1.2.144/mkl/include:/opt/intel/composer_xe_2013_sp1.2.144/mkl/include:/usr/local/mpich-3.1/include/:/usr/local/netcdf-4.3.1.1/include/:/usr/local/hdf5-1.8.12/include/:/usr/local/jasper-1.900.1/include/:/usr/local/zlib-1.2.8/include/:/usr/local/szip-2.1/include/:/usr/local/libpng-1.6.9/include/
>> ------------------------
>>
>> Please, find an attachment for a full gzipped compile log file.
>>
>> What more information should I provide?
>>
>> Thanks!
>>
>> With the best regards,
>> Meder Bakirov
>>
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>>
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