[Wrf-users] WRF v3.5.1 compilation errors, ifort v14. What do I miss?

Бакиров, Медер bakirov at almetico.com
Mon Mar 3 04:56:29 MST 2014


Dear Sirs!

Can you, please, help me to successfully build WRF v.3.5.1?

I'm trying to compile WRF 3.5.1 using Intel compiler, but
unfortunately stuck with the following error:
------------------------
mpif90 -f90=ifort -o module_bl_temf.o -c -O3 -ip -fp-model precise -w
-ftz -align all -fno-alias -FR -convert big_endian    -I../dyn_em
-I../dyn_nmm   -I/home/dotcoder/src/WRFV3/external/esmf_time_f90
-I/home/dotcoder/src/WRFV3/main -I/
home/dotcoder/src/WRFV3/external/io_netcdf
-I/home/dotcoder/src/WRFV3/external/io_int
-I/home/dotcoder/src/WRFV3/frame -I/home/dotcoder/src/WRFV3/share
-I/home/dotcoder/src/WRFV3/phys -I/home/dotcoder/src/WRFV3/chem
-I/home/dotcoder/src/
WRFV3/inc -I/usr/local/netcdf-4.3.1.1//include  -i4  module_bl_temf.f90
catastrophic error: **Internal compiler error: segmentation violation
signal raised** Please report this error along with the circumstances
in which it occurred in a Software Problem Report.  Note: File and
line given may not be explicit
 cause of this error.
compilation aborted for module_bl_temf.f90 (code 1)
make[3]: [module_bl_temf.o] Error 1 (ignored)
------------------------

I have a RHEL 5.10 x86_64 system installed.

In WRF configure menu, I select:
------------------------
19.  Linux x86_64 i486 i586 i686, ifort compiler with icc  (dmpar)
------------------------

Intel Compiler Version:
------------------------
Intel(R) Fortran Intel(R) 64 Compiler XE for applications running on
Intel(R) 64, Version 14.0.2.144 Build 20140120
Copyright (C) 1985-2014 Intel Corporation.  All rights reserved.
FOR NON-COMMERCIAL USE ONLY
------------------------

All prerequisite software is built with Intel compiler:
------------------------
- netcdf-4.3.1.1
- mpich-3.1
- jasper-1.900.1
- hdf5-1.8.12
- libpng-1.6.9
- szip-2.1
- zlib-1.2.8
------------------------

Flags are set to:
------------------------
export CC=icc
export CXX=icpc
export CFLAGS='-O3 -xHost -ip -no-prec-div -static-intel'
export CXXFLAGS='-O3 -xHost -ip -no-prec-div -static-intel'
export F77=ifort
export FC=ifort
export F90=ifort
export FFLAGS='-O3 -xHost -ip -no-prec-div -static-intel'
export CPP='icc -E'
export CXXCPP='icpc -E'
------------------------

I have the following environment variables:
------------------------
NETCDF=/usr/local/netcdf-4.3.1.1/
JASPERINC=/usr/local/jasper-1.900.1/include/
JASPERLIB=/usr/local/jasper-1.900.1/lib/
INCLUDE=/opt/include/:/opt/intel/composer_xe_2013_sp1.2.144/mkl/include:/opt/intel/composer_xe_2013_sp1.2.144/mkl/include:/opt/intel/composer_xe_2013_sp1.2.144/mkl/include:/opt/intel/composer_xe_2013_sp1.2.144/mkl/include:/usr/local/mpich-3.1/include/:/usr/local/netcdf-4.3.1.1/include/:/usr/local/hdf5-1.8.12/include/:/usr/local/jasper-1.900.1/include/:/usr/local/zlib-1.2.8/include/:/usr/local/szip-2.1/include/:/usr/local/libpng-1.6.9/include/
------------------------

Please, find an attachment for a full gzipped compile log file.

What more information should I provide?

Thanks!

With the best regards,
Meder Bakirov
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