[ncl-install] ncl: error while loading shared libraries

Saleh Alsaedi alsasale at isu.edu
Wed Jul 22 12:15:48 MDT 2020


Hello all,

I would like your help in installing NCL

I have installed conda then I installed NCL using conda.

but when I run : ncl -v
I get this error: "ncl: error while loading shared libraries: libnsl.so.1:
cannot open shared object file: No such file or directory"

I have followed the steps from this link:
https://www.ncl.ucar.edu/Download/conda.shtml

when I did the NCL test it fails


I have attached the output error in .txt format

thank you
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(ncl_stable) [ceccr01 at localhost Downloads]$ conda list -n ncl_stable
# packages in environment at /home/ceccr01/miniconda3/envs/ncl_stable:
#
# Name                    Version                   Build  Channel
_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                       0_gnu    conda-forge
boost-cpp                 1.72.0               h8e57a91_0    conda-forge
bzip2                     1.0.8                h516909a_2    conda-forge
ca-certificates           2020.6.20            hecda079_0    conda-forge
cairo                     1.16.0            hcf35c78_1003    conda-forge
certifi                   2020.6.20        py38h32f6830_0    conda-forge
cfitsio                   3.470                h3eac812_5    conda-forge
curl                      7.71.1               he644dc0_3    conda-forge
esmf                      8.0.0           nompi_hb0fcdcb_6    conda-forge
expat                     2.2.9                he1b5a44_2    conda-forge
fontconfig                2.13.1            h86ecdb6_1001    conda-forge
freetype                  2.10.2               he06d7ca_0    conda-forge
freexl                    1.0.5             h516909a_1002    conda-forge
geos                      3.8.1                he1b5a44_0    conda-forge
geotiff                   1.5.1               h05acad5_10    conda-forge
gettext                   0.19.8.1          hc5be6a0_1002    conda-forge
giflib                    5.2.1                h516909a_2    conda-forge
glib                      2.65.0               h6f030ca_0    conda-forge
gsl                       2.6                  h294904e_0    conda-forge
hdf4                      4.2.13            hf30be14_1003    conda-forge
hdf5                      1.10.5          nompi_h3c11f04_1104    conda-forge
hdfeos2                   2.20              h64bfcee_1000    conda-forge
hdfeos5                   5.1.16               h8b6279f_5    conda-forge
icu                       64.2                 he1b5a44_1    conda-forge
jasper                    1.900.1           h07fcdf6_1006    conda-forge
jpeg                      9d                   h516909a_0    conda-forge
json-c                    0.13.1            hbfbb72e_1002    conda-forge
kealib                    1.4.13               hec59c27_0    conda-forge
krb5                      1.17.1               hfafb76e_1    conda-forge
ld_impl_linux-64          2.34                 h53a641e_7    conda-forge
libblas                   3.8.0               17_openblas    conda-forge
libcblas                  3.8.0               17_openblas    conda-forge
libcurl                   7.71.1               hcdd3856_3    conda-forge
libdap4                   3.20.6               h1d1bd15_1    conda-forge
libedit                   3.1.20191231         h46ee950_1    conda-forge
libffi                    3.2.1             he1b5a44_1007    conda-forge
libgcc-ng                 9.2.0                h24d8f2e_2    conda-forge
libgdal                   3.0.4                h3dfc09a_6    conda-forge
libgfortran-ng            7.5.0                hdf63c60_6    conda-forge
libgomp                   9.2.0                h24d8f2e_2    conda-forge
libiconv                  1.15              h516909a_1006    conda-forge
libkml                    1.3.0             hb574062_1011    conda-forge
libnetcdf                 4.7.4           nompi_h9f9fd6a_101    conda-forge
libopenblas               0.3.10          pthreads_hb3c22a3_3    conda-forge
libpng                    1.6.37               hed695b0_1    conda-forge
libpq                     12.3                 h5513abc_0    conda-forge
libspatialite             4.3.0a            h2482549_1038    conda-forge
libssh2                   1.9.0                hab1572f_4    conda-forge
libstdcxx-ng              9.2.0                hdf63c60_2    conda-forge
libtiff                   4.1.0                hc7e4089_6    conda-forge
libuuid                   2.32.1            h14c3975_1000    conda-forge
libwebp-base              1.1.0                h516909a_3    conda-forge
libxcb                    1.13              h14c3975_1002    conda-forge
libxml2                   2.9.10               hee79883_0    conda-forge
lz4-c                     1.9.2                he1b5a44_1    conda-forge
ncl                       6.6.2               hfe5c2fd_21    conda-forge
ncurses                   6.2                  he1b5a44_1    conda-forge
netcdf-fortran            4.5.2           nompi_h45d7149_104    conda-forge
openjpeg                  2.3.1                h981e76c_3    conda-forge
openssl                   1.1.1g               h516909a_0    conda-forge
pcre                      8.44                 he1b5a44_0    conda-forge
pip                       20.1.1                     py_1    conda-forge
pixman                    0.38.0            h516909a_1003    conda-forge
poppler                   0.67.0               h14e79db_8    conda-forge
poppler-data              0.4.9                         1    conda-forge
postgresql                12.3                 h8573dbc_0    conda-forge
proj                      7.0.0                h966b41f_5    conda-forge
pthread-stubs             0.4               h14c3975_1001    conda-forge
python                    3.8.4           cpython_h425cb1d_0    conda-forge
python_abi                3.8                      1_cp38    conda-forge
readline                  8.0                  he28a2e2_2    conda-forge
setuptools                49.2.0           py38h32f6830_0    conda-forge
sqlite                    3.32.3               hcee41ef_1    conda-forge
tbb                       2020.1               hc9558a2_0    conda-forge
tiledb                    1.7.7                h8efa9f0_3    conda-forge
tk                        8.6.10               hed695b0_0    conda-forge
tzcode                    2020a                h516909a_0    conda-forge
udunits2                  2.2.27.6          h4e0c4b3_1001    conda-forge
wheel                     0.34.2                     py_1    conda-forge
xerces-c                  3.2.2             h8412b87_1004    conda-forge
xorg-imake                1.0.7                         0    conda-forge
xorg-kbproto              1.0.7             h14c3975_1002    conda-forge
xorg-libice               1.0.10               h516909a_0    conda-forge
xorg-libsm                1.2.3             h84519dc_1000    conda-forge
xorg-libx11               1.6.9                h516909a_0    conda-forge
xorg-libxau               1.0.9                h14c3975_0    conda-forge
xorg-libxaw               1.0.13            h14c3975_1002    conda-forge
xorg-libxdmcp             1.1.3                h516909a_0    conda-forge
xorg-libxext              1.3.4                h516909a_0    conda-forge
xorg-libxmu               1.1.3                h516909a_0    conda-forge
xorg-libxpm               3.5.13               h516909a_0    conda-forge
xorg-libxrender           0.9.10            h516909a_1002    conda-forge
xorg-libxt                1.1.5             h516909a_1003    conda-forge
xorg-makedepend           1.0.6                he1b5a44_1    conda-forge
xorg-renderproto          0.11.1            h14c3975_1002    conda-forge
xorg-xextproto            7.3.0             h14c3975_1002    conda-forge
xorg-xproto               7.0.31            h14c3975_1007    conda-forge
xz                        5.2.5                h516909a_1    conda-forge
zlib                      1.2.11            h516909a_1006    conda-forge
zstd                      1.4.5                h6597ccf_1    conda-forge
(ncl_stable) [ceccr01 at localhost Downloads]$     conda --version
conda 4.8.3
(ncl_stable) [ceccr01 at localhost Downloads]$     which ncl
~/miniconda3/envs/ncl_stable/bin/ncl
(ncl_stable) [ceccr01 at localhost Downloads]$     ncl -V
ncl: error while loading shared libraries: libnsl.so.1: cannot open shared object file: No such file or directory
(ncl_stable) [ceccr01 at localhost Downloads]$     env  | grep NCARG
NCARG_ROOT=/home/ceccr01/miniconda3/envs/ncl_stable
(ncl_stable) [ceccr01 at localhost Downloads]$ 


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