[ncl-install] Fwd: Problem loading libraries NCL.6.5.0 MacOS installation via miniconda

Tue Oct 16 11:49:33 MDT 2018

Lyndz,

I think you have one or more leftover NCARG_XXXX environment variables
being set from a previous install of NCL.

You should only have NCARG_ROOT set and it should be set to

/Users/lyndz/miniconda2/envs/toolbox

If you type the following from a terminal window:

env | grep NCARG

it will show you what other NCARG_XXXX environment variables you have set.
I'm guessing you might have NCARG_NCARG and NCARG_LIB set. If you do see
these, then edit whatever .xxxx file in your home directory is setting
them, and comment or remove those lines. You can check for which file is
setting them by typing:

grep NCARG ~/.*

Good luck,

--Mary

On Mon, Oct 15, 2018 at 10:37 PM, Lyndz via ncl-install <
ncl-install at ucar.edu> wrote:

> Dear NCL-support team,
>
> I encountered a warning message after installing NCL via conda. I'll
> appreciate any help you can provide regarding this matter.
>
> Here's the warning message:
>
>  Copyright (C) 1995-2018 - All Rights Reserved
>
>  University Corporation for Atmospheric Research
>
>  NCAR Command Language Version 6.5.0
>
>  The use of this software is governed by a License   Agreement.
>
>  See http://www.ncl.ucar.edu/ for more details.
>
>  warning:Unable to load System Resource File /usr/local/ncl-6.5.0/lib/
> ncarg/sysresfile
>
>  warning:WorkstationClassInitialize:Unable to access rgb   color database
> - named colors unsupported:[errno=2]
>
>  warning:["Palette.c":1850]:NhlLoadColormapFiles: Invalid   colormap
> directory: /usr/local/ncl-6.5.0/lib/ncarg/colormaps
>
>
>
> *Details:*
>
>
>  * which ncl* : /Users/lyndz/miniconda2/envs/toolbox/bin/ncl
> *  ncl -V* : 6.5.0
>
>  * otool -L `which ncl`* :
>
> /Users/lyndz/miniconda2/envs/toolbox/bin/ncl:
>
> 	/usr/lib/libc++.1.dylib (compatibility version 1.0.0, current version 307.5.0)
>
> 	@rpath/libnetcdf.13.dylib (compatibility version 13.0.0, current version 13.0.0)
>
> 	@rpath/libcurl.4.dylib (compatibility version 10.0.0, current version 10.0.0)
>
> 	@rpath/libhdf5_hl.100.dylib (compatibility version 102.0.0, current version 102.0.0)
>
> 	@rpath/libhdf5.101.dylib (compatibility version 103.0.0, current version 103.0.0)
>
> 	@rpath/libmfhdf.0.dylib (compatibility version 1.0.0, current version 1.0.0)
>
> 	@rpath/libdf.0.dylib (compatibility version 1.0.0, current version 1.0.0)
>
> 	@rpath/libjpeg.9.dylib (compatibility version 13.0.0, current version 13.0.0)
>
> 	@rpath/libz.1.dylib (compatibility version 1.0.0, current version 1.2.11)
>
> 	@rpath/libgdal.20.dylib (compatibility version 24.0.0, current version 24.3.0)
>
> 	@rpath/libproj.12.dylib (compatibility version 13.0.0, current version 13.0.0)
>
> 	@rpath/libudunits2.0.dylib (compatibility version 2.0.0, current version 2.0.0)
>
> 	@rpath/libexpat.1.dylib (compatibility version 8.0.0, current version 8.7.0)
>
> 	@rpath/libjasper.1.dylib (compatibility version 2.0.0, current version 2.0.0)
>
> 	@rpath/libpng16.16.dylib (compatibility version 51.0.0, current version 51.0.0)
>
> 	/opt/X11/lib/libcairo.2.dylib (compatibility version 11403.0.0, current version 11403.6.0)
>
> 	/opt/X11/lib/libfontconfig.1.dylib (compatibility version 11.0.0, current version 11.2.0)
>
> 	/opt/X11/lib/libpixman-1.0.dylib (compatibility version 35.0.0, current version 35.0.0)
>
> 	/opt/X11/lib/libfreetype.6.dylib (compatibility version 19.0.0, current version 19.6.0)
>
> 	/opt/X11/lib/libXrender.1.dylib (compatibility version 5.0.0, current version 5.0.0)
>
> 	@rpath/libiconv.2.dylib (compatibility version 9.0.0, current version 9.0.0)
>
> 	@rpath/libbz2.dylib (compatibility version 0.0.0, current version 0.0.0)
>
> 	@rpath/libgsl.19.dylib (compatibility version 22.0.0, current version 22.0.0)
>
> 	@rpath/libopenblas.dylib (compatibility version 0.0.0, current version 0.0.0)
>
> 	/opt/X11/lib/libXpm.4.dylib (compatibility version 16.0.0, current version 16.0.0)
>
> 	/opt/X11/lib/libX11.6.dylib (compatibility version 10.0.0, current version 10.0.0)
>
> 	/opt/X11/lib/libXext.6.dylib (compatibility version 11.0.0, current version 11.0.0)
>
> 	@rpath/libgfortran.3.dylib (compatibility version 4.0.0, current version 4.0.0)
>
> 	@rpath/libquadmath.0.dylib (compatibility version 1.0.0, current version 1.0.0)
>
> 	@rpath/libstdc++.6.dylib (compatibility version 7.0.0, current version 7.19.0)
>
> 	@rpath/libgomp.1.dylib (compatibility version 2.0.0, current version 2.0.0)
>
> 	/usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1238.60.2)
>
> 	@rpath/libgcc_s.1.dylib (compatibility version 1.0.0, current version 1.0.0)
>
>
>  * env | grep NCARG* : NCARG_ROOT=/usr/local/ncl-6.5.0
>
> *  which gcc* : /usr/local/bin/gcc
>
>   *which gfortran* : /usr/local/bin/gfortran
>
> *  gfortran --version* : GNU Fortran (Homebrew GCC 8.1.0) 8.1.0
>
> *  gcc --version* : gcc (GCC) 6.3.0
>
>
> *Lyndz*
>
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