[ncl-install] install ncl 6.4.0 on geyser

[Wei Cheng - NOAA Affiliate]

I also just realize Mary's installation has different ncltest for different
compilers, if you don't want to swap compilers...

Wei

On Mon, Jan 9, 2017 at 11:38 AM, Wei Cheng - NOAA Affiliate <
wei.cheng at noaa.gov> wrote:

> Thanks David. It made the difference!
>
> Wei
>
> On Mon, Jan 9, 2017 at 11:18 AM, David Brown <dbrown at ucar.edu> wrote:
>
>> Try:
>> module swap intel gnu/4.7.2
>>
>> On Mon, Jan 9, 2017 at 11:21 AM, Wei Cheng - NOAA Affiliate
>> <wei.cheng at noaa.gov> wrote:
>> > Hi Dennis,
>> >
>> > I tried the way Mary Haley recommeded, and I got the following:
>> >
>> > [wcheng at geyser03 ~]$ which ncl
>> > /glade/u/apps/contrib/ncl-nightly/gnu/4.7.2/bin/ncl
>> > [wcheng at geyser03 ~]$ env | grep NCARG_ROOT
>> > NCARG_ROOT=/glade/u/apps/contrib/ncl-nightly/gnu/4.7.2
>> > [wcheng at geyser03 ~]$ ncl -V
>> > ncl: /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4.15' not found
>> (required
>> > by ncl)
>> >
>> > Looks like I miss GLIBCXX_3.4.15? How do I install it?
>> >
>> > thanks,
>> > Wei
>> >
>> >
>> > On Fri, Jan 6, 2017 at 7:49 PM, Dennis Shea <shea at ucar.edu> wrote:
>> >>
>> >> You do not need to use conda for yellowstone. Mary Haley sent the
>> >> following in April 2016.
>> >>
>> >> ===
>> >> Hi all,
>> >>
>> >> I created a module for the development version of NCL that is built
>> >> nightly.
>> >>
>> >> Please use the module command instead of the previous instructions I
>> sent.
>> >> The old directory:
>> >>
>> >> /glade/p/work/haley/dev/ncl-trunk-gnu472-opt
>> >>
>> >> is no longer going to get updated nightly.
>> >>
>> >> To use the new module, first type:
>> >>
>> >> module use /glade/apps/contrib/ncl-nightly/modules
>> >>
>> >> You will have to do this every time you login, or you can add this
>> path to
>> >> your MODULEPATH in your .tcshrc/.bashrc/ file:
>> >>
>> >> setenv MODULEPATH /glade/apps/contrib/ncl-nightl
>> y/modules:${MODULEPATH}
>> >>
>> >> or
>> >>
>> >> export MODULEPATH=/glade/apps/contrib/ncl-nightly/modules:${MODULEP
>> ATH}
>> >>
>> >> Then you can type:
>> >>
>> >> module load ncltest
>> >>
>> >> This is a *development* version of NCL. Please do not use in a
>> production
>> >> environment.
>> >>
>> >> You can quickly test with:
>> >>
>> >> module load ncltest
>> >> which ncl
>> >> env | grep NCARG_ROOT
>> >> ncl -V
>> >> ng4ex xy01n -W png -clean
>> >>
>> >> The "which" and "env" commands should report:
>> >>
>> >> NCARG_ROOT=/glade/u/apps/contrib/ncl-nightly/gnu/4.7.2
>> >> /glade/u/apps/contrib/ncl-nightly/gnu/4.7.2/bin/ncl
>> >>
>> >> The "ncl -V" command should report something like:
>> >>
>> >> 6.4.0-16Apr2016_0929
>> >>
>> >>
>> >>
>> >> On Fri, Jan 6, 2017 at 6:18 PM, Wei Cheng - NOAA Affiliate
>> >> <wei.cheng at noaa.gov> wrote:
>> >>>
>> >>> Hello--,
>> >>>
>> >>> I would like to use some new features of ncl 6.4.0 so I tried to
>> install
>> >>> it. Following instructions, I first installed conda, which finished
>> without
>> >>> error message. Then I did
>> >>>
>> >>> conda create -n ncl_test -c dbrown -c khallock ncl
>> >>>
>> >>> which also finished without error message.
>> >>>
>> >>> The final step is to do "source activate ncl_test", this is where I
>> get
>> >>> an error:
>> >>>
>> >>>
>> >>>  @geyser16 ~]$ source activate ncl_test
>> >>>
>> >>> activate: No such file or directory.
>> >>>
>> >>> Did I miss a step somewhere? Thanks for any input!
>> >>>
>> >>> Wei
>> >>>
>> >>>
>> >>>
>> >>> _______________________________________________
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>> >>>
>> >>
>> >
>> >
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>
>
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