[ncl-install] Problems installing ncar graphics, follow up
Mannucci, Anthony J (335G)
anthony.j.mannucci at jpl.nasa.gov
Thu Feb 27 09:59:33 MST 2014
I am trying to install ncar graphics on a Linux RedHat enterprise 5 system without root privileges. I downloaded the binary: ncl_ncarg-6.1.2.Linux_RHEL5.6_x86_64_nodap_gcc412.tar.gz .
After setting up the paths as recommended, the following test program works successfully:
ng4ex gsun01n –clean
However the other recommended test program fails:
ncargex cpex08 –clean
I looked online and found that including –lgfortran will resolve gfortran references. I have found two gfortran libraries on the system:
/usr/lib/gcc/x86_64-redhat-linux/4.1.1/libgfortran.a
and
/usr/lib64/libgfortran.so.1
I explicitly link to both libraries in the ncargf77 script. That resolves the libgfortran errors.
The remaining errors are as follows:
Compiling and linking...
gfortran -fPIC -fno-second-underscore -O -o cpex08 cpexcc.f cpex08.f -L/tec/mannucci/tiegcm/ncarg/lib -L/usr/lib64 -lncarg -lncarg_gks -lncarg_c -lX11 -lXext -lcairo -lfontconfig -lpixman-1 -lfreetype -lexpat -lpng -lz -lpthread -lbz2 -lXrender /usr/lib64/libgfortran.so.1 /usr/lib64/libcairo.so.2 /usr/lib/gcc/x86_64-redhat-linux/4.1.1/libgfortran.a
/tec/mannucci/tiegcm/ncarg/lib/libncarg_gks.a(cro.o): In function `GetCROClipping':
cro.c:(.text+0x12c3): undefined reference to `cairo_clip_extents'
/tec/mannucci/tiegcm/ncarg/lib/libncarg_gks.a(cro.o): In function `CROpict_init':
cro.c:(.text+0x13cc): undefined reference to `cairo_clip_extents'
/tec/mannucci/tiegcm/ncarg/lib/libncarg_gks.a(cro.o): In function `cro_OpenWorkstation':
cro.c:(.text+0x4192): undefined reference to `cairo_ps_surface_set_eps'
/tec/mannucci/tiegcm/ncarg/lib/libncarg_gks.a(cro.o): In function `cro_Cellarray':
cro.c:(.text+0x4a0a): undefined reference to `cairo_pattern_get_rgba'
The compile and link failed.
This appears to be a cairo version problem. Cairo libraries are on the system, but no symbol such as cairo_clip_extents is found (using nm –D).
I have since successfully binary-installed an earlier version of ncl/ncarg (5.x) that is useable for now.
Additional information is as follows:
gaim{mannucci}243: uname -a
Linux gaim 2.6.18-371.1.2.el5 #1 SMP Mon Oct 7 16:34:35 EDT 2013 x86_64 x86_64 x86_64 GNU/Linux
gaim{mannucci}244: cat /etc/issue
Red Hat Enterprise Linux Server release 5.10 (Tikanga)
Kernel \r on an \m
Help is appreciated. Thanks.
-Tony
--
Tony Mannucci
Supervisor, Ionospheric and Atmospheric Remote Sensing Group
Mail-Stop 138-308, Tel > (818) 354-1699
Jet Propulsion Laboratory, Fax > (818) 393-5115
California Institute of Technology, Email > Tony.Mannucci at jpl.nasa.gov<mailto:Tony.Mannucci at jpl.nasa.gov>
4800 Oak Grove Drive, http://scienceandtechnology.jpl.nasa.gov/people/a_mannucci/
Pasadena, CA 91109
-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://mailman.ucar.edu/pipermail/ncl-install/attachments/20140227/37c38ae6/attachment.html
More information about the ncl-install
mailing list