[ncl-install] Problem with Building NCL-6.2.0 from Source Code
Shi-Pei Hsu
hsushipei1 at gmail.com
Fri Apr 18 22:01:41 MDT 2014
Hello Mary,
$ which ncl
/data1/hsushipei/software/ncl-6.2.0-testing/bin/ncl
$ which ESMF_RegridWeightGen
/data1/hsushipei/software/ncl-6.2.0-testing/bin/ESMF_RegridWeightGen
# I copy the "ESMF_RegridWeightGen" from the original ESMF build directory
to $NCARG_ROOT/bin
$ ESMF_RegridWeightGen --version
ESMF_VERSION_STRING: 6.3.0r
ESMF_VERSION_MAJOR: 6
ESMF_VERSION_MINOR: 3
ESMF_VERSION_REVISION: 0
ESMF_VERSION_PATCHLEVEL: 0
ESMF_VERSION_PUBLIC: T
ESMF_VERSION_BETASNAPSHOT: F
The PET* file is attached
Thank you!
Sincerely Yours,
Jack Hsu
On Fri, Apr 18, 2014 at 11:08 PM, Mary Haley <haley at ucar.edu> wrote:
> Hi Jack,
>
> It looks like it either can't find your ESMF_RegridWeightGen binary, or it
> is not working.
>
> What does the following report:
>
> which ncl
> which ESMF_RegridWeightGen
> ESMF_RegridWeightGen --version
>
> Also, did a PET* file get created? If so, can you email it to me?
>
> Thanks,
>
> --Mary
>
> On Apr 18, 2014, at 7:45 AM, Shi-Pei Hsu <hsushipei1 at gmail.com> wrote:
>
> >
> > Excuse me, I forgot to send this email to ncl-install, so i re-send this
> again
> >
> > Hi Mary,
> >
> > I've built ESMF-6.3.0r myself and copy the installed
> "ESMF_RegridWeightGen" binary from the original ESMF build directory to
> $NCARG_ROOT/bin, and then i ran again the "ESMF_regrid_1.ncl" script. The
> output was:
> >
> > Copyright (C) 1995-2014 - All Rights Reserved
> > University Corporation for Atmospheric Research
> > NCAR Command Language Version 6.2.0
> > The use of this software is governed by a License Agreement.
> > See http://www.ncl.ucar.edu/ for more details.
> >
> > Variable: temp
> > Type: float
> > Total Size: 46336 bytes
> > 11584 values
> > Number of Dimensions: 4
> > Dimensions and sizes: [TIME | 1] x [DEPTH | 1] x [LAT | 64] x [LON | 181]
> > Coordinates:
> > TIME: [30.44000053405762..30.44000053405762]
> > DEPTH: [ 7.5.. 7.5]
> > LAT: [-59.9900016784668..58.9700202941895]
> > LON: [-0.5..359.5]
> > Number Of Attributes: 5
> > missing_value : -9.99e+33
> > _FillValue : -9.99e+33
> > long_name : TEMPERATURE
> > history : From ncep_sd_corrected_monthly_means
> > units : deg. C
> > (0) ESMF_regrid_gen_weights: 'ESMF_RegridWeightGen' was not successful.
> >
> > Does the " 'ESMF_RegridWeightGen' was not successful" mean the failure
> of building EFMS?
> >
> > P.S. During the ESMF building process, the software ask me to run"gmake
> check" to test the build, but it says "no failure"
> > and there wasnt any "Error"
> >
> > Thank you very much!!
> >
> > Best regards,
> > Jack Hsu
> >
> >
> > On Fri, Apr 18, 2014 at 2:33 PM, Shi-Pei Hsu <hsushipei1 at gmail.com>
> wrote:
> > Hi Mary,
> >
> > I've built ESMF-6.3.0r myself and copy the installed
> "ESMF_RegridWeightGen" binary from the original ESMF build directory to
> $NCARG_ROOT/bin, and then i ran again the "ESMF_regrid_1.ncl" script. The
> output was:
> >
> > Copyright (C) 1995-2014 - All Rights Reserved
> > University Corporation for Atmospheric Research
> > NCAR Command Language Version 6.2.0
> > The use of this software is governed by a License Agreement.
> > See http://www.ncl.ucar.edu/ for more details.
> >
> > Variable: temp
> > Type: float
> > Total Size: 46336 bytes
> > 11584 values
> > Number of Dimensions: 4
> > Dimensions and sizes: [TIME | 1] x [DEPTH | 1] x [LAT | 64] x [LON | 181]
> > Coordinates:
> > TIME: [30.44000053405762..30.44000053405762]
> > DEPTH: [ 7.5.. 7.5]
> > LAT: [-59.9900016784668..58.9700202941895]
> > LON: [-0.5..359.5]
> > Number Of Attributes: 5
> > missing_value : -9.99e+33
> > _FillValue : -9.99e+33
> > long_name : TEMPERATURE
> > history : From ncep_sd_corrected_monthly_means
> > units : deg. C
> > (0) ESMF_regrid_gen_weights: 'ESMF_RegridWeightGen' was not successful.
> >
> > Does the " 'ESMF_RegridWeightGen' was not successful" mean the failure
> of building EFMS?
> >
> > P.S. During the ESMF building process, the software ask me to run"gmake
> check" to test the build, but it says "no failure"
> > and there wasnt any "Error"
> >
> > Thank you very much!!
> >
> > Best regards,
> > Jack Hsu
> >
> >
> > On Thu, Apr 17, 2014 at 10:01 PM, Shi-Pei Hsu <hsushipei1 at gmail.com>
> wrote:
> > Hi Mary,
> >
> > Thanks very much for your help!
> >
> > The "ncl" binary can be found under $NCARG_ROOT/bin which means the main
> NCL build is done.
> >
> > However, it seems the ESMF build was not successful.
> >
> > I failed to run script "ESMF_regrid_1.ncl" provided by NCL official
> website
> >
> > ,and the error message was:
> >
> > sh: ESMF_RegridWeightGen: command not found
> > fatal:The result of the conditional expression yields a missing value.
> NCL can not determine branch, see ismissing function
> > fatal:["Execute.c":8567]:Execute: Error occurred at or near line 2434 in
> file $NCARG_ROOT/lib/ncarg/nclscripts/esmf/ESMF_regridding.ncl
> >
> > fatal:["Execute.c":8567]:Execute: Error occurred at or near line 3471 in
> file $NCARG_ROOT/lib/ncarg/nclscripts/esmf/ESMF_regridding.ncl
> >
> > fatal:["Execute.c":8567]:Execute: Error occurred at or near line 66 in
> file ESMF_regrid_1.ncl
> >
> > I couldn't find "ESMF_RegridWeightGen" binary in $NCARG_ROOT/bin
> >
> > i checked the make-output(attached in this email) file for any "Error",
> but there wasn't
> >
> > So don't know what's wrong with ESMF
> >
> > Thank you!
> >
> > Sincerely Yours,
> > Jack Hsu
> >
> >
> >
> >
> > On Mon, Apr 14, 2014 at 10:53 PM, Mary Haley <haley at ucar.edu> wrote:
> > Dear Jack-Hsu,
> >
> > The "-ll" is for linking in the lex library, which should be called
> "libl.a" on your system.
> >
> > On some systems, this library might be a link to libfl.a, which is the
> flex library. For example:
> >
> > lrwxrwxrwx. 1 root root 7 Jun 19 2013 /usr/lib64/libl.a -> libfl.a
> >
> >
> > My guess is that you need to install lex/flex and/or create a link
> between libfl.a and libl.a
> >
> > --Mary
> >
> > On Apr 7, 2014, at 7:36 PM, Shi-Pei Hsu <hsushipei1 at gmail.com> wrote:
> >
> > > Dear all,
> > >
> > > I'd like to build NCL-6.2.0 with ESMF support.
> > >
> > > However, the native gcc(4.1.2) in my system(SUSE Linux 10 SP2) is too
> old for ESMF.
> > >
> > > So I built a newer gcc(4.4.7) and built NCL-6.2.0 with it.
> > >
> > > Unfortunately, it failed, and I checked the "make-output file". I got
> the following "Error" message
> > >
> > > gcc -ansi -fPIC -fopenmp -O -o wrapit77 y.tab.o lex.yy.o Symbol.o
> wrapit_main.o -L/data1/hsushipei/software/ncl-6.2.0-testing/lib
> -L/data1/hsushipei/software/ncl-6.2.0-testing/lib -L/usr/X11R6/lib64 -ll
> > > /usr/bin/ld: cannot find -ll
> > > collect2: ld return 1
> > > make[4]: *** [wrapit77] Error 1
> > > make[4]: Leaving directory
> `/data1/hsushipei/software/ncl-6.2.0-testing/src/ncl_ncarg-6.2.0/ni/src/mkwrap'
> > >
> > > Thanks for your help!
> > >
> > > Sincerely Yours,
> > > Jack-Hsu
> > >
> > > National Taiwan University
> > >
> > > <make-output.tar.bz2>_______________________________________________
> > > ncl-install mailing list
> > > List instructions, subscriber options, unsubscribe:
> > > http://mailman.ucar.edu/mailman/listinfo/ncl-install
> >
> >
> >
> >
>
>
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