[Met_help] [rt.rap.ucar.edu #101728] History for MET 10.0.0 install issue
Julie Prestopnik via RT
met_help at ucar.edu
Tue Oct 12 12:41:58 MDT 2021
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Initial Request
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Hi all-
It's been a while! I'm in the process of installing 10.0.0 (up from 9.1), and have run into an issue. The issue immediately displays when running the basic 'make test' from the top directory, where I get this error:
cd scripts; make
make[1]: Entering directory '/fewxops/software/met/met-10.0.0/scripts'
*** Running ASCII2NC to reformat ASCII point observations into NetCDF ***
../src/tools/other/ascii2nc/ascii2nc \
../data/sample_obs/ascii/sample_ascii_obs.txt \
../out/ascii2nc/sample_ascii.nc \
-v 2
DEBUG 1: Config File: /usr/local/share/met/config/Ascii2NcConfig_default
DEBUG 2: Rejected 0 observations off the masking grid.
DEBUG 2: Rejected 0 observations outside the masking polyline.
DEBUG 2: Rejected 0 observations not matched with station ID's.
DEBUG 2: Processing observations for 5 headers.
DEBUG 1: Creating NetCDF Observation file: ../out/ascii2nc/sample_ascii.nc
../src/tools/other/ascii2nc/ascii2nc: symbol lookup error: ../src/tools/other/ascii2nc/ascii2nc: undefined symbol: _ZN6netCDF6NcFileC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEENS0_8FileModeENS0_10FileFormatE
make[1]: *** [mk/ascii2nc.mk:23: ascii2nc] Error 127
make[1]: Leaving directory '/fewxops/software/met/met-10.0.0/scripts
make: *** [Makefile:868: test] Error 2
This was a pretty standard install into the pwd where the MET tarbell is held, with the configure command of:
./configure --prefix=`pwd` --enable-grib2 --enable-python --enable-mode_graphics
For the record, I attempted to run a simple point_stat analysis with 10.0.0, and got a similar error:
fewxops/software/met/met-10.0.0/bin/point_stat /fewxops/verification/data/model/grib2/feens1/2021/feens1_verify_2021101100f06.grib2 /fewxops/verification/data/obs/met_format/madis_meso/mesonet_fe_2021101106.nc /usr/local/share/met/config/PointStatConfig_default -point_obs /fewxops/verification/data/obs/met_format/madis_metar/metar_fe_2021101106.nc
DEBUG 1: Default Config File: /usr/local/share/met/config/PointStatConfig_default
DEBUG 1: User Config File: /usr/local/share/met/config/PointStatConfig_default
/fewxops/software/met/met-10.0.0/bin/point_stat: symbol lookup error: /fewxops/software/met/met-10.0.0/bin/point_stat: undefined symbol: _ZN6netCDF6NcFileC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEENS0_8FileModeE
I have attached the configure file, make_install.log and .cshrc file which governs the environmental variables for install/operations.
I feel like I've seen a similar error before, in previous MET installs, but I can't find anything in my note logs that helps me identify what the problem may be.
FWIW, it appears my netCDF libraries are: netcdf-c-4.6., netcdf-cxx4-4.3.0, netcdf-4.6.3. Do those happen to need upgrading?
As always, any help is appreciated!
Thanks!
-Tom
[https://firstenergycorp.com/content/dam/opcologos/emailsig/FE-logo.png]
Thomas Workoff
Sr Scientist
office: 330-436-1475 (850-1475)
tworkoff at firstenergycorp.com
341 White Pond Drive, Akron, OH 44320 | mailstop: A-WAC-C1 / AK-West Akron Campus
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Complete Ticket History
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Subject: MET 10.0.0 install issue
From: Julie Prestopnik
Time: Tue Oct 12 12:37:06 2021
Hi Tom,
We switched from providing support through this email address to
providing
support through GitHub Discussions. You will need to create a free
GitHub
account if you don’t have one already and post your questions to the
METplus Components Discussion Forum:
https://github.com/dtcenter/METplus/discussions/new.
Thanks!
Julie
***** ALERT: THIS E-MAIL ADDRESS IS NO LONGER IN USE FOR SUPPORT OF
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MONITORING THIS EMAIL.
PLEASE CREATE A FREE GITHUB ACCOUNT AND POST YOUR QUESTIONS TO THE
METPLUS
COMPONENTS DISCUSSION FORUM AT
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INFORMATION,
SEE OUR WELCOME TO THE METPLUS COMPONENTS DISCUSSIONS POST AT
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On Tue, Oct 12, 2021 at 11:21 AM Workoff, Thomas E via RT
<met_help at ucar.edu>
wrote:
>
> Tue Oct 12 11:21:04 2021: Request 101728 was acted upon.
> Transaction: Ticket created by tworkoff at firstenergycorp.com
> Queue: met_help
> Subject: MET 10.0.0 install issue
> Owner: Nobody
> Requestors: tworkoff at firstenergycorp.com
> Status: new
> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=101728 >
>
>
> Hi all-
>
> It's been a while! I'm in the process of installing 10.0.0 (up from
9.1),
> and have run into an issue. The issue immediately displays when
running
> the basic 'make test' from the top directory, where I get this
error:
>
> cd scripts; make
> make[1]: Entering directory '/fewxops/software/met/met-
10.0.0/scripts'
>
> *** Running ASCII2NC to reformat ASCII point observations into
NetCDF ***
> ../src/tools/other/ascii2nc/ascii2nc \
> ../data/sample_obs/ascii/sample_ascii_obs.txt \
> ../out/ascii2nc/sample_ascii.nc \
> -v 2
> DEBUG 1: Config File:
/usr/local/share/met/config/Ascii2NcConfig_default
> DEBUG 2: Rejected 0 observations off the masking grid.
> DEBUG 2: Rejected 0 observations outside the masking polyline.
> DEBUG 2: Rejected 0 observations not matched with station ID's.
> DEBUG 2: Processing observations for 5 headers.
> DEBUG 1: Creating NetCDF Observation file:
../out/ascii2nc/sample_ascii.nc
> ../src/tools/other/ascii2nc/ascii2nc: symbol lookup error:
> ../src/tools/other/ascii2nc/ascii2nc: undefined symbol:
>
_ZN6netCDF6NcFileC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEENS0_8FileModeENS0_10FileFormatE
> make[1]: *** [mk/ascii2nc.mk:23: ascii2nc] Error 127
> make[1]: Leaving directory '/fewxops/software/met/met-10.0.0/scripts
> make: *** [Makefile:868: test] Error 2
>
> This was a pretty standard install into the pwd where the MET
tarbell is
> held, with the configure command of:
> ./configure --prefix=`pwd` --enable-grib2 --enable-python
> --enable-mode_graphics
>
> For the record, I attempted to run a simple point_stat analysis with
> 10.0.0, and got a similar error:
>
> fewxops/software/met/met-10.0.0/bin/point_stat
>
/fewxops/verification/data/model/grib2/feens1/2021/feens1_verify_2021101100f06.grib2
> /fewxops/verification/data/obs/met_format/madis_meso/
> mesonet_fe_2021101106.nc
> /usr/local/share/met/config/PointStatConfig_default -point_obs
> /fewxops/verification/data/obs/met_format/madis_metar/
> metar_fe_2021101106.nc
> DEBUG 1: Default Config File:
> /usr/local/share/met/config/PointStatConfig_default
> DEBUG 1: User Config File:
> /usr/local/share/met/config/PointStatConfig_default
> /fewxops/software/met/met-10.0.0/bin/point_stat: symbol lookup
error:
> /fewxops/software/met/met-10.0.0/bin/point_stat: undefined symbol:
>
_ZN6netCDF6NcFileC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEENS0_8FileModeE
>
> I have attached the configure file, make_install.log and .cshrc file
which
> governs the environmental variables for install/operations.
>
> I feel like I've seen a similar error before, in previous MET
installs,
> but I can't find anything in my note logs that helps me identify
what the
> problem may be.
> FWIW, it appears my netCDF libraries are: netcdf-c-4.6.,
> netcdf-cxx4-4.3.0, netcdf-4.6.3. Do those happen to need upgrading?
>
> As always, any help is appreciated!
>
> Thanks!
> -Tom
>
>
> [https://firstenergycorp.com/content/dam/opcologos/emailsig/FE-
logo.png]
>
> Thomas Workoff
> Sr Scientist
> office: 330-436-1475 (850-1475)
> tworkoff at firstenergycorp.com
> 341 White Pond Drive, Akron, OH 44320 | mailstop: A-WAC-C1 / AK-West
Akron
> Campus
>
>
>
>
>
>
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>
> The information contained in this message is intended only for the
> personal and confidential use of the recipient(s) named above. If
the
> reader of this message is not the intended recipient or an agent
> responsible for delivering it to the intended recipient, you are
hereby
> notified that you have received this document in error and that any
review,
> dissemination, distribution, or copying of this message is strictly
> prohibited. If you have received this communication in error, please
notify
> us immediately, and delete the original message.
>
>
--
Julie Prestopnik (she/her)
Software Engineer
National Center for Atmospheric Research
Research Applications Laboratory
Email: jpresto at ucar.edu
My working day may not be your working day. Please do not feel
obliged to
reply to this email outside of your normal working hours.
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