[Met_help] [rt.rap.ucar.edu #95229] History for Error: package or namespace load failed for "gsl"

[Tatiana Burek via RT]

----------------------------------------------------------------
  Initial Request
----------------------------------------------------------------

Hi Met Help,
I am getting this error when generating a plot on the metviewer web gui. I
have attached my XML file and copied the error message from the log to this
email.

Thank you
Donnie

Running /usr/bin/Rscript
/var/lib/tomcat6/webapps/metviewer/R_work/include/agg_stat.R
==== Start Rscript error ====
Error: package or namespace load failed for ‘gsl’:
package ‘gsl’ was installed by an R version with different internals; it
needs to be reinstalled for use with this R version
Execution halted
==== End Rscript error ====
Rscript time 0:00:00.256

Running /usr/bin/Rscript
/common/data/web/metviewer/dev/scripts/plot_20200512_123322.R
==== Start Rscript error ====
Error in file(file, "rt") : cannot open the connection
Calls: read.delim -> read.table -> file
In addition: Warning message:
In file(file, "rt") :
cannot open file
'/common/data/web/metviewer/dev/data/plot_20200512_123322.data': No such
file or directory
Execution halted
==== End Rscript error ====
Failed to create plot
/common/data/web/metviewer/dev/plots/plot_20200512_123322.png
Rscript time 0:00:00.255
-- 

Donald Lippi

*IMSG* at NOAA/NWS/NCEP/EMC


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  Complete Ticket History
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Subject: Error: package or namespace load failed for "gsl"
From: Tatiana Burek
Time: Tue May 12 07:57:05 2020

Donnie,

I suspect that some  sysadmin work was done on both vm-lnx-metviewdev
servers ~ one week ago. The  library gsl that METviewer is using is
not on the server any longer. This issue was reported to sysadmins and
hopefully will be resolved soon.
For now, I will comment out this library in METviewer code for the
user interface instance (app1). It will allow the application to work
at some capacity and you should be able to create your plot. Let me
know if this solve your problem.

Tatiana

On Tue May 12 06:44:59 2020, donald.e.lippi at noaa.gov wrote:
> Hi Met Help,
> I am getting this error when generating a plot on the metviewer web
gui. I
> have attached my XML file and copied the error message from the log
to this
> email.
>
> Thank you
> Donnie
>
> Running /usr/bin/Rscript
> /var/lib/tomcat6/webapps/metviewer/R_work/include/agg_stat.R
> ==== Start Rscript error ====
> Error: package or namespace load failed for ‘gsl’:
> package ‘gsl’ was installed by an R version with different
internals; it
> needs to be reinstalled for use with this R version
> Execution halted
> ==== End Rscript error ====
> Rscript time 0:00:00.256
>
> Running /usr/bin/Rscript
> /common/data/web/metviewer/dev/scripts/plot_20200512_123322.R
> ==== Start Rscript error ====
> Error in file(file, "rt") : cannot open the connection
> Calls: read.delim -> read.table -> file
> In addition: Warning message:
> In file(file, "rt") :
> cannot open file
> '/common/data/web/metviewer/dev/data/plot_20200512_123322.data': No
such
> file or directory
> Execution halted
> ==== End Rscript error ====
> Failed to create plot
> /common/data/web/metviewer/dev/plots/plot_20200512_123322.png
> Rscript time 0:00:00.255



------------------------------------------------
Subject: Error: package or namespace load failed for "gsl"
From: Donald Lippi - NOAA Affiliate
Time: Tue May 12 08:25:37 2020

Hi Tatiana,
I just checked. It is working now. Thank you very much!

On Tue, May 12, 2020 at 9:57 AM Tatiana Burek via RT
<met_help at ucar.edu>
wrote:

> Donnie,
>
> I suspect that some  sysadmin work was done on both vm-lnx-
metviewdev
> servers ~ one week ago. The  library gsl that METviewer is using is
not on
> the server any longer. This issue was reported to sysadmins and
hopefully
> will be resolved soon.
> For now, I will comment out this library in METviewer code for the
user
> interface instance (app1). It will allow the application to work at
some
> capacity and you should be able to create your plot. Let me know if
this
> solve your problem.
>
> Tatiana
>
> On Tue May 12 06:44:59 2020, donald.e.lippi at noaa.gov wrote:
> > Hi Met Help,
> > I am getting this error when generating a plot on the metviewer
web gui.
> I
> > have attached my XML file and copied the error message from the
log to
> this
> > email.
> >
> > Thank you
> > Donnie
> >
> > Running /usr/bin/Rscript
> > /var/lib/tomcat6/webapps/metviewer/R_work/include/agg_stat.R
> > ==== Start Rscript error ====
> > Error: package or namespace load failed for ‘gsl’:
> > package ‘gsl’ was installed by an R version with different
internals; it
> > needs to be reinstalled for use with this R version
> > Execution halted
> > ==== End Rscript error ====
> > Rscript time 0:00:00.256
> >
> > Running /usr/bin/Rscript
> > /common/data/web/metviewer/dev/scripts/plot_20200512_123322.R
> > ==== Start Rscript error ====
> > Error in file(file, "rt") : cannot open the connection
> > Calls: read.delim -> read.table -> file
> > In addition: Warning message:
> > In file(file, "rt") :
> > cannot open file
> > '/common/data/web/metviewer/dev/data/plot_20200512_123322.data':
No such
> > file or directory
> > Execution halted
> > ==== End Rscript error ====
> > Failed to create plot
> > /common/data/web/metviewer/dev/plots/plot_20200512_123322.png
> > Rscript time 0:00:00.255
>
>
>
>

--

Donald Lippi

*IMSG* at NOAA/NWS/NCEP/EMC

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