[Met_help] [rt.rap.ucar.edu #95875] History for mtd not working on cheyenne
John Halley Gotway via RT
met_help at ucar.edu
Mon Jul 20 10:47:36 MDT 2020
----------------------------------------------------------------
Initial Request
----------------------------------------------------------------
Dear MET helpdesk,
I have been using mtd for the past few months on Cheyenne, but it seems it is
not working anymore.
When I type: mtd -single wrf_file_list_2008 -config MTDConfig_r0t05v300 -outdir
mtd_out/. -log run_mtd.log -v 3
The response is:cd: Too many arguments.
Before I run the mtd command, I have loaded:module use
/glade/p/ral/jntp/MET/MET_releases/modulefilesmodule load met/8.0module load
python/2.7.14ncar_pylib
It seems mtd is not recognized. Do you know what's the problem? Thank you very
much!
Best regards,Yuxing
----------------------------------------------------------------
Complete Ticket History
----------------------------------------------------------------
Subject: mtd not working on cheyenne
From: Julie Prestopnik
Time: Fri Jul 10 10:51:32 2020
Hi Yuxing.
I see that you are having trouble running mtd on Cheyenne. Could you
please send me the paths to your files so that I can try to recreate
the
problem you are experiencing?
Thanks!
Julie
On Fri, Jul 10, 2020 at 3:09 AM yunyx at cma.gov.cn via RT
<met_help at ucar.edu>
wrote:
>
> Fri Jul 10 03:09:25 2020: Request 95875 was acted upon.
> Transaction: Ticket created by yunyx at cma.gov.cn
> Queue: met_help
> Subject: mtd not working on cheyenne
> Owner: Nobody
> Requestors: yunyx at cma.gov.cn
> Status: new
> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875 >
>
>
> Dear MET helpdesk,
> I have been using mtd for the past few months on Cheyenne, but it
seems it
> is
> not working anymore.
> When I type: mtd -single wrf_file_list_2008 -config
MTDConfig_r0t05v300
> -outdir
> mtd_out/. -log run_mtd.log -v 3
> The response is:cd: Too many arguments.
> Before I run the mtd command, I have loaded:module use
> /glade/p/ral/jntp/MET/MET_releases/modulefilesmodule load
met/8.0module
> load
> python/2.7.14ncar_pylib
> It seems mtd is not recognized. Do you know what's the problem?
Thank you
> very
> much!
> Best regards,Yuxing
>
>
>
--
Julie Prestopnik
Software Engineer
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
My working day may not be your working day. Please do not feel
obliged to
reply to this email outside of your normal working hours.
------------------------------------------------
Subject: mtd not working on cheyenne
From: Julie Prestopnik
Time: Mon Jul 13 10:08:42 2020
Hi Yuxing.
Thank you for sending your working directory. Unfortunately, Cheyenne
is
down this week:
> July 13, 2020
>
> The Cheyenne supercomputing system is unavailable this week to allow
CISL
> staff and external contractors to perform power infrastructure
repairs at
> the NCAR-Wyoming Supercomputing Center. CISL high-performance
computing
> specialists and HPE engineers will also perform several repairs and
updates
> while the system is down. The maintenance began at 5 a.m. MDT today.
The
> system is expected to be returned to service on Saturday, July 18.
>
I am out of the office most of the following week. If I am not able
to
take a look after the 18th before I leave, I will ask a colleague to
take a
look at this issue. Thank you for your patience on this issue while
we
wait for Cheyenne to return. We will follow up as soon as we are
able.
Julie
On Fri, Jul 10, 2020 at 8:18 PM yunyx at cma.gov.cn via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875 >
>
> Hi Julie,
> Thanks for helping out! My working directory is
> /glade/work/yunyx/Analysis/MODE/test. I tried to run this command:
mtd
> -single
> wrf_file_list_2008 -config MTDConfig_r0t05v300 -outdir mtd_out/.
-log
> run_mtd.log -v 3
> Cheers,YuxingOn 7/11/2020 00:56， Julie Prestopnik via
RT<met_help at ucar.edu>
> (mailto:met_help at ucar.edu)
> wrote：
>
> Hi Yuxing.
>
> I see that you are having trouble running mtd on Cheyenne. Could
you
> please send me the paths to your files so that I can try to
recreate the
> problem you are experiencing?
>
> Thanks!
>
> Julie
>
> On Fri, Jul 10, 2020 at 3:09 AM yunyx at cma.gov.cn via RT <
> met_help at ucar.edu>
> wrote:
>
>
> Fri Jul 10 03:09:25 2020: Request 95875 was acted upon.
> Transaction: Ticket created by yunyx at cma.gov.cn
> Queue: met_help
> Subject: mtd not working on cheyenne
> Owner: Nobody
> Requestors: yunyx at cma.gov.cn
> Status: new
> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875 >
>
>
> Dear MET helpdesk,
> I have been using mtd for the past few months on Cheyenne, but
it seems
> it
> is
> not working anymore.
> When I type: mtd -single wrf_file_list_2008 -config
MTDConfig_r0t05v300
> -outdir
> mtd_out/. -log run_mtd.log -v 3
> The response is:cd: Too many arguments.
> Before I run the mtd command, I have loaded:module use
> /glade/p/ral/jntp/MET/MET_releases/modulefilesmodule load
met/8.0module
> load
> python/2.7.14ncar_pylib
> It seems mtd is not recognized. Do you know what's the problem?
Thank
> you
> very
> much!
> Best regards,Yuxing
>
>
>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged to
> reply to this email outside of your normal working hours.
>
>
>
--
Julie Prestopnik
Software Engineer
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
My working day may not be your working day. Please do not feel
obliged to
reply to this email outside of your normal working hours.
------------------------------------------------
Subject: mtd not working on cheyenne
From: Julie Prestopnik
Time: Mon Jul 13 10:12:37 2020
Hi Yuxing.
Actually, I may be able to access your data through Casper and test
there,
however, I am unable to access your data due to a permissions issue:
casper01:jpresto> ls /glade/work/yunyx/Analysis/MODE/test
>
> ls: cannot access /glade/work/yunyx/Analysis/MODE/test: Permission
denied
>
Could you please open read permissions recursively in that directory
for me
so that I can access your data?
Julie
On Mon, Jul 13, 2020 at 10:08 AM Julie Prestopnik <jpresto at ucar.edu>
wrote:
> Hi Yuxing.
>
> Thank you for sending your working directory. Unfortunately,
Cheyenne is
> down this week:
>
>> July 13, 2020
>>
>> The Cheyenne supercomputing system is unavailable this week to
allow CISL
>> staff and external contractors to perform power infrastructure
repairs at
>> the NCAR-Wyoming Supercomputing Center. CISL high-performance
computing
>> specialists and HPE engineers will also perform several repairs and
updates
>> while the system is down. The maintenance began at 5 a.m. MDT
today. The
>> system is expected to be returned to service on Saturday, July 18.
>>
> I am out of the office most of the following week. If I am not able
to
> take a look after the 18th before I leave, I will ask a colleague to
take a
> look at this issue. Thank you for your patience on this issue while
we
> wait for Cheyenne to return. We will follow up as soon as we are
able.
>
> Julie
>
> On Fri, Jul 10, 2020 at 8:18 PM yunyx at cma.gov.cn via RT
<met_help at ucar.edu>
> wrote:
>
>>
>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875 >
>>
>> Hi Julie,
>> Thanks for helping out! My working directory is
>> /glade/work/yunyx/Analysis/MODE/test. I tried to run this command:
mtd
>> -single
>> wrf_file_list_2008 -config MTDConfig_r0t05v300 -outdir mtd_out/.
-log
>> run_mtd.log -v 3
>> Cheers,YuxingOn 7/11/2020 00:56， Julie Prestopnik via RT<
>> met_help at ucar.edu> (mailto:met_help at ucar.edu)
>> wrote：
>>
>> Hi Yuxing.
>>
>> I see that you are having trouble running mtd on Cheyenne. Could
you
>> please send me the paths to your files so that I can try to
recreate the
>> problem you are experiencing?
>>
>> Thanks!
>>
>> Julie
>>
>> On Fri, Jul 10, 2020 at 3:09 AM yunyx at cma.gov.cn via RT <
>> met_help at ucar.edu>
>> wrote:
>>
>>
>> Fri Jul 10 03:09:25 2020: Request 95875 was acted upon.
>> Transaction: Ticket created by yunyx at cma.gov.cn
>> Queue: met_help
>> Subject: mtd not working on cheyenne
>> Owner: Nobody
>> Requestors: yunyx at cma.gov.cn
>> Status: new
>> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875
>> >
>>
>>
>> Dear MET helpdesk,
>> I have been using mtd for the past few months on Cheyenne, but
it
>> seems
>> it
>> is
>> not working anymore.
>> When I type: mtd -single wrf_file_list_2008 -config
>> MTDConfig_r0t05v300
>> -outdir
>> mtd_out/. -log run_mtd.log -v 3
>> The response is:cd: Too many arguments.
>> Before I run the mtd command, I have loaded:module use
>> /glade/p/ral/jntp/MET/MET_releases/modulefilesmodule load
>> met/8.0module
>> load
>> python/2.7.14ncar_pylib
>> It seems mtd is not recognized. Do you know what's the problem?
Thank
>> you
>> very
>> much!
>> Best regards,Yuxing
>>
>>
>>
>>
>> --
>> Julie Prestopnik
>> Software Engineer
>> National Center for Atmospheric Research
>> Research Applications Laboratory
>> Phone: 303.497.8399
>> Email: jpresto at ucar.edu
>>
>> My working day may not be your working day. Please do not feel
obliged
>> to
>> reply to this email outside of your normal working hours.
>>
>>
>>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged to
> reply to this email outside of your normal working hours.
>
--
Julie Prestopnik
Software Engineer
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
My working day may not be your working day. Please do not feel
obliged to
reply to this email outside of your normal working hours.
------------------------------------------------
Subject: mtd not working on cheyenne
From: Julie Prestopnik
Time: Wed Jul 15 14:12:58 2020
My apologies for the delayed response. I intended to look into this
yesterday, but was unable to. I tried to work on it this morning,
but
discovered that Casper is down. I thought we would have service
restored
by now, but that is not the case. I hope the issues with Casper will
be
resolved soon. I will follow up as soon as I am able.
Julie
On Mon, Jul 13, 2020 at 8:54 PM yunyx at cma.gov.cn via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875 >
>
> Hi Julie,
> Thanks for the timely help! I have changed the permissions. Please
do not
> hesitate to let me know if there is any other issue!
> Best regards, YuxingOn 7/14/2020 00:27， Julie Prestopnik via
> RT<met_helpucar.edu> (mailto:met_help at ucar.edu) wrote：
>
> Hi Yuxing.
>
> Actually, I may be able to access your data through Casper and
test
> there,
> however, I am unable to access your data due to a permissions
issue:
>
> casper01:jpresto> ls /glade/work/yunyx/Analysis/MODE/test
>
>
> ls: cannot access /glade/work/yunyx/Analysis/MODE/test:
Permission
> denied
>
>
> Could you please open read permissions recursively in that
directory for
> me
> so that I can access your data?
>
> Julie
>
> On Mon, Jul 13, 2020 at 10:08 AM Julie Prestopnik
<jpresto at ucar.edu>
> wrote:
>
> Hi Yuxing.
>
> Thank you for sending your working directory. Unfortunately,
Cheyenne
> is
> down this week:
>
> July 13, 2020
>
> The Cheyenne supercomputing system is unavailable this week to
> allow CISL
> staff and external contractors to perform power infrastructure
> repairs at
> the NCAR-Wyoming Supercomputing Center. CISL high-performance
> computing
> specialists and HPE engineers will also perform several
repairs and
> updates
> while the system is down. The maintenance began at 5 a.m. MDT
> today. The
> system is expected to be returned to service on Saturday, July
18.
>
> I am out of the office most of the following week. If I am not
able to
> take a look after the 18th before I leave, I will ask a
colleague to
> take a
> look at this issue. Thank you for your patience on this issue
while we
> wait for Cheyenne to return. We will follow up as soon as we are
able.
>
> Julie
>
> On Fri, Jul 10, 2020 at 8:18 PM yunyx at cma.gov.cn via RT
> <met_help at ucar.edu>
> wrote:
>
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875
>
>
> Hi Julie,
> Thanks for helping out! My working directory is
> /glade/work/yunyx/Analysis/MODE/test. I tried to run this
command:
> mtd
> -single
> wrf_file_list_2008 -config MTDConfig_r0t05v300 -outdir
mtd_out/.
> -log
> run_mtd.log -v 3
> Cheers,YuxingOn 7/11/2020 00:56， Julie Prestopnik via RT<
> met_help at ucar.edu> (mailto:met_help at ucar.edu)
> wrote：
>
> Hi Yuxing.
>
> I see that you are having trouble running mtd on Cheyenne.
Could
> you
> please send me the paths to your files so that I can try to
> recreate the
> problem you are experiencing?
>
> Thanks!
>
> Julie
>
> On Fri, Jul 10, 2020 at 3:09 AM yunyx at cma.gov.cn via RT <
> met_help at ucar.edu>
> wrote:
>
>
> Fri Jul 10 03:09:25 2020: Request 95875 was acted upon.
> Transaction: Ticket created by yunyx at cma.gov.cn
> Queue: met_help
> Subject: mtd not working on cheyenne
> Owner: Nobody
> Requestors: yunyx at cma.gov.cn
> Status: new
> Ticket <URL:
> https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875
>
>
>
>
> Dear MET helpdesk,
> I have been using mtd for the past few months on Cheyenne, but
it
> seems
> it
> is
> not working anymore.
> When I type: mtd -single wrf_file_list_2008 -config
> MTDConfig_r0t05v300
> -outdir
> mtd_out/. -log run_mtd.log -v 3
> The response is:cd: Too many arguments.
> Before I run the mtd command, I have loaded:module use
> /glade/p/ral/jntp/MET/MET_releases/modulefilesmodule load
> met/8.0module
> load
> python/2.7.14ncar_pylib
> It seems mtd is not recognized. Do you know what's the
problem?
> Thank
> you
> very
> much!
> Best regards,Yuxing
>
>
>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
> obliged
> to
> reply to this email outside of your normal working hours.
>
>
>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged
> to
> reply to this email outside of your normal working hours.
>
>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged to
> reply to this email outside of your normal working hours.
>
>
>
--
Julie Prestopnik
Software Engineer
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
My working day may not be your working day. Please do not feel
obliged to
reply to this email outside of your normal working hours.
------------------------------------------------
Subject: mtd not working on cheyenne
From: Julie Prestopnik
Time: Thu Jul 16 11:40:52 2020
Hi Yuxing. I am able to access Casper now, but unfortunately I still
do
not have permission (see details of attempts below). I can only see
in
this directory "/glade/work/yunyx/", which is enough to see that the
permissions on "Analysis" are only visible by you. I believe if you
run
the following it should allow me read access at Analysis and below
recursively:
cd /glade/work/yunyx
chmod -R g+r Analysis
Please give that a try and then let me know, and I'll try to access
the
data again.
Julie
(NPL) casper26:jpresto> ls /glade/work/yunyx/Analysis/MODE/test
> ls: cannot access /glade/work/yunyx/Analysis/MODE/test: Permission
denied
> (NPL) casper26:jpresto> ls -l /glade/work/yunyx/Analysis/MODE
> ls: cannot access /glade/work/yunyx/Analysis/MODE: Permission denied
> (NPL) casper26:jpresto> ls -l /glade/work/yunyx/Analysis/
> ls: cannot open directory /glade/work/yunyx/Analysis/: Permission
denied
> (NPL) casper26:jpresto> ls -l /glade/work/yunyx/
> total 8
> drwx------ 6 yunyx ncar 4096 Sep 27 2019 Analysis
> drwx------ 5 yunyx ncar 4096 Sep 26 2019 Codes
> drwxr-xr-x 8 yunyx ncar 4096 Mar 9 2019 Data
> drwxr-xr-x 2 yunyx ncar 4096 Feb 14 03:02 For_Jasmin
> drwx------ 11 yunyx ncar 4096 Mar 13 2019 Model_Setups
> -rwxr-xr-x 1 yunyx ncar 1448 Mar 22 2019 notes
> drwxr-xr-x 4 yunyx ncar 4096 Mar 18 2019 WRF_Tar_Files
> drwxr-xr-x 17 yunyx ncar 4096 Aug 22 2018 WRFV3
On Wed, Jul 15, 2020 at 8:36 PM yunyx at cma.gov.cn via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875 >
>
> Sure, no problem! Thanks for letting me know!
> YuxingOn 7/16/2020 04:27， Julie Prestopnik via RT<met_help at ucar.edu>
> (mailto:met_help at ucar.edu)
> wrote：
>
> My apologies for the delayed response. I intended to look into
this
> yesterday, but was unable to. I tried to work on it this morning,
but
> discovered that Casper is down. I thought we would have service
restored
> by now, but that is not the case. I hope the issues with Casper
will be
> resolved soon. I will follow up as soon as I am able.
>
> Julie
>
> On Mon, Jul 13, 2020 at 8:54 PM yunyx at cma.gov.cn via RT <
> met_help at ucar.edu>
> wrote:
>
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875 >
>
> Hi Julie,
> Thanks for the timely help! I have changed the permissions.
Please do
> not
> hesitate to let me know if there is any other issue!
> Best regards, YuxingOn 7/14/2020 00:27， Julie Prestopnik via
> RT<met_helpucar.edu> (mailto:met_help at ucar.edu) wrote：
>
> Hi Yuxing.
>
> Actually, I may be able to access your data through Casper and
test
> there,
> however, I am unable to access your data due to a permissions
issue:
>
> casper01:jpresto> ls /glade/work/yunyx/Analysis/MODE/test
>
>
> ls: cannot access /glade/work/yunyx/Analysis/MODE/test:
Permission
> denied
>
>
> Could you please open read permissions recursively in that
directory
> for
> me
> so that I can access your data?
>
> Julie
>
> On Mon, Jul 13, 2020 at 10:08 AM Julie Prestopnik
<jpresto at ucar.edu>
> wrote:
>
> Hi Yuxing.
>
> Thank you for sending your working directory. Unfortunately,
Cheyenne
> is
> down this week:
>
> July 13, 2020
>
> The Cheyenne supercomputing system is unavailable this week to
> allow CISL
> staff and external contractors to perform power infrastructure
> repairs at
> the NCAR-Wyoming Supercomputing Center. CISL high-performance
> computing
> specialists and HPE engineers will also perform several repairs
and
> updates
> while the system is down. The maintenance began at 5 a.m. MDT
> today. The
> system is expected to be returned to service on Saturday, July
18.
>
> I am out of the office most of the following week. If I am not
able to
> take a look after the 18th before I leave, I will ask a
colleague to
> take a
> look at this issue. Thank you for your patience on this issue
while we
> wait for Cheyenne to return. We will follow up as soon as we are
able.
>
> Julie
>
> On Fri, Jul 10, 2020 at 8:18 PM yunyx at cma.gov.cn via RT
> <met_help at ucar.edu>
> wrote:
>
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875 >
>
> Hi Julie,
> Thanks for helping out! My working directory is
> /glade/work/yunyx/Analysis/MODE/test. I tried to run this
command:
> mtd
> -single
> wrf_file_list_2008 -config MTDConfig_r0t05v300 -outdir mtd_out/.
> -log
> run_mtd.log -v 3
> Cheers,YuxingOn 7/11/2020 00:56， Julie Prestopnik via RT<
> met_help at ucar.edu> (mailto:met_help at ucar.edu)
> wrote：
>
> Hi Yuxing.
>
> I see that you are having trouble running mtd on Cheyenne. Could
> you
> please send me the paths to your files so that I can try to
> recreate the
> problem you are experiencing?
>
> Thanks!
>
> Julie
>
> On Fri, Jul 10, 2020 at 3:09 AM yunyx at cma.gov.cn via RT <
> met_help at ucar.edu>
> wrote:
>
>
> Fri Jul 10 03:09:25 2020: Request 95875 was acted upon.
> Transaction: Ticket created by yunyx at cma.gov.cn
> Queue: met_help
> Subject: mtd not working on cheyenne
> Owner: Nobody
> Requestors: yunyx at cma.gov.cn
> Status: new
> Ticket <URL:
> https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875
>
>
>
>
> Dear MET helpdesk,
> I have been using mtd for the past few months on Cheyenne, but
it
> seems
> it
> is
> not working anymore.
> When I type: mtd -single wrf_file_list_2008 -config
> MTDConfig_r0t05v300
> -outdir
> mtd_out/. -log run_mtd.log -v 3
> The response is:cd: Too many arguments.
> Before I run the mtd command, I have loaded:module use
> /glade/p/ral/jntp/MET/MET_releases/modulefilesmodule load
> met/8.0module
> load
> python/2.7.14ncar_pylib
> It seems mtd is not recognized. Do you know what's the problem?
> Thank
> you
> very
> much!
> Best regards,Yuxing
>
>
>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
> obliged
> to
> reply to this email outside of your normal working hours.
>
>
>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged
> to
> reply to this email outside of your normal working hours.
>
>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged
> to
> reply to this email outside of your normal working hours.
>
>
>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged to
> reply to this email outside of your normal working hours.
>
>
>
--
Julie Prestopnik
Software Engineer
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
My working day may not be your working day. Please do not feel
obliged to
reply to this email outside of your normal working hours.
------------------------------------------------
Subject: mtd not working on cheyenne
From: Julie Prestopnik
Time: Fri Jul 17 11:14:11 2020
Hi Yuxing. Thank you for opening up the permissions on your
directories.
I am now able to read the data. I copied over your data
into /glade/p/ral/jntp/jpresto/met_help/yuxing_20200710/. I noticed
that
met-8.0 was not on Casper. Versions 8.1 and 9.0.3 were available on
Casper, so I tested with both of those.
Testing with 8.1, I ran the following, as you did with 8.0:
> module use /glade/p/ral/jntp/MET/MET_releases/modulefiles
> module load met/8.1
> module load python/2.7.14
> ncar_pylib
I copied over your wrf_file_list_2008 (and renamed
it wrf_file_list_2008_mod). I modified the file to list the full path
to
the files. So, instead of
"wrfout_met/2008/wrf2d_d01_APCP_01_2008050100.nc", for example, it
says
"/glade/work/yunyx/Analysis/MODE/test/wrfout_met/2008/wrf2d_d01_APCP_01_2008050100.nc".
I copied over your MTDConfig_r0t05v300 file and first, changed the
version
to "V8.1" and later to "V9.0.3".
For 8.1, I modified the command slightly, adding a "./" in front of
"mtd_out/." and pushing the output to a file, mtd_output.log:
> mtd -single wrf_file_list_2008_mod -config MTDConfig_r0t05v300
-outdir
> ./mtd_out/. -log run_mtd.log -v 3 >& mtd_output.log
The code started running and I did not receive the error "cd: Too many
arguments.".
Wondering if the changes I had made played a role in not getting the
error
that you got, I decided to copy over the data in
/glade/work/yunyx/Analysis/MODE/test/wrfout_met/2008/
to /glade/p/ral/jntp/jpresto/met_help/yuxing_20200710/wrfout_met/2008
so
that I could run your wrf_file_list_2008 as is without any changes and
decided to run with version 9.0.3.
Testing with 9.0.3, I ran the following:
> module use /glade/p/ral/jntp/MET/MET_releases/casper/modulefiles
> module load met/9.0.3
> ncar_pylib
>
Then, I changed the version in MTDConfig_r0t05v300 file to "V9.0.3"
and ran
the command exactly as you had, but still sending the screen output to
a
file:
mtd -single wrf_file_list_2008 -config MTDConfig_r0t05v300 -outdir
mtd_out/. -log run_mtd.log -v 3 >& mtd_output_test.log
The code started running and I did not receive the error "cd: Too many
arguments.".
In both cases for 8.1 and 9.0.3, the code is not yet finished running,
however, it appears to be running well. I'll keep an eye on it and
will
follow up if there is an error later.
Maybe there was an issue with your environment? Perhaps you could try
it
again either on Casper now or once Cheyenne returns next week? Once
you're
able to retry, please let us know how it goes and whether or not you
still
receive that error.
Julie
On Thu, Jul 16, 2020 at 8:16 PM yunyx at cma.gov.cn via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875 >
>
> Hi Julie,
> Sorry I didn't do it right. I have changed the permissions on
Analysis,
> and I
> think you should be able to access it now!
> Thanks!
> YuxingOn 7/17/2020 01:46， Julie Prestopnik via RT<met_help at ucar.edu>
> (mailto:met_help at ucar.edu)
> wrote：
>
> Hi Yuxing. I am able to access Casper now, but unfortunately I
still do
> not have permission (see details of attempts below). I can only
see in
> this directory "/glade/work/yunyx/", which is enough to see that
the
> permissions on "Analysis" are only visible by you. I believe if
you run
> the following it should allow me read access at Analysis and below
> recursively:
>
> cd /glade/work/yunyx
>
> chmod -R g+r Analysis
>
>
> Please give that a try and then let me know, and I'll try to
access the
> data again.
>
> Julie
>
> (NPL) casper26:jpresto> ls /glade/work/yunyx/Analysis/MODE/test
>
> ls: cannot access /glade/work/yunyx/Analysis/MODE/test:
Permission
> denied
> (NPL) casper26:jpresto> ls -l /glade/work/yunyx/Analysis/MODE
> ls: cannot access /glade/work/yunyx/Analysis/MODE: Permission
denied
> (NPL) casper26:jpresto> ls -l /glade/work/yunyx/Analysis/
> ls: cannot open directory /glade/work/yunyx/Analysis/:
Permission
> denied
> (NPL) casper26:jpresto> ls -l /glade/work/yunyx/
> total 8
> drwx------ 6 yunyx ncar 4096 Sep 27 2019 Analysis
> drwx------ 5 yunyx ncar 4096 Sep 26 2019 Codes
> drwxr-xr-x 8 yunyx ncar 4096 Mar 9 2019 Data
> drwxr-xr-x 2 yunyx ncar 4096 Feb 14 03:02 For_Jasmin
> drwx------ 11 yunyx ncar 4096 Mar 13 2019 Model_Setups
> -rwxr-xr-x 1 yunyx ncar 1448 Mar 22 2019 notes
> drwxr-xr-x 4 yunyx ncar 4096 Mar 18 2019 WRF_Tar_Files
> drwxr-xr-x 17 yunyx ncar 4096 Aug 22 2018 WRFV3
>
>
>
> On Wed, Jul 15, 2020 at 8:36 PM yunyx at cma.gov.cn via RT <
> met_help at ucar.edu>
> wrote:
>
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875 >
>
> Sure, no problem! Thanks for letting me know!
> YuxingOn 7/16/2020 04:27， Julie Prestopnik via
RT<met_help at ucar.edu>
> (mailto:met_help at ucar.edu)
> wrote：
>
> My apologies for the delayed response. I intended to look into
this
> yesterday, but was unable to. I tried to work on it this
morning, but
> discovered that Casper is down. I thought we would have service
> restored
> by now, but that is not the case. I hope the issues with Casper
will be
> resolved soon. I will follow up as soon as I am able.
>
> Julie
>
> On Mon, Jul 13, 2020 at 8:54 PM yunyx at cma.gov.cn via RT <
> met_help at ucar.edu>
> wrote:
>
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875 >
>
> Hi Julie,
> Thanks for the timely help! I have changed the permissions.
Please do
> not
> hesitate to let me know if there is any other issue!
> Best regards, YuxingOn 7/14/2020 00:27， Julie Prestopnik via
> RT<met_helpucar.edu> (mailto:met_help at ucar.edu) wrote：
>
> Hi Yuxing.
>
> Actually, I may be able to access your data through Casper and
test
> there,
> however, I am unable to access your data due to a permissions
issue:
>
> casper01:jpresto> ls /glade/work/yunyx/Analysis/MODE/test
>
>
> ls: cannot access /glade/work/yunyx/Analysis/MODE/test:
Permission
> denied
>
>
> Could you please open read permissions recursively in that
directory
> for
> me
> so that I can access your data?
>
> Julie
>
> On Mon, Jul 13, 2020 at 10:08 AM Julie Prestopnik
<jpresto at ucar.edu>
> wrote:
>
> Hi Yuxing.
>
> Thank you for sending your working directory. Unfortunately,
Cheyenne
> is
> down this week:
>
> July 13, 2020
>
> The Cheyenne supercomputing system is unavailable this week to
> allow CISL
> staff and external contractors to perform power infrastructure
> repairs at
> the NCAR-Wyoming Supercomputing Center. CISL high-performance
> computing
> specialists and HPE engineers will also perform several repairs
and
> updates
> while the system is down. The maintenance began at 5 a.m. MDT
> today. The
> system is expected to be returned to service on Saturday, July
18.
>
> I am out of the office most of the following week. If I am not
able to
> take a look after the 18th before I leave, I will ask a
colleague to
> take a
> look at this issue. Thank you for your patience on this issue
while we
> wait for Cheyenne to return. We will follow up as soon as we are
able.
>
> Julie
>
> On Fri, Jul 10, 2020 at 8:18 PM yunyx at cma.gov.cn via RT
> <met_help at ucar.edu>
> wrote:
>
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875 >
>
> Hi Julie,
> Thanks for helping out! My working directory is
> /glade/work/yunyx/Analysis/MODE/test. I tried to run this
command:
> mtd
> -single
> wrf_file_list_2008 -config MTDConfig_r0t05v300 -outdir mtd_out/.
> -log
> run_mtd.log -v 3
> Cheers,YuxingOn 7/11/2020 00:56， Julie Prestopnik via RT<
> met_help at ucar.edu> (mailto:met_help at ucar.edu)
> wrote：
>
> Hi Yuxing.
>
> I see that you are having trouble running mtd on Cheyenne. Could
> you
> please send me the paths to your files so that I can try to
> recreate the
> problem you are experiencing?
>
> Thanks!
>
> Julie
>
> On Fri, Jul 10, 2020 at 3:09 AM yunyx at cma.gov.cn via RT <
> met_help at ucar.edu>
> wrote:
>
>
> Fri Jul 10 03:09:25 2020: Request 95875 was acted upon.
> Transaction: Ticket created by yunyx at cma.gov.cn
> Queue: met_help
> Subject: mtd not working on cheyenne
> Owner: Nobody
> Requestors: yunyx at cma.gov.cn
> Status: new
> Ticket <URL:
> https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=95875
>
>
>
>
> Dear MET helpdesk,
> I have been using mtd for the past few months on Cheyenne, but
it
> seems
> it
> is
> not working anymore.
> When I type: mtd -single wrf_file_list_2008 -config
> MTDConfig_r0t05v300
> -outdir
> mtd_out/. -log run_mtd.log -v 3
> The response is:cd: Too many arguments.
> Before I run the mtd command, I have loaded:module use
> /glade/p/ral/jntp/MET/MET_releases/modulefilesmodule load
> met/8.0module
> load
> python/2.7.14ncar_pylib
> It seems mtd is not recognized. Do you know what's the problem?
> Thank
> you
> very
> much!
> Best regards,Yuxing
>
>
>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
> obliged
> to
> reply to this email outside of your normal working hours.
>
>
>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged
> to
> reply to this email outside of your normal working hours.
>
>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged
> to
> reply to this email outside of your normal working hours.
>
>
>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged
> to
> reply to this email outside of your normal working hours.
>
>
>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged to
> reply to this email outside of your normal working hours.
>
>
>
--
Julie Prestopnik
Software Engineer
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
My working day may not be your working day. Please do not feel
obliged to
reply to this email outside of your normal working hours.
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