[Met_help] [rt.rap.ucar.edu #83004] History for gen_vx_mask question; running on Theia
Julie Prestopnik via RT
met_help at ucar.edu
Wed Nov 15 09:08:37 MST 2017
----------------------------------------------------------------
Initial Request
----------------------------------------------------------------
Hello. In re running gen_vx_mask (last Monday's MET+ telecon at EMC
notes:
https://docs.google.com/document/d/1VskN4QM1_NY2oJm5xa9H-l8gLo_q4YsXmYzH7z_cOig/edit):
when I tested it last week on Tide I got this:
ST3mask=stage3_mask_ctrdef.grb
+ gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
mask_conus.nc -type data -mask_field name='"var255";level="Z0"' -thresh
ge150 -name CNSRFCS
DEBUG 1: Input File: stage3_mask_ctrdef.grb
DEBUG 1: Mask File: stage3_mask_ctrdef.grb
DEBUG 2: Parsed Data Grid: Polar Stereographic (1121 x 881)
ERROR :
ERROR : yyerror() -> syntax error in file "/tmp/config_28060_0_.temp"
ERROR :
ERROR : line = 2
ERROR :
ERROR : column = 1
ERROR :
ERROR : text = "(nul)"
ERROR :
ERROR :
ERROR : (nul)
ERROR : (nul)
ERROR :
---------------------------
Here's what's in stage3_mask_ctrdef.grb:
wgrib -V stage3_mask_ctrdef.grb
rec 1:0:date 2017110319 var255 kpds5=255 kpds6=1 kpds7=0 levels=(0,0)
grid=255 sfc 0-1hr acc:
var255=undefined
timerange 4 P1 0 P2 1 TimeU 1 nx 1121 ny 881 GDS grid 5 num_in_ave 0
missing 0
center 7 subcenter 4 process 155 Table 2 scan: WE:SN winds(grid)
polar stereo: Lat1 23.117000 Long1 -119.023000 Orient -105.000000
north pole (1121 x 881) Dx 4763 Dy 4763 scan 64 mode 8
min/max data 0 162 num bits 8 BDS_Ref 0 DecScale 0 BinScale 0
----------------------------
Thinking that it would be easier to ask the question if I run it on
Theia, I copied the setup to Theia, in
/scratch4/NCEPDEV/meso/save/Ying.Lin/met/vx_mask. When I run
'test_makemask.csh' in that directory, I get
gen_vx_mask: error while loading shared libraries: libnetcdf.so.6:
cannot open shared object file: No such file or directory
I have this in my .cshrc on Theia, following
https://dtcenter.org/met/users/support/online_tutorial/ncwcp_201704.php
module use /scratch4/BMC/dtc/MET/modulefiles
module load netcdf ncview wgrib R met/6.0
-------------------------------------------------------------
So two questions:
1) Should I set up my .cshrc differently on Theia?
2) What am I doing wrong with the gen_vx_mask example?
Thanks very much,
Ying
--
Ying Lin
NCEP/EMC/Verification, Post-processing and Product Generation Branch
NCWCP Cubicle No. 2015
Ying.Lin at noaa.gov
----------------------------------------------------------------
Complete Ticket History
----------------------------------------------------------------
Subject: gen_vx_mask question; running on Theia
From: Julie Prestopnik
Time: Tue Nov 14 09:01:08 2017
Hi Ying
I would be happy to help you. However, before I'm able to provide you
with
direct assistance, you'll need to fill out the free registration form
on
the MET website. Go to:
http://www.dtcenter.org/met/users/downloads/index.php
Enter your email address and hit enter to be taken to the registration
page. We require that all users register before receiving direct
assistance so as to ensure that we remain in compliance with the
international export laws of the United States.
Please let me know when you've registered, and I can help you with
this.
Thanks,
Julie
On Mon, Nov 13, 2017 at 2:12 PM, Ying Lin via RT <met_help at ucar.edu>
wrote:
>
> Mon Nov 13 14:12:09 2017: Request 83004 was acted upon.
> Transaction: Ticket created by ying.lin at noaa.gov
> Queue: met_help
> Subject: gen_vx_mask question; running on Theia
> Owner: Nobody
> Requestors: ying.lin at noaa.gov
> Status: new
> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
>
>
> Hello. In re running gen_vx_mask (last Monday's MET+ telecon at EMC
> notes:
> https://docs.google.com/document/d/1VskN4QM1_NY2oJm5xa9H-
> l8gLo_q4YsXmYzH7z_cOig/edit):
> when I tested it last week on Tide I got this:
>
> ST3mask=stage3_mask_ctrdef.grb
> + gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
> mask_conus.nc -type data -mask_field name='"var255";level="Z0"'
-thresh
> ge150 -name CNSRFCS
> DEBUG 1: Input File: stage3_mask_ctrdef.grb
> DEBUG 1: Mask File: stage3_mask_ctrdef.grb
> DEBUG 2: Parsed Data Grid: Polar Stereographic (1121 x 881)
> ERROR :
> ERROR : yyerror() -> syntax error in file
"/tmp/config_28060_0_.temp"
> ERROR :
> ERROR : line = 2
> ERROR :
> ERROR : column = 1
> ERROR :
> ERROR : text = "(nul)"
> ERROR :
> ERROR :
> ERROR : (nul)
> ERROR : (nul)
> ERROR :
>
> ---------------------------
>
> Here's what's in stage3_mask_ctrdef.grb:
>
> wgrib -V stage3_mask_ctrdef.grb
> rec 1:0:date 2017110319 <(201)%20711-0319> var255 kpds5=255 kpds6=1
> kpds7=0 levels=(0,0)
> grid=255 sfc 0-1hr acc:
> var255=undefined
> timerange 4 P1 0 P2 1 TimeU 1 nx 1121 ny 881 GDS grid 5
num_in_ave 0
> missing 0
> center 7 subcenter 4 process 155 Table 2 scan: WE:SN winds(grid)
> polar stereo: Lat1 23.117000 Long1 -119.023000 Orient -105.000000
> north pole (1121 x 881) Dx 4763 Dy 4763 scan 64 mode 8
> min/max data 0 162 num bits 8 BDS_Ref 0 DecScale 0 BinScale 0
> ----------------------------
>
> Thinking that it would be easier to ask the question if I run it on
> Theia, I copied the setup to Theia, in
> /scratch4/NCEPDEV/meso/save/Ying.Lin/met/vx_mask. When I run
> 'test_makemask.csh' in that directory, I get
>
> gen_vx_mask: error while loading shared libraries: libnetcdf.so.6:
> cannot open shared object file: No such file or directory
>
> I have this in my .cshrc on Theia, following
>
https://dtcenter.org/met/users/support/online_tutorial/ncwcp_201704.php
>
> module use /scratch4/BMC/dtc/MET/modulefiles
> module load netcdf ncview wgrib R met/6.0
>
> -------------------------------------------------------------
>
> So two questions:
>
> 1) Should I set up my .cshrc differently on Theia?
>
> 2) What am I doing wrong with the gen_vx_mask example?
>
> Thanks very much,
>
> Ying
>
>
>
> --
> Ying Lin
> NCEP/EMC/Verification, Post-processing and Product Generation Branch
> NCWCP Cubicle No. 2015
> Ying.Lin at noaa.gov
>
>
>
>
------------------------------------------------
Subject: Re: [rt.rap.ucar.edu #83004] gen_vx_mask question; running on Theia
From: Ying Lin
Time: Tue Nov 14 09:53:25 2017
Hi Julie,
I thought I registered as a user years ago. Thanks for providing the
registration link. I tried entering registration info several times,
from Firefox (linux) and Chrome (Windows). After entering all the
registration info and hitting 'submit' button, the form comes back
with
three entries, Affiliation Type, Country where you work, Country of
citizenship reverted back to 'Select'. Is that registration link
working?
Ying
On 11/14/2017 11:01 AM, Julie Prestopnik via RT wrote:
> Hi Ying
>
> I would be happy to help you. However, before I'm able to provide
you with
> direct assistance, you'll need to fill out the free registration
form on
> the MET website. Go to:
>
> http://www.dtcenter.org/met/users/downloads/index.php
>
> Enter your email address and hit enter to be taken to the
registration
> page. We require that all users register before receiving direct
> assistance so as to ensure that we remain in compliance with the
> international export laws of the United States.
>
> Please let me know when you've registered, and I can help you with
this.
>
> Thanks,
> Julie
>
> On Mon, Nov 13, 2017 at 2:12 PM, Ying Lin via RT <met_help at ucar.edu>
wrote:
>
>> Mon Nov 13 14:12:09 2017: Request 83004 was acted upon.
>> Transaction: Ticket created by ying.lin at noaa.gov
>> Queue: met_help
>> Subject: gen_vx_mask question; running on Theia
>> Owner: Nobody
>> Requestors: ying.lin at noaa.gov
>> Status: new
>> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
>>
>>
>> Hello. In re running gen_vx_mask (last Monday's MET+ telecon at
EMC
>> notes:
>> https://docs.google.com/document/d/1VskN4QM1_NY2oJm5xa9H-
>> l8gLo_q4YsXmYzH7z_cOig/edit):
>> when I tested it last week on Tide I got this:
>>
>> ST3mask=stage3_mask_ctrdef.grb
>> + gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
>> mask_conus.nc -type data -mask_field name='"var255";level="Z0"'
-thresh
>> ge150 -name CNSRFCS
>> DEBUG 1: Input File: stage3_mask_ctrdef.grb
>> DEBUG 1: Mask File: stage3_mask_ctrdef.grb
>> DEBUG 2: Parsed Data Grid: Polar Stereographic (1121 x 881)
>> ERROR :
>> ERROR : yyerror() -> syntax error in file
"/tmp/config_28060_0_.temp"
>> ERROR :
>> ERROR : line = 2
>> ERROR :
>> ERROR : column = 1
>> ERROR :
>> ERROR : text = "(nul)"
>> ERROR :
>> ERROR :
>> ERROR : (nul)
>> ERROR : (nul)
>> ERROR :
>>
>> ---------------------------
>>
>> Here's what's in stage3_mask_ctrdef.grb:
>>
>> wgrib -V stage3_mask_ctrdef.grb
>> rec 1:0:date 2017110319 <(201)%20711-0319> var255 kpds5=255 kpds6=1
>> kpds7=0 levels=(0,0)
>> grid=255 sfc 0-1hr acc:
>> var255=undefined
>> timerange 4 P1 0 P2 1 TimeU 1 nx 1121 ny 881 GDS grid 5
num_in_ave 0
>> missing 0
>> center 7 subcenter 4 process 155 Table 2 scan: WE:SN
winds(grid)
>> polar stereo: Lat1 23.117000 Long1 -119.023000 Orient
-105.000000
>> north pole (1121 x 881) Dx 4763 Dy 4763 scan 64 mode 8
>> min/max data 0 162 num bits 8 BDS_Ref 0 DecScale 0 BinScale
0
>> ----------------------------
>>
>> Thinking that it would be easier to ask the question if I run it on
>> Theia, I copied the setup to Theia, in
>> /scratch4/NCEPDEV/meso/save/Ying.Lin/met/vx_mask. When I run
>> 'test_makemask.csh' in that directory, I get
>>
>> gen_vx_mask: error while loading shared libraries: libnetcdf.so.6:
>> cannot open shared object file: No such file or directory
>>
>> I have this in my .cshrc on Theia, following
>>
https://dtcenter.org/met/users/support/online_tutorial/ncwcp_201704.php
>>
>> module use /scratch4/BMC/dtc/MET/modulefiles
>> module load netcdf ncview wgrib R met/6.0
>>
>> -------------------------------------------------------------
>>
>> So two questions:
>>
>> 1) Should I set up my .cshrc differently on Theia?
>>
>> 2) What am I doing wrong with the gen_vx_mask example?
>>
>> Thanks very much,
>>
>> Ying
>>
>>
>>
>> --
>> Ying Lin
>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
>> NCWCP Cubicle No. 2015
>> Ying.Lin at noaa.gov
>>
>>
>>
>>
--
Ying Lin
NCEP/EMC/Verification, Post-processing and Product Generation Branch
NCWCP Cubicle No. 2015
Ying.Lin at noaa.gov
------------------------------------------------
Subject: gen_vx_mask question; running on Theia
From: John Halley Gotway
Time: Tue Nov 14 13:15:11 2017
Hi Ying,
I just tested the form and was able to create a new registration. The
form
requires that all fields be filled out. If any are left blank, it
returns
with an error message:
All Fields Below Are Required. Please Try Again.
Please try again, being sure to fill out all the fields.
Thanks!
John
On Tue, Nov 14, 2017 at 9:53 AM, Ying Lin via RT <met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
>
> Hi Julie,
>
> I thought I registered as a user years ago. Thanks for providing
the
> registration link. I tried entering registration info several
times,
> from Firefox (linux) and Chrome (Windows). After entering all the
> registration info and hitting 'submit' button, the form comes back
with
> three entries, Affiliation Type, Country where you work, Country of
> citizenship reverted back to 'Select'. Is that registration link
working?
>
> Ying
>
> On 11/14/2017 11:01 AM, Julie Prestopnik via RT wrote:
> > Hi Ying
> >
> > I would be happy to help you. However, before I'm able to provide
you
> with
> > direct assistance, you'll need to fill out the free registration
form on
> > the MET website. Go to:
> >
> > http://www.dtcenter.org/met/users/downloads/index.php
> >
> > Enter your email address and hit enter to be taken to the
registration
> > page. We require that all users register before receiving direct
> > assistance so as to ensure that we remain in compliance with the
> > international export laws of the United States.
> >
> > Please let me know when you've registered, and I can help you with
this.
> >
> > Thanks,
> > Julie
> >
> > On Mon, Nov 13, 2017 at 2:12 PM, Ying Lin via RT
<met_help at ucar.edu>
> wrote:
> >
> >> Mon Nov 13 14:12:09 2017: Request 83004 was acted upon.
> >> Transaction: Ticket created by ying.lin at noaa.gov
> >> Queue: met_help
> >> Subject: gen_vx_mask question; running on Theia
> >> Owner: Nobody
> >> Requestors: ying.lin at noaa.gov
> >> Status: new
> >> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004
> >
> >>
> >>
> >> Hello. In re running gen_vx_mask (last Monday's MET+ telecon at
EMC
> >> notes:
> >> https://docs.google.com/document/d/1VskN4QM1_NY2oJm5xa9H-
> >> l8gLo_q4YsXmYzH7z_cOig/edit):
> >> when I tested it last week on Tide I got this:
> >>
> >> ST3mask=stage3_mask_ctrdef.grb
> >> + gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
> >> mask_conus.nc -type data -mask_field name='"var255";level="Z0"'
-thresh
> >> ge150 -name CNSRFCS
> >> DEBUG 1: Input File: stage3_mask_ctrdef.grb
> >> DEBUG 1: Mask File: stage3_mask_ctrdef.grb
> >> DEBUG 2: Parsed Data Grid: Polar Stereographic (1121 x 881)
> >> ERROR :
> >> ERROR : yyerror() -> syntax error in file
"/tmp/config_28060_0_.temp"
> >> ERROR :
> >> ERROR : line = 2
> >> ERROR :
> >> ERROR : column = 1
> >> ERROR :
> >> ERROR : text = "(nul)"
> >> ERROR :
> >> ERROR :
> >> ERROR : (nul)
> >> ERROR : (nul)
> >> ERROR :
> >>
> >> ---------------------------
> >>
> >> Here's what's in stage3_mask_ctrdef.grb:
> >>
> >> wgrib -V stage3_mask_ctrdef.grb
> >> rec 1:0:date 2017110319 <(201)%20711-0319> var255 kpds5=255
kpds6=1
> >> kpds7=0 levels=(0,0)
> >> grid=255 sfc 0-1hr acc:
> >> var255=undefined
> >> timerange 4 P1 0 P2 1 TimeU 1 nx 1121 ny 881 GDS grid 5
num_in_ave
> 0
> >> missing 0
> >> center 7 subcenter 4 process 155 Table 2 scan: WE:SN
winds(grid)
> >> polar stereo: Lat1 23.117000 Long1 -119.023000 Orient
-105.000000
> >> north pole (1121 x 881) Dx 4763 Dy 4763 scan 64 mode 8
> >> min/max data 0 162 num bits 8 BDS_Ref 0 DecScale 0
BinScale 0
> >> ----------------------------
> >>
> >> Thinking that it would be easier to ask the question if I run it
on
> >> Theia, I copied the setup to Theia, in
> >> /scratch4/NCEPDEV/meso/save/Ying.Lin/met/vx_mask. When I run
> >> 'test_makemask.csh' in that directory, I get
> >>
> >> gen_vx_mask: error while loading shared libraries:
libnetcdf.so.6:
> >> cannot open shared object file: No such file or directory
> >>
> >> I have this in my .cshrc on Theia, following
> >>
https://dtcenter.org/met/users/support/online_tutorial/ncwcp_201704.php
> >>
> >> module use /scratch4/BMC/dtc/MET/modulefiles
> >> module load netcdf ncview wgrib R met/6.0
> >>
> >> -------------------------------------------------------------
> >>
> >> So two questions:
> >>
> >> 1) Should I set up my .cshrc differently on Theia?
> >>
> >> 2) What am I doing wrong with the gen_vx_mask example?
> >>
> >> Thanks very much,
> >>
> >> Ying
> >>
> >>
> >>
> >> --
> >> Ying Lin
> >> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
> >> NCWCP Cubicle No. 2015
> >> Ying.Lin at noaa.gov
> >>
> >>
> >>
> >>
>
> --
> Ying Lin
> NCEP/EMC/Verification, Post-processing and Product Generation Branch
> NCWCP Cubicle No. 2015
> Ying.Lin at noaa.gov
>
>
>
>
------------------------------------------------
Subject: gen_vx_mask question; running on Theia
From: Ying Lin
Time: Tue Nov 14 13:31:31 2017
Hi John,
I did fill out all those fields. After hitting submit the three
fields listed in my original email become blank again (showing
'Select'). If I refill/re-select these three fields and hit 'submit',
the same thing happens - see the attached two screen-shots taken
before
and after 'submit'. I just tried again, twice, same result. I do
know
what the "All Fields Below Are Required. Please Try Again."looks like
(tried that several times too) but this is not the case here. After
filling out all the fields and hit 'submit', is it supposed to go to
another page? I tried this multiple times this morning on both
Firefox
and Chrome, always the same thing. Any ideas on how to proceed from
here?
Thanks,
Ying
On 11/14/2017 03:15 PM, John Halley Gotway via RT wrote:
> Hi Ying,
>
> I just tested the form and was able to create a new registration.
The form
> requires that all fields be filled out. If any are left blank, it
returns
> with an error message:
> All Fields Below Are Required. Please Try Again.
>
> Please try again, being sure to fill out all the fields.
>
> Thanks!
>
> John
>
> On Tue, Nov 14, 2017 at 9:53 AM, Ying Lin via RT <met_help at ucar.edu>
wrote:
>
>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
>>
>> Hi Julie,
>>
>> I thought I registered as a user years ago. Thanks for providing
the
>> registration link. I tried entering registration info several
times,
>> from Firefox (linux) and Chrome (Windows). After entering all the
>> registration info and hitting 'submit' button, the form comes back
with
>> three entries, Affiliation Type, Country where you work, Country of
>> citizenship reverted back to 'Select'. Is that registration link
working?
>>
>> Ying
>>
>> On 11/14/2017 11:01 AM, Julie Prestopnik via RT wrote:
>>> Hi Ying
>>>
>>> I would be happy to help you. However, before I'm able to provide
you
>> with
>>> direct assistance, you'll need to fill out the free registration
form on
>>> the MET website. Go to:
>>>
>>> http://www.dtcenter.org/met/users/downloads/index.php
>>>
>>> Enter your email address and hit enter to be taken to the
registration
>>> page. We require that all users register before receiving direct
>>> assistance so as to ensure that we remain in compliance with the
>>> international export laws of the United States.
>>>
>>> Please let me know when you've registered, and I can help you with
this.
>>>
>>> Thanks,
>>> Julie
>>>
>>> On Mon, Nov 13, 2017 at 2:12 PM, Ying Lin via RT
<met_help at ucar.edu>
>> wrote:
>>>> Mon Nov 13 14:12:09 2017: Request 83004 was acted upon.
>>>> Transaction: Ticket created by ying.lin at noaa.gov
>>>> Queue: met_help
>>>> Subject: gen_vx_mask question; running on Theia
>>>> Owner: Nobody
>>>> Requestors: ying.lin at noaa.gov
>>>> Status: new
>>>> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004
>>>>
>>>> Hello. In re running gen_vx_mask (last Monday's MET+ telecon at
EMC
>>>> notes:
>>>> https://docs.google.com/document/d/1VskN4QM1_NY2oJm5xa9H-
>>>> l8gLo_q4YsXmYzH7z_cOig/edit):
>>>> when I tested it last week on Tide I got this:
>>>>
>>>> ST3mask=stage3_mask_ctrdef.grb
>>>> + gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
>>>> mask_conus.nc -type data -mask_field name='"var255";level="Z0"'
-thresh
>>>> ge150 -name CNSRFCS
>>>> DEBUG 1: Input File: stage3_mask_ctrdef.grb
>>>> DEBUG 1: Mask File: stage3_mask_ctrdef.grb
>>>> DEBUG 2: Parsed Data Grid: Polar Stereographic (1121 x 881)
>>>> ERROR :
>>>> ERROR : yyerror() -> syntax error in file
"/tmp/config_28060_0_.temp"
>>>> ERROR :
>>>> ERROR : line = 2
>>>> ERROR :
>>>> ERROR : column = 1
>>>> ERROR :
>>>> ERROR : text = "(nul)"
>>>> ERROR :
>>>> ERROR :
>>>> ERROR : (nul)
>>>> ERROR : (nul)
>>>> ERROR :
>>>>
>>>> ---------------------------
>>>>
>>>> Here's what's in stage3_mask_ctrdef.grb:
>>>>
>>>> wgrib -V stage3_mask_ctrdef.grb
>>>> rec 1:0:date 2017110319 <(201)%20711-0319> var255 kpds5=255
kpds6=1
>>>> kpds7=0 levels=(0,0)
>>>> grid=255 sfc 0-1hr acc:
>>>> var255=undefined
>>>> timerange 4 P1 0 P2 1 TimeU 1 nx 1121 ny 881 GDS grid 5
num_in_ave
>> 0
>>>> missing 0
>>>> center 7 subcenter 4 process 155 Table 2 scan: WE:SN
winds(grid)
>>>> polar stereo: Lat1 23.117000 Long1 -119.023000 Orient
-105.000000
>>>> north pole (1121 x 881) Dx 4763 Dy 4763 scan 64 mode 8
>>>> min/max data 0 162 num bits 8 BDS_Ref 0 DecScale 0
BinScale 0
>>>> ----------------------------
>>>>
>>>> Thinking that it would be easier to ask the question if I run it
on
>>>> Theia, I copied the setup to Theia, in
>>>> /scratch4/NCEPDEV/meso/save/Ying.Lin/met/vx_mask. When I run
>>>> 'test_makemask.csh' in that directory, I get
>>>>
>>>> gen_vx_mask: error while loading shared libraries:
libnetcdf.so.6:
>>>> cannot open shared object file: No such file or directory
>>>>
>>>> I have this in my .cshrc on Theia, following
>>>>
https://dtcenter.org/met/users/support/online_tutorial/ncwcp_201704.php
>>>>
>>>> module use /scratch4/BMC/dtc/MET/modulefiles
>>>> module load netcdf ncview wgrib R met/6.0
>>>>
>>>> -------------------------------------------------------------
>>>>
>>>> So two questions:
>>>>
>>>> 1) Should I set up my .cshrc differently on Theia?
>>>>
>>>> 2) What am I doing wrong with the gen_vx_mask example?
>>>>
>>>> Thanks very much,
>>>>
>>>> Ying
>>>>
>>>>
>>>>
>>>> --
>>>> Ying Lin
>>>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
>>>> NCWCP Cubicle No. 2015
>>>> Ying.Lin at noaa.gov
>>>>
>>>>
>>>>
>>>>
>> --
>> Ying Lin
>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
>> NCWCP Cubicle No. 2015
>> Ying.Lin at noaa.gov
>>
>>
>>
>>
--
Ying Lin
NCEP/EMC/Verification, Post-processing and Product Generation Branch
NCWCP Cubicle No. 2015
Ying.Lin at noaa.gov
------------------------------------------------
Subject: gen_vx_mask question; running on Theia
From: John Halley Gotway
Time: Tue Nov 14 13:49:09 2017
Ying,
OK, I figured it out. It was the *** int'l *** in the "Intended MET
Software Use" box. Having the single tick in that string messed up
the PHP
code.
Thanks for letting us know about this! After removing the single
quote, I
was able to get the registration to stick.
Julie... Ying is now registered. Please proceed :)
Thanks for bearing with us Ying!
John
On Tue, Nov 14, 2017 at 1:31 PM, Ying Lin via RT <met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
>
> Hi John,
>
> I did fill out all those fields. After hitting submit the
three
> fields listed in my original email become blank again (showing
> 'Select'). If I refill/re-select these three fields and hit
'submit',
> the same thing happens - see the attached two screen-shots taken
before
> and after 'submit'. I just tried again, twice, same result. I do
know
> what the "All Fields Below Are Required. Please Try Again."looks
like
> (tried that several times too) but this is not the case here. After
> filling out all the fields and hit 'submit', is it supposed to go to
> another page? I tried this multiple times this morning on both
Firefox
> and Chrome, always the same thing. Any ideas on how to proceed from
here?
>
> Thanks,
>
> Ying
>
> On 11/14/2017 03:15 PM, John Halley Gotway via RT wrote:
> > Hi Ying,
> >
> > I just tested the form and was able to create a new registration.
The
> form
> > requires that all fields be filled out. If any are left blank, it
> returns
> > with an error message:
> > All Fields Below Are Required. Please Try Again.
> >
> > Please try again, being sure to fill out all the fields.
> >
> > Thanks!
> >
> > John
> >
> > On Tue, Nov 14, 2017 at 9:53 AM, Ying Lin via RT
<met_help at ucar.edu>
> wrote:
> >
> >> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
> >>
> >> Hi Julie,
> >>
> >> I thought I registered as a user years ago. Thanks for providing
the
> >> registration link. I tried entering registration info several
times,
> >> from Firefox (linux) and Chrome (Windows). After entering all
the
> >> registration info and hitting 'submit' button, the form comes
back with
> >> three entries, Affiliation Type, Country where you work, Country
of
> >> citizenship reverted back to 'Select'. Is that registration link
> working?
> >>
> >> Ying
> >>
> >> On 11/14/2017 11:01 AM, Julie Prestopnik via RT wrote:
> >>> Hi Ying
> >>>
> >>> I would be happy to help you. However, before I'm able to
provide you
> >> with
> >>> direct assistance, you'll need to fill out the free registration
form
> on
> >>> the MET website. Go to:
> >>>
> >>> http://www.dtcenter.org/met/users/downloads/index.php
> >>>
> >>> Enter your email address and hit enter to be taken to the
registration
> >>> page. We require that all users register before receiving
direct
> >>> assistance so as to ensure that we remain in compliance with the
> >>> international export laws of the United States.
> >>>
> >>> Please let me know when you've registered, and I can help you
with
> this.
> >>>
> >>> Thanks,
> >>> Julie
> >>>
> >>> On Mon, Nov 13, 2017 at 2:12 PM, Ying Lin via RT
<met_help at ucar.edu>
> >> wrote:
> >>>> Mon Nov 13 14:12:09 2017: Request 83004 was acted upon.
> >>>> Transaction: Ticket created by ying.lin at noaa.gov
> >>>> Queue: met_help
> >>>> Subject: gen_vx_mask question; running on Theia
> >>>> Owner: Nobody
> >>>> Requestors: ying.lin at noaa.gov
> >>>> Status: new
> >>>> Ticket <URL: https://rt.rap.ucar.edu/rt/
> Ticket/Display.html?id=83004
> >>>>
> >>>> Hello. In re running gen_vx_mask (last Monday's MET+ telecon
at EMC
> >>>> notes:
> >>>> https://docs.google.com/document/d/1VskN4QM1_NY2oJm5xa9H-
> >>>> l8gLo_q4YsXmYzH7z_cOig/edit):
> >>>> when I tested it last week on Tide I got this:
> >>>>
> >>>> ST3mask=stage3_mask_ctrdef.grb
> >>>> + gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
> >>>> mask_conus.nc -type data -mask_field name='"var255";level="Z0"'
> -thresh
> >>>> ge150 -name CNSRFCS
> >>>> DEBUG 1: Input File: stage3_mask_ctrdef.grb
> >>>> DEBUG 1: Mask File: stage3_mask_ctrdef.grb
> >>>> DEBUG 2: Parsed Data Grid: Polar Stereographic (1121 x 881)
> >>>> ERROR :
> >>>> ERROR : yyerror() -> syntax error in file
"/tmp/config_28060_0_.temp"
> >>>> ERROR :
> >>>> ERROR : line = 2
> >>>> ERROR :
> >>>> ERROR : column = 1
> >>>> ERROR :
> >>>> ERROR : text = "(nul)"
> >>>> ERROR :
> >>>> ERROR :
> >>>> ERROR : (nul)
> >>>> ERROR : (nul)
> >>>> ERROR :
> >>>>
> >>>> ---------------------------
> >>>>
> >>>> Here's what's in stage3_mask_ctrdef.grb:
> >>>>
> >>>> wgrib -V stage3_mask_ctrdef.grb
> >>>> rec 1:0:date 2017110319 <(201)%20711-0319> var255 kpds5=255
kpds6=1
> >>>> kpds7=0 levels=(0,0)
> >>>> grid=255 sfc 0-1hr acc:
> >>>> var255=undefined
> >>>> timerange 4 P1 0 P2 1 TimeU 1 nx 1121 ny 881 GDS grid 5
> num_in_ave
> >> 0
> >>>> missing 0
> >>>> center 7 subcenter 4 process 155 Table 2 scan: WE:SN
winds(grid)
> >>>> polar stereo: Lat1 23.117000 Long1 -119.023000 Orient
-105.000000
> >>>> north pole (1121 x 881) Dx 4763 Dy 4763 scan 64 mode 8
> >>>> min/max data 0 162 num bits 8 BDS_Ref 0 DecScale 0
BinScale 0
> >>>> ----------------------------
> >>>>
> >>>> Thinking that it would be easier to ask the question if I run
it on
> >>>> Theia, I copied the setup to Theia, in
> >>>> /scratch4/NCEPDEV/meso/save/Ying.Lin/met/vx_mask. When I run
> >>>> 'test_makemask.csh' in that directory, I get
> >>>>
> >>>> gen_vx_mask: error while loading shared libraries:
libnetcdf.so.6:
> >>>> cannot open shared object file: No such file or directory
> >>>>
> >>>> I have this in my .cshrc on Theia, following
> >>>> https://dtcenter.org/met/users/support/online_tutorial/
> ncwcp_201704.php
> >>>>
> >>>> module use /scratch4/BMC/dtc/MET/modulefiles
> >>>> module load netcdf ncview wgrib R met/6.0
> >>>>
> >>>> -------------------------------------------------------------
> >>>>
> >>>> So two questions:
> >>>>
> >>>> 1) Should I set up my .cshrc differently on Theia?
> >>>>
> >>>> 2) What am I doing wrong with the gen_vx_mask example?
> >>>>
> >>>> Thanks very much,
> >>>>
> >>>> Ying
> >>>>
> >>>>
> >>>>
> >>>> --
> >>>> Ying Lin
> >>>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
> >>>> NCWCP Cubicle No. 2015
> >>>> Ying.Lin at noaa.gov
> >>>>
> >>>>
> >>>>
> >>>>
> >> --
> >> Ying Lin
> >> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
> >> NCWCP Cubicle No. 2015
> >> Ying.Lin at noaa.gov
> >>
> >>
> >>
> >>
>
> --
> Ying Lin
> NCEP/EMC/Verification, Post-processing and Product Generation Branch
> NCWCP Cubicle No. 2015
> Ying.Lin at noaa.gov
>
>
>
>
------------------------------------------------
Subject: Re: [rt.rap.ucar.edu #83004] gen_vx_mask question; running on Theia
From: Ying Lin
Time: Tue Nov 14 13:56:04 2017
John, thanks for figuring this out quickly! I remember a long time
ago
that a quote (maybe it was a double quote for 'inches') that caused a
problem with MetViewer title. Will try to remember to avoid quotes in
both PHP and R-related applications.
Ying
On 11/14/2017 03:49 PM, John Halley Gotway via RT wrote:
> Ying,
>
> OK, I figured it out. It was the *** int'l *** in the "Intended MET
> Software Use" box. Having the single tick in that string messed up
the PHP
> code.
>
> Thanks for letting us know about this! After removing the single
quote, I
> was able to get the registration to stick.
>
> Julie... Ying is now registered. Please proceed :)
>
> Thanks for bearing with us Ying!
>
> John
>
> On Tue, Nov 14, 2017 at 1:31 PM, Ying Lin via RT <met_help at ucar.edu>
wrote:
>
>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
>>
>> Hi John,
>>
>> I did fill out all those fields. After hitting submit the
three
>> fields listed in my original email become blank again (showing
>> 'Select'). If I refill/re-select these three fields and hit
'submit',
>> the same thing happens - see the attached two screen-shots taken
before
>> and after 'submit'. I just tried again, twice, same result. I do
know
>> what the "All Fields Below Are Required. Please Try Again."looks
like
>> (tried that several times too) but this is not the case here. After
>> filling out all the fields and hit 'submit', is it supposed to go
to
>> another page? I tried this multiple times this morning on both
Firefox
>> and Chrome, always the same thing. Any ideas on how to proceed
from here?
>>
>> Thanks,
>>
>> Ying
>>
>> On 11/14/2017 03:15 PM, John Halley Gotway via RT wrote:
>>> Hi Ying,
>>>
>>> I just tested the form and was able to create a new registration.
The
>> form
>>> requires that all fields be filled out. If any are left blank, it
>> returns
>>> with an error message:
>>> All Fields Below Are Required. Please Try Again.
>>>
>>> Please try again, being sure to fill out all the fields.
>>>
>>> Thanks!
>>>
>>> John
>>>
>>> On Tue, Nov 14, 2017 at 9:53 AM, Ying Lin via RT
<met_help at ucar.edu>
>> wrote:
>>>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
>>>>
>>>> Hi Julie,
>>>>
>>>> I thought I registered as a user years ago. Thanks for providing
the
>>>> registration link. I tried entering registration info several
times,
>>>> from Firefox (linux) and Chrome (Windows). After entering all
the
>>>> registration info and hitting 'submit' button, the form comes
back with
>>>> three entries, Affiliation Type, Country where you work, Country
of
>>>> citizenship reverted back to 'Select'. Is that registration link
>> working?
>>>> Ying
>>>>
>>>> On 11/14/2017 11:01 AM, Julie Prestopnik via RT wrote:
>>>>> Hi Ying
>>>>>
>>>>> I would be happy to help you. However, before I'm able to
provide you
>>>> with
>>>>> direct assistance, you'll need to fill out the free registration
form
>> on
>>>>> the MET website. Go to:
>>>>>
>>>>> http://www.dtcenter.org/met/users/downloads/index.php
>>>>>
>>>>> Enter your email address and hit enter to be taken to the
registration
>>>>> page. We require that all users register before receiving
direct
>>>>> assistance so as to ensure that we remain in compliance with the
>>>>> international export laws of the United States.
>>>>>
>>>>> Please let me know when you've registered, and I can help you
with
>> this.
>>>>> Thanks,
>>>>> Julie
>>>>>
>>>>> On Mon, Nov 13, 2017 at 2:12 PM, Ying Lin via RT
<met_help at ucar.edu>
>>>> wrote:
>>>>>> Mon Nov 13 14:12:09 2017: Request 83004 was acted upon.
>>>>>> Transaction: Ticket created by ying.lin at noaa.gov
>>>>>> Queue: met_help
>>>>>> Subject: gen_vx_mask question; running on Theia
>>>>>> Owner: Nobody
>>>>>> Requestors: ying.lin at noaa.gov
>>>>>> Status: new
>>>>>> Ticket <URL: https://rt.rap.ucar.edu/rt/
>> Ticket/Display.html?id=83004
>>>>>> Hello. In re running gen_vx_mask (last Monday's MET+ telecon
at EMC
>>>>>> notes:
>>>>>> https://docs.google.com/document/d/1VskN4QM1_NY2oJm5xa9H-
>>>>>> l8gLo_q4YsXmYzH7z_cOig/edit):
>>>>>> when I tested it last week on Tide I got this:
>>>>>>
>>>>>> ST3mask=stage3_mask_ctrdef.grb
>>>>>> + gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
>>>>>> mask_conus.nc -type data -mask_field name='"var255";level="Z0"'
>> -thresh
>>>>>> ge150 -name CNSRFCS
>>>>>> DEBUG 1: Input File: stage3_mask_ctrdef.grb
>>>>>> DEBUG 1: Mask File: stage3_mask_ctrdef.grb
>>>>>> DEBUG 2: Parsed Data Grid: Polar Stereographic (1121 x 881)
>>>>>> ERROR :
>>>>>> ERROR : yyerror() -> syntax error in file
"/tmp/config_28060_0_.temp"
>>>>>> ERROR :
>>>>>> ERROR : line = 2
>>>>>> ERROR :
>>>>>> ERROR : column = 1
>>>>>> ERROR :
>>>>>> ERROR : text = "(nul)"
>>>>>> ERROR :
>>>>>> ERROR :
>>>>>> ERROR : (nul)
>>>>>> ERROR : (nul)
>>>>>> ERROR :
>>>>>>
>>>>>> ---------------------------
>>>>>>
>>>>>> Here's what's in stage3_mask_ctrdef.grb:
>>>>>>
>>>>>> wgrib -V stage3_mask_ctrdef.grb
>>>>>> rec 1:0:date 2017110319 <(201)%20711-0319> var255 kpds5=255
kpds6=1
>>>>>> kpds7=0 levels=(0,0)
>>>>>> grid=255 sfc 0-1hr acc:
>>>>>> var255=undefined
>>>>>> timerange 4 P1 0 P2 1 TimeU 1 nx 1121 ny 881 GDS grid 5
>> num_in_ave
>>>> 0
>>>>>> missing 0
>>>>>> center 7 subcenter 4 process 155 Table 2 scan: WE:SN
winds(grid)
>>>>>> polar stereo: Lat1 23.117000 Long1 -119.023000 Orient
-105.000000
>>>>>> north pole (1121 x 881) Dx 4763 Dy 4763 scan 64 mode 8
>>>>>> min/max data 0 162 num bits 8 BDS_Ref 0 DecScale 0
BinScale 0
>>>>>> ----------------------------
>>>>>>
>>>>>> Thinking that it would be easier to ask the question if I run
it on
>>>>>> Theia, I copied the setup to Theia, in
>>>>>> /scratch4/NCEPDEV/meso/save/Ying.Lin/met/vx_mask. When I run
>>>>>> 'test_makemask.csh' in that directory, I get
>>>>>>
>>>>>> gen_vx_mask: error while loading shared libraries:
libnetcdf.so.6:
>>>>>> cannot open shared object file: No such file or directory
>>>>>>
>>>>>> I have this in my .cshrc on Theia, following
>>>>>> https://dtcenter.org/met/users/support/online_tutorial/
>> ncwcp_201704.php
>>>>>> module use /scratch4/BMC/dtc/MET/modulefiles
>>>>>> module load netcdf ncview wgrib R met/6.0
>>>>>>
>>>>>> -------------------------------------------------------------
>>>>>>
>>>>>> So two questions:
>>>>>>
>>>>>> 1) Should I set up my .cshrc differently on Theia?
>>>>>>
>>>>>> 2) What am I doing wrong with the gen_vx_mask example?
>>>>>>
>>>>>> Thanks very much,
>>>>>>
>>>>>> Ying
>>>>>>
>>>>>>
>>>>>>
>>>>>> --
>>>>>> Ying Lin
>>>>>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
>>>>>> NCWCP Cubicle No. 2015
>>>>>> Ying.Lin at noaa.gov
>>>>>>
>>>>>>
>>>>>>
>>>>>>
>>>> --
>>>> Ying Lin
>>>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
>>>> NCWCP Cubicle No. 2015
>>>> Ying.Lin at noaa.gov
>>>>
>>>>
>>>>
>>>>
>> --
>> Ying Lin
>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
>> NCWCP Cubicle No. 2015
>> Ying.Lin at noaa.gov
>>
>>
>>
>>
--
Ying Lin
NCEP/EMC/Verification, Post-processing and Product Generation Branch
NCWCP Cubicle No. 2015
Ying.Lin at noaa.gov
------------------------------------------------
Subject: gen_vx_mask question; running on Theia
From: John Halley Gotway
Time: Tue Nov 14 13:58:19 2017
Ying,
Tatiana added logic in METViewer to allow for single and double quotes
within strings. So that *should* work fine now. I created a ticket
to
track down the PHP problem at some point. I took a quick look but the
problem isn't immediately obvious.
Thanks,
John
On Tue, Nov 14, 2017 at 1:56 PM, Ying Lin via RT <met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
>
> John, thanks for figuring this out quickly! I remember a long time
ago
> that a quote (maybe it was a double quote for 'inches') that caused
a
> problem with MetViewer title. Will try to remember to avoid quotes
in
> both PHP and R-related applications.
> Ying
>
> On 11/14/2017 03:49 PM, John Halley Gotway via RT wrote:
> > Ying,
> >
> > OK, I figured it out. It was the *** int'l *** in the "Intended
MET
> > Software Use" box. Having the single tick in that string messed
up the
> PHP
> > code.
> >
> > Thanks for letting us know about this! After removing the single
quote,
> I
> > was able to get the registration to stick.
> >
> > Julie... Ying is now registered. Please proceed :)
> >
> > Thanks for bearing with us Ying!
> >
> > John
> >
> > On Tue, Nov 14, 2017 at 1:31 PM, Ying Lin via RT
<met_help at ucar.edu>
> wrote:
> >
> >> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
> >>
> >> Hi John,
> >>
> >> I did fill out all those fields. After hitting submit the
three
> >> fields listed in my original email become blank again (showing
> >> 'Select'). If I refill/re-select these three fields and hit
'submit',
> >> the same thing happens - see the attached two screen-shots taken
before
> >> and after 'submit'. I just tried again, twice, same result. I
do know
> >> what the "All Fields Below Are Required. Please Try Again."looks
like
> >> (tried that several times too) but this is not the case here.
After
> >> filling out all the fields and hit 'submit', is it supposed to go
to
> >> another page? I tried this multiple times this morning on both
Firefox
> >> and Chrome, always the same thing. Any ideas on how to proceed
from
> here?
> >>
> >> Thanks,
> >>
> >> Ying
> >>
> >> On 11/14/2017 03:15 PM, John Halley Gotway via RT wrote:
> >>> Hi Ying,
> >>>
> >>> I just tested the form and was able to create a new
registration. The
> >> form
> >>> requires that all fields be filled out. If any are left blank,
it
> >> returns
> >>> with an error message:
> >>> All Fields Below Are Required. Please Try Again.
> >>>
> >>> Please try again, being sure to fill out all the fields.
> >>>
> >>> Thanks!
> >>>
> >>> John
> >>>
> >>> On Tue, Nov 14, 2017 at 9:53 AM, Ying Lin via RT
<met_help at ucar.edu>
> >> wrote:
> >>>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
> >>>>
> >>>> Hi Julie,
> >>>>
> >>>> I thought I registered as a user years ago. Thanks for
providing the
> >>>> registration link. I tried entering registration info several
times,
> >>>> from Firefox (linux) and Chrome (Windows). After entering all
the
> >>>> registration info and hitting 'submit' button, the form comes
back
> with
> >>>> three entries, Affiliation Type, Country where you work,
Country of
> >>>> citizenship reverted back to 'Select'. Is that registration
link
> >> working?
> >>>> Ying
> >>>>
> >>>> On 11/14/2017 11:01 AM, Julie Prestopnik via RT wrote:
> >>>>> Hi Ying
> >>>>>
> >>>>> I would be happy to help you. However, before I'm able to
provide
> you
> >>>> with
> >>>>> direct assistance, you'll need to fill out the free
registration form
> >> on
> >>>>> the MET website. Go to:
> >>>>>
> >>>>> http://www.dtcenter.org/met/users/downloads/index.php
> >>>>>
> >>>>> Enter your email address and hit enter to be taken to the
> registration
> >>>>> page. We require that all users register before receiving
direct
> >>>>> assistance so as to ensure that we remain in compliance with
the
> >>>>> international export laws of the United States.
> >>>>>
> >>>>> Please let me know when you've registered, and I can help you
with
> >> this.
> >>>>> Thanks,
> >>>>> Julie
> >>>>>
> >>>>> On Mon, Nov 13, 2017 at 2:12 PM, Ying Lin via RT
<met_help at ucar.edu>
> >>>> wrote:
> >>>>>> Mon Nov 13 14:12:09 2017: Request 83004 was acted upon.
> >>>>>> Transaction: Ticket created by ying.lin at noaa.gov
> >>>>>> Queue: met_help
> >>>>>> Subject: gen_vx_mask question; running on Theia
> >>>>>> Owner: Nobody
> >>>>>> Requestors: ying.lin at noaa.gov
> >>>>>> Status: new
> >>>>>> Ticket <URL: https://rt.rap.ucar.edu/rt/
> >> Ticket/Display.html?id=83004
> >>>>>> Hello. In re running gen_vx_mask (last Monday's MET+ telecon
at EMC
> >>>>>> notes:
> >>>>>> https://docs.google.com/document/d/1VskN4QM1_NY2oJm5xa9H-
> >>>>>> l8gLo_q4YsXmYzH7z_cOig/edit):
> >>>>>> when I tested it last week on Tide I got this:
> >>>>>>
> >>>>>> ST3mask=stage3_mask_ctrdef.grb
> >>>>>> + gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
> >>>>>> mask_conus.nc -type data -mask_field
name='"var255";level="Z0"'
> >> -thresh
> >>>>>> ge150 -name CNSRFCS
> >>>>>> DEBUG 1: Input File: stage3_mask_ctrdef.grb
> >>>>>> DEBUG 1: Mask File: stage3_mask_ctrdef.grb
> >>>>>> DEBUG 2: Parsed Data Grid: Polar Stereographic (1121 x
881)
> >>>>>> ERROR :
> >>>>>> ERROR : yyerror() -> syntax error in file
> "/tmp/config_28060_0_.temp"
> >>>>>> ERROR :
> >>>>>> ERROR : line = 2
> >>>>>> ERROR :
> >>>>>> ERROR : column = 1
> >>>>>> ERROR :
> >>>>>> ERROR : text = "(nul)"
> >>>>>> ERROR :
> >>>>>> ERROR :
> >>>>>> ERROR : (nul)
> >>>>>> ERROR : (nul)
> >>>>>> ERROR :
> >>>>>>
> >>>>>> ---------------------------
> >>>>>>
> >>>>>> Here's what's in stage3_mask_ctrdef.grb:
> >>>>>>
> >>>>>> wgrib -V stage3_mask_ctrdef.grb
> >>>>>> rec 1:0:date 2017110319 <(201)%20711-0319> var255 kpds5=255
kpds6=1
> >>>>>> kpds7=0 levels=(0,0)
> >>>>>> grid=255 sfc 0-1hr acc:
> >>>>>> var255=undefined
> >>>>>> timerange 4 P1 0 P2 1 TimeU 1 nx 1121 ny 881 GDS grid
5
> >> num_in_ave
> >>>> 0
> >>>>>> missing 0
> >>>>>> center 7 subcenter 4 process 155 Table 2 scan: WE:SN
> winds(grid)
> >>>>>> polar stereo: Lat1 23.117000 Long1 -119.023000 Orient
> -105.000000
> >>>>>> north pole (1121 x 881) Dx 4763 Dy 4763 scan 64 mode
8
> >>>>>> min/max data 0 162 num bits 8 BDS_Ref 0 DecScale 0
> BinScale 0
> >>>>>> ----------------------------
> >>>>>>
> >>>>>> Thinking that it would be easier to ask the question if I run
it on
> >>>>>> Theia, I copied the setup to Theia, in
> >>>>>> /scratch4/NCEPDEV/meso/save/Ying.Lin/met/vx_mask. When I run
> >>>>>> 'test_makemask.csh' in that directory, I get
> >>>>>>
> >>>>>> gen_vx_mask: error while loading shared libraries:
libnetcdf.so.6:
> >>>>>> cannot open shared object file: No such file or directory
> >>>>>>
> >>>>>> I have this in my .cshrc on Theia, following
> >>>>>> https://dtcenter.org/met/users/support/online_tutorial/
> >> ncwcp_201704.php
> >>>>>> module use /scratch4/BMC/dtc/MET/modulefiles
> >>>>>> module load netcdf ncview wgrib R met/6.0
> >>>>>>
> >>>>>> -------------------------------------------------------------
> >>>>>>
> >>>>>> So two questions:
> >>>>>>
> >>>>>> 1) Should I set up my .cshrc differently on Theia?
> >>>>>>
> >>>>>> 2) What am I doing wrong with the gen_vx_mask example?
> >>>>>>
> >>>>>> Thanks very much,
> >>>>>>
> >>>>>> Ying
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>> --
> >>>>>> Ying Lin
> >>>>>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
> >>>>>> NCWCP Cubicle No. 2015
> >>>>>> Ying.Lin at noaa.gov
> >>>>>>
> >>>>>>
> >>>>>>
> >>>>>>
> >>>> --
> >>>> Ying Lin
> >>>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
> >>>> NCWCP Cubicle No. 2015
> >>>> Ying.Lin at noaa.gov
> >>>>
> >>>>
> >>>>
> >>>>
> >> --
> >> Ying Lin
> >> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
> >> NCWCP Cubicle No. 2015
> >> Ying.Lin at noaa.gov
> >>
> >>
> >>
> >>
>
> --
> Ying Lin
> NCEP/EMC/Verification, Post-processing and Product Generation Branch
> NCWCP Cubicle No. 2015
> Ying.Lin at noaa.gov
>
>
>
>
------------------------------------------------
Subject: gen_vx_mask question; running on Theia
From: Julie Prestopnik
Time: Tue Nov 14 14:23:53 2017
Hi Ying. I'm glad the problem with the registration is worked out
now.
John, thanks for figuring that out!
Regarding your problem on tide, it appears that a single quote is
misplaced
in your call. For example, I see you have:
gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
mask_conus.nc
-type data -mask_field name='"var255";level="Z0"' -thresh ge150 -name
CNSRFCS
but the single tick after equals before the quote in
name='"var
needs to be moved. And there should be a semicolon after the end
quote in
"Z0"'.
So, it should read:
gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
mask_conus.nc
-type data -mask_field 'name="var255";level="Z0";' -thresh ge150 -name
CNSRFCS
Regarding your trouble on theia, it is likely a problem with
conflicting
modules. I was able to get a successful run on theia after running
the
following and after modifying your test_makemask.csh file.
Please try running the following:
module purge
module use /scratch4/BMC/dtc/MET/modulefiles
module load intel netcdf ncview wgrib R met/6.0
and then try it again after making the changes noted above with the
problem
on tide. I used this file:
/scratch4/BMC/dtc/Julie.Prestopnik/ying_lin_20171114/test_makemask.csh
and got a successful run of gen_vx_mask.
If that doesn't work, please let me know. Running "module purge"
isn't an
ideal solution, but we have not yet been able to resolve some of the
conflicting module problems at this time.
I hope this helps. Please let us know how it goes.
Thanks,
Julie
On Tue, Nov 14, 2017 at 1:58 PM, John Halley Gotway via RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
>
> Ying,
>
> Tatiana added logic in METViewer to allow for single and double
quotes
> within strings. So that *should* work fine now. I created a ticket
to
> track down the PHP problem at some point. I took a quick look but
the
> problem isn't immediately obvious.
>
> Thanks,
> John
>
> On Tue, Nov 14, 2017 at 1:56 PM, Ying Lin via RT <met_help at ucar.edu>
> wrote:
>
> >
> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
> >
> > John, thanks for figuring this out quickly! I remember a long
time ago
> > that a quote (maybe it was a double quote for 'inches') that
caused a
> > problem with MetViewer title. Will try to remember to avoid
quotes in
> > both PHP and R-related applications.
> > Ying
> >
> > On 11/14/2017 03:49 PM, John Halley Gotway via RT wrote:
> > > Ying,
> > >
> > > OK, I figured it out. It was the *** int'l *** in the "Intended
MET
> > > Software Use" box. Having the single tick in that string messed
up the
> > PHP
> > > code.
> > >
> > > Thanks for letting us know about this! After removing the
single
> quote,
> > I
> > > was able to get the registration to stick.
> > >
> > > Julie... Ying is now registered. Please proceed :)
> > >
> > > Thanks for bearing with us Ying!
> > >
> > > John
> > >
> > > On Tue, Nov 14, 2017 at 1:31 PM, Ying Lin via RT
<met_help at ucar.edu>
> > wrote:
> > >
> > >> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
> > >>
> > >> Hi John,
> > >>
> > >> I did fill out all those fields. After hitting submit
the three
> > >> fields listed in my original email become blank again (showing
> > >> 'Select'). If I refill/re-select these three fields and hit
'submit',
> > >> the same thing happens - see the attached two screen-shots
taken
> before
> > >> and after 'submit'. I just tried again, twice, same result. I
do
> know
> > >> what the "All Fields Below Are Required. Please Try
Again."looks like
> > >> (tried that several times too) but this is not the case here.
After
> > >> filling out all the fields and hit 'submit', is it supposed to
go to
> > >> another page? I tried this multiple times this morning on both
> Firefox
> > >> and Chrome, always the same thing. Any ideas on how to proceed
from
> > here?
> > >>
> > >> Thanks,
> > >>
> > >> Ying
> > >>
> > >> On 11/14/2017 03:15 PM, John Halley Gotway via RT wrote:
> > >>> Hi Ying,
> > >>>
> > >>> I just tested the form and was able to create a new
registration.
> The
> > >> form
> > >>> requires that all fields be filled out. If any are left
blank, it
> > >> returns
> > >>> with an error message:
> > >>> All Fields Below Are Required. Please Try Again.
> > >>>
> > >>> Please try again, being sure to fill out all the fields.
> > >>>
> > >>> Thanks!
> > >>>
> > >>> John
> > >>>
> > >>> On Tue, Nov 14, 2017 at 9:53 AM, Ying Lin via RT
<met_help at ucar.edu>
> > >> wrote:
> > >>>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004
>
> > >>>>
> > >>>> Hi Julie,
> > >>>>
> > >>>> I thought I registered as a user years ago. Thanks for
providing
> the
> > >>>> registration link. I tried entering registration info
several
> times,
> > >>>> from Firefox (linux) and Chrome (Windows). After entering
all the
> > >>>> registration info and hitting 'submit' button, the form comes
back
> > with
> > >>>> three entries, Affiliation Type, Country where you work,
Country of
> > >>>> citizenship reverted back to 'Select'. Is that registration
link
> > >> working?
> > >>>> Ying
> > >>>>
> > >>>> On 11/14/2017 11:01 AM, Julie Prestopnik via RT wrote:
> > >>>>> Hi Ying
> > >>>>>
> > >>>>> I would be happy to help you. However, before I'm able to
provide
> > you
> > >>>> with
> > >>>>> direct assistance, you'll need to fill out the free
registration
> form
> > >> on
> > >>>>> the MET website. Go to:
> > >>>>>
> > >>>>> http://www.dtcenter.org/met/users/downloads/index.php
> > >>>>>
> > >>>>> Enter your email address and hit enter to be taken to the
> > registration
> > >>>>> page. We require that all users register before receiving
direct
> > >>>>> assistance so as to ensure that we remain in compliance with
the
> > >>>>> international export laws of the United States.
> > >>>>>
> > >>>>> Please let me know when you've registered, and I can help
you with
> > >> this.
> > >>>>> Thanks,
> > >>>>> Julie
> > >>>>>
> > >>>>> On Mon, Nov 13, 2017 at 2:12 PM, Ying Lin via RT <
> met_help at ucar.edu>
> > >>>> wrote:
> > >>>>>> Mon Nov 13 14:12:09 2017: Request 83004 was acted upon.
> > >>>>>> Transaction: Ticket created by ying.lin at noaa.gov
> > >>>>>> Queue: met_help
> > >>>>>> Subject: gen_vx_mask question; running on Theia
> > >>>>>> Owner: Nobody
> > >>>>>> Requestors: ying.lin at noaa.gov
> > >>>>>> Status: new
> > >>>>>> Ticket <URL: https://rt.rap.ucar.edu/rt/
> > >> Ticket/Display.html?id=83004
> > >>>>>> Hello. In re running gen_vx_mask (last Monday's MET+
telecon at
> EMC
> > >>>>>> notes:
> > >>>>>> https://docs.google.com/document/d/1VskN4QM1_NY2oJm5xa9H-
> > >>>>>> l8gLo_q4YsXmYzH7z_cOig/edit):
> > >>>>>> when I tested it last week on Tide I got this:
> > >>>>>>
> > >>>>>> ST3mask=stage3_mask_ctrdef.grb
> > >>>>>> + gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
> > >>>>>> mask_conus.nc -type data -mask_field
name='"var255";level="Z0"'
> > >> -thresh
> > >>>>>> ge150 -name CNSRFCS
> > >>>>>> DEBUG 1: Input File: stage3_mask_ctrdef.grb
> > >>>>>> DEBUG 1: Mask File: stage3_mask_ctrdef.grb
> > >>>>>> DEBUG 2: Parsed Data Grid: Polar Stereographic (1121 x
881)
> > >>>>>> ERROR :
> > >>>>>> ERROR : yyerror() -> syntax error in file
> > "/tmp/config_28060_0_.temp"
> > >>>>>> ERROR :
> > >>>>>> ERROR : line = 2
> > >>>>>> ERROR :
> > >>>>>> ERROR : column = 1
> > >>>>>> ERROR :
> > >>>>>> ERROR : text = "(nul)"
> > >>>>>> ERROR :
> > >>>>>> ERROR :
> > >>>>>> ERROR : (nul)
> > >>>>>> ERROR : (nul)
> > >>>>>> ERROR :
> > >>>>>>
> > >>>>>> ---------------------------
> > >>>>>>
> > >>>>>> Here's what's in stage3_mask_ctrdef.grb:
> > >>>>>>
> > >>>>>> wgrib -V stage3_mask_ctrdef.grb
> > >>>>>> rec 1:0:date 2017110319 <(201)%20711-0319> <(201)%20711-
0319>
> var255 kpds5=255 kpds6=1
> > >>>>>> kpds7=0 levels=(0,0)
> > >>>>>> grid=255 sfc 0-1hr acc:
> > >>>>>> var255=undefined
> > >>>>>> timerange 4 P1 0 P2 1 TimeU 1 nx 1121 ny 881 GDS
grid 5
> > >> num_in_ave
> > >>>> 0
> > >>>>>> missing 0
> > >>>>>> center 7 subcenter 4 process 155 Table 2 scan: WE:SN
> > winds(grid)
> > >>>>>> polar stereo: Lat1 23.117000 Long1 -119.023000 Orient
> > -105.000000
> > >>>>>> north pole (1121 x 881) Dx 4763 Dy 4763 scan 64
mode 8
> > >>>>>> min/max data 0 162 num bits 8 BDS_Ref 0 DecScale 0
> > BinScale 0
> > >>>>>> ----------------------------
> > >>>>>>
> > >>>>>> Thinking that it would be easier to ask the question if I
run it
> on
> > >>>>>> Theia, I copied the setup to Theia, in
> > >>>>>> /scratch4/NCEPDEV/meso/save/Ying.Lin/met/vx_mask. When I
run
> > >>>>>> 'test_makemask.csh' in that directory, I get
> > >>>>>>
> > >>>>>> gen_vx_mask: error while loading shared libraries:
libnetcdf.so.6:
> > >>>>>> cannot open shared object file: No such file or directory
> > >>>>>>
> > >>>>>> I have this in my .cshrc on Theia, following
> > >>>>>> https://dtcenter.org/met/users/support/online_tutorial/
> > >> ncwcp_201704.php
> > >>>>>> module use /scratch4/BMC/dtc/MET/modulefiles
> > >>>>>> module load netcdf ncview wgrib R met/6.0
> > >>>>>>
> > >>>>>>
-------------------------------------------------------------
> > >>>>>>
> > >>>>>> So two questions:
> > >>>>>>
> > >>>>>> 1) Should I set up my .cshrc differently on Theia?
> > >>>>>>
> > >>>>>> 2) What am I doing wrong with the gen_vx_mask example?
> > >>>>>>
> > >>>>>> Thanks very much,
> > >>>>>>
> > >>>>>> Ying
> > >>>>>>
> > >>>>>>
> > >>>>>>
> > >>>>>> --
> > >>>>>> Ying Lin
> > >>>>>> NCEP/EMC/Verification, Post-processing and Product
Generation
> Branch
> > >>>>>> NCWCP Cubicle No. 2015
> > >>>>>> Ying.Lin at noaa.gov
> > >>>>>>
> > >>>>>>
> > >>>>>>
> > >>>>>>
> > >>>> --
> > >>>> Ying Lin
> > >>>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
> > >>>> NCWCP Cubicle No. 2015
> > >>>> Ying.Lin at noaa.gov
> > >>>>
> > >>>>
> > >>>>
> > >>>>
> > >> --
> > >> Ying Lin
> > >> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
> > >> NCWCP Cubicle No. 2015
> > >> Ying.Lin at noaa.gov
> > >>
> > >>
> > >>
> > >>
> >
> > --
> > Ying Lin
> > NCEP/EMC/Verification, Post-processing and Product Generation
Branch
> > NCWCP Cubicle No. 2015
> > Ying.Lin at noaa.gov
> >
> >
> >
> >
>
>
------------------------------------------------
Subject: Re: [rt.rap.ucar.edu #83004] gen_vx_mask question; running on Theia
From: Ying Lin
Time: Tue Nov 14 17:30:32 2017
Thanks very much, Julie for resolving both of my questions in one go
(and thanks John!).
Yes, following your directions, I got the mask-making to work on both
wcoss and theia.
In my scripts I actually had the single quote in front of the first
"name" (w/o the double quote) rather than the "var255" (transcription
error when copying the line to email and deleting some unnatural line
break). After adding the semi-colon after the "Z0" it worked.
This is great. I don't mind at all adding the "module purge" to get
it
to work on theia.
Thanks again,
Ying
On 11/14/2017 04:23 PM, Julie Prestopnik via RT wrote:
> Hi Ying. I'm glad the problem with the registration is worked out
now.
> John, thanks for figuring that out!
>
> Regarding your problem on tide, it appears that a single quote is
misplaced
> in your call. For example, I see you have:
>
> gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
mask_conus.nc
> -type data -mask_field name='"var255";level="Z0"' -thresh ge150
-name
> CNSRFCS
>
> but the single tick after equals before the quote in
>
> name='"var
>
> needs to be moved. And there should be a semicolon after the end
quote in
> "Z0"'.
>
> So, it should read:
>
> gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
mask_conus.nc
> -type data -mask_field 'name="var255";level="Z0";' -thresh ge150
-name
> CNSRFCS
>
> Regarding your trouble on theia, it is likely a problem with
conflicting
> modules. I was able to get a successful run on theia after running
the
> following and after modifying your test_makemask.csh file.
>
> Please try running the following:
>
> module purge
> module use /scratch4/BMC/dtc/MET/modulefiles
> module load intel netcdf ncview wgrib R met/6.0
>
> and then try it again after making the changes noted above with the
problem
> on tide. I used this file:
>
/scratch4/BMC/dtc/Julie.Prestopnik/ying_lin_20171114/test_makemask.csh
> and got a successful run of gen_vx_mask.
>
> If that doesn't work, please let me know. Running "module purge"
isn't an
> ideal solution, but we have not yet been able to resolve some of the
> conflicting module problems at this time.
>
> I hope this helps. Please let us know how it goes.
>
> Thanks,
> Julie
>
>
>
>
>
> On Tue, Nov 14, 2017 at 1:58 PM, John Halley Gotway via RT <
> met_help at ucar.edu> wrote:
>
>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
>>
>> Ying,
>>
>> Tatiana added logic in METViewer to allow for single and double
quotes
>> within strings. So that *should* work fine now. I created a
ticket to
>> track down the PHP problem at some point. I took a quick look but
the
>> problem isn't immediately obvious.
>>
>> Thanks,
>> John
>>
>> On Tue, Nov 14, 2017 at 1:56 PM, Ying Lin via RT
<met_help at ucar.edu>
>> wrote:
>>
>>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
>>>
>>> John, thanks for figuring this out quickly! I remember a long
time ago
>>> that a quote (maybe it was a double quote for 'inches') that
caused a
>>> problem with MetViewer title. Will try to remember to avoid
quotes in
>>> both PHP and R-related applications.
>>> Ying
>>>
>>> On 11/14/2017 03:49 PM, John Halley Gotway via RT wrote:
>>>> Ying,
>>>>
>>>> OK, I figured it out. It was the *** int'l *** in the "Intended
MET
>>>> Software Use" box. Having the single tick in that string messed
up the
>>> PHP
>>>> code.
>>>>
>>>> Thanks for letting us know about this! After removing the single
>> quote,
>>> I
>>>> was able to get the registration to stick.
>>>>
>>>> Julie... Ying is now registered. Please proceed :)
>>>>
>>>> Thanks for bearing with us Ying!
>>>>
>>>> John
>>>>
>>>> On Tue, Nov 14, 2017 at 1:31 PM, Ying Lin via RT
<met_help at ucar.edu>
>>> wrote:
>>>>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
>>>>>
>>>>> Hi John,
>>>>>
>>>>> I did fill out all those fields. After hitting submit
the three
>>>>> fields listed in my original email become blank again (showing
>>>>> 'Select'). If I refill/re-select these three fields and hit
'submit',
>>>>> the same thing happens - see the attached two screen-shots taken
>> before
>>>>> and after 'submit'. I just tried again, twice, same result. I
do
>> know
>>>>> what the "All Fields Below Are Required. Please Try Again."looks
like
>>>>> (tried that several times too) but this is not the case here.
After
>>>>> filling out all the fields and hit 'submit', is it supposed to
go to
>>>>> another page? I tried this multiple times this morning on both
>> Firefox
>>>>> and Chrome, always the same thing. Any ideas on how to proceed
from
>>> here?
>>>>> Thanks,
>>>>>
>>>>> Ying
>>>>>
>>>>> On 11/14/2017 03:15 PM, John Halley Gotway via RT wrote:
>>>>>> Hi Ying,
>>>>>>
>>>>>> I just tested the form and was able to create a new
registration.
>> The
>>>>> form
>>>>>> requires that all fields be filled out. If any are left blank,
it
>>>>> returns
>>>>>> with an error message:
>>>>>> All Fields Below Are Required. Please Try Again.
>>>>>>
>>>>>> Please try again, being sure to fill out all the fields.
>>>>>>
>>>>>> Thanks!
>>>>>>
>>>>>> John
>>>>>>
>>>>>> On Tue, Nov 14, 2017 at 9:53 AM, Ying Lin via RT
<met_help at ucar.edu>
>>>>> wrote:
>>>>>>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004
>
>>>>>>>
>>>>>>> Hi Julie,
>>>>>>>
>>>>>>> I thought I registered as a user years ago. Thanks for
providing
>> the
>>>>>>> registration link. I tried entering registration info several
>> times,
>>>>>>> from Firefox (linux) and Chrome (Windows). After entering all
the
>>>>>>> registration info and hitting 'submit' button, the form comes
back
>>> with
>>>>>>> three entries, Affiliation Type, Country where you work,
Country of
>>>>>>> citizenship reverted back to 'Select'. Is that registration
link
>>>>> working?
>>>>>>> Ying
>>>>>>>
>>>>>>> On 11/14/2017 11:01 AM, Julie Prestopnik via RT wrote:
>>>>>>>> Hi Ying
>>>>>>>>
>>>>>>>> I would be happy to help you. However, before I'm able to
provide
>>> you
>>>>>>> with
>>>>>>>> direct assistance, you'll need to fill out the free
registration
>> form
>>>>> on
>>>>>>>> the MET website. Go to:
>>>>>>>>
>>>>>>>> http://www.dtcenter.org/met/users/downloads/index.php
>>>>>>>>
>>>>>>>> Enter your email address and hit enter to be taken to the
>>> registration
>>>>>>>> page. We require that all users register before receiving
direct
>>>>>>>> assistance so as to ensure that we remain in compliance with
the
>>>>>>>> international export laws of the United States.
>>>>>>>>
>>>>>>>> Please let me know when you've registered, and I can help you
with
>>>>> this.
>>>>>>>> Thanks,
>>>>>>>> Julie
>>>>>>>>
>>>>>>>> On Mon, Nov 13, 2017 at 2:12 PM, Ying Lin via RT <
>> met_help at ucar.edu>
>>>>>>> wrote:
>>>>>>>>> Mon Nov 13 14:12:09 2017: Request 83004 was acted upon.
>>>>>>>>> Transaction: Ticket created by ying.lin at noaa.gov
>>>>>>>>> Queue: met_help
>>>>>>>>> Subject: gen_vx_mask question; running on Theia
>>>>>>>>> Owner: Nobody
>>>>>>>>> Requestors: ying.lin at noaa.gov
>>>>>>>>> Status: new
>>>>>>>>> Ticket <URL: https://rt.rap.ucar.edu/rt/
>>>>> Ticket/Display.html?id=83004
>>>>>>>>> Hello. In re running gen_vx_mask (last Monday's MET+
telecon at
>> EMC
>>>>>>>>> notes:
>>>>>>>>> https://docs.google.com/document/d/1VskN4QM1_NY2oJm5xa9H-
>>>>>>>>> l8gLo_q4YsXmYzH7z_cOig/edit):
>>>>>>>>> when I tested it last week on Tide I got this:
>>>>>>>>>
>>>>>>>>> ST3mask=stage3_mask_ctrdef.grb
>>>>>>>>> + gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
>>>>>>>>> mask_conus.nc -type data -mask_field
name='"var255";level="Z0"'
>>>>> -thresh
>>>>>>>>> ge150 -name CNSRFCS
>>>>>>>>> DEBUG 1: Input File: stage3_mask_ctrdef.grb
>>>>>>>>> DEBUG 1: Mask File: stage3_mask_ctrdef.grb
>>>>>>>>> DEBUG 2: Parsed Data Grid: Polar Stereographic (1121 x
881)
>>>>>>>>> ERROR :
>>>>>>>>> ERROR : yyerror() -> syntax error in file
>>> "/tmp/config_28060_0_.temp"
>>>>>>>>> ERROR :
>>>>>>>>> ERROR : line = 2
>>>>>>>>> ERROR :
>>>>>>>>> ERROR : column = 1
>>>>>>>>> ERROR :
>>>>>>>>> ERROR : text = "(nul)"
>>>>>>>>> ERROR :
>>>>>>>>> ERROR :
>>>>>>>>> ERROR : (nul)
>>>>>>>>> ERROR : (nul)
>>>>>>>>> ERROR :
>>>>>>>>>
>>>>>>>>> ---------------------------
>>>>>>>>>
>>>>>>>>> Here's what's in stage3_mask_ctrdef.grb:
>>>>>>>>>
>>>>>>>>> wgrib -V stage3_mask_ctrdef.grb
>>>>>>>>> rec 1:0:date 2017110319 <(201)%20711-0319> <(201)%20711-
0319>
>> var255 kpds5=255 kpds6=1
>>>>>>>>> kpds7=0 levels=(0,0)
>>>>>>>>> grid=255 sfc 0-1hr acc:
>>>>>>>>> var255=undefined
>>>>>>>>> timerange 4 P1 0 P2 1 TimeU 1 nx 1121 ny 881 GDS
grid 5
>>>>> num_in_ave
>>>>>>> 0
>>>>>>>>> missing 0
>>>>>>>>> center 7 subcenter 4 process 155 Table 2 scan: WE:SN
>>> winds(grid)
>>>>>>>>> polar stereo: Lat1 23.117000 Long1 -119.023000 Orient
>>> -105.000000
>>>>>>>>> north pole (1121 x 881) Dx 4763 Dy 4763 scan 64
mode 8
>>>>>>>>> min/max data 0 162 num bits 8 BDS_Ref 0 DecScale 0
>>> BinScale 0
>>>>>>>>> ----------------------------
>>>>>>>>>
>>>>>>>>> Thinking that it would be easier to ask the question if I
run it
>> on
>>>>>>>>> Theia, I copied the setup to Theia, in
>>>>>>>>> /scratch4/NCEPDEV/meso/save/Ying.Lin/met/vx_mask. When I
run
>>>>>>>>> 'test_makemask.csh' in that directory, I get
>>>>>>>>>
>>>>>>>>> gen_vx_mask: error while loading shared libraries:
libnetcdf.so.6:
>>>>>>>>> cannot open shared object file: No such file or directory
>>>>>>>>>
>>>>>>>>> I have this in my .cshrc on Theia, following
>>>>>>>>> https://dtcenter.org/met/users/support/online_tutorial/
>>>>> ncwcp_201704.php
>>>>>>>>> module use /scratch4/BMC/dtc/MET/modulefiles
>>>>>>>>> module load netcdf ncview wgrib R met/6.0
>>>>>>>>>
>>>>>>>>>
-------------------------------------------------------------
>>>>>>>>>
>>>>>>>>> So two questions:
>>>>>>>>>
>>>>>>>>> 1) Should I set up my .cshrc differently on Theia?
>>>>>>>>>
>>>>>>>>> 2) What am I doing wrong with the gen_vx_mask example?
>>>>>>>>>
>>>>>>>>> Thanks very much,
>>>>>>>>>
>>>>>>>>> Ying
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>> --
>>>>>>>>> Ying Lin
>>>>>>>>> NCEP/EMC/Verification, Post-processing and Product
Generation
>> Branch
>>>>>>>>> NCWCP Cubicle No. 2015
>>>>>>>>> Ying.Lin at noaa.gov
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>>>>
>>>>>>> --
>>>>>>> Ying Lin
>>>>>>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
>>>>>>> NCWCP Cubicle No. 2015
>>>>>>> Ying.Lin at noaa.gov
>>>>>>>
>>>>>>>
>>>>>>>
>>>>>>>
>>>>> --
>>>>> Ying Lin
>>>>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
>>>>> NCWCP Cubicle No. 2015
>>>>> Ying.Lin at noaa.gov
>>>>>
>>>>>
>>>>>
>>>>>
>>> --
>>> Ying Lin
>>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
>>> NCWCP Cubicle No. 2015
>>> Ying.Lin at noaa.gov
>>>
>>>
>>>
>>>
>>
--
Ying Lin
NCEP/EMC/Verification, Post-processing and Product Generation Branch
NCWCP Cubicle No. 2015
Ying.Lin at noaa.gov
------------------------------------------------
Subject: gen_vx_mask question; running on Theia
From: Julie Prestopnik
Time: Wed Nov 15 09:08:09 2017
Hi Ying. Thank you for letting us know that everything seems to be
working
well now! I'll go ahead and close this ticket.
Please let us know if you encounter any other difficulties.
Julie
On Tue, Nov 14, 2017 at 5:30 PM, Ying Lin via RT <met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
>
> Thanks very much, Julie for resolving both of my questions in one go
> (and thanks John!).
>
> Yes, following your directions, I got the mask-making to work on
both
> wcoss and theia.
>
> In my scripts I actually had the single quote in front of the first
> "name" (w/o the double quote) rather than the "var255"
(transcription
> error when copying the line to email and deleting some unnatural
line
> break). After adding the semi-colon after the "Z0" it worked.
>
> This is great. I don't mind at all adding the "module purge" to
get it
> to work on theia.
>
> Thanks again,
>
> Ying
>
> On 11/14/2017 04:23 PM, Julie Prestopnik via RT wrote:
> > Hi Ying. I'm glad the problem with the registration is worked out
now.
> > John, thanks for figuring that out!
> >
> > Regarding your problem on tide, it appears that a single quote is
> misplaced
> > in your call. For example, I see you have:
> >
> > gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
mask_conus.nc
> > -type data -mask_field name='"var255";level="Z0"' -thresh ge150
-name
> > CNSRFCS
> >
> > but the single tick after equals before the quote in
> >
> > name='"var
> >
> > needs to be moved. And there should be a semicolon after the end
quote
> in
> > "Z0"'.
> >
> > So, it should read:
> >
> > gen_vx_mask stage3_mask_ctrdef.grb stage3_mask_ctrdef.grb
mask_conus.nc
> > -type data -mask_field 'name="var255";level="Z0";' -thresh ge150
-name
> > CNSRFCS
> >
> > Regarding your trouble on theia, it is likely a problem with
conflicting
> > modules. I was able to get a successful run on theia after
running the
> > following and after modifying your test_makemask.csh file.
> >
> > Please try running the following:
> >
> > module purge
> > module use /scratch4/BMC/dtc/MET/modulefiles
> > module load intel netcdf ncview wgrib R met/6.0
> >
> > and then try it again after making the changes noted above with
the
> problem
> > on tide. I used this file:
> >
/scratch4/BMC/dtc/Julie.Prestopnik/ying_lin_20171114/test_makemask.csh
> > and got a successful run of gen_vx_mask.
> >
> > If that doesn't work, please let me know. Running "module purge"
isn't
> an
> > ideal solution, but we have not yet been able to resolve some of
the
> > conflicting module problems at this time.
> >
> > I hope this helps. Please let us know how it goes.
> >
> > Thanks,
> > Julie
> >
> >
> >
> >
> >
> > On Tue, Nov 14, 2017 at 1:58 PM, John Halley Gotway via RT <
> > met_help at ucar.edu> wrote:
> >
> >> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
> >>
> >> Ying,
> >>
> >> Tatiana added logic in METViewer to allow for single and double
quotes
> >> within strings. So that *should* work fine now. I created a
ticket to
> >> track down the PHP problem at some point. I took a quick look
but the
> >> problem isn't immediately obvious.
> >>
> >> Thanks,
> >> John
> >>
> >> On Tue, Nov 14, 2017 at 1:56 PM, Ying Lin via RT
<met_help at ucar.edu>
> >> wrote:
> >>
> >>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
> >>>
> >>> John, thanks for figuring this out quickly! I remember a long
time ago
> >>> that a quote (maybe it was a double quote for 'inches') that
caused a
> >>> problem with MetViewer title. Will try to remember to avoid
quotes in
> >>> both PHP and R-related applications.
> >>> Ying
> >>>
> >>> On 11/14/2017 03:49 PM, John Halley Gotway via RT wrote:
> >>>> Ying,
> >>>>
> >>>> OK, I figured it out. It was the *** int'l *** in the
"Intended MET
> >>>> Software Use" box. Having the single tick in that string
messed up
> the
> >>> PHP
> >>>> code.
> >>>>
> >>>> Thanks for letting us know about this! After removing the
single
> >> quote,
> >>> I
> >>>> was able to get the registration to stick.
> >>>>
> >>>> Julie... Ying is now registered. Please proceed :)
> >>>>
> >>>> Thanks for bearing with us Ying!
> >>>>
> >>>> John
> >>>>
> >>>> On Tue, Nov 14, 2017 at 1:31 PM, Ying Lin via RT
<met_help at ucar.edu>
> >>> wrote:
> >>>>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004
>
> >>>>>
> >>>>> Hi John,
> >>>>>
> >>>>> I did fill out all those fields. After hitting submit
the
> three
> >>>>> fields listed in my original email become blank again (showing
> >>>>> 'Select'). If I refill/re-select these three fields and hit
> 'submit',
> >>>>> the same thing happens - see the attached two screen-shots
taken
> >> before
> >>>>> and after 'submit'. I just tried again, twice, same result.
I do
> >> know
> >>>>> what the "All Fields Below Are Required. Please Try
Again."looks like
> >>>>> (tried that several times too) but this is not the case here.
After
> >>>>> filling out all the fields and hit 'submit', is it supposed to
go to
> >>>>> another page? I tried this multiple times this morning on
both
> >> Firefox
> >>>>> and Chrome, always the same thing. Any ideas on how to
proceed from
> >>> here?
> >>>>> Thanks,
> >>>>>
> >>>>> Ying
> >>>>>
> >>>>> On 11/14/2017 03:15 PM, John Halley Gotway via RT wrote:
> >>>>>> Hi Ying,
> >>>>>>
> >>>>>> I just tested the form and was able to create a new
registration.
> >> The
> >>>>> form
> >>>>>> requires that all fields be filled out. If any are left
blank, it
> >>>>> returns
> >>>>>> with an error message:
> >>>>>> All Fields Below Are Required. Please Try Again.
> >>>>>>
> >>>>>> Please try again, being sure to fill out all the fields.
> >>>>>>
> >>>>>> Thanks!
> >>>>>>
> >>>>>> John
> >>>>>>
> >>>>>> On Tue, Nov 14, 2017 at 9:53 AM, Ying Lin via RT
<met_help at ucar.edu
> >
> >>>>> wrote:
> >>>>>>> <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83004 >
> >>>>>>>
> >>>>>>> Hi Julie,
> >>>>>>>
> >>>>>>> I thought I registered as a user years ago. Thanks for
providing
> >> the
> >>>>>>> registration link. I tried entering registration info
several
> >> times,
> >>>>>>> from Firefox (linux) and Chrome (Windows). After entering
all the
> >>>>>>> registration info and hitting 'submit' button, the form
comes back
> >>> with
> >>>>>>> three entries, Affiliation Type, Country where you work,
Country of
> >>>>>>> citizenship reverted back to 'Select'. Is that registration
link
> >>>>> working?
> >>>>>>> Ying
> >>>>>>>
> >>>>>>> On 11/14/2017 11:01 AM, Julie Prestopnik via RT wrote:
> >>>>>>>> Hi Ying
> >>>>>>>>
> >>>>>>>> I would be happy to help you. However, before I'm able to
provide
> >>> you
> >>>>>>> with
> >>>>>>>> direct assistance, you'll need to fill out the free
registration
> >> form
> >>>>> on
> >>>>>>>> the MET website. Go to:
> >>>>>>>>
> >>>>>>>>
http://www.dtcenter.org/met/users/downloads/index.php
> >>>>>>>>
> >>>>>>>> Enter your email address and hit enter to be taken to the
> >>> registration
> >>>>>>>> page. We require that all users register before receiving
direct
> >>>>>>>> assistance so as to ensure that we remain in compliance
with the
> >>>>>>>> international export laws of the United States.
> >>>>>>>>
> >>>>>>>> Please let me know when you've registered, and I can help
you with
> >>>>> this.
> >>>>>>>> Thanks,
> >>>>>>>> Julie
> >>>>>>>>
> >>>>>>>> On Mon, Nov 13, 2017 at 2:12 PM, Ying Lin via RT <
> >> met_help at ucar.edu>
> >>>>>>> wrote:
> >>>>>>>>> Mon Nov 13 14:12:09 2017: Request 83004 was acted upon.
> >>>>>>>>> Transaction: Ticket created by ying.lin at noaa.gov
> >>>>>>>>> Queue: met_help
> >>>>>>>>> Subject: gen_vx_mask question; running on Theia
> >>>>>>>>> Owner: Nobody
> >>>>>>>>> Requestors: ying.lin at noaa.gov
> >>>>>>>>> Status: new
> >>>>>>>>> Ticket <URL: https://rt.rap.ucar.edu/rt/
> >>>>> Ticket/Display.html?id=83004
> >>>>>>>>> Hello. In re running gen_vx_mask (last Monday's MET+
telecon at
> >> EMC
> >>>>>>>>> notes:
> >>>>>>>>> https://docs.google.com/document/d/1VskN4QM1_NY2oJm5xa9H-
> >>>>>>>>> l8gLo_q4YsXmYzH7z_cOig/edit):
> >>>>>>>>> when I tested it last week on Tide I got this:
> >>>>>>>>>
> >>>>>>>>> ST3mask=stage3_mask_ctrdef.grb
> >>>>>>>>> + gen_vx_mask stage3_mask_ctrdef.grb
stage3_mask_ctrdef.grb
> >>>>>>>>> mask_conus.nc -type data -mask_field
name='"var255";level="Z0"'
> >>>>> -thresh
> >>>>>>>>> ge150 -name CNSRFCS
> >>>>>>>>> DEBUG 1: Input File: stage3_mask_ctrdef.grb
> >>>>>>>>> DEBUG 1: Mask File: stage3_mask_ctrdef.grb
> >>>>>>>>> DEBUG 2: Parsed Data Grid: Polar Stereographic (1121 x
881)
> >>>>>>>>> ERROR :
> >>>>>>>>> ERROR : yyerror() -> syntax error in file
> >>> "/tmp/config_28060_0_.temp"
> >>>>>>>>> ERROR :
> >>>>>>>>> ERROR : line = 2
> >>>>>>>>> ERROR :
> >>>>>>>>> ERROR : column = 1
> >>>>>>>>> ERROR :
> >>>>>>>>> ERROR : text = "(nul)"
> >>>>>>>>> ERROR :
> >>>>>>>>> ERROR :
> >>>>>>>>> ERROR : (nul)
> >>>>>>>>> ERROR : (nul)
> >>>>>>>>> ERROR :
> >>>>>>>>>
> >>>>>>>>> ---------------------------
> >>>>>>>>>
> >>>>>>>>> Here's what's in stage3_mask_ctrdef.grb:
> >>>>>>>>>
> >>>>>>>>> wgrib -V stage3_mask_ctrdef.grb
> >>>>>>>>> rec 1:0:date 2017110319 <(201)%20711-0319> <(201)%20711-
0319>
> >> var255 kpds5=255 kpds6=1
> >>>>>>>>> kpds7=0 levels=(0,0)
> >>>>>>>>> grid=255 sfc 0-1hr acc:
> >>>>>>>>> var255=undefined
> >>>>>>>>> timerange 4 P1 0 P2 1 TimeU 1 nx 1121 ny 881 GDS
grid 5
> >>>>> num_in_ave
> >>>>>>> 0
> >>>>>>>>> missing 0
> >>>>>>>>> center 7 subcenter 4 process 155 Table 2 scan:
WE:SN
> >>> winds(grid)
> >>>>>>>>> polar stereo: Lat1 23.117000 Long1 -119.023000
Orient
> >>> -105.000000
> >>>>>>>>> north pole (1121 x 881) Dx 4763 Dy 4763 scan 64
mode 8
> >>>>>>>>> min/max data 0 162 num bits 8 BDS_Ref 0 DecScale
0
> >>> BinScale 0
> >>>>>>>>> ----------------------------
> >>>>>>>>>
> >>>>>>>>> Thinking that it would be easier to ask the question if I
run it
> >> on
> >>>>>>>>> Theia, I copied the setup to Theia, in
> >>>>>>>>> /scratch4/NCEPDEV/meso/save/Ying.Lin/met/vx_mask. When I
run
> >>>>>>>>> 'test_makemask.csh' in that directory, I get
> >>>>>>>>>
> >>>>>>>>> gen_vx_mask: error while loading shared libraries:
> libnetcdf.so.6:
> >>>>>>>>> cannot open shared object file: No such file or directory
> >>>>>>>>>
> >>>>>>>>> I have this in my .cshrc on Theia, following
> >>>>>>>>> https://dtcenter.org/met/users/support/online_tutorial/
> >>>>> ncwcp_201704.php
> >>>>>>>>> module use /scratch4/BMC/dtc/MET/modulefiles
> >>>>>>>>> module load netcdf ncview wgrib R met/6.0
> >>>>>>>>>
> >>>>>>>>>
-------------------------------------------------------------
> >>>>>>>>>
> >>>>>>>>> So two questions:
> >>>>>>>>>
> >>>>>>>>> 1) Should I set up my .cshrc differently on Theia?
> >>>>>>>>>
> >>>>>>>>> 2) What am I doing wrong with the gen_vx_mask example?
> >>>>>>>>>
> >>>>>>>>> Thanks very much,
> >>>>>>>>>
> >>>>>>>>> Ying
> >>>>>>>>>
> >>>>>>>>>
> >>>>>>>>>
> >>>>>>>>> --
> >>>>>>>>> Ying Lin
> >>>>>>>>> NCEP/EMC/Verification, Post-processing and Product
Generation
> >> Branch
> >>>>>>>>> NCWCP Cubicle No. 2015
> >>>>>>>>> Ying.Lin at noaa.gov
> >>>>>>>>>
> >>>>>>>>>
> >>>>>>>>>
> >>>>>>>>>
> >>>>>>> --
> >>>>>>> Ying Lin
> >>>>>>> NCEP/EMC/Verification, Post-processing and Product
Generation
> Branch
> >>>>>>> NCWCP Cubicle No. 2015
> >>>>>>> Ying.Lin at noaa.gov
> >>>>>>>
> >>>>>>>
> >>>>>>>
> >>>>>>>
> >>>>> --
> >>>>> Ying Lin
> >>>>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
> >>>>> NCWCP Cubicle No. 2015
> >>>>> Ying.Lin at noaa.gov
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>> --
> >>> Ying Lin
> >>> NCEP/EMC/Verification, Post-processing and Product Generation
Branch
> >>> NCWCP Cubicle No. 2015
> >>> Ying.Lin at noaa.gov
> >>>
> >>>
> >>>
> >>>
> >>
>
> --
> Ying Lin
> NCEP/EMC/Verification, Post-processing and Product Generation Branch
> NCWCP Cubicle No. 2015
> Ying.Lin at noaa.gov
>
>
>
>
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