[Met_help] [rt.rap.ucar.edu #79175] History for Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
Julie Prestopnik via RT
met_help at ucar.edu
Wed Jan 18 11:19:17 MST 2017
----------------------------------------------------------------
Initial Request
----------------------------------------------------------------
CLASSIFICATION: UNCLASSIFIED
I followed the instructions in the V5.2 tutorial and downloaded/unpacked
the tarball named "cairo-1.14.6.tar.xz" from site:
https://cairographics.org/releases/
After unpacking I have a configure script, but not a makefile script.
I ran ./configure --prefix=/p/home/jraby/cairo/cairo-1.14.6, but still did
not see a makefile script.
The attached log file documents several errors and a catastrophic failure as
follows:
"conftest.c(52): catastrophic error: cannot open source file
"minix/config.h"
#include <minix/config.h>"
I don't see the sub directory "minix" in the install dir.
Judging from the number and severity of the errors, it seems like I have a
problem with the tarball.
I repeated the above starting with a new download of the same tarball and
the result was the same.
Is it possible I have the wrong tarball? If so, do you have another download
site to acquire this tarball or a recommendation of a more updated version
that's been tested?
Do you have any suggestions on a way to resolve this issue?
Thanks.
R/
John
Mr John W. Raby, Meteorologist
U.S. Army Research Laboratory
White Sands Missile Range, NM 88002
(575) 678-2004 DSN 258-2004
FAX (575) 678-1230 DSN 258-1230
Email: john.w.raby2.civ at mail.mil
CLASSIFICATION: UNCLASSIFIED
----------------------------------------------------------------
Complete Ticket History
----------------------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Julie Prestopnik
Time: Tue Jan 17 13:42:10 2017
Hi John. It looks like you need a newer version of pixman. The log
file
shows the installed pixman version is 0.24.4 and cairo requires 0.30.0
or
later version. We are using version 0.32.6.
The log file complains two issues:
1. missing header files (Makefile was generated with the same errors
that
we have seen)
2. pixman version <== "Requested 'pixman-1 >= 0.30.0' but version of
Pixman
is 0.24.4"
If you want to check your pixman version:
1: Get the library path from the following command (check path for
ldconfig if get "command not found" - may be in /sbin/)
ldconfig -p | grep libpixman
2. Check the version number by getting real file name from above.
For
example,
ls -l /usr/lib64/libpixman*
I hope this helps!
Julie
On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> Transaction: Ticket created by john.w.raby2.civ at mail.mil
> Queue: met_help
> Subject: Problem compiling cairo library for MET V5.2
(UNCLASSIFIED)
> Owner: Nobody
> Requestors: john.w.raby2.civ at mail.mil
> Status: new
> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
>
> CLASSIFICATION: UNCLASSIFIED
>
> I followed the instructions in the V5.2 tutorial and
downloaded/unpacked
> the tarball named "cairo-1.14.6.tar.xz" from site:
> https://cairographics.org/releases/
>
> After unpacking I have a configure script, but not a makefile
script.
>
> I ran ./configure --prefix=/p/home/jraby/cairo/cairo-1.14.6, but
still did
> not see a makefile script.
>
> The attached log file documents several errors and a catastrophic
failure
> as
> follows:
>
> "conftest.c(52): catastrophic error: cannot open source file
> "minix/config.h"
> #include <minix/config.h>"
>
> I don't see the sub directory "minix" in the install dir.
>
> Judging from the number and severity of the errors, it seems like I
have a
> problem with the tarball.
>
> I repeated the above starting with a new download of the same
tarball and
> the result was the same.
>
> Is it possible I have the wrong tarball? If so, do you have another
> download
> site to acquire this tarball or a recommendation of a more updated
version
> that's been tested?
>
> Do you have any suggestions on a way to resolve this issue?
>
> Thanks.
>
> R/
> John
>
> Mr John W. Raby, Meteorologist
> U.S. Army Research Laboratory
> White Sands Missile Range, NM 88002
> (575) 678-2004 DSN 258-2004
> FAX (575) 678-1230 DSN 258-1230
> Email: john.w.raby2.civ at mail.mil
>
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Raby, John W USA CIV
Time: Tue Jan 17 13:58:56 2017
CLASSIFICATION: UNCLASSIFIED
Julie -
I'm running into a brick wall trying to locate pixman on my system.
See the
following responses when attempting to use your suggested command:
excalibur:~jraby
> idconfig -p | grep libpixman
-bash: idconfig: command not found
excalibur:~jraby
> /sbin/idconfig -p | grep libpixman
-bash: /sbin/idconfig: No such file or directory
excalibur:~jraby
> idconfig
If 'idconfig' is not a typo you can run the following command to
lookup the
package that contains the binary:
command-not-found idconfig
-bash: idconfig: command not found
excalibur:~jraby
> command-not-found idconfig
excalibur:~jraby
> which libpixman
which: no libpixman in
(/opt/intel/compilers_and_libraries_2016.0.109/linux/bin/intel64:/opt/intel/compilers_and_libraries_2016.0.109/linux/mpi/intel64/bin:/opt/intel/debugger_2016/gdb/intel64_mic/bin:/opt/cray/hdf5/1.8.13/bin:/opt/cray/netcdf/4.3.2/bin:/opt/cray/mpt/7.1.0/gni/bin:/opt/cray/rca/1.0.0-
2.0502.53711.3.127.ari/bin:/opt/cray/alps/5.2.1-
2.0502.9041.11.6.ari/sbin:/opt/cray/alps/5.2.1-
2.0502.9041.11.6.ari/bin:/opt/cray/dvs/2.5_0.9.0-
1.0502.1873.1.145.ari/bin:/opt/cray/xpmem/0.1-
2.0502.55507.3.2.ari/bin:/opt/cray/dmapp/7.0.1-
1.0502.9501.5.219.ari/bin:/opt/cray/pmi/5.0.8-
1.0000.10843.170.1.ari/bin:/opt/cray/ugni/5.0-
1.0502.9685.4.24.ari/bin:/opt/cray/udreg/2.3.2-
1.0502.9275.1.12.ari/bin:/usr/people/PBS/SLB:/app/unsupported/BC:/usr/krb5/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/default/bin:/opt/pbs/default/bin:/opt/cray/craype/2.4.1/bin:/opt/cray/switch/1.0-
1.0502.60522.1.61.ari/bin:/opt/cray/eslogin/eswrap/1.3.3-
1.020200.1278.0/bin:/opt/modules/3.2.10.3/bin:/usr/local/bin:/usr/bin:/bin:/u
sr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/sbin:/usr/sbin:/usr/lib/qt3/bin:/opt/cray/bin:/usr/brl/bin:/usr/brl/bin:/usr/brl/bin:/opt/cray/netcdf/4.3.2/INTEL/140/bin:/p/home/jraby/Scripts:.)
excalibur:~jraby
Is this something I could download and compile the same way I've been
doing
with the other libraries? If so what is the download site your
recommend for
obtaining the 0.30.0 or later version?
Thanks.
R/
John
-----Original Message-----
From: Julie Prestopnik via RT [mailto:met_help at ucar.edu]
Sent: Tuesday, January 17, 2017 1:42 PM
To: Raby, John W CIV USARMY RDECOM ARL (US)
<john.w.raby2.civ at mail.mil>
Subject: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
compiling cairo
library for MET V5.2 (UNCLASSIFIED)
All active links contained in this email were disabled. Please verify
the
identity of the sender, and confirm the authenticity of all links
contained
within the message prior to copying and pasting the address to a Web
browser.
----
Hi John. It looks like you need a newer version of pixman. The log
file
shows the installed pixman version is 0.24.4 and cairo requires 0.30.0
or
later version. We are using version 0.32.6.
The log file complains two issues:
1. missing header files (Makefile was generated with the same errors
that we
have seen) 2. pixman version <== "Requested 'pixman-1 >= 0.30.0' but
version
of Pixman is 0.24.4"
If you want to check your pixman version:
1: Get the library path from the following command (check path for
ldconfig if get "command not found" - may be in /sbin/)
ldconfig -p | grep libpixman
2. Check the version number by getting real file name from above.
For
example,
ls -l /usr/lib64/libpixman*
I hope this helps!
Julie
On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> Transaction: Ticket created by john.w.raby2.civ at mail.mil
> Queue: met_help
> Subject: Problem compiling cairo library for MET V5.2
(UNCLASSIFIED)
> Owner: Nobody
> Requestors: john.w.raby2.civ at mail.mil
> Status: new
> Ticket <Caution-url:
> Caution-https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
>
> CLASSIFICATION: UNCLASSIFIED
>
> I followed the instructions in the V5.2 tutorial and
> downloaded/unpacked the tarball named "cairo-1.14.6.tar.xz" from
site:
> Caution-https://cairographics.org/releases/
>
> After unpacking I have a configure script, but not a makefile
script.
>
> I ran ./configure --prefix=/p/home/jraby/cairo/cairo-1.14.6, but
still
> did not see a makefile script.
>
> The attached log file documents several errors and a catastrophic
> failure as
> follows:
>
> "conftest.c(52): catastrophic error: cannot open source file
> "minix/config.h"
> #include <minix/config.h>"
>
> I don't see the sub directory "minix" in the install dir.
>
> Judging from the number and severity of the errors, it seems like I
> have a problem with the tarball.
>
> I repeated the above starting with a new download of the same
tarball
> and the result was the same.
>
> Is it possible I have the wrong tarball? If so, do you have another
> download site to acquire this tarball or a recommendation of a more
> updated version that's been tested?
>
> Do you have any suggestions on a way to resolve this issue?
>
> Thanks.
>
> R/
> John
>
> Mr John W. Raby, Meteorologist
> U.S. Army Research Laboratory
> White Sands Missile Range, NM 88002
> (575) 678-2004 DSN 258-2004
> FAX (575) 678-1230 DSN 258-1230
> Email: john.w.raby2.civ at mail.mil
>
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research Research Applications
Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
CLASSIFICATION: UNCLASSIFIED
------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Julie Prestopnik
Time: Tue Jan 17 14:18:45 2017
Hi John.
It looks like you have "idconfig" note the "i" (lower case i), but it
should be "l" (lower case l).
Try copying and pasting this to see if it lives in /sbin:
ls /sbin/ldconfig
I hope that helps!
Julie
On Tue, Jan 17, 2017 at 1:58 PM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
> CLASSIFICATION: UNCLASSIFIED
>
> Julie -
>
> I'm running into a brick wall trying to locate pixman on my system.
See the
> following responses when attempting to use your suggested command:
>
> excalibur:~jraby
> > idconfig -p | grep libpixman
> -bash: idconfig: command not found
> excalibur:~jraby
> > /sbin/idconfig -p | grep libpixman
> -bash: /sbin/idconfig: No such file or directory
> excalibur:~jraby
> > idconfig
> If 'idconfig' is not a typo you can run the following command to
lookup the
> package that contains the binary:
> command-not-found idconfig
> -bash: idconfig: command not found
> excalibur:~jraby
> > command-not-found idconfig
> excalibur:~jraby
> > which libpixman
> which: no libpixman in
> (/opt/intel/compilers_and_libraries_2016.0.109/linux/
> bin/intel64:/opt/intel/compilers_and_libraries_2016.
> 0.109/linux/mpi/intel64/bin:/opt/intel/debugger_2016/gdb/
> intel64_mic/bin:/opt/cray/hdf5/1.8.13/bin:/opt/cray/
> netcdf/4.3.2/bin:/opt/cray/mpt/7.1.0/gni/bin:/opt/cray/
> rca/1.0.0-2.0502.53711.3.127.ari/bin:/opt/cray/alps/5.2.1-
> 2.0502.9041.11.6.ari/sbin:/opt/cray/alps/5.2.1-2.0502.
> 9041.11.6.ari/bin:/opt/cray/dvs/2.5_0.9.0-1.0502.1873.1.
> 145.ari/bin:/opt/cray/xpmem/0.1-2.0502.55507.3.2.ari/bin:/
> opt/cray/dmapp/7.0.1-1.0502.9501.5.219.ari/bin:/opt/cray/
> pmi/5.0.8-1.0000.10843.170.1.ari/bin:/opt/cray/ugni/5.0-1.
> 0502.9685.4.24.ari/bin:/opt/cray/udreg/2.3.2-1.0502.9275.
> 1.12.ari/bin:/usr/people/PBS/SLB:/app/unsupported/BC:/usr/
> krb5/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/
> default/bin:/opt/pbs/default/bin:/opt/cray/craype/2.4.1/
> bin:/opt/cray/switch/1.0-1.0502.60522.1.61.ari/bin:/opt/
> cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/
> 3.2.10.3/bin:/usr/local/bin:/usr/bin:/bin:/u
> sr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/
> bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/sbin:/usr/sbin:/usr/
> lib/qt3/bin:/opt/cray/bin:/usr/brl/bin:/usr/brl/bin:/usr/
>
brl/bin:/opt/cray/netcdf/4.3.2/INTEL/140/bin:/p/home/jraby/Scripts:.)
> excalibur:~jraby
>
> Is this something I could download and compile the same way I've
been doing
> with the other libraries? If so what is the download site your
recommend
> for
> obtaining the 0.30.0 or later version?
>
> Thanks.
>
> R/
> John
>
> -----Original Message-----
> From: Julie Prestopnik via RT [mailto:met_help at ucar.edu]
> Sent: Tuesday, January 17, 2017 1:42 PM
> To: Raby, John W CIV USARMY RDECOM ARL (US)
<john.w.raby2.civ at mail.mil>
> Subject: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
compiling
> cairo
> library for MET V5.2 (UNCLASSIFIED)
>
> All active links contained in this email were disabled. Please
verify the
> identity of the sender, and confirm the authenticity of all links
contained
> within the message prior to copying and pasting the address to a Web
> browser.
>
>
>
>
> ----
>
> Hi John. It looks like you need a newer version of pixman. The log
file
> shows the installed pixman version is 0.24.4 and cairo requires
0.30.0 or
> later version. We are using version 0.32.6.
>
> The log file complains two issues:
> 1. missing header files (Makefile was generated with the same errors
that
> we
> have seen) 2. pixman version <== "Requested 'pixman-1 >= 0.30.0' but
> version
> of Pixman is 0.24.4"
>
> If you want to check your pixman version:
>
> 1: Get the library path from the following command (check path
for
> ldconfig if get "command not found" - may be in /sbin/)
> ldconfig -p | grep libpixman
>
> 2. Check the version number by getting real file name from above.
For
> example,
> ls -l /usr/lib64/libpixman*
>
> I hope this helps!
>
> Julie
>
>
>
>
>
> On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via RT <
> met_help at ucar.edu> wrote:
>
> >
> > Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> > Transaction: Ticket created by john.w.raby2.civ at mail.mil
> > Queue: met_help
> > Subject: Problem compiling cairo library for MET V5.2
(UNCLASSIFIED)
> > Owner: Nobody
> > Requestors: john.w.raby2.civ at mail.mil
> > Status: new
> > Ticket <Caution-url:
> > Caution-https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> > I followed the instructions in the V5.2 tutorial and
> > downloaded/unpacked the tarball named "cairo-1.14.6.tar.xz" from
site:
> > Caution-https://cairographics.org/releases/
> >
> > After unpacking I have a configure script, but not a makefile
script.
> >
> > I ran ./configure --prefix=/p/home/jraby/cairo/cairo-1.14.6, but
still
> > did not see a makefile script.
> >
> > The attached log file documents several errors and a catastrophic
> > failure as
> > follows:
> >
> > "conftest.c(52): catastrophic error: cannot open source file
> > "minix/config.h"
> > #include <minix/config.h>"
> >
> > I don't see the sub directory "minix" in the install dir.
> >
> > Judging from the number and severity of the errors, it seems like
I
> > have a problem with the tarball.
> >
> > I repeated the above starting with a new download of the same
tarball
> > and the result was the same.
> >
> > Is it possible I have the wrong tarball? If so, do you have
another
> > download site to acquire this tarball or a recommendation of a
more
> > updated version that's been tested?
> >
> > Do you have any suggestions on a way to resolve this issue?
> >
> > Thanks.
> >
> > R/
> > John
> >
> > Mr John W. Raby, Meteorologist
> > U.S. Army Research Laboratory
> > White Sands Missile Range, NM 88002
> > (575) 678-2004 DSN 258-2004
> > FAX (575) 678-1230 DSN 258-1230
> > Email: john.w.raby2.civ at mail.mil
> >
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> >
>
>
> --
> Julie Prestopnik
> National Center for Atmospheric Research Research Applications
Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Raby, John W USA CIV
Time: Tue Jan 17 14:34:18 2017
CLASSIFICATION: UNCLASSIFIED
Julie -
You are correct. Thanks for catching it so quickly. See the following:
excalibur:~jraby/cairo
> /sbin/ldconfig -p | grep libpixman
libpixman-1.so.0 (libc6,x86-64) => /usr/lib64/libpixman-1.so.0
libpixman-1.so.0 (libc6) => /usr/lib/libpixman-1.so.0
libpixman-1.so (libc6,x86-64) => /usr/lib64/libpixman-1.so
excalibur:~jraby/cairo
I used the other command (ls -l) to find out the version:
> ls -l /usr/lib64/libpixman-1.so
lrwxrwxrwx 1 root root 21 Apr 7 2015 /usr/lib64/libpixman-1.so ->
libpixman-1.so.0.24.4*
excalibur:~jraby/cairo
> ls -l /usr/lib/libpixman-1.so.0
lrwxrwxrwx 1 root root 21 Jan 29 2015 /usr/lib/libpixman-1.so.0 ->
libpixman-1.so.0.24.4*
excalibur:~jraby/cairo
This confirms what was noted in the log file as you pointed out.
I didn't compile libpixman myself, so it must have been compiled as
part of
the overall system by the administrators.
R/
John
-----Original Message-----
From: Julie Prestopnik via RT [mailto:met_help at ucar.edu]
Sent: Tuesday, January 17, 2017 2:19 PM
To: Raby, John W CIV USARMY RDECOM ARL (US)
<john.w.raby2.civ at mail.mil>
Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
compiling
cairo library for MET V5.2 (UNCLASSIFIED)
All active links contained in this email were disabled. Please verify
the
identity of the sender, and confirm the authenticity of all links
contained
within the message prior to copying and pasting the address to a Web
browser.
----
Hi John.
It looks like you have "idconfig" note the "i" (lower case i), but it
should
be "l" (lower case l).
Try copying and pasting this to see if it lives in /sbin:
ls /sbin/ldconfig
I hope that helps!
Julie
On Tue, Jan 17, 2017 at 1:58 PM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> <Caution-url:
> Caution-https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
> CLASSIFICATION: UNCLASSIFIED
>
> Julie -
>
> I'm running into a brick wall trying to locate pixman on my system.
> See the following responses when attempting to use your suggested
command:
>
> excalibur:~jraby
> > idconfig -p | grep libpixman
> -bash: idconfig: command not found
> excalibur:~jraby
> > /sbin/idconfig -p | grep libpixman
> -bash: /sbin/idconfig: No such file or directory excalibur:~jraby
> > idconfig
> If 'idconfig' is not a typo you can run the following command to
> lookup the package that contains the binary:
> command-not-found idconfig
> -bash: idconfig: command not found
> excalibur:~jraby
> > command-not-found idconfig
> excalibur:~jraby
> > which libpixman
> which: no libpixman in
> (/opt/intel/compilers_and_libraries_2016.0.109/linux/
> bin/intel64:/opt/intel/compilers_and_libraries_2016.
> 0.109/linux/mpi/intel64/bin:/opt/intel/debugger_2016/gdb/
> intel64_mic/bin:/opt/cray/hdf5/1.8.13/bin:/opt/cray/
> netcdf/4.3.2/bin:/opt/cray/mpt/7.1.0/gni/bin:/opt/cray/
> rca/1.0.0-2.0502.53711.3.127.ari/bin:/opt/cray/alps/5.2.1-
> 2.0502.9041.11.6.ari/sbin:/opt/cray/alps/5.2.1-2.0502.
> 9041.11.6.ari/bin:/opt/cray/dvs/2.5_0.9.0-1.0502.1873.1.
> 145.ari/bin:/opt/cray/xpmem/0.1-2.0502.55507.3.2.ari/bin:/
> opt/cray/dmapp/7.0.1-1.0502.9501.5.219.ari/bin:/opt/cray/
> pmi/5.0.8-1.0000.10843.170.1.ari/bin:/opt/cray/ugni/5.0-1.
> 0502.9685.4.24.ari/bin:/opt/cray/udreg/2.3.2-1.0502.9275.
> 1.12.ari/bin:/usr/people/PBS/SLB:/app/unsupported/BC:/usr/
> krb5/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/
> default/bin:/opt/pbs/default/bin:/opt/cray/craype/2.4.1/
> bin:/opt/cray/switch/1.0-1.0502.60522.1.61.ari/bin:/opt/
> cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/
> 3.2.10.3/bin:/usr/local/bin:/usr/bin:/bin:/u
> sr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/
> bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/sbin:/usr/sbin:/usr/
> lib/qt3/bin:/opt/cray/bin:/usr/brl/bin:/usr/brl/bin:/usr/
>
brl/bin:/opt/cray/netcdf/4.3.2/INTEL/140/bin:/p/home/jraby/Scripts:.)
> excalibur:~jraby
>
> Is this something I could download and compile the same way I've
been
> doing with the other libraries? If so what is the download site your
> recommend for obtaining the 0.30.0 or later version?
>
> Thanks.
>
> R/
> John
>
> -----Original Message-----
> From: Julie Prestopnik via RT [Caution-mailto:met_help at ucar.edu]
> Sent: Tuesday, January 17, 2017 1:42 PM
> To: Raby, John W CIV USARMY RDECOM ARL (US)
> <john.w.raby2.civ at mail.mil>
> Subject: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> compiling cairo library for MET V5.2 (UNCLASSIFIED)
>
> All active links contained in this email were disabled. Please
verify
> the identity of the sender, and confirm the authenticity of all
links
> contained within the message prior to copying and pasting the
address
> to a Web browser.
>
>
>
>
> ----
>
> Hi John. It looks like you need a newer version of pixman. The log
> file shows the installed pixman version is 0.24.4 and cairo requires
> 0.30.0 or later version. We are using version 0.32.6.
>
> The log file complains two issues:
> 1. missing header files (Makefile was generated with the same errors
> that we have seen) 2. pixman version <== "Requested 'pixman-1 >=
> 0.30.0' but version of Pixman is 0.24.4"
>
> If you want to check your pixman version:
>
> 1: Get the library path from the following command (check path
for
> ldconfig if get "command not found" - may be in /sbin/)
> ldconfig -p | grep libpixman
>
> 2. Check the version number by getting real file name from above.
For
> example,
> ls -l /usr/lib64/libpixman*
>
> I hope this helps!
>
> Julie
>
>
>
>
>
> On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via RT <
> met_help at ucar.edu> wrote:
>
> >
> > Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> > Transaction: Ticket created by john.w.raby2.civ at mail.mil
> > Queue: met_help
> > Subject: Problem compiling cairo library for MET V5.2
(UNCLASSIFIED)
> > Owner: Nobody
> > Requestors: john.w.raby2.civ at mail.mil
> > Status: new
> > Ticket <Caution-Caution-url:
> > Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79
> > 175 >
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> > I followed the instructions in the V5.2 tutorial and
> > downloaded/unpacked the tarball named "cairo-1.14.6.tar.xz" from
site:
> > Caution-Caution-https://cairographics.org/releases/
> >
> > After unpacking I have a configure script, but not a makefile
script.
> >
> > I ran ./configure --prefix=/p/home/jraby/cairo/cairo-1.14.6, but
> > still did not see a makefile script.
> >
> > The attached log file documents several errors and a catastrophic
> > failure as
> > follows:
> >
> > "conftest.c(52): catastrophic error: cannot open source file
> > "minix/config.h"
> > #include <minix/config.h>"
> >
> > I don't see the sub directory "minix" in the install dir.
> >
> > Judging from the number and severity of the errors, it seems like
I
> > have a problem with the tarball.
> >
> > I repeated the above starting with a new download of the same
> > tarball and the result was the same.
> >
> > Is it possible I have the wrong tarball? If so, do you have
another
> > download site to acquire this tarball or a recommendation of a
more
> > updated version that's been tested?
> >
> > Do you have any suggestions on a way to resolve this issue?
> >
> > Thanks.
> >
> > R/
> > John
> >
> > Mr John W. Raby, Meteorologist
> > U.S. Army Research Laboratory
> > White Sands Missile Range, NM 88002
> > (575) 678-2004 DSN 258-2004
> > FAX (575) 678-1230 DSN 258-1230
> > Email: john.w.raby2.civ at mail.mil
> >
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> >
>
>
> --
> Julie Prestopnik
> National Center for Atmospheric Research Research Applications
> Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research Research Applications
Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
CLASSIFICATION: UNCLASSIFIED
------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Julie Prestopnik
Time: Tue Jan 17 14:46:54 2017
Hi John.
"I didn't compile libpixman myself, so it must have been compiled as
part
of the overall system by the administrators."
Yes, I suspect that is the case. I don't have any experience with
pixman
either. I hope your administrators will be able to help.
Julie
On Tue, Jan 17, 2017 at 2:34 PM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
> CLASSIFICATION: UNCLASSIFIED
>
> Julie -
>
> You are correct. Thanks for catching it so quickly. See the
following:
>
> excalibur:~jraby/cairo
> > /sbin/ldconfig -p | grep libpixman
> libpixman-1.so.0 (libc6,x86-64) => /usr/lib64/libpixman-
1.so.0
> libpixman-1.so.0 (libc6) => /usr/lib/libpixman-1.so.0
> libpixman-1.so (libc6,x86-64) => /usr/lib64/libpixman-1.so
> excalibur:~jraby/cairo
>
> I used the other command (ls -l) to find out the version:
>
> > ls -l /usr/lib64/libpixman-1.so
> lrwxrwxrwx 1 root root 21 Apr 7 2015 /usr/lib64/libpixman-1.so ->
> libpixman-1.so.0.24.4*
> excalibur:~jraby/cairo
> > ls -l /usr/lib/libpixman-1.so.0
> lrwxrwxrwx 1 root root 21 Jan 29 2015 /usr/lib/libpixman-1.so.0 ->
> libpixman-1.so.0.24.4*
> excalibur:~jraby/cairo
>
> This confirms what was noted in the log file as you pointed out.
>
> I didn't compile libpixman myself, so it must have been compiled as
part of
> the overall system by the administrators.
>
> R/
> John
>
> -----Original Message-----
> From: Julie Prestopnik via RT [mailto:met_help at ucar.edu]
> Sent: Tuesday, January 17, 2017 2:19 PM
> To: Raby, John W CIV USARMY RDECOM ARL (US)
<john.w.raby2.civ at mail.mil>
> Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> compiling
> cairo library for MET V5.2 (UNCLASSIFIED)
>
> All active links contained in this email were disabled. Please
verify the
> identity of the sender, and confirm the authenticity of all links
contained
> within the message prior to copying and pasting the address to a Web
> browser.
>
>
>
>
> ----
>
> Hi John.
>
> It looks like you have "idconfig" note the "i" (lower case i), but
it
> should
> be "l" (lower case l).
>
> Try copying and pasting this to see if it lives in /sbin:
>
> ls /sbin/ldconfig
>
> I hope that helps!
>
> Julie
>
> On Tue, Jan 17, 2017 at 1:58 PM, Raby, John W USA CIV via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <Caution-url:
> > Caution-https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> > Julie -
> >
> > I'm running into a brick wall trying to locate pixman on my
system.
> > See the following responses when attempting to use your suggested
> command:
> >
> > excalibur:~jraby
> > > idconfig -p | grep libpixman
> > -bash: idconfig: command not found
> > excalibur:~jraby
> > > /sbin/idconfig -p | grep libpixman
> > -bash: /sbin/idconfig: No such file or directory excalibur:~jraby
> > > idconfig
> > If 'idconfig' is not a typo you can run the following command to
> > lookup the package that contains the binary:
> > command-not-found idconfig
> > -bash: idconfig: command not found
> > excalibur:~jraby
> > > command-not-found idconfig
> > excalibur:~jraby
> > > which libpixman
> > which: no libpixman in
> > (/opt/intel/compilers_and_libraries_2016.0.109/linux/
> > bin/intel64:/opt/intel/compilers_and_libraries_2016.
> > 0.109/linux/mpi/intel64/bin:/opt/intel/debugger_2016/gdb/
> > intel64_mic/bin:/opt/cray/hdf5/1.8.13/bin:/opt/cray/
> > netcdf/4.3.2/bin:/opt/cray/mpt/7.1.0/gni/bin:/opt/cray/
> > rca/1.0.0-2.0502.53711.3.127.ari/bin:/opt/cray/alps/5.2.1-
> > 2.0502.9041.11.6.ari/sbin:/opt/cray/alps/5.2.1-2.0502.
> > 9041.11.6.ari/bin:/opt/cray/dvs/2.5_0.9.0-1.0502.1873.1.
> > 145.ari/bin:/opt/cray/xpmem/0.1-2.0502.55507.3.2.ari/bin:/
> > opt/cray/dmapp/7.0.1-1.0502.9501.5.219.ari/bin:/opt/cray/
> > pmi/5.0.8-1.0000.10843.170.1.ari/bin:/opt/cray/ugni/5.0-1.
> > 0502.9685.4.24.ari/bin:/opt/cray/udreg/2.3.2-1.0502.9275.
> > 1.12.ari/bin:/usr/people/PBS/SLB:/app/unsupported/BC:/usr/
> > krb5/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/
> > default/bin:/opt/pbs/default/bin:/opt/cray/craype/2.4.1/
> > bin:/opt/cray/switch/1.0-1.0502.60522.1.61.ari/bin:/opt/
> > cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/
> > 3.2.10.3/bin:/usr/local/bin:/usr/bin:/bin:/u
> > sr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/
> > bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/sbin:/usr/sbin:/usr/
> > lib/qt3/bin:/opt/cray/bin:/usr/brl/bin:/usr/brl/bin:/usr/
> >
brl/bin:/opt/cray/netcdf/4.3.2/INTEL/140/bin:/p/home/jraby/Scripts:.)
> > excalibur:~jraby
> >
> > Is this something I could download and compile the same way I've
been
> > doing with the other libraries? If so what is the download site
your
> > recommend for obtaining the 0.30.0 or later version?
> >
> > Thanks.
> >
> > R/
> > John
> >
> > -----Original Message-----
> > From: Julie Prestopnik via RT [Caution-mailto:met_help at ucar.edu]
> > Sent: Tuesday, January 17, 2017 1:42 PM
> > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > <john.w.raby2.civ at mail.mil>
> > Subject: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> >
> > All active links contained in this email were disabled. Please
verify
> > the identity of the sender, and confirm the authenticity of all
links
> > contained within the message prior to copying and pasting the
address
> > to a Web browser.
> >
> >
> >
> >
> > ----
> >
> > Hi John. It looks like you need a newer version of pixman. The
log
> > file shows the installed pixman version is 0.24.4 and cairo
requires
> > 0.30.0 or later version. We are using version 0.32.6.
> >
> > The log file complains two issues:
> > 1. missing header files (Makefile was generated with the same
errors
> > that we have seen) 2. pixman version <== "Requested 'pixman-1 >=
> > 0.30.0' but version of Pixman is 0.24.4"
> >
> > If you want to check your pixman version:
> >
> > 1: Get the library path from the following command (check path
for
> > ldconfig if get "command not found" - may be in /sbin/)
> > ldconfig -p | grep libpixman
> >
> > 2. Check the version number by getting real file name from
above. For
> > example,
> > ls -l /usr/lib64/libpixman*
> >
> > I hope this helps!
> >
> > Julie
> >
> >
> >
> >
> >
> > On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> > > Transaction: Ticket created by john.w.raby2.civ at mail.mil
> > > Queue: met_help
> > > Subject: Problem compiling cairo library for MET V5.2
> (UNCLASSIFIED)
> > > Owner: Nobody
> > > Requestors: john.w.raby2.civ at mail.mil
> > > Status: new
> > > Ticket <Caution-Caution-url:
> > > Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79
> > > 175 >
> > >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > > I followed the instructions in the V5.2 tutorial and
> > > downloaded/unpacked the tarball named "cairo-1.14.6.tar.xz" from
site:
> > > Caution-Caution-https://cairographics.org/releases/
> > >
> > > After unpacking I have a configure script, but not a makefile
script.
> > >
> > > I ran ./configure --prefix=/p/home/jraby/cairo/cairo-1.14.6, but
> > > still did not see a makefile script.
> > >
> > > The attached log file documents several errors and a
catastrophic
> > > failure as
> > > follows:
> > >
> > > "conftest.c(52): catastrophic error: cannot open source file
> > > "minix/config.h"
> > > #include <minix/config.h>"
> > >
> > > I don't see the sub directory "minix" in the install dir.
> > >
> > > Judging from the number and severity of the errors, it seems
like I
> > > have a problem with the tarball.
> > >
> > > I repeated the above starting with a new download of the same
> > > tarball and the result was the same.
> > >
> > > Is it possible I have the wrong tarball? If so, do you have
another
> > > download site to acquire this tarball or a recommendation of a
more
> > > updated version that's been tested?
> > >
> > > Do you have any suggestions on a way to resolve this issue?
> > >
> > > Thanks.
> > >
> > > R/
> > > John
> > >
> > > Mr John W. Raby, Meteorologist
> > > U.S. Army Research Laboratory
> > > White Sands Missile Range, NM 88002
> > > (575) 678-2004 DSN 258-2004
> > > FAX (575) 678-1230 DSN 258-1230
> > > Email: john.w.raby2.civ at mail.mil
> > >
> > >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > >
> >
> >
> > --
> > Julie Prestopnik
> > National Center for Atmospheric Research Research Applications
> > Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> >
>
>
> --
> Julie Prestopnik
> National Center for Atmospheric Research Research Applications
Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Raby, John W USA CIV
Time: Tue Jan 17 14:55:12 2017
CLASSIFICATION: UNCLASSIFIED
I see the following:
https://cairographics.org/releases/pixman-0.32.6.tar.gz
Could I just compile it myself using similar commands as I've used for
the
other libraries?
R/
John
-----Original Message-----
From: Julie Prestopnik via RT [mailto:met_help at ucar.edu]
Sent: Tuesday, January 17, 2017 2:47 PM
To: Raby, John W CIV USARMY RDECOM ARL (US)
<john.w.raby2.civ at mail.mil>
Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
compiling
cairo library for MET V5.2 (UNCLASSIFIED)
All active links contained in this email were disabled. Please verify
the
identity of the sender, and confirm the authenticity of all links
contained
within the message prior to copying and pasting the address to a Web
browser.
----
Hi John.
"I didn't compile libpixman myself, so it must have been compiled as
part of
the overall system by the administrators."
Yes, I suspect that is the case. I don't have any experience with
pixman
either. I hope your administrators will be able to help.
Julie
On Tue, Jan 17, 2017 at 2:34 PM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> <Caution-url:
> Caution-https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
> CLASSIFICATION: UNCLASSIFIED
>
> Julie -
>
> You are correct. Thanks for catching it so quickly. See the
following:
>
> excalibur:~jraby/cairo
> > /sbin/ldconfig -p | grep libpixman
> libpixman-1.so.0 (libc6,x86-64) => /usr/lib64/libpixman-
1.so.0
> libpixman-1.so.0 (libc6) => /usr/lib/libpixman-1.so.0
> libpixman-1.so (libc6,x86-64) => /usr/lib64/libpixman-1.so
> excalibur:~jraby/cairo
>
> I used the other command (ls -l) to find out the version:
>
> > ls -l /usr/lib64/libpixman-1.so
> lrwxrwxrwx 1 root root 21 Apr 7 2015 /usr/lib64/libpixman-1.so ->
> libpixman-1.so.0.24.4*
> excalibur:~jraby/cairo
> > ls -l /usr/lib/libpixman-1.so.0
> lrwxrwxrwx 1 root root 21 Jan 29 2015 /usr/lib/libpixman-1.so.0 ->
> libpixman-1.so.0.24.4*
> excalibur:~jraby/cairo
>
> This confirms what was noted in the log file as you pointed out.
>
> I didn't compile libpixman myself, so it must have been compiled as
> part of the overall system by the administrators.
>
> R/
> John
>
> -----Original Message-----
> From: Julie Prestopnik via RT [Caution-mailto:met_help at ucar.edu]
> Sent: Tuesday, January 17, 2017 2:19 PM
> To: Raby, John W CIV USARMY RDECOM ARL (US)
> <john.w.raby2.civ at mail.mil>
> Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> compiling cairo library for MET V5.2 (UNCLASSIFIED)
>
> All active links contained in this email were disabled. Please
verify
> the identity of the sender, and confirm the authenticity of all
links
> contained within the message prior to copying and pasting the
address
> to a Web browser.
>
>
>
>
> ----
>
> Hi John.
>
> It looks like you have "idconfig" note the "i" (lower case i), but
it
> should be "l" (lower case l).
>
> Try copying and pasting this to see if it lives in /sbin:
>
> ls /sbin/ldconfig
>
> I hope that helps!
>
> Julie
>
> On Tue, Jan 17, 2017 at 1:58 PM, Raby, John W USA CIV via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <Caution-Caution-url:
> > Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79
> > 175 >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> > Julie -
> >
> > I'm running into a brick wall trying to locate pixman on my
system.
> > See the following responses when attempting to use your suggested
> command:
> >
> > excalibur:~jraby
> > > idconfig -p | grep libpixman
> > -bash: idconfig: command not found
> > excalibur:~jraby
> > > /sbin/idconfig -p | grep libpixman
> > -bash: /sbin/idconfig: No such file or directory excalibur:~jraby
> > > idconfig
> > If 'idconfig' is not a typo you can run the following command to
> > lookup the package that contains the binary:
> > command-not-found idconfig
> > -bash: idconfig: command not found
> > excalibur:~jraby
> > > command-not-found idconfig
> > excalibur:~jraby
> > > which libpixman
> > which: no libpixman in
> > (/opt/intel/compilers_and_libraries_2016.0.109/linux/
> > bin/intel64:/opt/intel/compilers_and_libraries_2016.
> > 0.109/linux/mpi/intel64/bin:/opt/intel/debugger_2016/gdb/
> > intel64_mic/bin:/opt/cray/hdf5/1.8.13/bin:/opt/cray/
> > netcdf/4.3.2/bin:/opt/cray/mpt/7.1.0/gni/bin:/opt/cray/
> > rca/1.0.0-2.0502.53711.3.127.ari/bin:/opt/cray/alps/5.2.1-
> > 2.0502.9041.11.6.ari/sbin:/opt/cray/alps/5.2.1-2.0502.
> > 9041.11.6.ari/bin:/opt/cray/dvs/2.5_0.9.0-1.0502.1873.1.
> > 145.ari/bin:/opt/cray/xpmem/0.1-2.0502.55507.3.2.ari/bin:/
> > opt/cray/dmapp/7.0.1-1.0502.9501.5.219.ari/bin:/opt/cray/
> > pmi/5.0.8-1.0000.10843.170.1.ari/bin:/opt/cray/ugni/5.0-1.
> > 0502.9685.4.24.ari/bin:/opt/cray/udreg/2.3.2-1.0502.9275.
> > 1.12.ari/bin:/usr/people/PBS/SLB:/app/unsupported/BC:/usr/
> > krb5/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/
> > default/bin:/opt/pbs/default/bin:/opt/cray/craype/2.4.1/
> > bin:/opt/cray/switch/1.0-1.0502.60522.1.61.ari/bin:/opt/
> > cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/
> > 3.2.10.3/bin:/usr/local/bin:/usr/bin:/bin:/u
> > sr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/
> > bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/sbin:/usr/sbin:/usr/
> > lib/qt3/bin:/opt/cray/bin:/usr/brl/bin:/usr/brl/bin:/usr/
> >
brl/bin:/opt/cray/netcdf/4.3.2/INTEL/140/bin:/p/home/jraby/Scripts:.
> > )
> > excalibur:~jraby
> >
> > Is this something I could download and compile the same way I've
> > been doing with the other libraries? If so what is the download
site
> > your recommend for obtaining the 0.30.0 or later version?
> >
> > Thanks.
> >
> > R/
> > John
> >
> > -----Original Message-----
> > From: Julie Prestopnik via RT
> > [Caution-Caution-mailto:met_help at ucar.edu]
> > Sent: Tuesday, January 17, 2017 1:42 PM
> > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > <john.w.raby2.civ at mail.mil>
> > Subject: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> >
> > All active links contained in this email were disabled. Please
> > verify the identity of the sender, and confirm the authenticity of
> > all links contained within the message prior to copying and
pasting
> > the address to a Web browser.
> >
> >
> >
> >
> > ----
> >
> > Hi John. It looks like you need a newer version of pixman. The
log
> > file shows the installed pixman version is 0.24.4 and cairo
requires
> > 0.30.0 or later version. We are using version 0.32.6.
> >
> > The log file complains two issues:
> > 1. missing header files (Makefile was generated with the same
errors
> > that we have seen) 2. pixman version <== "Requested 'pixman-1 >=
> > 0.30.0' but version of Pixman is 0.24.4"
> >
> > If you want to check your pixman version:
> >
> > 1: Get the library path from the following command (check path
for
> > ldconfig if get "command not found" - may be in /sbin/)
> > ldconfig -p | grep libpixman
> >
> > 2. Check the version number by getting real file name from
above. For
> > example,
> > ls -l /usr/lib64/libpixman*
> >
> > I hope this helps!
> >
> > Julie
> >
> >
> >
> >
> >
> > On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> > > Transaction: Ticket created by john.w.raby2.civ at mail.mil
> > > Queue: met_help
> > > Subject: Problem compiling cairo library for MET V5.2
> (UNCLASSIFIED)
> > > Owner: Nobody
> > > Requestors: john.w.raby2.civ at mail.mil
> > > Status: new
> > > Ticket <Caution-Caution-Caution-url:
> > > Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > html?id=79
> > > 175 >
> > >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > > I followed the instructions in the V5.2 tutorial and
> > > downloaded/unpacked the tarball named "cairo-1.14.6.tar.xz" from
site:
> > > Caution-Caution-Caution-https://cairographics.org/releases/
> > >
> > > After unpacking I have a configure script, but not a makefile
script.
> > >
> > > I ran ./configure --prefix=/p/home/jraby/cairo/cairo-1.14.6, but
> > > still did not see a makefile script.
> > >
> > > The attached log file documents several errors and a
catastrophic
> > > failure as
> > > follows:
> > >
> > > "conftest.c(52): catastrophic error: cannot open source file
> > > "minix/config.h"
> > > #include <minix/config.h>"
> > >
> > > I don't see the sub directory "minix" in the install dir.
> > >
> > > Judging from the number and severity of the errors, it seems
like
> > > I have a problem with the tarball.
> > >
> > > I repeated the above starting with a new download of the same
> > > tarball and the result was the same.
> > >
> > > Is it possible I have the wrong tarball? If so, do you have
> > > another download site to acquire this tarball or a
recommendation
> > > of a more updated version that's been tested?
> > >
> > > Do you have any suggestions on a way to resolve this issue?
> > >
> > > Thanks.
> > >
> > > R/
> > > John
> > >
> > > Mr John W. Raby, Meteorologist
> > > U.S. Army Research Laboratory
> > > White Sands Missile Range, NM 88002
> > > (575) 678-2004 DSN 258-2004
> > > FAX (575) 678-1230 DSN 258-1230
> > > Email: john.w.raby2.civ at mail.mil
> > >
> > >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > >
> >
> >
> > --
> > Julie Prestopnik
> > National Center for Atmospheric Research Research Applications
> > Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> >
>
>
> --
> Julie Prestopnik
> National Center for Atmospheric Research Research Applications
> Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research Research Applications
Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
CLASSIFICATION: UNCLASSIFIED
------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Julie Prestopnik
Time: Tue Jan 17 15:02:23 2017
Hi John.
This is outside my area of expertise, but I don't think it would hurt
to
try it.
Julie
On Tue, Jan 17, 2017 at 2:55 PM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
> CLASSIFICATION: UNCLASSIFIED
>
> I see the following:
>
> https://cairographics.org/releases/pixman-0.32.6.tar.gz
>
> Could I just compile it myself using similar commands as I've used
for the
> other libraries?
>
> R/
> John
>
>
> -----Original Message-----
> From: Julie Prestopnik via RT [mailto:met_help at ucar.edu]
> Sent: Tuesday, January 17, 2017 2:47 PM
> To: Raby, John W CIV USARMY RDECOM ARL (US)
<john.w.raby2.civ at mail.mil>
> Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> compiling
> cairo library for MET V5.2 (UNCLASSIFIED)
>
> All active links contained in this email were disabled. Please
verify the
> identity of the sender, and confirm the authenticity of all links
contained
> within the message prior to copying and pasting the address to a Web
> browser.
>
>
>
>
> ----
>
> Hi John.
>
> "I didn't compile libpixman myself, so it must have been compiled as
part
> of
> the overall system by the administrators."
>
> Yes, I suspect that is the case. I don't have any experience with
pixman
> either. I hope your administrators will be able to help.
>
> Julie
>
> On Tue, Jan 17, 2017 at 2:34 PM, Raby, John W USA CIV via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <Caution-url:
> > Caution-https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> > Julie -
> >
> > You are correct. Thanks for catching it so quickly. See the
following:
> >
> > excalibur:~jraby/cairo
> > > /sbin/ldconfig -p | grep libpixman
> > libpixman-1.so.0 (libc6,x86-64) => /usr/lib64/libpixman-
1.so.0
> > libpixman-1.so.0 (libc6) => /usr/lib/libpixman-1.so.0
> > libpixman-1.so (libc6,x86-64) => /usr/lib64/libpixman-1.so
> > excalibur:~jraby/cairo
> >
> > I used the other command (ls -l) to find out the version:
> >
> > > ls -l /usr/lib64/libpixman-1.so
> > lrwxrwxrwx 1 root root 21 Apr 7 2015 /usr/lib64/libpixman-1.so
->
> > libpixman-1.so.0.24.4*
> > excalibur:~jraby/cairo
> > > ls -l /usr/lib/libpixman-1.so.0
> > lrwxrwxrwx 1 root root 21 Jan 29 2015 /usr/lib/libpixman-1.so.0
->
> > libpixman-1.so.0.24.4*
> > excalibur:~jraby/cairo
> >
> > This confirms what was noted in the log file as you pointed out.
> >
> > I didn't compile libpixman myself, so it must have been compiled
as
> > part of the overall system by the administrators.
> >
> > R/
> > John
> >
> > -----Original Message-----
> > From: Julie Prestopnik via RT [Caution-mailto:met_help at ucar.edu]
> > Sent: Tuesday, January 17, 2017 2:19 PM
> > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > <john.w.raby2.civ at mail.mil>
> > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> >
> > All active links contained in this email were disabled. Please
verify
> > the identity of the sender, and confirm the authenticity of all
links
> > contained within the message prior to copying and pasting the
address
> > to a Web browser.
> >
> >
> >
> >
> > ----
> >
> > Hi John.
> >
> > It looks like you have "idconfig" note the "i" (lower case i), but
it
> > should be "l" (lower case l).
> >
> > Try copying and pasting this to see if it lives in /sbin:
> >
> > ls /sbin/ldconfig
> >
> > I hope that helps!
> >
> > Julie
> >
> > On Tue, Jan 17, 2017 at 1:58 PM, Raby, John W USA CIV via RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > <Caution-Caution-url:
> > > Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79
> > > 175 >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > > Julie -
> > >
> > > I'm running into a brick wall trying to locate pixman on my
system.
> > > See the following responses when attempting to use your
suggested
> > command:
> > >
> > > excalibur:~jraby
> > > > idconfig -p | grep libpixman
> > > -bash: idconfig: command not found
> > > excalibur:~jraby
> > > > /sbin/idconfig -p | grep libpixman
> > > -bash: /sbin/idconfig: No such file or directory
excalibur:~jraby
> > > > idconfig
> > > If 'idconfig' is not a typo you can run the following command to
> > > lookup the package that contains the binary:
> > > command-not-found idconfig
> > > -bash: idconfig: command not found
> > > excalibur:~jraby
> > > > command-not-found idconfig
> > > excalibur:~jraby
> > > > which libpixman
> > > which: no libpixman in
> > > (/opt/intel/compilers_and_libraries_2016.0.109/linux/
> > > bin/intel64:/opt/intel/compilers_and_libraries_2016.
> > > 0.109/linux/mpi/intel64/bin:/opt/intel/debugger_2016/gdb/
> > > intel64_mic/bin:/opt/cray/hdf5/1.8.13/bin:/opt/cray/
> > > netcdf/4.3.2/bin:/opt/cray/mpt/7.1.0/gni/bin:/opt/cray/
> > > rca/1.0.0-2.0502.53711.3.127.ari/bin:/opt/cray/alps/5.2.1-
> > > 2.0502.9041.11.6.ari/sbin:/opt/cray/alps/5.2.1-2.0502.
> > > 9041.11.6.ari/bin:/opt/cray/dvs/2.5_0.9.0-1.0502.1873.1.
> > > 145.ari/bin:/opt/cray/xpmem/0.1-2.0502.55507.3.2.ari/bin:/
> > > opt/cray/dmapp/7.0.1-1.0502.9501.5.219.ari/bin:/opt/cray/
> > > pmi/5.0.8-1.0000.10843.170.1.ari/bin:/opt/cray/ugni/5.0-1.
> > > 0502.9685.4.24.ari/bin:/opt/cray/udreg/2.3.2-1.0502.9275.
> > > 1.12.ari/bin:/usr/people/PBS/SLB:/app/unsupported/BC:/usr/
> > > krb5/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/
> > > default/bin:/opt/pbs/default/bin:/opt/cray/craype/2.4.1/
> > > bin:/opt/cray/switch/1.0-1.0502.60522.1.61.ari/bin:/opt/
> > > cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/
> > > 3.2.10.3/bin:/usr/local/bin:/usr/bin:/bin:/u
> > > sr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/
> > > bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/sbin:/usr/sbin:/usr/
> > > lib/qt3/bin:/opt/cray/bin:/usr/brl/bin:/usr/brl/bin:/usr/
> > >
brl/bin:/opt/cray/netcdf/4.3.2/INTEL/140/bin:/p/home/jraby/Scripts:.
> > > )
> > > excalibur:~jraby
> > >
> > > Is this something I could download and compile the same way I've
> > > been doing with the other libraries? If so what is the download
site
> > > your recommend for obtaining the 0.30.0 or later version?
> > >
> > > Thanks.
> > >
> > > R/
> > > John
> > >
> > > -----Original Message-----
> > > From: Julie Prestopnik via RT
> > > [Caution-Caution-mailto:met_help at ucar.edu]
> > > Sent: Tuesday, January 17, 2017 1:42 PM
> > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > <john.w.raby2.civ at mail.mil>
> > > Subject: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > >
> > > All active links contained in this email were disabled. Please
> > > verify the identity of the sender, and confirm the authenticity
of
> > > all links contained within the message prior to copying and
pasting
> > > the address to a Web browser.
> > >
> > >
> > >
> > >
> > > ----
> > >
> > > Hi John. It looks like you need a newer version of pixman. The
log
> > > file shows the installed pixman version is 0.24.4 and cairo
requires
> > > 0.30.0 or later version. We are using version 0.32.6.
> > >
> > > The log file complains two issues:
> > > 1. missing header files (Makefile was generated with the same
errors
> > > that we have seen) 2. pixman version <== "Requested 'pixman-1 >=
> > > 0.30.0' but version of Pixman is 0.24.4"
> > >
> > > If you want to check your pixman version:
> > >
> > > 1: Get the library path from the following command (check
path for
> > > ldconfig if get "command not found" - may be in /sbin/)
> > > ldconfig -p | grep libpixman
> > >
> > > 2. Check the version number by getting real file name from
above.
> For
> > > example,
> > > ls -l /usr/lib64/libpixman*
> > >
> > > I hope this helps!
> > >
> > > Julie
> > >
> > >
> > >
> > >
> > >
> > > On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via RT <
> > > met_help at ucar.edu> wrote:
> > >
> > > >
> > > > Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> > > > Transaction: Ticket created by john.w.raby2.civ at mail.mil
> > > > Queue: met_help
> > > > Subject: Problem compiling cairo library for MET V5.2
> > (UNCLASSIFIED)
> > > > Owner: Nobody
> > > > Requestors: john.w.raby2.civ at mail.mil
> > > > Status: new
> > > > Ticket <Caution-Caution-Caution-url:
> > > > Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > > html?id=79
> > > > 175 >
> > > >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > > I followed the instructions in the V5.2 tutorial and
> > > > downloaded/unpacked the tarball named "cairo-1.14.6.tar.xz"
from
> site:
> > > > Caution-Caution-Caution-https://cairographics.org/releases/
> > > >
> > > > After unpacking I have a configure script, but not a makefile
script.
> > > >
> > > > I ran ./configure --prefix=/p/home/jraby/cairo/cairo-1.14.6,
but
> > > > still did not see a makefile script.
> > > >
> > > > The attached log file documents several errors and a
catastrophic
> > > > failure as
> > > > follows:
> > > >
> > > > "conftest.c(52): catastrophic error: cannot open source file
> > > > "minix/config.h"
> > > > #include <minix/config.h>"
> > > >
> > > > I don't see the sub directory "minix" in the install dir.
> > > >
> > > > Judging from the number and severity of the errors, it seems
like
> > > > I have a problem with the tarball.
> > > >
> > > > I repeated the above starting with a new download of the same
> > > > tarball and the result was the same.
> > > >
> > > > Is it possible I have the wrong tarball? If so, do you have
> > > > another download site to acquire this tarball or a
recommendation
> > > > of a more updated version that's been tested?
> > > >
> > > > Do you have any suggestions on a way to resolve this issue?
> > > >
> > > > Thanks.
> > > >
> > > > R/
> > > > John
> > > >
> > > > Mr John W. Raby, Meteorologist
> > > > U.S. Army Research Laboratory
> > > > White Sands Missile Range, NM 88002
> > > > (575) 678-2004 DSN 258-2004
> > > > FAX (575) 678-1230 DSN 258-1230
> > > > Email: john.w.raby2.civ at mail.mil
> > > >
> > > >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > >
> > >
> > >
> > > --
> > > Julie Prestopnik
> > > National Center for Atmospheric Research Research Applications
> > > Laboratory
> > > Phone: 303.497.8399
> > > Email: jpresto at ucar.edu
> > >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > >
> >
> >
> > --
> > Julie Prestopnik
> > National Center for Atmospheric Research Research Applications
> > Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> >
>
>
> --
> Julie Prestopnik
> National Center for Atmospheric Research Research Applications
Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Raby, John W USA CIV
Time: Tue Jan 17 15:11:58 2017
CLASSIFICATION: UNCLASSIFIED
Julie -
I'll give it a try and let you know the results. If it's successful,
then I
guess I would need to rerun the ./configure for Cairo, but somehow
point it to
access my compiled version of libpixman. Does this seem reasonable to
you?
Maybe the configure will find it automatically? I'm not sure how that
works.
R/
John
-----Original Message-----
From: Julie Prestopnik via RT [mailto:met_help at ucar.edu]
Sent: Tuesday, January 17, 2017 3:02 PM
To: Raby, John W CIV USARMY RDECOM ARL (US)
<john.w.raby2.civ at mail.mil>
Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
compiling
cairo library for MET V5.2 (UNCLASSIFIED)
All active links contained in this email were disabled. Please verify
the
identity of the sender, and confirm the authenticity of all links
contained
within the message prior to copying and pasting the address to a Web
browser.
----
Hi John.
This is outside my area of expertise, but I don't think it would hurt
to try
it.
Julie
On Tue, Jan 17, 2017 at 2:55 PM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> <Caution-url:
> Caution-https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
> CLASSIFICATION: UNCLASSIFIED
>
> I see the following:
>
> Caution-https://cairographics.org/releases/pixman-0.32.6.tar.gz
>
> Could I just compile it myself using similar commands as I've used
for
> the other libraries?
>
> R/
> John
>
>
> -----Original Message-----
> From: Julie Prestopnik via RT [Caution-mailto:met_help at ucar.edu]
> Sent: Tuesday, January 17, 2017 2:47 PM
> To: Raby, John W CIV USARMY RDECOM ARL (US)
> <john.w.raby2.civ at mail.mil>
> Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> compiling cairo library for MET V5.2 (UNCLASSIFIED)
>
> All active links contained in this email were disabled. Please
verify
> the identity of the sender, and confirm the authenticity of all
links
> contained within the message prior to copying and pasting the
address
> to a Web browser.
>
>
>
>
> ----
>
> Hi John.
>
> "I didn't compile libpixman myself, so it must have been compiled as
> part of the overall system by the administrators."
>
> Yes, I suspect that is the case. I don't have any experience with
> pixman either. I hope your administrators will be able to help.
>
> Julie
>
> On Tue, Jan 17, 2017 at 2:34 PM, Raby, John W USA CIV via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <Caution-Caution-url:
> > Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79
> > 175 >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> > Julie -
> >
> > You are correct. Thanks for catching it so quickly. See the
following:
> >
> > excalibur:~jraby/cairo
> > > /sbin/ldconfig -p | grep libpixman
> > libpixman-1.so.0 (libc6,x86-64) => /usr/lib64/libpixman-
1.so.0
> > libpixman-1.so.0 (libc6) => /usr/lib/libpixman-1.so.0
> > libpixman-1.so (libc6,x86-64) => /usr/lib64/libpixman-1.so
> > excalibur:~jraby/cairo
> >
> > I used the other command (ls -l) to find out the version:
> >
> > > ls -l /usr/lib64/libpixman-1.so
> > lrwxrwxrwx 1 root root 21 Apr 7 2015 /usr/lib64/libpixman-1.so
->
> > libpixman-1.so.0.24.4*
> > excalibur:~jraby/cairo
> > > ls -l /usr/lib/libpixman-1.so.0
> > lrwxrwxrwx 1 root root 21 Jan 29 2015 /usr/lib/libpixman-1.so.0
->
> > libpixman-1.so.0.24.4*
> > excalibur:~jraby/cairo
> >
> > This confirms what was noted in the log file as you pointed out.
> >
> > I didn't compile libpixman myself, so it must have been compiled
as
> > part of the overall system by the administrators.
> >
> > R/
> > John
> >
> > -----Original Message-----
> > From: Julie Prestopnik via RT
> > [Caution-Caution-mailto:met_help at ucar.edu]
> > Sent: Tuesday, January 17, 2017 2:19 PM
> > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > <john.w.raby2.civ at mail.mil>
> > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> >
> > All active links contained in this email were disabled. Please
> > verify the identity of the sender, and confirm the authenticity of
> > all links contained within the message prior to copying and
pasting
> > the address to a Web browser.
> >
> >
> >
> >
> > ----
> >
> > Hi John.
> >
> > It looks like you have "idconfig" note the "i" (lower case i), but
> > it should be "l" (lower case l).
> >
> > Try copying and pasting this to see if it lives in /sbin:
> >
> > ls /sbin/ldconfig
> >
> > I hope that helps!
> >
> > Julie
> >
> > On Tue, Jan 17, 2017 at 1:58 PM, Raby, John W USA CIV via RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > <Caution-Caution-Caution-url:
> > > Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > html?id=79
> > > 175 >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > > Julie -
> > >
> > > I'm running into a brick wall trying to locate pixman on my
system.
> > > See the following responses when attempting to use your
suggested
> > command:
> > >
> > > excalibur:~jraby
> > > > idconfig -p | grep libpixman
> > > -bash: idconfig: command not found excalibur:~jraby
> > > > /sbin/idconfig -p | grep libpixman
> > > -bash: /sbin/idconfig: No such file or directory
excalibur:~jraby
> > > > idconfig
> > > If 'idconfig' is not a typo you can run the following command to
> > > lookup the package that contains the binary:
> > > command-not-found idconfig
> > > -bash: idconfig: command not found excalibur:~jraby
> > > > command-not-found idconfig
> > > excalibur:~jraby
> > > > which libpixman
> > > which: no libpixman in
> > > (/opt/intel/compilers_and_libraries_2016.0.109/linux/
> > > bin/intel64:/opt/intel/compilers_and_libraries_2016.
> > > 0.109/linux/mpi/intel64/bin:/opt/intel/debugger_2016/gdb/
> > > intel64_mic/bin:/opt/cray/hdf5/1.8.13/bin:/opt/cray/
> > > netcdf/4.3.2/bin:/opt/cray/mpt/7.1.0/gni/bin:/opt/cray/
> > > rca/1.0.0-2.0502.53711.3.127.ari/bin:/opt/cray/alps/5.2.1-
> > > 2.0502.9041.11.6.ari/sbin:/opt/cray/alps/5.2.1-2.0502.
> > > 9041.11.6.ari/bin:/opt/cray/dvs/2.5_0.9.0-1.0502.1873.1.
> > > 145.ari/bin:/opt/cray/xpmem/0.1-2.0502.55507.3.2.ari/bin:/
> > > opt/cray/dmapp/7.0.1-1.0502.9501.5.219.ari/bin:/opt/cray/
> > > pmi/5.0.8-1.0000.10843.170.1.ari/bin:/opt/cray/ugni/5.0-1.
> > > 0502.9685.4.24.ari/bin:/opt/cray/udreg/2.3.2-1.0502.9275.
> > > 1.12.ari/bin:/usr/people/PBS/SLB:/app/unsupported/BC:/usr/
> > > krb5/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/
> > > default/bin:/opt/pbs/default/bin:/opt/cray/craype/2.4.1/
> > > bin:/opt/cray/switch/1.0-1.0502.60522.1.61.ari/bin:/opt/
> > > cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/
> > > 3.2.10.3/bin:/usr/local/bin:/usr/bin:/bin:/u
> > > sr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/
> > > bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/sbin:/usr/sbin:/usr/
> > > lib/qt3/bin:/opt/cray/bin:/usr/brl/bin:/usr/brl/bin:/usr/
> > >
brl/bin:/opt/cray/netcdf/4.3.2/INTEL/140/bin:/p/home/jraby/Scripts:.
> > > )
> > > excalibur:~jraby
> > >
> > > Is this something I could download and compile the same way I've
> > > been doing with the other libraries? If so what is the download
> > > site your recommend for obtaining the 0.30.0 or later version?
> > >
> > > Thanks.
> > >
> > > R/
> > > John
> > >
> > > -----Original Message-----
> > > From: Julie Prestopnik via RT
> > > [Caution-Caution-Caution-mailto:met_help at ucar.edu]
> > > Sent: Tuesday, January 17, 2017 1:42 PM
> > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > <john.w.raby2.civ at mail.mil>
> > > Subject: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > >
> > > All active links contained in this email were disabled. Please
> > > verify the identity of the sender, and confirm the authenticity
of
> > > all links contained within the message prior to copying and
> > > pasting the address to a Web browser.
> > >
> > >
> > >
> > >
> > > ----
> > >
> > > Hi John. It looks like you need a newer version of pixman. The
> > > log file shows the installed pixman version is 0.24.4 and cairo
> > > requires
> > > 0.30.0 or later version. We are using version 0.32.6.
> > >
> > > The log file complains two issues:
> > > 1. missing header files (Makefile was generated with the same
> > > errors that we have seen) 2. pixman version <== "Requested
> > > 'pixman-1 >= 0.30.0' but version of Pixman is 0.24.4"
> > >
> > > If you want to check your pixman version:
> > >
> > > 1: Get the library path from the following command (check
path for
> > > ldconfig if get "command not found" - may be in /sbin/)
> > > ldconfig -p | grep libpixman
> > >
> > > 2. Check the version number by getting real file name from
above.
> For
> > > example,
> > > ls -l /usr/lib64/libpixman*
> > >
> > > I hope this helps!
> > >
> > > Julie
> > >
> > >
> > >
> > >
> > >
> > > On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via RT <
> > > met_help at ucar.edu> wrote:
> > >
> > > >
> > > > Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> > > > Transaction: Ticket created by john.w.raby2.civ at mail.mil
> > > > Queue: met_help
> > > > Subject: Problem compiling cairo library for MET V5.2
> > (UNCLASSIFIED)
> > > > Owner: Nobody
> > > > Requestors: john.w.raby2.civ at mail.mil
> > > > Status: new
> > > > Ticket <Caution-Caution-Caution-Caution-url:
> > > > Caution-Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > > html?id=79
> > > > 175 >
> > > >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > > I followed the instructions in the V5.2 tutorial and
> > > > downloaded/unpacked the tarball named "cairo-1.14.6.tar.xz"
from
> site:
> > > > Caution-Caution-Caution-Caution-
https://cairographics.org/releas
> > > > es/
> > > >
> > > > After unpacking I have a configure script, but not a makefile
script.
> > > >
> > > > I ran ./configure --prefix=/p/home/jraby/cairo/cairo-1.14.6,
but
> > > > still did not see a makefile script.
> > > >
> > > > The attached log file documents several errors and a
> > > > catastrophic failure as
> > > > follows:
> > > >
> > > > "conftest.c(52): catastrophic error: cannot open source file
> > > > "minix/config.h"
> > > > #include <minix/config.h>"
> > > >
> > > > I don't see the sub directory "minix" in the install dir.
> > > >
> > > > Judging from the number and severity of the errors, it seems
> > > > like I have a problem with the tarball.
> > > >
> > > > I repeated the above starting with a new download of the same
> > > > tarball and the result was the same.
> > > >
> > > > Is it possible I have the wrong tarball? If so, do you have
> > > > another download site to acquire this tarball or a
> > > > recommendation of a more updated version that's been tested?
> > > >
> > > > Do you have any suggestions on a way to resolve this issue?
> > > >
> > > > Thanks.
> > > >
> > > > R/
> > > > John
> > > >
> > > > Mr John W. Raby, Meteorologist
> > > > U.S. Army Research Laboratory
> > > > White Sands Missile Range, NM 88002
> > > > (575) 678-2004 DSN 258-2004
> > > > FAX (575) 678-1230 DSN 258-1230
> > > > Email: john.w.raby2.civ at mail.mil
> > > >
> > > >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > >
> > >
> > >
> > > --
> > > Julie Prestopnik
> > > National Center for Atmospheric Research Research Applications
> > > Laboratory
> > > Phone: 303.497.8399
> > > Email: jpresto at ucar.edu
> > >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > >
> >
> >
> > --
> > Julie Prestopnik
> > National Center for Atmospheric Research Research Applications
> > Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> >
>
>
> --
> Julie Prestopnik
> National Center for Atmospheric Research Research Applications
> Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research Research Applications
Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
CLASSIFICATION: UNCLASSIFIED
------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Julie Prestopnik
Time: Tue Jan 17 15:19:46 2017
Yes, that sounds reasonable. I do not think that configure will find
the
files automatically though, unless they're installed where expected.
You'll likely need to set LDFLAGS and CPPFLAGS to point to the
necessary
library files and include files, respectively, either as environment
variables or perhaps configure would accept the following:
./configure LDFLAGS=-L/shared/lib CPPFLAGS=-I/shared/include ...other
options...
Again this is outside of our expertise. You might consider consulting
with
your system administrator regarding this issue. I hope this helps.
Julie
On Tue, Jan 17, 2017 at 3:11 PM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
> CLASSIFICATION: UNCLASSIFIED
>
> Julie -
>
> I'll give it a try and let you know the results. If it's successful,
then I
> guess I would need to rerun the ./configure for Cairo, but somehow
point
> it to
> access my compiled version of libpixman. Does this seem reasonable
to you?
> Maybe the configure will find it automatically? I'm not sure how
that
> works.
>
> R/
> John
>
> -----Original Message-----
> From: Julie Prestopnik via RT [mailto:met_help at ucar.edu]
> Sent: Tuesday, January 17, 2017 3:02 PM
> To: Raby, John W CIV USARMY RDECOM ARL (US)
<john.w.raby2.civ at mail.mil>
> Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> compiling
> cairo library for MET V5.2 (UNCLASSIFIED)
>
> All active links contained in this email were disabled. Please
verify the
> identity of the sender, and confirm the authenticity of all links
contained
> within the message prior to copying and pasting the address to a Web
> browser.
>
>
>
>
> ----
>
> Hi John.
>
> This is outside my area of expertise, but I don't think it would
hurt to
> try
> it.
>
> Julie
>
> On Tue, Jan 17, 2017 at 2:55 PM, Raby, John W USA CIV via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <Caution-url:
> > Caution-https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> > I see the following:
> >
> > Caution-https://cairographics.org/releases/pixman-0.32.6.tar.gz
> >
> > Could I just compile it myself using similar commands as I've used
for
> > the other libraries?
> >
> > R/
> > John
> >
> >
> > -----Original Message-----
> > From: Julie Prestopnik via RT [Caution-mailto:met_help at ucar.edu]
> > Sent: Tuesday, January 17, 2017 2:47 PM
> > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > <john.w.raby2.civ at mail.mil>
> > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> >
> > All active links contained in this email were disabled. Please
verify
> > the identity of the sender, and confirm the authenticity of all
links
> > contained within the message prior to copying and pasting the
address
> > to a Web browser.
> >
> >
> >
> >
> > ----
> >
> > Hi John.
> >
> > "I didn't compile libpixman myself, so it must have been compiled
as
> > part of the overall system by the administrators."
> >
> > Yes, I suspect that is the case. I don't have any experience with
> > pixman either. I hope your administrators will be able to help.
> >
> > Julie
> >
> > On Tue, Jan 17, 2017 at 2:34 PM, Raby, John W USA CIV via RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > <Caution-Caution-url:
> > > Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79
> > > 175 >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > > Julie -
> > >
> > > You are correct. Thanks for catching it so quickly. See the
following:
> > >
> > > excalibur:~jraby/cairo
> > > > /sbin/ldconfig -p | grep libpixman
> > > libpixman-1.so.0 (libc6,x86-64) => /usr/lib64/libpixman-
1.so.0
> > > libpixman-1.so.0 (libc6) => /usr/lib/libpixman-1.so.0
> > > libpixman-1.so (libc6,x86-64) => /usr/lib64/libpixman-
1.so
> > > excalibur:~jraby/cairo
> > >
> > > I used the other command (ls -l) to find out the version:
> > >
> > > > ls -l /usr/lib64/libpixman-1.so
> > > lrwxrwxrwx 1 root root 21 Apr 7 2015 /usr/lib64/libpixman-1.so
->
> > > libpixman-1.so.0.24.4*
> > > excalibur:~jraby/cairo
> > > > ls -l /usr/lib/libpixman-1.so.0
> > > lrwxrwxrwx 1 root root 21 Jan 29 2015 /usr/lib/libpixman-1.so.0
->
> > > libpixman-1.so.0.24.4*
> > > excalibur:~jraby/cairo
> > >
> > > This confirms what was noted in the log file as you pointed out.
> > >
> > > I didn't compile libpixman myself, so it must have been compiled
as
> > > part of the overall system by the administrators.
> > >
> > > R/
> > > John
> > >
> > > -----Original Message-----
> > > From: Julie Prestopnik via RT
> > > [Caution-Caution-mailto:met_help at ucar.edu]
> > > Sent: Tuesday, January 17, 2017 2:19 PM
> > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > <john.w.raby2.civ at mail.mil>
> > > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
Problem
> > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > >
> > > All active links contained in this email were disabled. Please
> > > verify the identity of the sender, and confirm the authenticity
of
> > > all links contained within the message prior to copying and
pasting
> > > the address to a Web browser.
> > >
> > >
> > >
> > >
> > > ----
> > >
> > > Hi John.
> > >
> > > It looks like you have "idconfig" note the "i" (lower case i),
but
> > > it should be "l" (lower case l).
> > >
> > > Try copying and pasting this to see if it lives in /sbin:
> > >
> > > ls /sbin/ldconfig
> > >
> > > I hope that helps!
> > >
> > > Julie
> > >
> > > On Tue, Jan 17, 2017 at 1:58 PM, Raby, John W USA CIV via RT <
> > > met_help at ucar.edu> wrote:
> > >
> > > >
> > > > <Caution-Caution-Caution-url:
> > > > Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > > html?id=79
> > > > 175 >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > > Julie -
> > > >
> > > > I'm running into a brick wall trying to locate pixman on my
system.
> > > > See the following responses when attempting to use your
suggested
> > > command:
> > > >
> > > > excalibur:~jraby
> > > > > idconfig -p | grep libpixman
> > > > -bash: idconfig: command not found excalibur:~jraby
> > > > > /sbin/idconfig -p | grep libpixman
> > > > -bash: /sbin/idconfig: No such file or directory
excalibur:~jraby
> > > > > idconfig
> > > > If 'idconfig' is not a typo you can run the following command
to
> > > > lookup the package that contains the binary:
> > > > command-not-found idconfig
> > > > -bash: idconfig: command not found excalibur:~jraby
> > > > > command-not-found idconfig
> > > > excalibur:~jraby
> > > > > which libpixman
> > > > which: no libpixman in
> > > > (/opt/intel/compilers_and_libraries_2016.0.109/linux/
> > > > bin/intel64:/opt/intel/compilers_and_libraries_2016.
> > > > 0.109/linux/mpi/intel64/bin:/opt/intel/debugger_2016/gdb/
> > > > intel64_mic/bin:/opt/cray/hdf5/1.8.13/bin:/opt/cray/
> > > > netcdf/4.3.2/bin:/opt/cray/mpt/7.1.0/gni/bin:/opt/cray/
> > > > rca/1.0.0-2.0502.53711.3.127.ari/bin:/opt/cray/alps/5.2.1-
> > > > 2.0502.9041.11.6.ari/sbin:/opt/cray/alps/5.2.1-2.0502.
> > > > 9041.11.6.ari/bin:/opt/cray/dvs/2.5_0.9.0-1.0502.1873.1.
> > > > 145.ari/bin:/opt/cray/xpmem/0.1-2.0502.55507.3.2.ari/bin:/
> > > > opt/cray/dmapp/7.0.1-1.0502.9501.5.219.ari/bin:/opt/cray/
> > > > pmi/5.0.8-1.0000.10843.170.1.ari/bin:/opt/cray/ugni/5.0-1.
> > > > 0502.9685.4.24.ari/bin:/opt/cray/udreg/2.3.2-1.0502.9275.
> > > > 1.12.ari/bin:/usr/people/PBS/SLB:/app/unsupported/BC:/usr/
> > > > krb5/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/
> > > > default/bin:/opt/pbs/default/bin:/opt/cray/craype/2.4.1/
> > > > bin:/opt/cray/switch/1.0-1.0502.60522.1.61.ari/bin:/opt/
> > > > cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/
> > > > 3.2.10.3/bin:/usr/local/bin:/usr/bin:/bin:/u
> > > > sr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/
> > > > bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/sbin:/usr/sbin:/usr/
> > > > lib/qt3/bin:/opt/cray/bin:/usr/brl/bin:/usr/brl/bin:/usr/
> > > >
brl/bin:/opt/cray/netcdf/4.3.2/INTEL/140/bin:/p/home/jraby/Scripts:.
> > > > )
> > > > excalibur:~jraby
> > > >
> > > > Is this something I could download and compile the same way
I've
> > > > been doing with the other libraries? If so what is the
download
> > > > site your recommend for obtaining the 0.30.0 or later version?
> > > >
> > > > Thanks.
> > > >
> > > > R/
> > > > John
> > > >
> > > > -----Original Message-----
> > > > From: Julie Prestopnik via RT
> > > > [Caution-Caution-Caution-mailto:met_help at ucar.edu]
> > > > Sent: Tuesday, January 17, 2017 1:42 PM
> > > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > > <john.w.raby2.civ at mail.mil>
> > > > Subject: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > > >
> > > > All active links contained in this email were disabled.
Please
> > > > verify the identity of the sender, and confirm the
authenticity of
> > > > all links contained within the message prior to copying and
> > > > pasting the address to a Web browser.
> > > >
> > > >
> > > >
> > > >
> > > > ----
> > > >
> > > > Hi John. It looks like you need a newer version of pixman.
The
> > > > log file shows the installed pixman version is 0.24.4 and
cairo
> > > > requires
> > > > 0.30.0 or later version. We are using version 0.32.6.
> > > >
> > > > The log file complains two issues:
> > > > 1. missing header files (Makefile was generated with the same
> > > > errors that we have seen) 2. pixman version <== "Requested
> > > > 'pixman-1 >= 0.30.0' but version of Pixman is 0.24.4"
> > > >
> > > > If you want to check your pixman version:
> > > >
> > > > 1: Get the library path from the following command (check
path for
> > > > ldconfig if get "command not found" - may be in /sbin/)
> > > > ldconfig -p | grep libpixman
> > > >
> > > > 2. Check the version number by getting real file name from
above.
> > For
> > > > example,
> > > > ls -l /usr/lib64/libpixman*
> > > >
> > > > I hope this helps!
> > > >
> > > > Julie
> > > >
> > > >
> > > >
> > > >
> > > >
> > > > On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via RT
<
> > > > met_help at ucar.edu> wrote:
> > > >
> > > > >
> > > > > Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> > > > > Transaction: Ticket created by john.w.raby2.civ at mail.mil
> > > > > Queue: met_help
> > > > > Subject: Problem compiling cairo library for MET V5.2
> > > (UNCLASSIFIED)
> > > > > Owner: Nobody
> > > > > Requestors: john.w.raby2.civ at mail.mil
> > > > > Status: new
> > > > > Ticket <Caution-Caution-Caution-Caution-url:
> > > > > Caution-Caution-Caution-Caution-https://rt.rap.ucar.
> edu/rt/Ticket/Display.
> > > > > html?id=79
> > > > > 175 >
> > > > >
> > > > >
> > > > > CLASSIFICATION: UNCLASSIFIED
> > > > >
> > > > > I followed the instructions in the V5.2 tutorial and
> > > > > downloaded/unpacked the tarball named "cairo-1.14.6.tar.xz"
from
> > site:
> > > > > Caution-Caution-Caution-Caution-
https://cairographics.org/releas
> > > > > es/
> > > > >
> > > > > After unpacking I have a configure script, but not a
makefile
> script.
> > > > >
> > > > > I ran ./configure --prefix=/p/home/jraby/cairo/cairo-1.14.6,
but
> > > > > still did not see a makefile script.
> > > > >
> > > > > The attached log file documents several errors and a
> > > > > catastrophic failure as
> > > > > follows:
> > > > >
> > > > > "conftest.c(52): catastrophic error: cannot open source file
> > > > > "minix/config.h"
> > > > > #include <minix/config.h>"
> > > > >
> > > > > I don't see the sub directory "minix" in the install dir.
> > > > >
> > > > > Judging from the number and severity of the errors, it seems
> > > > > like I have a problem with the tarball.
> > > > >
> > > > > I repeated the above starting with a new download of the
same
> > > > > tarball and the result was the same.
> > > > >
> > > > > Is it possible I have the wrong tarball? If so, do you have
> > > > > another download site to acquire this tarball or a
> > > > > recommendation of a more updated version that's been tested?
> > > > >
> > > > > Do you have any suggestions on a way to resolve this issue?
> > > > >
> > > > > Thanks.
> > > > >
> > > > > R/
> > > > > John
> > > > >
> > > > > Mr John W. Raby, Meteorologist
> > > > > U.S. Army Research Laboratory
> > > > > White Sands Missile Range, NM 88002
> > > > > (575) 678-2004 DSN 258-2004
> > > > > FAX (575) 678-1230 DSN 258-1230
> > > > > Email: john.w.raby2.civ at mail.mil
> > > > >
> > > > >
> > > > >
> > > > > CLASSIFICATION: UNCLASSIFIED
> > > > >
> > > > >
> > > >
> > > >
> > > > --
> > > > Julie Prestopnik
> > > > National Center for Atmospheric Research Research Applications
> > > > Laboratory
> > > > Phone: 303.497.8399
> > > > Email: jpresto at ucar.edu
> > > >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > >
> > >
> > >
> > > --
> > > Julie Prestopnik
> > > National Center for Atmospheric Research Research Applications
> > > Laboratory
> > > Phone: 303.497.8399
> > > Email: jpresto at ucar.edu
> > >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > >
> >
> >
> > --
> > Julie Prestopnik
> > National Center for Atmospheric Research Research Applications
> > Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> >
>
>
> --
> Julie Prestopnik
> National Center for Atmospheric Research Research Applications
Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Raby, John W USA CIV
Time: Tue Jan 17 15:25:31 2017
CLASSIFICATION: UNCLASSIFIED
Julie -
Good information. I'll let you know what happens.
R/
John
-----Original Message-----
From: Julie Prestopnik via RT [mailto:met_help at ucar.edu]
Sent: Tuesday, January 17, 2017 3:20 PM
To: Raby, John W CIV USARMY RDECOM ARL (US)
<john.w.raby2.civ at mail.mil>
Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
compiling
cairo library for MET V5.2 (UNCLASSIFIED)
All active links contained in this email were disabled. Please verify
the
identity of the sender, and confirm the authenticity of all links
contained
within the message prior to copying and pasting the address to a Web
browser.
----
Yes, that sounds reasonable. I do not think that configure will find
the
files automatically though, unless they're installed where expected.
You'll likely need to set LDFLAGS and CPPFLAGS to point to the
necessary
library files and include files, respectively, either as environment
variables
or perhaps configure would accept the following:
./configure LDFLAGS=-L/shared/lib CPPFLAGS=-I/shared/include ...other
options...
Again this is outside of our expertise. You might consider consulting
with
your system administrator regarding this issue. I hope this helps.
Julie
On Tue, Jan 17, 2017 at 3:11 PM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> <Caution-url:
> Caution-https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
> CLASSIFICATION: UNCLASSIFIED
>
> Julie -
>
> I'll give it a try and let you know the results. If it's successful,
> then I guess I would need to rerun the ./configure for Cairo, but
> somehow point it to access my compiled version of libpixman. Does
this
> seem reasonable to you?
> Maybe the configure will find it automatically? I'm not sure how
that
> works.
>
> R/
> John
>
> -----Original Message-----
> From: Julie Prestopnik via RT [Caution-mailto:met_help at ucar.edu]
> Sent: Tuesday, January 17, 2017 3:02 PM
> To: Raby, John W CIV USARMY RDECOM ARL (US)
> <john.w.raby2.civ at mail.mil>
> Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> compiling cairo library for MET V5.2 (UNCLASSIFIED)
>
> All active links contained in this email were disabled. Please
verify
> the identity of the sender, and confirm the authenticity of all
links
> contained within the message prior to copying and pasting the
address
> to a Web browser.
>
>
>
>
> ----
>
> Hi John.
>
> This is outside my area of expertise, but I don't think it would
hurt
> to try it.
>
> Julie
>
> On Tue, Jan 17, 2017 at 2:55 PM, Raby, John W USA CIV via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <Caution-Caution-url:
> > Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79
> > 175 >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> > I see the following:
> >
> > Caution-Caution-https://cairographics.org/releases/pixman-
0.32.6.tar
> > .gz
> >
> > Could I just compile it myself using similar commands as I've used
> > for the other libraries?
> >
> > R/
> > John
> >
> >
> > -----Original Message-----
> > From: Julie Prestopnik via RT
> > [Caution-Caution-mailto:met_help at ucar.edu]
> > Sent: Tuesday, January 17, 2017 2:47 PM
> > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > <john.w.raby2.civ at mail.mil>
> > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> >
> > All active links contained in this email were disabled. Please
> > verify the identity of the sender, and confirm the authenticity of
> > all links contained within the message prior to copying and
pasting
> > the address to a Web browser.
> >
> >
> >
> >
> > ----
> >
> > Hi John.
> >
> > "I didn't compile libpixman myself, so it must have been compiled
as
> > part of the overall system by the administrators."
> >
> > Yes, I suspect that is the case. I don't have any experience with
> > pixman either. I hope your administrators will be able to help.
> >
> > Julie
> >
> > On Tue, Jan 17, 2017 at 2:34 PM, Raby, John W USA CIV via RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > <Caution-Caution-Caution-url:
> > > Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > html?id=79
> > > 175 >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > > Julie -
> > >
> > > You are correct. Thanks for catching it so quickly. See the
following:
> > >
> > > excalibur:~jraby/cairo
> > > > /sbin/ldconfig -p | grep libpixman
> > > libpixman-1.so.0 (libc6,x86-64) => /usr/lib64/libpixman-
1.so.0
> > > libpixman-1.so.0 (libc6) => /usr/lib/libpixman-1.so.0
> > > libpixman-1.so (libc6,x86-64) => /usr/lib64/libpixman-
1.so
> > > excalibur:~jraby/cairo
> > >
> > > I used the other command (ls -l) to find out the version:
> > >
> > > > ls -l /usr/lib64/libpixman-1.so
> > > lrwxrwxrwx 1 root root 21 Apr 7 2015 /usr/lib64/libpixman-1.so
> > > ->
> > > libpixman-1.so.0.24.4*
> > > excalibur:~jraby/cairo
> > > > ls -l /usr/lib/libpixman-1.so.0
> > > lrwxrwxrwx 1 root root 21 Jan 29 2015 /usr/lib/libpixman-1.so.0
> > > ->
> > > libpixman-1.so.0.24.4*
> > > excalibur:~jraby/cairo
> > >
> > > This confirms what was noted in the log file as you pointed out.
> > >
> > > I didn't compile libpixman myself, so it must have been compiled
> > > as part of the overall system by the administrators.
> > >
> > > R/
> > > John
> > >
> > > -----Original Message-----
> > > From: Julie Prestopnik via RT
> > > [Caution-Caution-Caution-mailto:met_help at ucar.edu]
> > > Sent: Tuesday, January 17, 2017 2:19 PM
> > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > <john.w.raby2.civ at mail.mil>
> > > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
Problem
> > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > >
> > > All active links contained in this email were disabled. Please
> > > verify the identity of the sender, and confirm the authenticity
of
> > > all links contained within the message prior to copying and
> > > pasting the address to a Web browser.
> > >
> > >
> > >
> > >
> > > ----
> > >
> > > Hi John.
> > >
> > > It looks like you have "idconfig" note the "i" (lower case i),
but
> > > it should be "l" (lower case l).
> > >
> > > Try copying and pasting this to see if it lives in /sbin:
> > >
> > > ls /sbin/ldconfig
> > >
> > > I hope that helps!
> > >
> > > Julie
> > >
> > > On Tue, Jan 17, 2017 at 1:58 PM, Raby, John W USA CIV via RT <
> > > met_help at ucar.edu> wrote:
> > >
> > > >
> > > > <Caution-Caution-Caution-Caution-url:
> > > > Caution-Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > > html?id=79
> > > > 175 >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > > Julie -
> > > >
> > > > I'm running into a brick wall trying to locate pixman on my
system.
> > > > See the following responses when attempting to use your
> > > > suggested
> > > command:
> > > >
> > > > excalibur:~jraby
> > > > > idconfig -p | grep libpixman
> > > > -bash: idconfig: command not found excalibur:~jraby
> > > > > /sbin/idconfig -p | grep libpixman
> > > > -bash: /sbin/idconfig: No such file or directory
> > > > excalibur:~jraby
> > > > > idconfig
> > > > If 'idconfig' is not a typo you can run the following command
to
> > > > lookup the package that contains the binary:
> > > > command-not-found idconfig
> > > > -bash: idconfig: command not found excalibur:~jraby
> > > > > command-not-found idconfig
> > > > excalibur:~jraby
> > > > > which libpixman
> > > > which: no libpixman in
> > > > (/opt/intel/compilers_and_libraries_2016.0.109/linux/
> > > > bin/intel64:/opt/intel/compilers_and_libraries_2016.
> > > > 0.109/linux/mpi/intel64/bin:/opt/intel/debugger_2016/gdb/
> > > > intel64_mic/bin:/opt/cray/hdf5/1.8.13/bin:/opt/cray/
> > > > netcdf/4.3.2/bin:/opt/cray/mpt/7.1.0/gni/bin:/opt/cray/
> > > > rca/1.0.0-2.0502.53711.3.127.ari/bin:/opt/cray/alps/5.2.1-
> > > > 2.0502.9041.11.6.ari/sbin:/opt/cray/alps/5.2.1-2.0502.
> > > > 9041.11.6.ari/bin:/opt/cray/dvs/2.5_0.9.0-1.0502.1873.1.
> > > > 145.ari/bin:/opt/cray/xpmem/0.1-2.0502.55507.3.2.ari/bin:/
> > > > opt/cray/dmapp/7.0.1-1.0502.9501.5.219.ari/bin:/opt/cray/
> > > > pmi/5.0.8-1.0000.10843.170.1.ari/bin:/opt/cray/ugni/5.0-1.
> > > > 0502.9685.4.24.ari/bin:/opt/cray/udreg/2.3.2-1.0502.9275.
> > > > 1.12.ari/bin:/usr/people/PBS/SLB:/app/unsupported/BC:/usr/
> > > > krb5/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/
> > > > default/bin:/opt/pbs/default/bin:/opt/cray/craype/2.4.1/
> > > > bin:/opt/cray/switch/1.0-1.0502.60522.1.61.ari/bin:/opt/
> > > > cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/
> > > > 3.2.10.3/bin:/usr/local/bin:/usr/bin:/bin:/u
> > > > sr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/
> > > > bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/sbin:/usr/sbin:/usr/
> > > > lib/qt3/bin:/opt/cray/bin:/usr/brl/bin:/usr/brl/bin:/usr/
> > > >
brl/bin:/opt/cray/netcdf/4.3.2/INTEL/140/bin:/p/home/jraby/Scripts:.
> > > > )
> > > > excalibur:~jraby
> > > >
> > > > Is this something I could download and compile the same way
I've
> > > > been doing with the other libraries? If so what is the
download
> > > > site your recommend for obtaining the 0.30.0 or later version?
> > > >
> > > > Thanks.
> > > >
> > > > R/
> > > > John
> > > >
> > > > -----Original Message-----
> > > > From: Julie Prestopnik via RT
> > > > [Caution-Caution-Caution-Caution-mailto:met_help at ucar.edu]
> > > > Sent: Tuesday, January 17, 2017 1:42 PM
> > > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > > <john.w.raby2.civ at mail.mil>
> > > > Subject: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > > >
> > > > All active links contained in this email were disabled.
Please
> > > > verify the identity of the sender, and confirm the
authenticity
> > > > of all links contained within the message prior to copying and
> > > > pasting the address to a Web browser.
> > > >
> > > >
> > > >
> > > >
> > > > ----
> > > >
> > > > Hi John. It looks like you need a newer version of pixman.
The
> > > > log file shows the installed pixman version is 0.24.4 and
cairo
> > > > requires
> > > > 0.30.0 or later version. We are using version 0.32.6.
> > > >
> > > > The log file complains two issues:
> > > > 1. missing header files (Makefile was generated with the same
> > > > errors that we have seen) 2. pixman version <== "Requested
> > > > 'pixman-1 >= 0.30.0' but version of Pixman is 0.24.4"
> > > >
> > > > If you want to check your pixman version:
> > > >
> > > > 1: Get the library path from the following command (check
path for
> > > > ldconfig if get "command not found" - may be in /sbin/)
> > > > ldconfig -p | grep libpixman
> > > >
> > > > 2. Check the version number by getting real file name from
above.
> > For
> > > > example,
> > > > ls -l /usr/lib64/libpixman*
> > > >
> > > > I hope this helps!
> > > >
> > > > Julie
> > > >
> > > >
> > > >
> > > >
> > > >
> > > > On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via RT
<
> > > > met_help at ucar.edu> wrote:
> > > >
> > > > >
> > > > > Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> > > > > Transaction: Ticket created by john.w.raby2.civ at mail.mil
> > > > > Queue: met_help
> > > > > Subject: Problem compiling cairo library for MET V5.2
> > > (UNCLASSIFIED)
> > > > > Owner: Nobody
> > > > > Requestors: john.w.raby2.civ at mail.mil
> > > > > Status: new
> > > > > Ticket <Caution-Caution-Caution-Caution-Caution-url:
> > > > > Caution-Caution-Caution-Caution-Caution-https://rt.rap.ucar.
> edu/rt/Ticket/Display.
> > > > > html?id=79
> > > > > 175 >
> > > > >
> > > > >
> > > > > CLASSIFICATION: UNCLASSIFIED
> > > > >
> > > > > I followed the instructions in the V5.2 tutorial and
> > > > > downloaded/unpacked the tarball named "cairo-1.14.6.tar.xz"
> > > > > from
> > site:
> > > > > Caution-Caution-Caution-Caution-Caution-
https://cairographics.
> > > > > org/releas
> > > > > es/
> > > > >
> > > > > After unpacking I have a configure script, but not a
makefile
> script.
> > > > >
> > > > > I ran ./configure --prefix=/p/home/jraby/cairo/cairo-1.14.6,
> > > > > but still did not see a makefile script.
> > > > >
> > > > > The attached log file documents several errors and a
> > > > > catastrophic failure as
> > > > > follows:
> > > > >
> > > > > "conftest.c(52): catastrophic error: cannot open source file
> > > > > "minix/config.h"
> > > > > #include <minix/config.h>"
> > > > >
> > > > > I don't see the sub directory "minix" in the install dir.
> > > > >
> > > > > Judging from the number and severity of the errors, it seems
> > > > > like I have a problem with the tarball.
> > > > >
> > > > > I repeated the above starting with a new download of the
same
> > > > > tarball and the result was the same.
> > > > >
> > > > > Is it possible I have the wrong tarball? If so, do you have
> > > > > another download site to acquire this tarball or a
> > > > > recommendation of a more updated version that's been tested?
> > > > >
> > > > > Do you have any suggestions on a way to resolve this issue?
> > > > >
> > > > > Thanks.
> > > > >
> > > > > R/
> > > > > John
> > > > >
> > > > > Mr John W. Raby, Meteorologist U.S. Army Research Laboratory
> > > > > White Sands Missile Range, NM 88002
> > > > > (575) 678-2004 DSN 258-2004
> > > > > FAX (575) 678-1230 DSN 258-1230
> > > > > Email: john.w.raby2.civ at mail.mil
> > > > >
> > > > >
> > > > >
> > > > > CLASSIFICATION: UNCLASSIFIED
> > > > >
> > > > >
> > > >
> > > >
> > > > --
> > > > Julie Prestopnik
> > > > National Center for Atmospheric Research Research Applications
> > > > Laboratory
> > > > Phone: 303.497.8399
> > > > Email: jpresto at ucar.edu
> > > >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > >
> > >
> > >
> > > --
> > > Julie Prestopnik
> > > National Center for Atmospheric Research Research Applications
> > > Laboratory
> > > Phone: 303.497.8399
> > > Email: jpresto at ucar.edu
> > >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > >
> >
> >
> > --
> > Julie Prestopnik
> > National Center for Atmospheric Research Research Applications
> > Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> >
>
>
> --
> Julie Prestopnik
> National Center for Atmospheric Research Research Applications
> Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research Research Applications
Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
CLASSIFICATION: UNCLASSIFIED
------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Raby, John W USA CIV
Time: Wed Jan 18 09:22:37 2017
CLASSIFICATION: UNCLASSIFIED
Julie -
Thanks for showing me the commands you did yesterday. This has shown
that
there may be existing libraries on the system which may provide the
required
ones for MET V5.2. I gather that something (my profile?) sets this
path as the
default location for such libraries based on the observation we made
yesterday
that Cairo attempted to find pixman at /usr/lib64/. I think it might
be wise
to at least see which of the required libraries for MET V5.2 may be at
locations on the system before contacting my system admin to advise on
which
will require upgrade to meet the MET requirements. I'm also
considering
learning how to modify the default paths myself to point to the
libraries I've
compiled over the past couple of weeks, to be prepared in case system
admin
can't help with this.
Regards each of the required libraries that I've already compiled, if
I look
in the install directory, where would I need to look and what would I
need to
look for to identify the required library/version? What attribute in
the
filename would distinguish that version (built with Intel compiler)
could I
key on so that when I look on the system I could spot it from all the
other
versions for other compilers? For example, I navigated to the NetCDF
version I
compiled at /p/home/jraby/NetCDF/netcdf-4.1.1/lib and looked at the
contents
which are as follows:
excalibur:~jraby/NetCDF/netcdf-4.1.1/lib
> ls
libnetcdf.a libnetcdf.la* libnetcdf_c++.a libnetcdf_c++.la*
pkgconfig/
The version of these files is 4.4.1 based on the name of the install
directory
"netcdf-4.1.1".
Then, while there, I executed the command you showed me,
/sbin/ldconfig -p |
grep netcdf to show the available compiled versions of libnetcdf which
are
present on the system. See the following subset of that list which
have the
string "intel" in the name.
libnetcdff_parallel_intel.so.6 (libc6,x86-64) =>
/opt/cray/lib64/libnetcdff_parallel_intel.so.6
libnetcdff_parallel_intel.so.mpich31.5 (libc6,x86-64) =>
/opt/cray/lib64/libnetcdff_parallel_intel.so.mpich31.5
libnetcdff_intel.so.6 (libc6,x86-64) =>
/opt/cray/lib64/libnetcdff_intel.so.6
libnetcdff_intel.so.5 (libc6,x86-64) =>
/opt/cray/lib64/libnetcdff_intel.so.5
libnetcdf_parallel_intel.so.11 (libc6,x86-64) =>
/opt/cray/lib64/libnetcdf_parallel_intel.so.11
libnetcdf_parallel_intel.so.mpich31.7 (libc6,x86-64) =>
/opt/cray/lib64/libnetcdf_parallel_intel.so.mpich31.7
libnetcdf_intel.so.11 (libc6,x86-64) =>
/opt/cray/lib64/libnetcdf_intel.so.11
libnetcdf_intel.so.7 (libc6,x86-64) =>
/opt/cray/lib64/libnetcdf_intel.so.7
libnetcdf_c++4_parallel_intel.so.mpich31.1 (libc6,x86-64) =>
/opt/cray/lib64/libnetcdf_c++4_parallel_intel.so.mpich31.1
libnetcdf_c++4_intel.so.1 (libc6,x86-64) =>
/opt/cray/lib64/libnetcdf_c++4_intel.so.1
All the others listed are compiled ( I assume) with pgi, gnu, cray,
etc by
virtue of the presence of a string which contains those characters.
My thought is that I have to find the intel version listed above which
is
appropriate for my situation and then use the other command you
provided
yesterday to determine the version and then compare that with my
compiled
version to see if the system has a version at least as new at mine.
For example, using the first intel version listed above:
libnetcdff_parallel_intel.so.6 (libc6,x86-64) =>
/opt/cray/lib64/libnetcdff_parallel_intel.so.6
ls -l /opt/cray/lib64/libnetcdff_parallel_intel.so.6 which produced
the
following:
lrwxrwxrwx 1 root root 83 Nov 11 2015
/opt/cray/lib64/libnetcdff_parallel_intel.so.6 ->
/opt/cray/netcdf-
hdf5parallel/4.3.3.1/INTEL/14.0/lib/libnetcdff_parallel_intel.so.6*
which shows the version is 4.3.3.1? Is this the version number I'm
looking
for?
Is there any way to tell from the list of intel netcdf versions above
which
ones I should choose to further determine the versions for comparison
with
mine (4.4.1)?
Thanks.
R/
John
-----Original Message-----
From: Julie Prestopnik via RT [mailto:met_help at ucar.edu]
Sent: Tuesday, January 17, 2017 3:20 PM
To: Raby, John W CIV USARMY RDECOM ARL (US)
<john.w.raby2.civ at mail.mil>
Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
compiling
cairo library for MET V5.2 (UNCLASSIFIED)
All active links contained in this email were disabled. Please verify
the
identity of the sender, and confirm the authenticity of all links
contained
within the message prior to copying and pasting the address to a Web
browser.
----
Yes, that sounds reasonable. I do not think that configure will find
the
files automatically though, unless they're installed where expected.
You'll likely need to set LDFLAGS and CPPFLAGS to point to the
necessary
library files and include files, respectively, either as environment
variables
or perhaps configure would accept the following:
./configure LDFLAGS=-L/shared/lib CPPFLAGS=-I/shared/include ...other
options...
Again this is outside of our expertise. You might consider consulting
with
your system administrator regarding this issue. I hope this helps.
Julie
On Tue, Jan 17, 2017 at 3:11 PM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> <Caution-url:
> Caution-https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
> CLASSIFICATION: UNCLASSIFIED
>
> Julie -
>
> I'll give it a try and let you know the results. If it's successful,
> then I guess I would need to rerun the ./configure for Cairo, but
> somehow point it to access my compiled version of libpixman. Does
this
> seem reasonable to you?
> Maybe the configure will find it automatically? I'm not sure how
that
> works.
>
> R/
> John
>
> -----Original Message-----
> From: Julie Prestopnik via RT [Caution-mailto:met_help at ucar.edu]
> Sent: Tuesday, January 17, 2017 3:02 PM
> To: Raby, John W CIV USARMY RDECOM ARL (US)
> <john.w.raby2.civ at mail.mil>
> Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> compiling cairo library for MET V5.2 (UNCLASSIFIED)
>
> All active links contained in this email were disabled. Please
verify
> the identity of the sender, and confirm the authenticity of all
links
> contained within the message prior to copying and pasting the
address
> to a Web browser.
>
>
>
>
> ----
>
> Hi John.
>
> This is outside my area of expertise, but I don't think it would
hurt
> to try it.
>
> Julie
>
> On Tue, Jan 17, 2017 at 2:55 PM, Raby, John W USA CIV via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <Caution-Caution-url:
> > Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79
> > 175 >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> > I see the following:
> >
> > Caution-Caution-https://cairographics.org/releases/pixman-
0.32.6.tar
> > .gz
> >
> > Could I just compile it myself using similar commands as I've used
> > for the other libraries?
> >
> > R/
> > John
> >
> >
> > -----Original Message-----
> > From: Julie Prestopnik via RT
> > [Caution-Caution-mailto:met_help at ucar.edu]
> > Sent: Tuesday, January 17, 2017 2:47 PM
> > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > <john.w.raby2.civ at mail.mil>
> > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> >
> > All active links contained in this email were disabled. Please
> > verify the identity of the sender, and confirm the authenticity of
> > all links contained within the message prior to copying and
pasting
> > the address to a Web browser.
> >
> >
> >
> >
> > ----
> >
> > Hi John.
> >
> > "I didn't compile libpixman myself, so it must have been compiled
as
> > part of the overall system by the administrators."
> >
> > Yes, I suspect that is the case. I don't have any experience with
> > pixman either. I hope your administrators will be able to help.
> >
> > Julie
> >
> > On Tue, Jan 17, 2017 at 2:34 PM, Raby, John W USA CIV via RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > <Caution-Caution-Caution-url:
> > > Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > html?id=79
> > > 175 >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > > Julie -
> > >
> > > You are correct. Thanks for catching it so quickly. See the
following:
> > >
> > > excalibur:~jraby/cairo
> > > > /sbin/ldconfig -p | grep libpixman
> > > libpixman-1.so.0 (libc6,x86-64) => /usr/lib64/libpixman-
1.so.0
> > > libpixman-1.so.0 (libc6) => /usr/lib/libpixman-1.so.0
> > > libpixman-1.so (libc6,x86-64) => /usr/lib64/libpixman-
1.so
> > > excalibur:~jraby/cairo
> > >
> > > I used the other command (ls -l) to find out the version:
> > >
> > > > ls -l /usr/lib64/libpixman-1.so
> > > lrwxrwxrwx 1 root root 21 Apr 7 2015 /usr/lib64/libpixman-1.so
> > > ->
> > > libpixman-1.so.0.24.4*
> > > excalibur:~jraby/cairo
> > > > ls -l /usr/lib/libpixman-1.so.0
> > > lrwxrwxrwx 1 root root 21 Jan 29 2015 /usr/lib/libpixman-1.so.0
> > > ->
> > > libpixman-1.so.0.24.4*
> > > excalibur:~jraby/cairo
> > >
> > > This confirms what was noted in the log file as you pointed out.
> > >
> > > I didn't compile libpixman myself, so it must have been compiled
> > > as part of the overall system by the administrators.
> > >
> > > R/
> > > John
> > >
> > > -----Original Message-----
> > > From: Julie Prestopnik via RT
> > > [Caution-Caution-Caution-mailto:met_help at ucar.edu]
> > > Sent: Tuesday, January 17, 2017 2:19 PM
> > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > <john.w.raby2.civ at mail.mil>
> > > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
Problem
> > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > >
> > > All active links contained in this email were disabled. Please
> > > verify the identity of the sender, and confirm the authenticity
of
> > > all links contained within the message prior to copying and
> > > pasting the address to a Web browser.
> > >
> > >
> > >
> > >
> > > ----
> > >
> > > Hi John.
> > >
> > > It looks like you have "idconfig" note the "i" (lower case i),
but
> > > it should be "l" (lower case l).
> > >
> > > Try copying and pasting this to see if it lives in /sbin:
> > >
> > > ls /sbin/ldconfig
> > >
> > > I hope that helps!
> > >
> > > Julie
> > >
> > > On Tue, Jan 17, 2017 at 1:58 PM, Raby, John W USA CIV via RT <
> > > met_help at ucar.edu> wrote:
> > >
> > > >
> > > > <Caution-Caution-Caution-Caution-url:
> > > > Caution-Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > > html?id=79
> > > > 175 >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > > Julie -
> > > >
> > > > I'm running into a brick wall trying to locate pixman on my
system.
> > > > See the following responses when attempting to use your
> > > > suggested
> > > command:
> > > >
> > > > excalibur:~jraby
> > > > > idconfig -p | grep libpixman
> > > > -bash: idconfig: command not found excalibur:~jraby
> > > > > /sbin/idconfig -p | grep libpixman
> > > > -bash: /sbin/idconfig: No such file or directory
> > > > excalibur:~jraby
> > > > > idconfig
> > > > If 'idconfig' is not a typo you can run the following command
to
> > > > lookup the package that contains the binary:
> > > > command-not-found idconfig
> > > > -bash: idconfig: command not found excalibur:~jraby
> > > > > command-not-found idconfig
> > > > excalibur:~jraby
> > > > > which libpixman
> > > > which: no libpixman in
> > > > (/opt/intel/compilers_and_libraries_2016.0.109/linux/
> > > > bin/intel64:/opt/intel/compilers_and_libraries_2016.
> > > > 0.109/linux/mpi/intel64/bin:/opt/intel/debugger_2016/gdb/
> > > > intel64_mic/bin:/opt/cray/hdf5/1.8.13/bin:/opt/cray/
> > > > netcdf/4.3.2/bin:/opt/cray/mpt/7.1.0/gni/bin:/opt/cray/
> > > > rca/1.0.0-2.0502.53711.3.127.ari/bin:/opt/cray/alps/5.2.1-
> > > > 2.0502.9041.11.6.ari/sbin:/opt/cray/alps/5.2.1-2.0502.
> > > > 9041.11.6.ari/bin:/opt/cray/dvs/2.5_0.9.0-1.0502.1873.1.
> > > > 145.ari/bin:/opt/cray/xpmem/0.1-2.0502.55507.3.2.ari/bin:/
> > > > opt/cray/dmapp/7.0.1-1.0502.9501.5.219.ari/bin:/opt/cray/
> > > > pmi/5.0.8-1.0000.10843.170.1.ari/bin:/opt/cray/ugni/5.0-1.
> > > > 0502.9685.4.24.ari/bin:/opt/cray/udreg/2.3.2-1.0502.9275.
> > > > 1.12.ari/bin:/usr/people/PBS/SLB:/app/unsupported/BC:/usr/
> > > > krb5/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/
> > > > default/bin:/opt/pbs/default/bin:/opt/cray/craype/2.4.1/
> > > > bin:/opt/cray/switch/1.0-1.0502.60522.1.61.ari/bin:/opt/
> > > > cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/
> > > > 3.2.10.3/bin:/usr/local/bin:/usr/bin:/bin:/u
> > > > sr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/
> > > > bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/sbin:/usr/sbin:/usr/
> > > > lib/qt3/bin:/opt/cray/bin:/usr/brl/bin:/usr/brl/bin:/usr/
> > > >
brl/bin:/opt/cray/netcdf/4.3.2/INTEL/140/bin:/p/home/jraby/Scripts:.
> > > > )
> > > > excalibur:~jraby
> > > >
> > > > Is this something I could download and compile the same way
I've
> > > > been doing with the other libraries? If so what is the
download
> > > > site your recommend for obtaining the 0.30.0 or later version?
> > > >
> > > > Thanks.
> > > >
> > > > R/
> > > > John
> > > >
> > > > -----Original Message-----
> > > > From: Julie Prestopnik via RT
> > > > [Caution-Caution-Caution-Caution-mailto:met_help at ucar.edu]
> > > > Sent: Tuesday, January 17, 2017 1:42 PM
> > > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > > <john.w.raby2.civ at mail.mil>
> > > > Subject: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > > >
> > > > All active links contained in this email were disabled.
Please
> > > > verify the identity of the sender, and confirm the
authenticity
> > > > of all links contained within the message prior to copying and
> > > > pasting the address to a Web browser.
> > > >
> > > >
> > > >
> > > >
> > > > ----
> > > >
> > > > Hi John. It looks like you need a newer version of pixman.
The
> > > > log file shows the installed pixman version is 0.24.4 and
cairo
> > > > requires
> > > > 0.30.0 or later version. We are using version 0.32.6.
> > > >
> > > > The log file complains two issues:
> > > > 1. missing header files (Makefile was generated with the same
> > > > errors that we have seen) 2. pixman version <== "Requested
> > > > 'pixman-1 >= 0.30.0' but version of Pixman is 0.24.4"
> > > >
> > > > If you want to check your pixman version:
> > > >
> > > > 1: Get the library path from the following command (check
path for
> > > > ldconfig if get "command not found" - may be in /sbin/)
> > > > ldconfig -p | grep libpixman
> > > >
> > > > 2. Check the version number by getting real file name from
above.
> > For
> > > > example,
> > > > ls -l /usr/lib64/libpixman*
> > > >
> > > > I hope this helps!
> > > >
> > > > Julie
> > > >
> > > >
> > > >
> > > >
> > > >
> > > > On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via RT
<
> > > > met_help at ucar.edu> wrote:
> > > >
> > > > >
> > > > > Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> > > > > Transaction: Ticket created by john.w.raby2.civ at mail.mil
> > > > > Queue: met_help
> > > > > Subject: Problem compiling cairo library for MET V5.2
> > > (UNCLASSIFIED)
> > > > > Owner: Nobody
> > > > > Requestors: john.w.raby2.civ at mail.mil
> > > > > Status: new
> > > > > Ticket <Caution-Caution-Caution-Caution-Caution-url:
> > > > > Caution-Caution-Caution-Caution-Caution-https://rt.rap.ucar.
> edu/rt/Ticket/Display.
> > > > > html?id=79
> > > > > 175 >
> > > > >
> > > > >
> > > > > CLASSIFICATION: UNCLASSIFIED
> > > > >
> > > > > I followed the instructions in the V5.2 tutorial and
> > > > > downloaded/unpacked the tarball named "cairo-1.14.6.tar.xz"
> > > > > from
> > site:
> > > > > Caution-Caution-Caution-Caution-Caution-
https://cairographics.
> > > > > org/releas
> > > > > es/
> > > > >
> > > > > After unpacking I have a configure script, but not a
makefile
> script.
> > > > >
> > > > > I ran ./configure --prefix=/p/home/jraby/cairo/cairo-1.14.6,
> > > > > but still did not see a makefile script.
> > > > >
> > > > > The attached log file documents several errors and a
> > > > > catastrophic failure as
> > > > > follows:
> > > > >
> > > > > "conftest.c(52): catastrophic error: cannot open source file
> > > > > "minix/config.h"
> > > > > #include <minix/config.h>"
> > > > >
> > > > > I don't see the sub directory "minix" in the install dir.
> > > > >
> > > > > Judging from the number and severity of the errors, it seems
> > > > > like I have a problem with the tarball.
> > > > >
> > > > > I repeated the above starting with a new download of the
same
> > > > > tarball and the result was the same.
> > > > >
> > > > > Is it possible I have the wrong tarball? If so, do you have
> > > > > another download site to acquire this tarball or a
> > > > > recommendation of a more updated version that's been tested?
> > > > >
> > > > > Do you have any suggestions on a way to resolve this issue?
> > > > >
> > > > > Thanks.
> > > > >
> > > > > R/
> > > > > John
> > > > >
> > > > > Mr John W. Raby, Meteorologist U.S. Army Research Laboratory
> > > > > White Sands Missile Range, NM 88002
> > > > > (575) 678-2004 DSN 258-2004
> > > > > FAX (575) 678-1230 DSN 258-1230
> > > > > Email: john.w.raby2.civ at mail.mil
> > > > >
> > > > >
> > > > >
> > > > > CLASSIFICATION: UNCLASSIFIED
> > > > >
> > > > >
> > > >
> > > >
> > > > --
> > > > Julie Prestopnik
> > > > National Center for Atmospheric Research Research Applications
> > > > Laboratory
> > > > Phone: 303.497.8399
> > > > Email: jpresto at ucar.edu
> > > >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > >
> > >
> > >
> > > --
> > > Julie Prestopnik
> > > National Center for Atmospheric Research Research Applications
> > > Laboratory
> > > Phone: 303.497.8399
> > > Email: jpresto at ucar.edu
> > >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > >
> >
> >
> > --
> > Julie Prestopnik
> > National Center for Atmospheric Research Research Applications
> > Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> >
>
>
> --
> Julie Prestopnik
> National Center for Atmospheric Research Research Applications
> Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research Research Applications
Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
CLASSIFICATION: UNCLASSIFIED
------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Julie Prestopnik
Time: Wed Jan 18 09:47:13 2017
Hi John. I think you shouldn't have to dig in at this level. It
sounds
like you were making good progress installing the third party
libraries,
until you hit the problem with the version of pixman for Cairo. Cairo
is
only required for using the MODE graphics tool which has limited
utility.
I would suggest moving on and trying to build MET excluding "
*--enable-mode_graphics*" from the call to configure, so that you
don't
build the MODE graphics tool. Please let us know how that goes.
I hope that helps!
Julie
On Wed, Jan 18, 2017 at 9:22 AM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
> CLASSIFICATION: UNCLASSIFIED
>
> Julie -
>
> Thanks for showing me the commands you did yesterday. This has shown
that
> there may be existing libraries on the system which may provide the
> required
> ones for MET V5.2. I gather that something (my profile?) sets this
path as
> the
> default location for such libraries based on the observation we made
> yesterday
> that Cairo attempted to find pixman at /usr/lib64/. I think it might
be
> wise
> to at least see which of the required libraries for MET V5.2 may be
at
> locations on the system before contacting my system admin to advise
on
> which
> will require upgrade to meet the MET requirements. I'm also
considering
> learning how to modify the default paths myself to point to the
libraries
> I've
> compiled over the past couple of weeks, to be prepared in case
system admin
> can't help with this.
>
> Regards each of the required libraries that I've already compiled,
if I
> look
> in the install directory, where would I need to look and what would
I need
> to
> look for to identify the required library/version? What attribute in
the
> filename would distinguish that version (built with Intel compiler)
could I
> key on so that when I look on the system I could spot it from all
the other
> versions for other compilers? For example, I navigated to the NetCDF
> version I
> compiled at /p/home/jraby/NetCDF/netcdf-4.1.1/lib and looked at the
> contents
> which are as follows:
>
> excalibur:~jraby/NetCDF/netcdf-4.1.1/lib
> > ls
> libnetcdf.a libnetcdf.la* libnetcdf_c++.a libnetcdf_c++.la*
pkgconfig/
>
> The version of these files is 4.4.1 based on the name of the install
> directory
> "netcdf-4.1.1".
>
> Then, while there, I executed the command you showed me,
/sbin/ldconfig -p
> |
> grep netcdf to show the available compiled versions of libnetcdf
which are
> present on the system. See the following subset of that list which
have the
> string "intel" in the name.
>
> libnetcdff_parallel_intel.so.6 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdff_parallel_intel.so.6
> libnetcdff_parallel_intel.so.mpich31.5 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdff_parallel_intel.so.mpich31.5
> libnetcdff_intel.so.6 (libc6,x86-64) => /opt/cray/lib64/libnetcdff_
> intel.so.6
> libnetcdff_intel.so.5 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdff_intel.so.5
> libnetcdf_parallel_intel.so.11 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdf_parallel_intel.so.11
> libnetcdf_parallel_intel.so.mpich31.7 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdf_parallel_intel.so.mpich31.7
> libnetcdf_intel.so.11 (libc6,x86-64) => /opt/cray/lib64/libnetcdf_
> intel.so.11
> libnetcdf_intel.so.7 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdf_intel.so.7
> libnetcdf_c++4_parallel_intel.so.mpich31.1 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdf_c++4_parallel_intel.so.mpich31.1
> libnetcdf_c++4_intel.so.1 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdf_c++4_intel.so.1
>
> All the others listed are compiled ( I assume) with pgi, gnu, cray,
etc by
> virtue of the presence of a string which contains those characters.
>
> My thought is that I have to find the intel version listed above
which is
> appropriate for my situation and then use the other command you
provided
> yesterday to determine the version and then compare that with my
compiled
> version to see if the system has a version at least as new at mine.
>
> For example, using the first intel version listed above:
> libnetcdff_parallel_intel.so.6 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdff_parallel_intel.so.6
>
> ls -l /opt/cray/lib64/libnetcdff_parallel_intel.so.6 which produced
the
> following:
>
> lrwxrwxrwx 1 root root 83 Nov 11 2015
> /opt/cray/lib64/libnetcdff_parallel_intel.so.6 ->
> /opt/cray/netcdf-hdf5parallel/4.3.3.1/INTEL/14.0/lib/
> libnetcdff_parallel_intel.so.6*
>
> which shows the version is 4.3.3.1? Is this the version number I'm
looking
> for?
>
> Is there any way to tell from the list of intel netcdf versions
above which
> ones I should choose to further determine the versions for
comparison with
> mine (4.4.1)?
>
> Thanks.
>
> R/
> John
>
>
>
>
>
>
>
>
>
>
>
> -----Original Message-----
> From: Julie Prestopnik via RT [mailto:met_help at ucar.edu]
> Sent: Tuesday, January 17, 2017 3:20 PM
> To: Raby, John W CIV USARMY RDECOM ARL (US)
<john.w.raby2.civ at mail.mil>
> Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> compiling
> cairo library for MET V5.2 (UNCLASSIFIED)
>
> All active links contained in this email were disabled. Please
verify the
> identity of the sender, and confirm the authenticity of all links
contained
> within the message prior to copying and pasting the address to a Web
> browser.
>
>
>
>
> ----
>
> Yes, that sounds reasonable. I do not think that configure will
find the
> files automatically though, unless they're installed where expected.
> You'll likely need to set LDFLAGS and CPPFLAGS to point to the
necessary
> library files and include files, respectively, either as environment
> variables
> or perhaps configure would accept the following:
>
> ./configure LDFLAGS=-L/shared/lib CPPFLAGS=-I/shared/include
...other
> options...
>
> Again this is outside of our expertise. You might consider
consulting with
> your system administrator regarding this issue. I hope this helps.
>
> Julie
>
> On Tue, Jan 17, 2017 at 3:11 PM, Raby, John W USA CIV via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <Caution-url:
> > Caution-https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> > Julie -
> >
> > I'll give it a try and let you know the results. If it's
successful,
> > then I guess I would need to rerun the ./configure for Cairo, but
> > somehow point it to access my compiled version of libpixman. Does
this
> > seem reasonable to you?
> > Maybe the configure will find it automatically? I'm not sure how
that
> > works.
> >
> > R/
> > John
> >
> > -----Original Message-----
> > From: Julie Prestopnik via RT [Caution-mailto:met_help at ucar.edu]
> > Sent: Tuesday, January 17, 2017 3:02 PM
> > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > <john.w.raby2.civ at mail.mil>
> > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> >
> > All active links contained in this email were disabled. Please
verify
> > the identity of the sender, and confirm the authenticity of all
links
> > contained within the message prior to copying and pasting the
address
> > to a Web browser.
> >
> >
> >
> >
> > ----
> >
> > Hi John.
> >
> > This is outside my area of expertise, but I don't think it would
hurt
> > to try it.
> >
> > Julie
> >
> > On Tue, Jan 17, 2017 at 2:55 PM, Raby, John W USA CIV via RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > <Caution-Caution-url:
> > > Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79
> > > 175 >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > > I see the following:
> > >
> > > Caution-Caution-https://cairographics.org/releases/pixman-
0.32.6.tar
> > > .gz
> > >
> > > Could I just compile it myself using similar commands as I've
used
> > > for the other libraries?
> > >
> > > R/
> > > John
> > >
> > >
> > > -----Original Message-----
> > > From: Julie Prestopnik via RT
> > > [Caution-Caution-mailto:met_help at ucar.edu]
> > > Sent: Tuesday, January 17, 2017 2:47 PM
> > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > <john.w.raby2.civ at mail.mil>
> > > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
Problem
> > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > >
> > > All active links contained in this email were disabled. Please
> > > verify the identity of the sender, and confirm the authenticity
of
> > > all links contained within the message prior to copying and
pasting
> > > the address to a Web browser.
> > >
> > >
> > >
> > >
> > > ----
> > >
> > > Hi John.
> > >
> > > "I didn't compile libpixman myself, so it must have been
compiled as
> > > part of the overall system by the administrators."
> > >
> > > Yes, I suspect that is the case. I don't have any experience
with
> > > pixman either. I hope your administrators will be able to help.
> > >
> > > Julie
> > >
> > > On Tue, Jan 17, 2017 at 2:34 PM, Raby, John W USA CIV via RT <
> > > met_help at ucar.edu> wrote:
> > >
> > > >
> > > > <Caution-Caution-Caution-url:
> > > > Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > > html?id=79
> > > > 175 >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > > Julie -
> > > >
> > > > You are correct. Thanks for catching it so quickly. See the
> following:
> > > >
> > > > excalibur:~jraby/cairo
> > > > > /sbin/ldconfig -p | grep libpixman
> > > > libpixman-1.so.0 (libc6,x86-64) =>
> /usr/lib64/libpixman-1.so.0
> > > > libpixman-1.so.0 (libc6) => /usr/lib/libpixman-1.so.0
> > > > libpixman-1.so (libc6,x86-64) => /usr/lib64/libpixman-
1.so
> > > > excalibur:~jraby/cairo
> > > >
> > > > I used the other command (ls -l) to find out the version:
> > > >
> > > > > ls -l /usr/lib64/libpixman-1.so
> > > > lrwxrwxrwx 1 root root 21 Apr 7 2015 /usr/lib64/libpixman-
1.so
> > > > ->
> > > > libpixman-1.so.0.24.4*
> > > > excalibur:~jraby/cairo
> > > > > ls -l /usr/lib/libpixman-1.so.0
> > > > lrwxrwxrwx 1 root root 21 Jan 29 2015 /usr/lib/libpixman-
1.so.0
> > > > ->
> > > > libpixman-1.so.0.24.4*
> > > > excalibur:~jraby/cairo
> > > >
> > > > This confirms what was noted in the log file as you pointed
out.
> > > >
> > > > I didn't compile libpixman myself, so it must have been
compiled
> > > > as part of the overall system by the administrators.
> > > >
> > > > R/
> > > > John
> > > >
> > > > -----Original Message-----
> > > > From: Julie Prestopnik via RT
> > > > [Caution-Caution-Caution-mailto:met_help at ucar.edu]
> > > > Sent: Tuesday, January 17, 2017 2:19 PM
> > > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > > <john.w.raby2.civ at mail.mil>
> > > > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
Problem
> > > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > > >
> > > > All active links contained in this email were disabled.
Please
> > > > verify the identity of the sender, and confirm the
authenticity of
> > > > all links contained within the message prior to copying and
> > > > pasting the address to a Web browser.
> > > >
> > > >
> > > >
> > > >
> > > > ----
> > > >
> > > > Hi John.
> > > >
> > > > It looks like you have "idconfig" note the "i" (lower case i),
but
> > > > it should be "l" (lower case l).
> > > >
> > > > Try copying and pasting this to see if it lives in /sbin:
> > > >
> > > > ls /sbin/ldconfig
> > > >
> > > > I hope that helps!
> > > >
> > > > Julie
> > > >
> > > > On Tue, Jan 17, 2017 at 1:58 PM, Raby, John W USA CIV via RT <
> > > > met_help at ucar.edu> wrote:
> > > >
> > > > >
> > > > > <Caution-Caution-Caution-Caution-url:
> > > > > Caution-Caution-Caution-Caution-https://rt.rap.ucar.
> edu/rt/Ticket/Display.
> > > > > html?id=79
> > > > > 175 >
> > > > >
> > > > > CLASSIFICATION: UNCLASSIFIED
> > > > >
> > > > > Julie -
> > > > >
> > > > > I'm running into a brick wall trying to locate pixman on my
system.
> > > > > See the following responses when attempting to use your
> > > > > suggested
> > > > command:
> > > > >
> > > > > excalibur:~jraby
> > > > > > idconfig -p | grep libpixman
> > > > > -bash: idconfig: command not found excalibur:~jraby
> > > > > > /sbin/idconfig -p | grep libpixman
> > > > > -bash: /sbin/idconfig: No such file or directory
> > > > > excalibur:~jraby
> > > > > > idconfig
> > > > > If 'idconfig' is not a typo you can run the following
command to
> > > > > lookup the package that contains the binary:
> > > > > command-not-found idconfig
> > > > > -bash: idconfig: command not found excalibur:~jraby
> > > > > > command-not-found idconfig
> > > > > excalibur:~jraby
> > > > > > which libpixman
> > > > > which: no libpixman in
> > > > > (/opt/intel/compilers_and_libraries_2016.0.109/linux/
> > > > > bin/intel64:/opt/intel/compilers_and_libraries_2016.
> > > > > 0.109/linux/mpi/intel64/bin:/opt/intel/debugger_2016/gdb/
> > > > > intel64_mic/bin:/opt/cray/hdf5/1.8.13/bin:/opt/cray/
> > > > > netcdf/4.3.2/bin:/opt/cray/mpt/7.1.0/gni/bin:/opt/cray/
> > > > > rca/1.0.0-2.0502.53711.3.127.ari/bin:/opt/cray/alps/5.2.1-
> > > > > 2.0502.9041.11.6.ari/sbin:/opt/cray/alps/5.2.1-2.0502.
> > > > > 9041.11.6.ari/bin:/opt/cray/dvs/2.5_0.9.0-1.0502.1873.1.
> > > > > 145.ari/bin:/opt/cray/xpmem/0.1-2.0502.55507.3.2.ari/bin:/
> > > > > opt/cray/dmapp/7.0.1-1.0502.9501.5.219.ari/bin:/opt/cray/
> > > > > pmi/5.0.8-1.0000.10843.170.1.ari/bin:/opt/cray/ugni/5.0-1.
> > > > > 0502.9685.4.24.ari/bin:/opt/cray/udreg/2.3.2-1.0502.9275.
> > > > > 1.12.ari/bin:/usr/people/PBS/SLB:/app/unsupported/BC:/usr/
> > > > > krb5/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/
> > > > > default/bin:/opt/pbs/default/bin:/opt/cray/craype/2.4.1/
> > > > > bin:/opt/cray/switch/1.0-1.0502.60522.1.61.ari/bin:/opt/
> > > > > cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/
> > > > > 3.2.10.3/bin:/usr/local/bin:/usr/bin:/bin:/u
> > > > > sr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/
> > > > > bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/sbin:/usr/sbin:/usr/
> > > > > lib/qt3/bin:/opt/cray/bin:/usr/brl/bin:/usr/brl/bin:/usr/
> > > > > brl/bin:/opt/cray/netcdf/4.3.2/INTEL/140/bin:/p/home/jraby/
> Scripts:.
> > > > > )
> > > > > excalibur:~jraby
> > > > >
> > > > > Is this something I could download and compile the same way
I've
> > > > > been doing with the other libraries? If so what is the
download
> > > > > site your recommend for obtaining the 0.30.0 or later
version?
> > > > >
> > > > > Thanks.
> > > > >
> > > > > R/
> > > > > John
> > > > >
> > > > > -----Original Message-----
> > > > > From: Julie Prestopnik via RT
> > > > > [Caution-Caution-Caution-Caution-mailto:met_help at ucar.edu]
> > > > > Sent: Tuesday, January 17, 2017 1:42 PM
> > > > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > > > <john.w.raby2.civ at mail.mil>
> > > > > Subject: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
Problem
> > > > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > > > >
> > > > > All active links contained in this email were disabled.
Please
> > > > > verify the identity of the sender, and confirm the
authenticity
> > > > > of all links contained within the message prior to copying
and
> > > > > pasting the address to a Web browser.
> > > > >
> > > > >
> > > > >
> > > > >
> > > > > ----
> > > > >
> > > > > Hi John. It looks like you need a newer version of pixman.
The
> > > > > log file shows the installed pixman version is 0.24.4 and
cairo
> > > > > requires
> > > > > 0.30.0 or later version. We are using version 0.32.6.
> > > > >
> > > > > The log file complains two issues:
> > > > > 1. missing header files (Makefile was generated with the
same
> > > > > errors that we have seen) 2. pixman version <== "Requested
> > > > > 'pixman-1 >= 0.30.0' but version of Pixman is 0.24.4"
> > > > >
> > > > > If you want to check your pixman version:
> > > > >
> > > > > 1: Get the library path from the following command (check
path
> for
> > > > > ldconfig if get "command not found" - may be in /sbin/)
> > > > > ldconfig -p | grep libpixman
> > > > >
> > > > > 2. Check the version number by getting real file name
from
> above.
> > > For
> > > > > example,
> > > > > ls -l /usr/lib64/libpixman*
> > > > >
> > > > > I hope this helps!
> > > > >
> > > > > Julie
> > > > >
> > > > >
> > > > >
> > > > >
> > > > >
> > > > > On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via
RT <
> > > > > met_help at ucar.edu> wrote:
> > > > >
> > > > > >
> > > > > > Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> > > > > > Transaction: Ticket created by john.w.raby2.civ at mail.mil
> > > > > > Queue: met_help
> > > > > > Subject: Problem compiling cairo library for MET V5.2
> > > > (UNCLASSIFIED)
> > > > > > Owner: Nobody
> > > > > > Requestors: john.w.raby2.civ at mail.mil
> > > > > > Status: new
> > > > > > Ticket <Caution-Caution-Caution-Caution-Caution-url:
> > > > > > Caution-Caution-Caution-Caution-Caution-
https://rt.rap.ucar.
> > edu/rt/Ticket/Display.
> > > > > > html?id=79
> > > > > > 175 >
> > > > > >
> > > > > >
> > > > > > CLASSIFICATION: UNCLASSIFIED
> > > > > >
> > > > > > I followed the instructions in the V5.2 tutorial and
> > > > > > downloaded/unpacked the tarball named "cairo-
1.14.6.tar.xz"
> > > > > > from
> > > site:
> > > > > > Caution-Caution-Caution-Caution-Caution-
https://cairographics.
> > > > > > org/releas
> > > > > > es/
> > > > > >
> > > > > > After unpacking I have a configure script, but not a
makefile
> > script.
> > > > > >
> > > > > > I ran ./configure --prefix=/p/home/jraby/cairo/cairo-
1.14.6,
> > > > > > but still did not see a makefile script.
> > > > > >
> > > > > > The attached log file documents several errors and a
> > > > > > catastrophic failure as
> > > > > > follows:
> > > > > >
> > > > > > "conftest.c(52): catastrophic error: cannot open source
file
> > > > > > "minix/config.h"
> > > > > > #include <minix/config.h>"
> > > > > >
> > > > > > I don't see the sub directory "minix" in the install dir.
> > > > > >
> > > > > > Judging from the number and severity of the errors, it
seems
> > > > > > like I have a problem with the tarball.
> > > > > >
> > > > > > I repeated the above starting with a new download of the
same
> > > > > > tarball and the result was the same.
> > > > > >
> > > > > > Is it possible I have the wrong tarball? If so, do you
have
> > > > > > another download site to acquire this tarball or a
> > > > > > recommendation of a more updated version that's been
tested?
> > > > > >
> > > > > > Do you have any suggestions on a way to resolve this
issue?
> > > > > >
> > > > > > Thanks.
> > > > > >
> > > > > > R/
> > > > > > John
> > > > > >
> > > > > > Mr John W. Raby, Meteorologist U.S. Army Research
Laboratory
> > > > > > White Sands Missile Range, NM 88002
> > > > > > (575) 678-2004 DSN 258-2004
> > > > > > FAX (575) 678-1230 DSN 258-1230
> > > > > > Email: john.w.raby2.civ at mail.mil
> > > > > >
> > > > > >
> > > > > >
> > > > > > CLASSIFICATION: UNCLASSIFIED
> > > > > >
> > > > > >
> > > > >
> > > > >
> > > > > --
> > > > > Julie Prestopnik
> > > > > National Center for Atmospheric Research Research
Applications
> > > > > Laboratory
> > > > > Phone: 303.497.8399
> > > > > Email: jpresto at ucar.edu
> > > > >
> > > > >
> > > > > CLASSIFICATION: UNCLASSIFIED
> > > > >
> > > > >
> > > >
> > > >
> > > > --
> > > > Julie Prestopnik
> > > > National Center for Atmospheric Research Research Applications
> > > > Laboratory
> > > > Phone: 303.497.8399
> > > > Email: jpresto at ucar.edu
> > > >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > >
> > >
> > >
> > > --
> > > Julie Prestopnik
> > > National Center for Atmospheric Research Research Applications
> > > Laboratory
> > > Phone: 303.497.8399
> > > Email: jpresto at ucar.edu
> > >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > >
> >
> >
> > --
> > Julie Prestopnik
> > National Center for Atmospheric Research Research Applications
> > Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> >
>
>
> --
> Julie Prestopnik
> National Center for Atmospheric Research Research Applications
Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Raby, John W USA CIV
Time: Wed Jan 18 10:17:40 2017
CLASSIFICATION: UNCLASSIFIED
Julie -
After all the work accomplished so far, the prospect of moving ahead
does
sound better than trying to go backwards. I think as long as I can
figure out
how to explicitly set the correct paths to my compiled version of the
required
libraries, then that would solve that problem. How about
ghostscript? Should
I compile it? I think it's worth a try since I've come this far. I
didn't see
the steps for this in the tutorial.
I'll follow the tutorial steps then to move forward with the MET V5.2
sw.
R/
John
-----Original Message-----
From: Julie Prestopnik via RT [mailto:met_help at ucar.edu]
Sent: Wednesday, January 18, 2017 9:47 AM
To: Raby, John W CIV USARMY RDECOM ARL (US)
<john.w.raby2.civ at mail.mil>
Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
compiling
cairo library for MET V5.2 (UNCLASSIFIED)
All active links contained in this email were disabled. Please verify
the
identity of the sender, and confirm the authenticity of all links
contained
within the message prior to copying and pasting the address to a Web
browser.
----
Hi John. I think you shouldn't have to dig in at this level. It
sounds like
you were making good progress installing the third party libraries,
until you
hit the problem with the version of pixman for Cairo. Cairo is only
required
for using the MODE graphics tool which has limited utility.
I would suggest moving on and trying to build MET excluding "
*--enable-mode_graphics*" from the call to configure, so that you
don't build
the MODE graphics tool. Please let us know how that goes.
I hope that helps!
Julie
On Wed, Jan 18, 2017 at 9:22 AM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> <Caution-url:
> Caution-https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
> CLASSIFICATION: UNCLASSIFIED
>
> Julie -
>
> Thanks for showing me the commands you did yesterday. This has shown
> that there may be existing libraries on the system which may provide
> the required ones for MET V5.2. I gather that something (my
profile?)
> sets this path as the default location for such libraries based on
the
> observation we made yesterday that Cairo attempted to find pixman at
> /usr/lib64/. I think it might be wise to at least see which of the
> required libraries for MET V5.2 may be at locations on the system
> before contacting my system admin to advise on which will require
> upgrade to meet the MET requirements. I'm also considering learning
> how to modify the default paths myself to point to the libraries
I've
> compiled over the past couple of weeks, to be prepared in case
system
> admin can't help with this.
>
> Regards each of the required libraries that I've already compiled,
if
> I look in the install directory, where would I need to look and what
> would I need to look for to identify the required library/version?
> What attribute in the filename would distinguish that version (built
> with Intel compiler) could I key on so that when I look on the
system
> I could spot it from all the other versions for other compilers? For
> example, I navigated to the NetCDF version I compiled at
> /p/home/jraby/NetCDF/netcdf-4.1.1/lib and looked at the contents
which
> are as follows:
>
> excalibur:~jraby/NetCDF/netcdf-4.1.1/lib
> > ls
> libnetcdf.a libnetcdf.la* libnetcdf_c++.a libnetcdf_c++.la*
> pkgconfig/
>
> The version of these files is 4.4.1 based on the name of the install
> directory "netcdf-4.1.1".
>
> Then, while there, I executed the command you showed me,
> /sbin/ldconfig -p
> |
> grep netcdf to show the available compiled versions of libnetcdf
which
> are present on the system. See the following subset of that list
which
> have the string "intel" in the name.
>
> libnetcdff_parallel_intel.so.6 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdff_parallel_intel.so.6
> libnetcdff_parallel_intel.so.mpich31.5 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdff_parallel_intel.so.mpich31.5
> libnetcdff_intel.so.6 (libc6,x86-64) => /opt/cray/lib64/libnetcdff_
> intel.so.6
> libnetcdff_intel.so.5 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdff_intel.so.5
> libnetcdf_parallel_intel.so.11 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdf_parallel_intel.so.11
> libnetcdf_parallel_intel.so.mpich31.7 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdf_parallel_intel.so.mpich31.7
> libnetcdf_intel.so.11 (libc6,x86-64) => /opt/cray/lib64/libnetcdf_
> intel.so.11
> libnetcdf_intel.so.7 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdf_intel.so.7
> libnetcdf_c++4_parallel_intel.so.mpich31.1 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdf_c++4_parallel_intel.so.mpich31.1
> libnetcdf_c++4_intel.so.1 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdf_c++4_intel.so.1
>
> All the others listed are compiled ( I assume) with pgi, gnu, cray,
> etc by virtue of the presence of a string which contains those
characters.
>
> My thought is that I have to find the intel version listed above
which
> is appropriate for my situation and then use the other command you
> provided yesterday to determine the version and then compare that
with
> my compiled version to see if the system has a version at least as
new at
> mine.
>
> For example, using the first intel version listed above:
> libnetcdff_parallel_intel.so.6 (libc6,x86-64) =>
> /opt/cray/lib64/libnetcdff_parallel_intel.so.6
>
> ls -l /opt/cray/lib64/libnetcdff_parallel_intel.so.6 which produced
> the
> following:
>
> lrwxrwxrwx 1 root root 83 Nov 11 2015
> /opt/cray/lib64/libnetcdff_parallel_intel.so.6 ->
> /opt/cray/netcdf-hdf5parallel/4.3.3.1/INTEL/14.0/lib/
> libnetcdff_parallel_intel.so.6*
>
> which shows the version is 4.3.3.1? Is this the version number I'm
> looking for?
>
> Is there any way to tell from the list of intel netcdf versions
above
> which ones I should choose to further determine the versions for
> comparison with mine (4.4.1)?
>
> Thanks.
>
> R/
> John
>
>
>
>
>
>
>
>
>
>
>
> -----Original Message-----
> From: Julie Prestopnik via RT [Caution-mailto:met_help at ucar.edu]
> Sent: Tuesday, January 17, 2017 3:20 PM
> To: Raby, John W CIV USARMY RDECOM ARL (US)
> <john.w.raby2.civ at mail.mil>
> Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> compiling cairo library for MET V5.2 (UNCLASSIFIED)
>
> All active links contained in this email were disabled. Please
verify
> the identity of the sender, and confirm the authenticity of all
links
> contained within the message prior to copying and pasting the
address
> to a Web browser.
>
>
>
>
> ----
>
> Yes, that sounds reasonable. I do not think that configure will
find
> the files automatically though, unless they're installed where
expected.
> You'll likely need to set LDFLAGS and CPPFLAGS to point to the
> necessary library files and include files, respectively, either as
> environment variables or perhaps configure would accept the
following:
>
> ./configure LDFLAGS=-L/shared/lib CPPFLAGS=-I/shared/include
...other
> options...
>
> Again this is outside of our expertise. You might consider
consulting
> with your system administrator regarding this issue. I hope this
helps.
>
> Julie
>
> On Tue, Jan 17, 2017 at 3:11 PM, Raby, John W USA CIV via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <Caution-Caution-url:
> > Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79
> > 175 >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> > Julie -
> >
> > I'll give it a try and let you know the results. If it's
successful,
> > then I guess I would need to rerun the ./configure for Cairo, but
> > somehow point it to access my compiled version of libpixman. Does
> > this seem reasonable to you?
> > Maybe the configure will find it automatically? I'm not sure how
> > that works.
> >
> > R/
> > John
> >
> > -----Original Message-----
> > From: Julie Prestopnik via RT
> > [Caution-Caution-mailto:met_help at ucar.edu]
> > Sent: Tuesday, January 17, 2017 3:02 PM
> > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > <john.w.raby2.civ at mail.mil>
> > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> >
> > All active links contained in this email were disabled. Please
> > verify the identity of the sender, and confirm the authenticity of
> > all links contained within the message prior to copying and
pasting
> > the address to a Web browser.
> >
> >
> >
> >
> > ----
> >
> > Hi John.
> >
> > This is outside my area of expertise, but I don't think it would
> > hurt to try it.
> >
> > Julie
> >
> > On Tue, Jan 17, 2017 at 2:55 PM, Raby, John W USA CIV via RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > <Caution-Caution-Caution-url:
> > > Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > html?id=79
> > > 175 >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > > I see the following:
> > >
> > > Caution-Caution-Caution-
https://cairographics.org/releases/pixman-
> > > 0.32.6.tar
> > > .gz
> > >
> > > Could I just compile it myself using similar commands as I've
used
> > > for the other libraries?
> > >
> > > R/
> > > John
> > >
> > >
> > > -----Original Message-----
> > > From: Julie Prestopnik via RT
> > > [Caution-Caution-Caution-mailto:met_help at ucar.edu]
> > > Sent: Tuesday, January 17, 2017 2:47 PM
> > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > <john.w.raby2.civ at mail.mil>
> > > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
Problem
> > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > >
> > > All active links contained in this email were disabled. Please
> > > verify the identity of the sender, and confirm the authenticity
of
> > > all links contained within the message prior to copying and
> > > pasting the address to a Web browser.
> > >
> > >
> > >
> > >
> > > ----
> > >
> > > Hi John.
> > >
> > > "I didn't compile libpixman myself, so it must have been
compiled
> > > as part of the overall system by the administrators."
> > >
> > > Yes, I suspect that is the case. I don't have any experience
with
> > > pixman either. I hope your administrators will be able to help.
> > >
> > > Julie
> > >
> > > On Tue, Jan 17, 2017 at 2:34 PM, Raby, John W USA CIV via RT <
> > > met_help at ucar.edu> wrote:
> > >
> > > >
> > > > <Caution-Caution-Caution-Caution-url:
> > > > Caution-Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > > html?id=79
> > > > 175 >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > > Julie -
> > > >
> > > > You are correct. Thanks for catching it so quickly. See the
> following:
> > > >
> > > > excalibur:~jraby/cairo
> > > > > /sbin/ldconfig -p | grep libpixman
> > > > libpixman-1.so.0 (libc6,x86-64) =>
> /usr/lib64/libpixman-1.so.0
> > > > libpixman-1.so.0 (libc6) => /usr/lib/libpixman-1.so.0
> > > > libpixman-1.so (libc6,x86-64) =>
> > > > /usr/lib64/libpixman-1.so excalibur:~jraby/cairo
> > > >
> > > > I used the other command (ls -l) to find out the version:
> > > >
> > > > > ls -l /usr/lib64/libpixman-1.so
> > > > lrwxrwxrwx 1 root root 21 Apr 7 2015 /usr/lib64/libpixman-
1.so
> > > > ->
> > > > libpixman-1.so.0.24.4*
> > > > excalibur:~jraby/cairo
> > > > > ls -l /usr/lib/libpixman-1.so.0
> > > > lrwxrwxrwx 1 root root 21 Jan 29 2015 /usr/lib/libpixman-
1.so.0
> > > > ->
> > > > libpixman-1.so.0.24.4*
> > > > excalibur:~jraby/cairo
> > > >
> > > > This confirms what was noted in the log file as you pointed
out.
> > > >
> > > > I didn't compile libpixman myself, so it must have been
compiled
> > > > as part of the overall system by the administrators.
> > > >
> > > > R/
> > > > John
> > > >
> > > > -----Original Message-----
> > > > From: Julie Prestopnik via RT
> > > > [Caution-Caution-Caution-Caution-mailto:met_help at ucar.edu]
> > > > Sent: Tuesday, January 17, 2017 2:19 PM
> > > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > > <john.w.raby2.civ at mail.mil>
> > > > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
> > > > Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > > >
> > > > All active links contained in this email were disabled.
Please
> > > > verify the identity of the sender, and confirm the
authenticity
> > > > of all links contained within the message prior to copying and
> > > > pasting the address to a Web browser.
> > > >
> > > >
> > > >
> > > >
> > > > ----
> > > >
> > > > Hi John.
> > > >
> > > > It looks like you have "idconfig" note the "i" (lower case i),
> > > > but it should be "l" (lower case l).
> > > >
> > > > Try copying and pasting this to see if it lives in /sbin:
> > > >
> > > > ls /sbin/ldconfig
> > > >
> > > > I hope that helps!
> > > >
> > > > Julie
> > > >
> > > > On Tue, Jan 17, 2017 at 1:58 PM, Raby, John W USA CIV via RT <
> > > > met_help at ucar.edu> wrote:
> > > >
> > > > >
> > > > > <Caution-Caution-Caution-Caution-Caution-url:
> > > > > Caution-Caution-Caution-Caution-Caution-https://rt.rap.ucar.
> edu/rt/Ticket/Display.
> > > > > html?id=79
> > > > > 175 >
> > > > >
> > > > > CLASSIFICATION: UNCLASSIFIED
> > > > >
> > > > > Julie -
> > > > >
> > > > > I'm running into a brick wall trying to locate pixman on my
system.
> > > > > See the following responses when attempting to use your
> > > > > suggested
> > > > command:
> > > > >
> > > > > excalibur:~jraby
> > > > > > idconfig -p | grep libpixman
> > > > > -bash: idconfig: command not found excalibur:~jraby
> > > > > > /sbin/idconfig -p | grep libpixman
> > > > > -bash: /sbin/idconfig: No such file or directory
> > > > > excalibur:~jraby
> > > > > > idconfig
> > > > > If 'idconfig' is not a typo you can run the following
command
> > > > > to lookup the package that contains the binary:
> > > > > command-not-found idconfig
> > > > > -bash: idconfig: command not found excalibur:~jraby
> > > > > > command-not-found idconfig
> > > > > excalibur:~jraby
> > > > > > which libpixman
> > > > > which: no libpixman in
> > > > > (/opt/intel/compilers_and_libraries_2016.0.109/linux/
> > > > > bin/intel64:/opt/intel/compilers_and_libraries_2016.
> > > > > 0.109/linux/mpi/intel64/bin:/opt/intel/debugger_2016/gdb/
> > > > > intel64_mic/bin:/opt/cray/hdf5/1.8.13/bin:/opt/cray/
> > > > > netcdf/4.3.2/bin:/opt/cray/mpt/7.1.0/gni/bin:/opt/cray/
> > > > > rca/1.0.0-2.0502.53711.3.127.ari/bin:/opt/cray/alps/5.2.1-
> > > > > 2.0502.9041.11.6.ari/sbin:/opt/cray/alps/5.2.1-2.0502.
> > > > > 9041.11.6.ari/bin:/opt/cray/dvs/2.5_0.9.0-1.0502.1873.1.
> > > > > 145.ari/bin:/opt/cray/xpmem/0.1-2.0502.55507.3.2.ari/bin:/
> > > > > opt/cray/dmapp/7.0.1-1.0502.9501.5.219.ari/bin:/opt/cray/
> > > > > pmi/5.0.8-1.0000.10843.170.1.ari/bin:/opt/cray/ugni/5.0-1.
> > > > > 0502.9685.4.24.ari/bin:/opt/cray/udreg/2.3.2-1.0502.9275.
> > > > > 1.12.ari/bin:/usr/people/PBS/SLB:/app/unsupported/BC:/usr/
> > > > > krb5/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/
> > > > > default/bin:/opt/pbs/default/bin:/opt/cray/craype/2.4.1/
> > > > > bin:/opt/cray/switch/1.0-1.0502.60522.1.61.ari/bin:/opt/
> > > > > cray/eslogin/eswrap/1.3.3-1.020200.1278.0/bin:/opt/modules/
> > > > > 3.2.10.3/bin:/usr/local/bin:/usr/bin:/bin:/u
> > > > > sr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/
> > > > > bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/sbin:/usr/sbin:/usr/
> > > > > lib/qt3/bin:/opt/cray/bin:/usr/brl/bin:/usr/brl/bin:/usr/
> > > > > brl/bin:/opt/cray/netcdf/4.3.2/INTEL/140/bin:/p/home/jraby/
> Scripts:.
> > > > > )
> > > > > excalibur:~jraby
> > > > >
> > > > > Is this something I could download and compile the same way
> > > > > I've been doing with the other libraries? If so what is the
> > > > > download site your recommend for obtaining the 0.30.0 or
later
> > > > > version?
> > > > >
> > > > > Thanks.
> > > > >
> > > > > R/
> > > > > John
> > > > >
> > > > > -----Original Message-----
> > > > > From: Julie Prestopnik via RT
> > > > > [Caution-Caution-Caution-Caution-Caution-
mailto:met_help at ucar.
> > > > > edu]
> > > > > Sent: Tuesday, January 17, 2017 1:42 PM
> > > > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > > > <john.w.raby2.civ at mail.mil>
> > > > > Subject: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
Problem
> > > > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > > > >
> > > > > All active links contained in this email were disabled.
> > > > > Please verify the identity of the sender, and confirm the
> > > > > authenticity of all links contained within the message prior
> > > > > to copying and pasting the address to a Web browser.
> > > > >
> > > > >
> > > > >
> > > > >
> > > > > ----
> > > > >
> > > > > Hi John. It looks like you need a newer version of pixman.
> > > > > The log file shows the installed pixman version is 0.24.4
and
> > > > > cairo requires
> > > > > 0.30.0 or later version. We are using version 0.32.6.
> > > > >
> > > > > The log file complains two issues:
> > > > > 1. missing header files (Makefile was generated with the
same
> > > > > errors that we have seen) 2. pixman version <== "Requested
> > > > > 'pixman-1 >= 0.30.0' but version of Pixman is 0.24.4"
> > > > >
> > > > > If you want to check your pixman version:
> > > > >
> > > > > 1: Get the library path from the following command (check
path
> for
> > > > > ldconfig if get "command not found" - may be in /sbin/)
> > > > > ldconfig -p | grep libpixman
> > > > >
> > > > > 2. Check the version number by getting real file name
from
> above.
> > > For
> > > > > example,
> > > > > ls -l /usr/lib64/libpixman*
> > > > >
> > > > > I hope this helps!
> > > > >
> > > > > Julie
> > > > >
> > > > >
> > > > >
> > > > >
> > > > >
> > > > > On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via
RT
> > > > > < met_help at ucar.edu> wrote:
> > > > >
> > > > > >
> > > > > > Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> > > > > > Transaction: Ticket created by john.w.raby2.civ at mail.mil
> > > > > > Queue: met_help
> > > > > > Subject: Problem compiling cairo library for MET V5.2
> > > > (UNCLASSIFIED)
> > > > > > Owner: Nobody
> > > > > > Requestors: john.w.raby2.civ at mail.mil
> > > > > > Status: new
> > > > > > Ticket <Caution-Caution-Caution-Caution-Caution-Caution-
url:
> > > > > > Caution-Caution-Caution-Caution-Caution-Caution-
https://rt.rap.ucar.
> > edu/rt/Ticket/Display.
> > > > > > html?id=79
> > > > > > 175 >
> > > > > >
> > > > > >
> > > > > > CLASSIFICATION: UNCLASSIFIED
> > > > > >
> > > > > > I followed the instructions in the V5.2 tutorial and
> > > > > > downloaded/unpacked the tarball named "cairo-
1.14.6.tar.xz"
> > > > > > from
> > > site:
> > > > > > Caution-Caution-Caution-Caution-Caution-Caution-
https://cairographics.
> > > > > > org/releas
> > > > > > es/
> > > > > >
> > > > > > After unpacking I have a configure script, but not a
> > > > > > makefile
> > script.
> > > > > >
> > > > > > I ran ./configure --prefix=/p/home/jraby/cairo/cairo-
1.14.6,
> > > > > > but still did not see a makefile script.
> > > > > >
> > > > > > The attached log file documents several errors and a
> > > > > > catastrophic failure as
> > > > > > follows:
> > > > > >
> > > > > > "conftest.c(52): catastrophic error: cannot open source
file
> > > > > > "minix/config.h"
> > > > > > #include <minix/config.h>"
> > > > > >
> > > > > > I don't see the sub directory "minix" in the install dir.
> > > > > >
> > > > > > Judging from the number and severity of the errors, it
seems
> > > > > > like I have a problem with the tarball.
> > > > > >
> > > > > > I repeated the above starting with a new download of the
> > > > > > same tarball and the result was the same.
> > > > > >
> > > > > > Is it possible I have the wrong tarball? If so, do you
have
> > > > > > another download site to acquire this tarball or a
> > > > > > recommendation of a more updated version that's been
tested?
> > > > > >
> > > > > > Do you have any suggestions on a way to resolve this
issue?
> > > > > >
> > > > > > Thanks.
> > > > > >
> > > > > > R/
> > > > > > John
> > > > > >
> > > > > > Mr John W. Raby, Meteorologist U.S. Army Research
Laboratory
> > > > > > White Sands Missile Range, NM 88002
> > > > > > (575) 678-2004 DSN 258-2004
> > > > > > FAX (575) 678-1230 DSN 258-1230
> > > > > > Email: john.w.raby2.civ at mail.mil
> > > > > >
> > > > > >
> > > > > >
> > > > > > CLASSIFICATION: UNCLASSIFIED
> > > > > >
> > > > > >
> > > > >
> > > > >
> > > > > --
> > > > > Julie Prestopnik
> > > > > National Center for Atmospheric Research Research
Applications
> > > > > Laboratory
> > > > > Phone: 303.497.8399
> > > > > Email: jpresto at ucar.edu
> > > > >
> > > > >
> > > > > CLASSIFICATION: UNCLASSIFIED
> > > > >
> > > > >
> > > >
> > > >
> > > > --
> > > > Julie Prestopnik
> > > > National Center for Atmospheric Research Research Applications
> > > > Laboratory
> > > > Phone: 303.497.8399
> > > > Email: jpresto at ucar.edu
> > > >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > >
> > >
> > >
> > > --
> > > Julie Prestopnik
> > > National Center for Atmospheric Research Research Applications
> > > Laboratory
> > > Phone: 303.497.8399
> > > Email: jpresto at ucar.edu
> > >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > >
> >
> >
> > --
> > Julie Prestopnik
> > National Center for Atmospheric Research Research Applications
> > Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> >
>
>
> --
> Julie Prestopnik
> National Center for Atmospheric Research Research Applications
> Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research Research Applications
Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
CLASSIFICATION: UNCLASSIFIED
------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Julie Prestopnik
Time: Wed Jan 18 10:27:43 2017
Hi John.
Hopefully, the MET instructions here:
http://www.dtcenter.org/met/users/support/online_tutorial/METv5.2/tutorial.php?name=compilation&category=configure
will help you to set the correct paths to your compiled versions of
the
required libraries.
I think the only page on the tutorial that mentions ghostscript is:
http://www.dtcenter.org/met/users/support/online_tutorial/METv5.2/tutorial.php?name=plot_mode_field&category=index
Do you plan on using the Plot-MODE-Field tool? If not, don't worry
about
the ghostscript fonts. If so, there is no compiling necessary - you'd
simply grab the gzipped tar file from the link provided, download the
data
and unpack it in the MET *data* directory and then define the
*MET_FONT_DIR
*environment variable.
I hope that helps. I'll close this ticket. Please submit a new one
if you
have any problems with compiling MET.
Thanks,
Julie
On Wed, Jan 18, 2017 at 10:17 AM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
> CLASSIFICATION: UNCLASSIFIED
>
> Julie -
>
> After all the work accomplished so far, the prospect of moving ahead
does
> sound better than trying to go backwards. I think as long as I can
figure
> out
> how to explicitly set the correct paths to my compiled version of
the
> required
> libraries, then that would solve that problem. How about
ghostscript?
> Should
> I compile it? I think it's worth a try since I've come this far. I
didn't
> see
> the steps for this in the tutorial.
>
> I'll follow the tutorial steps then to move forward with the MET
V5.2 sw.
>
> R/
> John
>
>
> -----Original Message-----
> From: Julie Prestopnik via RT [mailto:met_help at ucar.edu]
> Sent: Wednesday, January 18, 2017 9:47 AM
> To: Raby, John W CIV USARMY RDECOM ARL (US)
<john.w.raby2.civ at mail.mil>
> Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> compiling
> cairo library for MET V5.2 (UNCLASSIFIED)
>
> All active links contained in this email were disabled. Please
verify the
> identity of the sender, and confirm the authenticity of all links
contained
> within the message prior to copying and pasting the address to a Web
> browser.
>
>
>
>
> ----
>
> Hi John. I think you shouldn't have to dig in at this level. It
sounds
> like
> you were making good progress installing the third party libraries,
until
> you
> hit the problem with the version of pixman for Cairo. Cairo is only
> required
> for using the MODE graphics tool which has limited utility.
> I would suggest moving on and trying to build MET excluding "
> *--enable-mode_graphics*" from the call to configure, so that you
don't
> build
> the MODE graphics tool. Please let us know how that goes.
>
> I hope that helps!
>
> Julie
>
> On Wed, Jan 18, 2017 at 9:22 AM, Raby, John W USA CIV via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <Caution-url:
> > Caution-https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> > Julie -
> >
> > Thanks for showing me the commands you did yesterday. This has
shown
> > that there may be existing libraries on the system which may
provide
> > the required ones for MET V5.2. I gather that something (my
profile?)
> > sets this path as the default location for such libraries based on
the
> > observation we made yesterday that Cairo attempted to find pixman
at
> > /usr/lib64/. I think it might be wise to at least see which of the
> > required libraries for MET V5.2 may be at locations on the system
> > before contacting my system admin to advise on which will require
> > upgrade to meet the MET requirements. I'm also considering
learning
> > how to modify the default paths myself to point to the libraries
I've
> > compiled over the past couple of weeks, to be prepared in case
system
> > admin can't help with this.
> >
> > Regards each of the required libraries that I've already compiled,
if
> > I look in the install directory, where would I need to look and
what
> > would I need to look for to identify the required library/version?
> > What attribute in the filename would distinguish that version
(built
> > with Intel compiler) could I key on so that when I look on the
system
> > I could spot it from all the other versions for other compilers?
For
> > example, I navigated to the NetCDF version I compiled at
> > /p/home/jraby/NetCDF/netcdf-4.1.1/lib and looked at the contents
which
> > are as follows:
> >
> > excalibur:~jraby/NetCDF/netcdf-4.1.1/lib
> > > ls
> > libnetcdf.a libnetcdf.la* libnetcdf_c++.a libnetcdf_c++.la*
> > pkgconfig/
> >
> > The version of these files is 4.4.1 based on the name of the
install
> > directory "netcdf-4.1.1".
> >
> > Then, while there, I executed the command you showed me,
> > /sbin/ldconfig -p
> > |
> > grep netcdf to show the available compiled versions of libnetcdf
which
> > are present on the system. See the following subset of that list
which
> > have the string "intel" in the name.
> >
> > libnetcdff_parallel_intel.so.6 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdff_parallel_intel.so.6
> > libnetcdff_parallel_intel.so.mpich31.5 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdff_parallel_intel.so.mpich31.5
> > libnetcdff_intel.so.6 (libc6,x86-64) =>
/opt/cray/lib64/libnetcdff_
> > intel.so.6
> > libnetcdff_intel.so.5 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdff_intel.so.5
> > libnetcdf_parallel_intel.so.11 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdf_parallel_intel.so.11
> > libnetcdf_parallel_intel.so.mpich31.7 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdf_parallel_intel.so.mpich31.7
> > libnetcdf_intel.so.11 (libc6,x86-64) => /opt/cray/lib64/libnetcdf_
> > intel.so.11
> > libnetcdf_intel.so.7 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdf_intel.so.7
> > libnetcdf_c++4_parallel_intel.so.mpich31.1 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdf_c++4_parallel_intel.so.mpich31.1
> > libnetcdf_c++4_intel.so.1 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdf_c++4_intel.so.1
> >
> > All the others listed are compiled ( I assume) with pgi, gnu,
cray,
> > etc by virtue of the presence of a string which contains those
> characters.
> >
> > My thought is that I have to find the intel version listed above
which
> > is appropriate for my situation and then use the other command you
> > provided yesterday to determine the version and then compare that
with
> > my compiled version to see if the system has a version at least as
new at
> > mine.
> >
> > For example, using the first intel version listed above:
> > libnetcdff_parallel_intel.so.6 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdff_parallel_intel.so.6
> >
> > ls -l /opt/cray/lib64/libnetcdff_parallel_intel.so.6 which
produced
> > the
> > following:
> >
> > lrwxrwxrwx 1 root root 83 Nov 11 2015
> > /opt/cray/lib64/libnetcdff_parallel_intel.so.6 ->
> > /opt/cray/netcdf-hdf5parallel/4.3.3.1/INTEL/14.0/lib/
> > libnetcdff_parallel_intel.so.6*
> >
> > which shows the version is 4.3.3.1? Is this the version number I'm
> > looking for?
> >
> > Is there any way to tell from the list of intel netcdf versions
above
> > which ones I should choose to further determine the versions for
> > comparison with mine (4.4.1)?
> >
> > Thanks.
> >
> > R/
> > John
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> > -----Original Message-----
> > From: Julie Prestopnik via RT [Caution-mailto:met_help at ucar.edu]
> > Sent: Tuesday, January 17, 2017 3:20 PM
> > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > <john.w.raby2.civ at mail.mil>
> > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> >
> > All active links contained in this email were disabled. Please
verify
> > the identity of the sender, and confirm the authenticity of all
links
> > contained within the message prior to copying and pasting the
address
> > to a Web browser.
> >
> >
> >
> >
> > ----
> >
> > Yes, that sounds reasonable. I do not think that configure will
find
> > the files automatically though, unless they're installed where
expected.
> > You'll likely need to set LDFLAGS and CPPFLAGS to point to the
> > necessary library files and include files, respectively, either as
> > environment variables or perhaps configure would accept the
following:
> >
> > ./configure LDFLAGS=-L/shared/lib CPPFLAGS=-I/shared/include
...other
> > options...
> >
> > Again this is outside of our expertise. You might consider
consulting
> > with your system administrator regarding this issue. I hope this
helps.
> >
> > Julie
> >
> > On Tue, Jan 17, 2017 at 3:11 PM, Raby, John W USA CIV via RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > <Caution-Caution-url:
> > > Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79
> > > 175 >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > > Julie -
> > >
> > > I'll give it a try and let you know the results. If it's
successful,
> > > then I guess I would need to rerun the ./configure for Cairo,
but
> > > somehow point it to access my compiled version of libpixman.
Does
> > > this seem reasonable to you?
> > > Maybe the configure will find it automatically? I'm not sure how
> > > that works.
> > >
> > > R/
> > > John
> > >
> > > -----Original Message-----
> > > From: Julie Prestopnik via RT
> > > [Caution-Caution-mailto:met_help at ucar.edu]
> > > Sent: Tuesday, January 17, 2017 3:02 PM
> > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > <john.w.raby2.civ at mail.mil>
> > > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
Problem
> > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > >
> > > All active links contained in this email were disabled. Please
> > > verify the identity of the sender, and confirm the authenticity
of
> > > all links contained within the message prior to copying and
pasting
> > > the address to a Web browser.
> > >
> > >
> > >
> > >
> > > ----
> > >
> > > Hi John.
> > >
> > > This is outside my area of expertise, but I don't think it would
> > > hurt to try it.
> > >
> > > Julie
> > >
> > > On Tue, Jan 17, 2017 at 2:55 PM, Raby, John W USA CIV via RT <
> > > met_help at ucar.edu> wrote:
> > >
> > > >
> > > > <Caution-Caution-Caution-url:
> > > > Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > > html?id=79
> > > > 175 >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > > I see the following:
> > > >
> > > > Caution-Caution-Caution-
https://cairographics.org/releases/pixman-
> > > > 0.32.6.tar
> > > > .gz
> > > >
> > > > Could I just compile it myself using similar commands as I've
used
> > > > for the other libraries?
> > > >
> > > > R/
> > > > John
> > > >
> > > >
> > > > -----Original Message-----
> > > > From: Julie Prestopnik via RT
> > > > [Caution-Caution-Caution-mailto:met_help at ucar.edu]
> > > > Sent: Tuesday, January 17, 2017 2:47 PM
> > > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > > <john.w.raby2.civ at mail.mil>
> > > > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
Problem
> > > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > > >
> > > > All active links contained in this email were disabled.
Please
> > > > verify the identity of the sender, and confirm the
authenticity of
> > > > all links contained within the message prior to copying and
> > > > pasting the address to a Web browser.
> > > >
> > > >
> > > >
> > > >
> > > > ----
> > > >
> > > > Hi John.
> > > >
> > > > "I didn't compile libpixman myself, so it must have been
compiled
> > > > as part of the overall system by the administrators."
> > > >
> > > > Yes, I suspect that is the case. I don't have any experience
with
> > > > pixman either. I hope your administrators will be able to
help.
> > > >
> > > > Julie
> > > >
> > > > On Tue, Jan 17, 2017 at 2:34 PM, Raby, John W USA CIV via RT <
> > > > met_help at ucar.edu> wrote:
> > > >
> > > > >
> > > > > <Caution-Caution-Caution-Caution-url:
> > > > > Caution-Caution-Caution-Caution-https://rt.rap.ucar.
> edu/rt/Ticket/Display.
> > > > > html?id=79
> > > > > 175 >
> > > > >
> > > > > CLASSIFICATION: UNCLASSIFIED
> > > > >
> > > > > Julie -
> > > > >
> > > > > You are correct. Thanks for catching it so quickly. See the
> > following:
> > > > >
> > > > > excalibur:~jraby/cairo
> > > > > > /sbin/ldconfig -p | grep libpixman
> > > > > libpixman-1.so.0 (libc6,x86-64) =>
> > /usr/lib64/libpixman-1.so.0
> > > > > libpixman-1.so.0 (libc6) => /usr/lib/libpixman-
1.so.0
> > > > > libpixman-1.so (libc6,x86-64) =>
> > > > > /usr/lib64/libpixman-1.so excalibur:~jraby/cairo
> > > > >
> > > > > I used the other command (ls -l) to find out the version:
> > > > >
> > > > > > ls -l /usr/lib64/libpixman-1.so
> > > > > lrwxrwxrwx 1 root root 21 Apr 7 2015 /usr/lib64/libpixman-
1.so
> > > > > ->
> > > > > libpixman-1.so.0.24.4*
> > > > > excalibur:~jraby/cairo
> > > > > > ls -l /usr/lib/libpixman-1.so.0
> > > > > lrwxrwxrwx 1 root root 21 Jan 29 2015 /usr/lib/libpixman-
1.so.0
> > > > > ->
> > > > > libpixman-1.so.0.24.4*
> > > > > excalibur:~jraby/cairo
> > > > >
> > > > > This confirms what was noted in the log file as you pointed
out.
> > > > >
> > > > > I didn't compile libpixman myself, so it must have been
compiled
> > > > > as part of the overall system by the administrators.
> > > > >
> > > > > R/
> > > > > John
> > > > >
> > > > > -----Original Message-----
> > > > > From: Julie Prestopnik via RT
> > > > > [Caution-Caution-Caution-Caution-mailto:met_help at ucar.edu]
> > > > > Sent: Tuesday, January 17, 2017 2:19 PM
> > > > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > > > <john.w.raby2.civ at mail.mil>
> > > > > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
> > > > > Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > > > >
> > > > > All active links contained in this email were disabled.
Please
> > > > > verify the identity of the sender, and confirm the
authenticity
> > > > > of all links contained within the message prior to copying
and
> > > > > pasting the address to a Web browser.
> > > > >
> > > > >
> > > > >
> > > > >
> > > > > ----
> > > > >
> > > > > Hi John.
> > > > >
> > > > > It looks like you have "idconfig" note the "i" (lower case
i),
> > > > > but it should be "l" (lower case l).
> > > > >
> > > > > Try copying and pasting this to see if it lives in /sbin:
> > > > >
> > > > > ls /sbin/ldconfig
> > > > >
> > > > > I hope that helps!
> > > > >
> > > > > Julie
> > > > >
> > > > > On Tue, Jan 17, 2017 at 1:58 PM, Raby, John W USA CIV via RT
<
> > > > > met_help at ucar.edu> wrote:
> > > > >
> > > > > >
> > > > > > <Caution-Caution-Caution-Caution-Caution-url:
> > > > > > Caution-Caution-Caution-Caution-Caution-
https://rt.rap.ucar.
> > edu/rt/Ticket/Display.
> > > > > > html?id=79
> > > > > > 175 >
> > > > > >
> > > > > > CLASSIFICATION: UNCLASSIFIED
> > > > > >
> > > > > > Julie -
> > > > > >
> > > > > > I'm running into a brick wall trying to locate pixman on
my
> system.
> > > > > > See the following responses when attempting to use your
> > > > > > suggested
> > > > > command:
> > > > > >
> > > > > > excalibur:~jraby
> > > > > > > idconfig -p | grep libpixman
> > > > > > -bash: idconfig: command not found excalibur:~jraby
> > > > > > > /sbin/idconfig -p | grep libpixman
> > > > > > -bash: /sbin/idconfig: No such file or directory
> > > > > > excalibur:~jraby
> > > > > > > idconfig
> > > > > > If 'idconfig' is not a typo you can run the following
command
> > > > > > to lookup the package that contains the binary:
> > > > > > command-not-found idconfig
> > > > > > -bash: idconfig: command not found excalibur:~jraby
> > > > > > > command-not-found idconfig
> > > > > > excalibur:~jraby
> > > > > > > which libpixman
> > > > > > which: no libpixman in
> > > > > > (/opt/intel/compilers_and_libraries_2016.0.109/linux/
> > > > > > bin/intel64:/opt/intel/compilers_and_libraries_2016.
> > > > > > 0.109/linux/mpi/intel64/bin:/opt/intel/debugger_2016/gdb/
> > > > > > intel64_mic/bin:/opt/cray/hdf5/1.8.13/bin:/opt/cray/
> > > > > > netcdf/4.3.2/bin:/opt/cray/mpt/7.1.0/gni/bin:/opt/cray/
> > > > > > rca/1.0.0-2.0502.53711.3.127.ari/bin:/opt/cray/alps/5.2.1-
> > > > > > 2.0502.9041.11.6.ari/sbin:/opt/cray/alps/5.2.1-2.0502.
> > > > > > 9041.11.6.ari/bin:/opt/cray/dvs/2.5_0.9.0-1.0502.1873.1.
> > > > > > 145.ari/bin:/opt/cray/xpmem/0.1-2.0502.55507.3.2.ari/bin:/
> > > > > > opt/cray/dmapp/7.0.1-1.0502.9501.5.219.ari/bin:/opt/cray/
> > > > > > pmi/5.0.8-1.0000.10843.170.1.ari/bin:/opt/cray/ugni/5.0-1.
> > > > > > 0502.9685.4.24.ari/bin:/opt/cray/udreg/2.3.2-1.0502.9275.
> > > > > > 1.12.ari/bin:/usr/people/PBS/SLB:/app/unsupported/BC:/usr/
> > > > > > krb5/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/
> > > > > > default/bin:/opt/pbs/default/bin:/opt/cray/craype/2.4.1/
> > > > > > bin:/opt/cray/switch/1.0-1.0502.60522.1.61.ari/bin:/opt/
> > > > > > cray/eslogin/eswrap/1.3.3-
1.020200.1278.0/bin:/opt/modules/
> > > > > > 3.2.10.3/bin:/usr/local/bin:/usr/bin:/bin:/u
> > > > > > sr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/
> > > > > >
bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/sbin:/usr/sbin:/usr/
> > > > > > lib/qt3/bin:/opt/cray/bin:/usr/brl/bin:/usr/brl/bin:/usr/
> > > > > >
brl/bin:/opt/cray/netcdf/4.3.2/INTEL/140/bin:/p/home/jraby/
> > Scripts:.
> > > > > > )
> > > > > > excalibur:~jraby
> > > > > >
> > > > > > Is this something I could download and compile the same
way
> > > > > > I've been doing with the other libraries? If so what is
the
> > > > > > download site your recommend for obtaining the 0.30.0 or
later
> > > > > > version?
> > > > > >
> > > > > > Thanks.
> > > > > >
> > > > > > R/
> > > > > > John
> > > > > >
> > > > > > -----Original Message-----
> > > > > > From: Julie Prestopnik via RT
> > > > > > [Caution-Caution-Caution-Caution-Caution-
mailto:met_help at ucar.
> > > > > > edu]
> > > > > > Sent: Tuesday, January 17, 2017 1:42 PM
> > > > > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > > > > <john.w.raby2.civ at mail.mil>
> > > > > > Subject: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
Problem
> > > > > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > > > > >
> > > > > > All active links contained in this email were disabled.
> > > > > > Please verify the identity of the sender, and confirm the
> > > > > > authenticity of all links contained within the message
prior
> > > > > > to copying and pasting the address to a Web browser.
> > > > > >
> > > > > >
> > > > > >
> > > > > >
> > > > > > ----
> > > > > >
> > > > > > Hi John. It looks like you need a newer version of
pixman.
> > > > > > The log file shows the installed pixman version is 0.24.4
and
> > > > > > cairo requires
> > > > > > 0.30.0 or later version. We are using version 0.32.6.
> > > > > >
> > > > > > The log file complains two issues:
> > > > > > 1. missing header files (Makefile was generated with the
same
> > > > > > errors that we have seen) 2. pixman version <== "Requested
> > > > > > 'pixman-1 >= 0.30.0' but version of Pixman is 0.24.4"
> > > > > >
> > > > > > If you want to check your pixman version:
> > > > > >
> > > > > > 1: Get the library path from the following command
(check path
> > for
> > > > > > ldconfig if get "command not found" - may be in /sbin/)
> > > > > > ldconfig -p | grep libpixman
> > > > > >
> > > > > > 2. Check the version number by getting real file name
from
> > above.
> > > > For
> > > > > > example,
> > > > > > ls -l /usr/lib64/libpixman*
> > > > > >
> > > > > > I hope this helps!
> > > > > >
> > > > > > Julie
> > > > > >
> > > > > >
> > > > > >
> > > > > >
> > > > > >
> > > > > > On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via
RT
> > > > > > < met_help at ucar.edu> wrote:
> > > > > >
> > > > > > >
> > > > > > > Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> > > > > > > Transaction: Ticket created by john.w.raby2.civ at mail.mil
> > > > > > > Queue: met_help
> > > > > > > Subject: Problem compiling cairo library for MET
V5.2
> > > > > (UNCLASSIFIED)
> > > > > > > Owner: Nobody
> > > > > > > Requestors: john.w.raby2.civ at mail.mil
> > > > > > > Status: new
> > > > > > > Ticket <Caution-Caution-Caution-Caution-Caution-
Caution-url:
> > > > > > > Caution-Caution-Caution-Caution-Caution-Caution-https:
> //rt.rap.ucar.
> > > edu/rt/Ticket/Display.
> > > > > > > html?id=79
> > > > > > > 175 >
> > > > > > >
> > > > > > >
> > > > > > > CLASSIFICATION: UNCLASSIFIED
> > > > > > >
> > > > > > > I followed the instructions in the V5.2 tutorial and
> > > > > > > downloaded/unpacked the tarball named "cairo-
1.14.6.tar.xz"
> > > > > > > from
> > > > site:
> > > > > > > Caution-Caution-Caution-Caution-Caution-Caution-https:
> //cairographics.
> > > > > > > org/releas
> > > > > > > es/
> > > > > > >
> > > > > > > After unpacking I have a configure script, but not a
> > > > > > > makefile
> > > script.
> > > > > > >
> > > > > > > I ran ./configure --prefix=/p/home/jraby/cairo/cairo-
1.14.6,
> > > > > > > but still did not see a makefile script.
> > > > > > >
> > > > > > > The attached log file documents several errors and a
> > > > > > > catastrophic failure as
> > > > > > > follows:
> > > > > > >
> > > > > > > "conftest.c(52): catastrophic error: cannot open source
file
> > > > > > > "minix/config.h"
> > > > > > > #include <minix/config.h>"
> > > > > > >
> > > > > > > I don't see the sub directory "minix" in the install
dir.
> > > > > > >
> > > > > > > Judging from the number and severity of the errors, it
seems
> > > > > > > like I have a problem with the tarball.
> > > > > > >
> > > > > > > I repeated the above starting with a new download of the
> > > > > > > same tarball and the result was the same.
> > > > > > >
> > > > > > > Is it possible I have the wrong tarball? If so, do you
have
> > > > > > > another download site to acquire this tarball or a
> > > > > > > recommendation of a more updated version that's been
tested?
> > > > > > >
> > > > > > > Do you have any suggestions on a way to resolve this
issue?
> > > > > > >
> > > > > > > Thanks.
> > > > > > >
> > > > > > > R/
> > > > > > > John
> > > > > > >
> > > > > > > Mr John W. Raby, Meteorologist U.S. Army Research
Laboratory
> > > > > > > White Sands Missile Range, NM 88002
> > > > > > > (575) 678-2004 DSN 258-2004
> > > > > > > FAX (575) 678-1230 DSN 258-1230
> > > > > > > Email: john.w.raby2.civ at mail.mil
> > > > > > >
> > > > > > >
> > > > > > >
> > > > > > > CLASSIFICATION: UNCLASSIFIED
> > > > > > >
> > > > > > >
> > > > > >
> > > > > >
> > > > > > --
> > > > > > Julie Prestopnik
> > > > > > National Center for Atmospheric Research Research
Applications
> > > > > > Laboratory
> > > > > > Phone: 303.497.8399
> > > > > > Email: jpresto at ucar.edu
> > > > > >
> > > > > >
> > > > > > CLASSIFICATION: UNCLASSIFIED
> > > > > >
> > > > > >
> > > > >
> > > > >
> > > > > --
> > > > > Julie Prestopnik
> > > > > National Center for Atmospheric Research Research
Applications
> > > > > Laboratory
> > > > > Phone: 303.497.8399
> > > > > Email: jpresto at ucar.edu
> > > > >
> > > > >
> > > > > CLASSIFICATION: UNCLASSIFIED
> > > > >
> > > > >
> > > >
> > > >
> > > > --
> > > > Julie Prestopnik
> > > > National Center for Atmospheric Research Research Applications
> > > > Laboratory
> > > > Phone: 303.497.8399
> > > > Email: jpresto at ucar.edu
> > > >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > >
> > >
> > >
> > > --
> > > Julie Prestopnik
> > > National Center for Atmospheric Research Research Applications
> > > Laboratory
> > > Phone: 303.497.8399
> > > Email: jpresto at ucar.edu
> > >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > >
> >
> >
> > --
> > Julie Prestopnik
> > National Center for Atmospheric Research Research Applications
> > Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> >
>
>
> --
> Julie Prestopnik
> National Center for Atmospheric Research Research Applications
Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
------------------------------------------------
Subject: Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
From: Raby, John W USA CIV
Time: Wed Jan 18 10:44:21 2017
CLASSIFICATION: UNCLASSIFIED
Julie -
Thanks for clarifying the issue of the paths to the libraries. I think
I will
download the ghostscript tarball and have it ready in my archive
location to
copy into the MET *data* directory when the time comes. I anticipate
using
MODE quite a bit this year and would be interested to see how the
Plot-MODE-Field tool works.
I'll proceed with the MET sw.
R/
John
-----Original Message-----
From: Julie Prestopnik via RT [mailto:met_help at ucar.edu]
Sent: Wednesday, January 18, 2017 10:28 AM
To: Raby, John W CIV USARMY RDECOM ARL (US)
<john.w.raby2.civ at mail.mil>
Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
compiling
cairo library for MET V5.2 (UNCLASSIFIED)
All active links contained in this email were disabled. Please verify
the
identity of the sender, and confirm the authenticity of all links
contained
within the message prior to copying and pasting the address to a Web
browser.
----
Hi John.
Hopefully, the MET instructions here:
Caution-
http://www.dtcenter.org/met/users/support/online_tutorial/METv5.2/tutorial.php?name=compilation&category=configure
will help you to set the correct paths to your compiled versions of
the
required libraries.
I think the only page on the tutorial that mentions ghostscript is:
Caution-
http://www.dtcenter.org/met/users/support/online_tutorial/METv5.2/tutorial.php?name=plot_mode_field&category=index
Do you plan on using the Plot-MODE-Field tool? If not, don't worry
about the
ghostscript fonts. If so, there is no compiling necessary - you'd
simply grab
the gzipped tar file from the link provided, download the data and
unpack it
in the MET *data* directory and then define the *MET_FONT_DIR
*environment
variable.
I hope that helps. I'll close this ticket. Please submit a new one
if you
have any problems with compiling MET.
Thanks,
Julie
On Wed, Jan 18, 2017 at 10:17 AM, Raby, John W USA CIV via RT <
met_help at ucar.edu> wrote:
>
> <Caution-url:
> Caution-https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79175 >
>
> CLASSIFICATION: UNCLASSIFIED
>
> Julie -
>
> After all the work accomplished so far, the prospect of moving ahead
> does sound better than trying to go backwards. I think as long as I
> can figure out how to explicitly set the correct paths to my
compiled
> version of the required
> libraries, then that would solve that problem. How about
ghostscript?
> Should
> I compile it? I think it's worth a try since I've come this far. I
> didn't see the steps for this in the tutorial.
>
> I'll follow the tutorial steps then to move forward with the MET
V5.2 sw.
>
> R/
> John
>
>
> -----Original Message-----
> From: Julie Prestopnik via RT [Caution-mailto:met_help at ucar.edu]
> Sent: Wednesday, January 18, 2017 9:47 AM
> To: Raby, John W CIV USARMY RDECOM ARL (US)
> <john.w.raby2.civ at mail.mil>
> Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> compiling cairo library for MET V5.2 (UNCLASSIFIED)
>
> All active links contained in this email were disabled. Please
verify
> the identity of the sender, and confirm the authenticity of all
links
> contained within the message prior to copying and pasting the
address
> to a Web browser.
>
>
>
>
> ----
>
> Hi John. I think you shouldn't have to dig in at this level. It
> sounds like you were making good progress installing the third party
> libraries, until you hit the problem with the version of pixman for
> Cairo. Cairo is only required for using the MODE graphics tool
which
> has limited utility.
> I would suggest moving on and trying to build MET excluding "
> *--enable-mode_graphics*" from the call to configure, so that you
> don't build the MODE graphics tool. Please let us know how that
goes.
>
> I hope that helps!
>
> Julie
>
> On Wed, Jan 18, 2017 at 9:22 AM, Raby, John W USA CIV via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <Caution-Caution-url:
> > Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=79
> > 175 >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> > Julie -
> >
> > Thanks for showing me the commands you did yesterday. This has
shown
> > that there may be existing libraries on the system which may
provide
> > the required ones for MET V5.2. I gather that something (my
> > profile?) sets this path as the default location for such
libraries
> > based on the observation we made yesterday that Cairo attempted to
> > find pixman at /usr/lib64/. I think it might be wise to at least
see
> > which of the required libraries for MET V5.2 may be at locations
on
> > the system before contacting my system admin to advise on which
will
> > require upgrade to meet the MET requirements. I'm also considering
> > learning how to modify the default paths myself to point to the
> > libraries I've compiled over the past couple of weeks, to be
> > prepared in case system admin can't help with this.
> >
> > Regards each of the required libraries that I've already compiled,
> > if I look in the install directory, where would I need to look and
> > what would I need to look for to identify the required
library/version?
> > What attribute in the filename would distinguish that version
(built
> > with Intel compiler) could I key on so that when I look on the
> > system I could spot it from all the other versions for other
> > compilers? For example, I navigated to the NetCDF version I
compiled
> > at /p/home/jraby/NetCDF/netcdf-4.1.1/lib and looked at the
contents
> > which are as follows:
> >
> > excalibur:~jraby/NetCDF/netcdf-4.1.1/lib
> > > ls
> > libnetcdf.a libnetcdf.la* libnetcdf_c++.a libnetcdf_c++.la*
> > pkgconfig/
> >
> > The version of these files is 4.4.1 based on the name of the
install
> > directory "netcdf-4.1.1".
> >
> > Then, while there, I executed the command you showed me,
> > /sbin/ldconfig -p
> > |
> > grep netcdf to show the available compiled versions of libnetcdf
> > which are present on the system. See the following subset of that
> > list which have the string "intel" in the name.
> >
> > libnetcdff_parallel_intel.so.6 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdff_parallel_intel.so.6
> > libnetcdff_parallel_intel.so.mpich31.5 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdff_parallel_intel.so.mpich31.5
> > libnetcdff_intel.so.6 (libc6,x86-64) =>
/opt/cray/lib64/libnetcdff_
> > intel.so.6
> > libnetcdff_intel.so.5 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdff_intel.so.5
> > libnetcdf_parallel_intel.so.11 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdf_parallel_intel.so.11
> > libnetcdf_parallel_intel.so.mpich31.7 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdf_parallel_intel.so.mpich31.7
> > libnetcdf_intel.so.11 (libc6,x86-64) => /opt/cray/lib64/libnetcdf_
> > intel.so.11
> > libnetcdf_intel.so.7 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdf_intel.so.7
> > libnetcdf_c++4_parallel_intel.so.mpich31.1 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdf_c++4_parallel_intel.so.mpich31.1
> > libnetcdf_c++4_intel.so.1 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdf_c++4_intel.so.1
> >
> > All the others listed are compiled ( I assume) with pgi, gnu,
cray,
> > etc by virtue of the presence of a string which contains those
> characters.
> >
> > My thought is that I have to find the intel version listed above
> > which is appropriate for my situation and then use the other
command
> > you provided yesterday to determine the version and then compare
> > that with my compiled version to see if the system has a version
at
> > least as new at mine.
> >
> > For example, using the first intel version listed above:
> > libnetcdff_parallel_intel.so.6 (libc6,x86-64) =>
> > /opt/cray/lib64/libnetcdff_parallel_intel.so.6
> >
> > ls -l /opt/cray/lib64/libnetcdff_parallel_intel.so.6 which
produced
> > the
> > following:
> >
> > lrwxrwxrwx 1 root root 83 Nov 11 2015
> > /opt/cray/lib64/libnetcdff_parallel_intel.so.6 ->
> > /opt/cray/netcdf-hdf5parallel/4.3.3.1/INTEL/14.0/lib/
> > libnetcdff_parallel_intel.so.6*
> >
> > which shows the version is 4.3.3.1? Is this the version number I'm
> > looking for?
> >
> > Is there any way to tell from the list of intel netcdf versions
> > above which ones I should choose to further determine the versions
> > for comparison with mine (4.4.1)?
> >
> > Thanks.
> >
> > R/
> > John
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> > -----Original Message-----
> > From: Julie Prestopnik via RT
> > [Caution-Caution-mailto:met_help at ucar.edu]
> > Sent: Tuesday, January 17, 2017 3:20 PM
> > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > <john.w.raby2.civ at mail.mil>
> > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175] Problem
> > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> >
> > All active links contained in this email were disabled. Please
> > verify the identity of the sender, and confirm the authenticity of
> > all links contained within the message prior to copying and
pasting
> > the address to a Web browser.
> >
> >
> >
> >
> > ----
> >
> > Yes, that sounds reasonable. I do not think that configure will
> > find the files automatically though, unless they're installed
where
> > expected.
> > You'll likely need to set LDFLAGS and CPPFLAGS to point to the
> > necessary library files and include files, respectively, either as
> > environment variables or perhaps configure would accept the
following:
> >
> > ./configure LDFLAGS=-L/shared/lib CPPFLAGS=-I/shared/include
> > ...other options...
> >
> > Again this is outside of our expertise. You might consider
> > consulting with your system administrator regarding this issue. I
hope
> > this helps.
> >
> > Julie
> >
> > On Tue, Jan 17, 2017 at 3:11 PM, Raby, John W USA CIV via RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > <Caution-Caution-Caution-url:
> > > Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > html?id=79
> > > 175 >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > > Julie -
> > >
> > > I'll give it a try and let you know the results. If it's
> > > successful, then I guess I would need to rerun the ./configure
for
> > > Cairo, but somehow point it to access my compiled version of
> > > libpixman. Does this seem reasonable to you?
> > > Maybe the configure will find it automatically? I'm not sure how
> > > that works.
> > >
> > > R/
> > > John
> > >
> > > -----Original Message-----
> > > From: Julie Prestopnik via RT
> > > [Caution-Caution-Caution-mailto:met_help at ucar.edu]
> > > Sent: Tuesday, January 17, 2017 3:02 PM
> > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > <john.w.raby2.civ at mail.mil>
> > > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
Problem
> > > compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > >
> > > All active links contained in this email were disabled. Please
> > > verify the identity of the sender, and confirm the authenticity
of
> > > all links contained within the message prior to copying and
> > > pasting the address to a Web browser.
> > >
> > >
> > >
> > >
> > > ----
> > >
> > > Hi John.
> > >
> > > This is outside my area of expertise, but I don't think it would
> > > hurt to try it.
> > >
> > > Julie
> > >
> > > On Tue, Jan 17, 2017 at 2:55 PM, Raby, John W USA CIV via RT <
> > > met_help at ucar.edu> wrote:
> > >
> > > >
> > > > <Caution-Caution-Caution-Caution-url:
> > > > Caution-Caution-Caution-Caution-
https://rt.rap.ucar.edu/rt/Ticket/Display.
> > > > html?id=79
> > > > 175 >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > > I see the following:
> > > >
> > > > Caution-Caution-Caution-Caution-
https://cairographics.org/releas
> > > > es/pixman-
> > > > 0.32.6.tar
> > > > .gz
> > > >
> > > > Could I just compile it myself using similar commands as I've
> > > > used for the other libraries?
> > > >
> > > > R/
> > > > John
> > > >
> > > >
> > > > -----Original Message-----
> > > > From: Julie Prestopnik via RT
> > > > [Caution-Caution-Caution-Caution-mailto:met_help at ucar.edu]
> > > > Sent: Tuesday, January 17, 2017 2:47 PM
> > > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > > <john.w.raby2.civ at mail.mil>
> > > > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
> > > > Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > > >
> > > > All active links contained in this email were disabled.
Please
> > > > verify the identity of the sender, and confirm the
authenticity
> > > > of all links contained within the message prior to copying and
> > > > pasting the address to a Web browser.
> > > >
> > > >
> > > >
> > > >
> > > > ----
> > > >
> > > > Hi John.
> > > >
> > > > "I didn't compile libpixman myself, so it must have been
> > > > compiled as part of the overall system by the administrators."
> > > >
> > > > Yes, I suspect that is the case. I don't have any experience
> > > > with pixman either. I hope your administrators will be able
to help.
> > > >
> > > > Julie
> > > >
> > > > On Tue, Jan 17, 2017 at 2:34 PM, Raby, John W USA CIV via RT <
> > > > met_help at ucar.edu> wrote:
> > > >
> > > > >
> > > > > <Caution-Caution-Caution-Caution-Caution-url:
> > > > > Caution-Caution-Caution-Caution-Caution-https://rt.rap.ucar.
> edu/rt/Ticket/Display.
> > > > > html?id=79
> > > > > 175 >
> > > > >
> > > > > CLASSIFICATION: UNCLASSIFIED
> > > > >
> > > > > Julie -
> > > > >
> > > > > You are correct. Thanks for catching it so quickly. See the
> > following:
> > > > >
> > > > > excalibur:~jraby/cairo
> > > > > > /sbin/ldconfig -p | grep libpixman
> > > > > libpixman-1.so.0 (libc6,x86-64) =>
> > /usr/lib64/libpixman-1.so.0
> > > > > libpixman-1.so.0 (libc6) => /usr/lib/libpixman-
1.so.0
> > > > > libpixman-1.so (libc6,x86-64) =>
> > > > > /usr/lib64/libpixman-1.so excalibur:~jraby/cairo
> > > > >
> > > > > I used the other command (ls -l) to find out the version:
> > > > >
> > > > > > ls -l /usr/lib64/libpixman-1.so
> > > > > lrwxrwxrwx 1 root root 21 Apr 7 2015
> > > > > /usr/lib64/libpixman-1.so
> > > > > ->
> > > > > libpixman-1.so.0.24.4*
> > > > > excalibur:~jraby/cairo
> > > > > > ls -l /usr/lib/libpixman-1.so.0
> > > > > lrwxrwxrwx 1 root root 21 Jan 29 2015
> > > > > /usr/lib/libpixman-1.so.0
> > > > > ->
> > > > > libpixman-1.so.0.24.4*
> > > > > excalibur:~jraby/cairo
> > > > >
> > > > > This confirms what was noted in the log file as you pointed
out.
> > > > >
> > > > > I didn't compile libpixman myself, so it must have been
> > > > > compiled as part of the overall system by the
administrators.
> > > > >
> > > > > R/
> > > > > John
> > > > >
> > > > > -----Original Message-----
> > > > > From: Julie Prestopnik via RT
> > > > > [Caution-Caution-Caution-Caution-Caution-
mailto:met_help at ucar.
> > > > > edu]
> > > > > Sent: Tuesday, January 17, 2017 2:19 PM
> > > > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > > > <john.w.raby2.civ at mail.mil>
> > > > > Subject: Re: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
> > > > > Problem compiling cairo library for MET V5.2 (UNCLASSIFIED)
> > > > >
> > > > > All active links contained in this email were disabled.
> > > > > Please verify the identity of the sender, and confirm the
> > > > > authenticity of all links contained within the message prior
> > > > > to copying and pasting the address to a Web browser.
> > > > >
> > > > >
> > > > >
> > > > >
> > > > > ----
> > > > >
> > > > > Hi John.
> > > > >
> > > > > It looks like you have "idconfig" note the "i" (lower case
i),
> > > > > but it should be "l" (lower case l).
> > > > >
> > > > > Try copying and pasting this to see if it lives in /sbin:
> > > > >
> > > > > ls /sbin/ldconfig
> > > > >
> > > > > I hope that helps!
> > > > >
> > > > > Julie
> > > > >
> > > > > On Tue, Jan 17, 2017 at 1:58 PM, Raby, John W USA CIV via RT
<
> > > > > met_help at ucar.edu> wrote:
> > > > >
> > > > > >
> > > > > > <Caution-Caution-Caution-Caution-Caution-Caution-url:
> > > > > > Caution-Caution-Caution-Caution-Caution-Caution-
https://rt.rap.ucar.
> > edu/rt/Ticket/Display.
> > > > > > html?id=79
> > > > > > 175 >
> > > > > >
> > > > > > CLASSIFICATION: UNCLASSIFIED
> > > > > >
> > > > > > Julie -
> > > > > >
> > > > > > I'm running into a brick wall trying to locate pixman on
my
> system.
> > > > > > See the following responses when attempting to use your
> > > > > > suggested
> > > > > command:
> > > > > >
> > > > > > excalibur:~jraby
> > > > > > > idconfig -p | grep libpixman
> > > > > > -bash: idconfig: command not found excalibur:~jraby
> > > > > > > /sbin/idconfig -p | grep libpixman
> > > > > > -bash: /sbin/idconfig: No such file or directory
> > > > > > excalibur:~jraby
> > > > > > > idconfig
> > > > > > If 'idconfig' is not a typo you can run the following
> > > > > > command to lookup the package that contains the binary:
> > > > > > command-not-found idconfig
> > > > > > -bash: idconfig: command not found excalibur:~jraby
> > > > > > > command-not-found idconfig
> > > > > > excalibur:~jraby
> > > > > > > which libpixman
> > > > > > which: no libpixman in
> > > > > > (/opt/intel/compilers_and_libraries_2016.0.109/linux/
> > > > > > bin/intel64:/opt/intel/compilers_and_libraries_2016.
> > > > > > 0.109/linux/mpi/intel64/bin:/opt/intel/debugger_2016/gdb/
> > > > > > intel64_mic/bin:/opt/cray/hdf5/1.8.13/bin:/opt/cray/
> > > > > > netcdf/4.3.2/bin:/opt/cray/mpt/7.1.0/gni/bin:/opt/cray/
> > > > > > rca/1.0.0-2.0502.53711.3.127.ari/bin:/opt/cray/alps/5.2.1-
> > > > > > 2.0502.9041.11.6.ari/sbin:/opt/cray/alps/5.2.1-2.0502.
> > > > > > 9041.11.6.ari/bin:/opt/cray/dvs/2.5_0.9.0-1.0502.1873.1.
> > > > > > 145.ari/bin:/opt/cray/xpmem/0.1-2.0502.55507.3.2.ari/bin:/
> > > > > > opt/cray/dmapp/7.0.1-1.0502.9501.5.219.ari/bin:/opt/cray/
> > > > > > pmi/5.0.8-1.0000.10843.170.1.ari/bin:/opt/cray/ugni/5.0-1.
> > > > > > 0502.9685.4.24.ari/bin:/opt/cray/udreg/2.3.2-1.0502.9275.
> > > > > > 1.12.ari/bin:/usr/people/PBS/SLB:/app/unsupported/BC:/usr/
> > > > > > krb5/bin:/opt/cray/ccm/default/sbin:/opt/cray/ccm/
> > > > > > default/bin:/opt/pbs/default/bin:/opt/cray/craype/2.4.1/
> > > > > > bin:/opt/cray/switch/1.0-1.0502.60522.1.61.ari/bin:/opt/
> > > > > > cray/eslogin/eswrap/1.3.3-
1.020200.1278.0/bin:/opt/modules/
> > > > > > 3.2.10.3/bin:/usr/local/bin:/usr/bin:/bin:/u
> > > > > > sr/bin/X11:/usr/X11R6/bin:/usr/games:/usr/lib64/jvm/jre/
> > > > > >
bin:/usr/lib/mit/bin:/usr/lib/mit/sbin:/sbin:/usr/sbin:/usr/
> > > > > > lib/qt3/bin:/opt/cray/bin:/usr/brl/bin:/usr/brl/bin:/usr/
> > > > > >
brl/bin:/opt/cray/netcdf/4.3.2/INTEL/140/bin:/p/home/jraby/
> > Scripts:.
> > > > > > )
> > > > > > excalibur:~jraby
> > > > > >
> > > > > > Is this something I could download and compile the same
way
> > > > > > I've been doing with the other libraries? If so what is
the
> > > > > > download site your recommend for obtaining the 0.30.0 or
> > > > > > later version?
> > > > > >
> > > > > > Thanks.
> > > > > >
> > > > > > R/
> > > > > > John
> > > > > >
> > > > > > -----Original Message-----
> > > > > > From: Julie Prestopnik via RT
> > > > > > [Caution-Caution-Caution-Caution-Caution-Caution-
mailto:met_help at ucar.
> > > > > > edu]
> > > > > > Sent: Tuesday, January 17, 2017 1:42 PM
> > > > > > To: Raby, John W CIV USARMY RDECOM ARL (US)
> > > > > > <john.w.raby2.civ at mail.mil>
> > > > > > Subject: [Non-DoD Source] Re: [rt.rap.ucar.edu #79175]
> > > > > > Problem compiling cairo library for MET V5.2
(UNCLASSIFIED)
> > > > > >
> > > > > > All active links contained in this email were disabled.
> > > > > > Please verify the identity of the sender, and confirm the
> > > > > > authenticity of all links contained within the message
prior
> > > > > > to copying and pasting the address to a Web browser.
> > > > > >
> > > > > >
> > > > > >
> > > > > >
> > > > > > ----
> > > > > >
> > > > > > Hi John. It looks like you need a newer version of
pixman.
> > > > > > The log file shows the installed pixman version is 0.24.4
> > > > > > and cairo requires
> > > > > > 0.30.0 or later version. We are using version 0.32.6.
> > > > > >
> > > > > > The log file complains two issues:
> > > > > > 1. missing header files (Makefile was generated with the
> > > > > > same errors that we have seen) 2. pixman version <==
> > > > > > "Requested
> > > > > > 'pixman-1 >= 0.30.0' but version of Pixman is 0.24.4"
> > > > > >
> > > > > > If you want to check your pixman version:
> > > > > >
> > > > > > 1: Get the library path from the following command
(check path
> > for
> > > > > > ldconfig if get "command not found" - may be in /sbin/)
> > > > > > ldconfig -p | grep libpixman
> > > > > >
> > > > > > 2. Check the version number by getting real file name
from
> > above.
> > > > For
> > > > > > example,
> > > > > > ls -l /usr/lib64/libpixman*
> > > > > >
> > > > > > I hope this helps!
> > > > > >
> > > > > > Julie
> > > > > >
> > > > > >
> > > > > >
> > > > > >
> > > > > >
> > > > > > On Tue, Jan 17, 2017 at 11:57 AM, Raby, John W USA CIV via
> > > > > > RT < met_help at ucar.edu> wrote:
> > > > > >
> > > > > > >
> > > > > > > Tue Jan 17 11:57:27 2017: Request 79175 was acted upon.
> > > > > > > Transaction: Ticket created by john.w.raby2.civ at mail.mil
> > > > > > > Queue: met_help
> > > > > > > Subject: Problem compiling cairo library for MET
V5.2
> > > > > (UNCLASSIFIED)
> > > > > > > Owner: Nobody
> > > > > > > Requestors: john.w.raby2.civ at mail.mil
> > > > > > > Status: new
> > > > > > > Ticket
> > > > > > > <Caution-Caution-Caution-Caution-Caution-Caution-
Caution-url:
> > > > > > > Caution-Caution-Caution-Caution-Caution-Caution-https:
> //rt.rap.ucar.
> > > edu/rt/Ticket/Display.
> > > > > > > html?id=79
> > > > > > > 175 >
> > > > > > >
> > > > > > >
> > > > > > > CLASSIFICATION: UNCLASSIFIED
> > > > > > >
> > > > > > > I followed the instructions in the V5.2 tutorial and
> > > > > > > downloaded/unpacked the tarball named "cairo-
1.14.6.tar.xz"
> > > > > > > from
> > > > site:
> > > > > > > Caution-Caution-Caution-Caution-Caution-Caution-https:
> //cairographics.
> > > > > > > org/releas
> > > > > > > es/
> > > > > > >
> > > > > > > After unpacking I have a configure script, but not a
> > > > > > > makefile
> > > script.
> > > > > > >
> > > > > > > I ran ./configure
> > > > > > > --prefix=/p/home/jraby/cairo/cairo-1.14.6,
> > > > > > > but still did not see a makefile script.
> > > > > > >
> > > > > > > The attached log file documents several errors and a
> > > > > > > catastrophic failure as
> > > > > > > follows:
> > > > > > >
> > > > > > > "conftest.c(52): catastrophic error: cannot open source
> > > > > > > file "minix/config.h"
> > > > > > > #include <minix/config.h>"
> > > > > > >
> > > > > > > I don't see the sub directory "minix" in the install
dir.
> > > > > > >
> > > > > > > Judging from the number and severity of the errors, it
> > > > > > > seems like I have a problem with the tarball.
> > > > > > >
> > > > > > > I repeated the above starting with a new download of the
> > > > > > > same tarball and the result was the same.
> > > > > > >
> > > > > > > Is it possible I have the wrong tarball? If so, do you
> > > > > > > have another download site to acquire this tarball or a
> > > > > > > recommendation of a more updated version that's been
tested?
> > > > > > >
> > > > > > > Do you have any suggestions on a way to resolve this
issue?
> > > > > > >
> > > > > > > Thanks.
> > > > > > >
> > > > > > > R/
> > > > > > > John
> > > > > > >
> > > > > > > Mr John W. Raby, Meteorologist U.S. Army Research
> > > > > > > Laboratory White Sands Missile Range, NM 88002
> > > > > > > (575) 678-2004 DSN 258-2004 FAX (575) 678-1230 DSN
> > > > > > > 258-1230
> > > > > > > Email: john.w.raby2.civ at mail.mil
> > > > > > >
> > > > > > >
> > > > > > >
> > > > > > > CLASSIFICATION: UNCLASSIFIED
> > > > > > >
> > > > > > >
> > > > > >
> > > > > >
> > > > > > --
> > > > > > Julie Prestopnik
> > > > > > National Center for Atmospheric Research Research
> > > > > > Applications Laboratory
> > > > > > Phone: 303.497.8399
> > > > > > Email: jpresto at ucar.edu
> > > > > >
> > > > > >
> > > > > > CLASSIFICATION: UNCLASSIFIED
> > > > > >
> > > > > >
> > > > >
> > > > >
> > > > > --
> > > > > Julie Prestopnik
> > > > > National Center for Atmospheric Research Research
Applications
> > > > > Laboratory
> > > > > Phone: 303.497.8399
> > > > > Email: jpresto at ucar.edu
> > > > >
> > > > >
> > > > > CLASSIFICATION: UNCLASSIFIED
> > > > >
> > > > >
> > > >
> > > >
> > > > --
> > > > Julie Prestopnik
> > > > National Center for Atmospheric Research Research Applications
> > > > Laboratory
> > > > Phone: 303.497.8399
> > > > Email: jpresto at ucar.edu
> > > >
> > > >
> > > > CLASSIFICATION: UNCLASSIFIED
> > > >
> > > >
> > >
> > >
> > > --
> > > Julie Prestopnik
> > > National Center for Atmospheric Research Research Applications
> > > Laboratory
> > > Phone: 303.497.8399
> > > Email: jpresto at ucar.edu
> > >
> > >
> > > CLASSIFICATION: UNCLASSIFIED
> > >
> > >
> >
> >
> > --
> > Julie Prestopnik
> > National Center for Atmospheric Research Research Applications
> > Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> >
> > CLASSIFICATION: UNCLASSIFIED
> >
> >
>
>
> --
> Julie Prestopnik
> National Center for Atmospheric Research Research Applications
> Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
>
> CLASSIFICATION: UNCLASSIFIED
>
>
--
Julie Prestopnik
National Center for Atmospheric Research Research Applications
Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
CLASSIFICATION: UNCLASSIFIED
------------------------------------------------
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