[Met_help] [rt.rap.ucar.edu #82944] History for Display with NCview from docker container
John Halley Gotway via RT
met_help at ucar.edu
Thu Dec 28 12:56:54 MST 2017
----------------------------------------------------------------
Initial Request
----------------------------------------------------------------
Hello,
I am running the met-6.0 tutorial, and noticed that ncview is available in the container. However, when I try to run from the met/met-6.0
> ncview tutorial/out/tc_dland/tc_dland_indian_ocean_one_deg.nc &
I get the following error:
Note: could not open file /root/.ncviewrc for reading
Error: Can't open display
I also get the same error with
>ncview tutorial/out/pcp_combine/sample_fcst_24L_2005080800V_12A.nc &
I have comfirmed that the data is there in both cases using ncdump. Can you explain how to run ncview in the container and output to my Windows 7 screen? (I am using the docker toolbox on Windows 7).
Thanks,
Suzanna
Suzanna C. Diener, Ph.D.
Sr. Scientist/Engineer
The Aerospace Corporation
Space-Based Sensing Division
Boulder, CO 80301
(C) 303-718-0274
(Lab) 720-622-5171
Suzanna.C.Diener at aero.org<mailto:Suzanna.C.Diener at aero.org>
Suzanna.C.Diener.ctr at mail.smil.mil<mailto:Suzanna.C.Diener.ctr at mail.smil.mil>
----------------------------------------------------------------
Complete Ticket History
----------------------------------------------------------------
Subject: Display with NCview from docker container
From: John Halley Gotway
Time: Wed Nov 08 14:43:02 2017
Suzanna,
Unfortunately, you've found one of the drawbacks of using docker
containers. The problem here is that the container isn't able to
forward
the display. If you search online, you'll find that there are some
solutions for this problem that are specific to different operating
systems
and hardware. However, there is no good, general purpose solution
that
works on all machines. I have a Mac and am not able to do this.
Perhaps
there's a solution, but whatever it is won't work on Windows.
You have a couple of options. You could research methods for
forwarding
the display on your Windows machine. If you're successful, please let
me
know how, and I'll add that info the MET website.
Another option is to get ncview running on your Windows machine
through
putty (or whatever terminal tool you're using).
And another option is to bypass ncview entirely. You could run the
plot_data_plane utility of MET which generates a PostScript image.
And
then display the PostScript image on your machine.
Here's an example of using the last option I listed:
docker run -it --rm -v /Users/johnhg/out:/out met-6.0 plot_data_plane
/met/met-6.0/out/pcp_combine/sample_fcst_12L_2005080712V_12A.nc
/out/sample_fcst_12L_2005080712V_12A.ps 'name="APCP_12";
level="(*,*)";'
OK, so this command is...
(1) executing docker *run*
(2) mounting a local "/Users/johnhg/out" directory into the container
in
"/out".
(3) specifying the plot_data_plane command to run
After I run this command, I have the following output file on my
machine:
/Users/johnhg/out/sample_fcst_12L_2005080712V_12A.ps
John
On Wed, Nov 8, 2017 at 8:35 AM, Suzanna C Diener via RT
<met_help at ucar.edu>
wrote:
>
> Wed Nov 08 08:35:18 2017: Request 82944 was acted upon.
> Transaction: Ticket created by suzanna.c.diener at aero.org
> Queue: met_help
> Subject: Display with NCview from docker container
> Owner: Nobody
> Requestors: suzanna.c.diener at aero.org
> Status: new
> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=82944 >
>
>
> Hello,
>
> I am running the met-6.0 tutorial, and noticed that ncview is
available in
> the container. However, when I try to run from the met/met-6.0
>
> > ncview tutorial/out/tc_dland/tc_dland_indian_ocean_one_deg.nc &
>
> I get the following error:
>
> Note: could not open file /root/.ncviewrc for reading
> Error: Can't open display
>
> I also get the same error with
>
> >ncview tutorial/out/pcp_combine/sample_fcst_24L_2005080800V_12A.nc
&
>
> I have comfirmed that the data is there in both cases using ncdump.
Can
> you explain how to run ncview in the container and output to my
Windows 7
> screen? (I am using the docker toolbox on Windows 7).
>
> Thanks,
>
> Suzanna
> Suzanna C. Diener, Ph.D.
> Sr. Scientist/Engineer
> The Aerospace Corporation
> Space-Based Sensing Division
> Boulder, CO 80301
>
> (C) 303-718-0274
> (Lab) 720-622-5171
> Suzanna.C.Diener at aero.org<mailto:Suzanna.C.Diener at aero.org>
> Suzanna.C.Diener.ctr at mail.smil.mil<mailto:Suzanna.C.Diener.
> ctr at mail.smil.mil>
>
>
>
------------------------------------------------
Subject: RE: [rt.rap.ucar.edu #82944] Display with NCview from docker container
From: Suzanna C Diener
Time: Thu Dec 07 08:53:02 2017
Thank you. I was able to generate the PS file.
-----Original Message-----
From: John Halley Gotway via RT [mailto:met_help at ucar.edu]
Sent: Wednesday, November 08, 2017 2:43 PM
To: Suzanna C Diener <suzanna.c.diener at aero.org>
Subject: Re: [rt.rap.ucar.edu #82944] Display with NCview from docker
container
Suzanna,
Unfortunately, you've found one of the drawbacks of using docker
containers. The problem here is that the container isn't able to
forward the display. If you search online, you'll find that there are
some solutions for this problem that are specific to different
operating systems and hardware. However, there is no good, general
purpose solution that works on all machines. I have a Mac and am not
able to do this. Perhaps there's a solution, but whatever it is won't
work on Windows.
You have a couple of options. You could research methods for
forwarding the display on your Windows machine. If you're successful,
please let me know how, and I'll add that info the MET website.
Another option is to get ncview running on your Windows machine
through putty (or whatever terminal tool you're using).
And another option is to bypass ncview entirely. You could run the
plot_data_plane utility of MET which generates a PostScript image.
And then display the PostScript image on your machine.
Here's an example of using the last option I listed:
docker run -it --rm -v /Users/johnhg/out:/out met-6.0 plot_data_plane
/met/met-6.0/out/pcp_combine/sample_fcst_12L_2005080712V_12A.nc
/out/sample_fcst_12L_2005080712V_12A.ps 'name="APCP_12";
level="(*,*)";'
OK, so this command is...
(1) executing docker *run*
(2) mounting a local "/Users/johnhg/out" directory into the container
in "/out".
(3) specifying the plot_data_plane command to run
After I run this command, I have the following output file on my
machine:
/Users/johnhg/out/sample_fcst_12L_2005080712V_12A.ps
John
On Wed, Nov 8, 2017 at 8:35 AM, Suzanna C Diener via RT
<met_help at ucar.edu>
wrote:
>
> Wed Nov 08 08:35:18 2017: Request 82944 was acted upon.
> Transaction: Ticket created by suzanna.c.diener at aero.org
> Queue: met_help
> Subject: Display with NCview from docker container
> Owner: Nobody
> Requestors: suzanna.c.diener at aero.org
> Status: new
> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=82944
> >
>
>
> Hello,
>
> I am running the met-6.0 tutorial, and noticed that ncview is
> available in the container. However, when I try to run from the
> met/met-6.0
>
> > ncview tutorial/out/tc_dland/tc_dland_indian_ocean_one_deg.nc &
>
> I get the following error:
>
> Note: could not open file /root/.ncviewrc for reading
> Error: Can't open display
>
> I also get the same error with
>
> >ncview tutorial/out/pcp_combine/sample_fcst_24L_2005080800V_12A.nc
&
>
> I have comfirmed that the data is there in both cases using ncdump.
> Can you explain how to run ncview in the container and output to my
> Windows 7 screen? (I am using the docker toolbox on Windows 7).
>
> Thanks,
>
> Suzanna
> Suzanna C. Diener, Ph.D.
> Sr. Scientist/Engineer
> The Aerospace Corporation
> Space-Based Sensing Division
> Boulder, CO 80301
>
> (C) 303-718-0274
> (Lab) 720-622-5171
> Suzanna.C.Diener at aero.org<mailto:Suzanna.C.Diener at aero.org>
> Suzanna.C.Diener.ctr at mail.smil.mil<mailto:Suzanna.C.Diener.
> ctr at mail.smil.mil>
>
>
>
------------------------------------------------
Subject: Display with NCview from docker container
From: John Halley Gotway
Time: Thu Dec 07 09:16:16 2017
Suzanna,
Great, thanks for letting me know. I'll go ahead and resolve this
ticket.
John
On Thu, Dec 7, 2017 at 8:53 AM, Suzanna C Diener via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=82944 >
>
> Thank you. I was able to generate the PS file.
>
> -----Original Message-----
> From: John Halley Gotway via RT [mailto:met_help at ucar.edu]
> Sent: Wednesday, November 08, 2017 2:43 PM
> To: Suzanna C Diener <suzanna.c.diener at aero.org>
> Subject: Re: [rt.rap.ucar.edu #82944] Display with NCview from
docker
> container
>
> Suzanna,
>
> Unfortunately, you've found one of the drawbacks of using docker
> containers. The problem here is that the container isn't able to
forward
> the display. If you search online, you'll find that there are some
> solutions for this problem that are specific to different operating
systems
> and hardware. However, there is no good, general purpose solution
that
> works on all machines. I have a Mac and am not able to do this.
Perhaps
> there's a solution, but whatever it is won't work on Windows.
>
> You have a couple of options. You could research methods for
forwarding
> the display on your Windows machine. If you're successful, please
let me
> know how, and I'll add that info the MET website.
>
> Another option is to get ncview running on your Windows machine
through
> putty (or whatever terminal tool you're using).
>
> And another option is to bypass ncview entirely. You could run the
> plot_data_plane utility of MET which generates a PostScript image.
And
> then display the PostScript image on your machine.
>
> Here's an example of using the last option I listed:
>
> docker run -it --rm -v /Users/johnhg/out:/out met-6.0
plot_data_plane
> /met/met-6.0/out/pcp_combine/sample_fcst_12L_2005080712V_12A.nc
> /out/sample_fcst_12L_2005080712V_12A.ps 'name="APCP_12";
level="(*,*)";'
> OK, so this command is...
> (1) executing docker *run*
> (2) mounting a local "/Users/johnhg/out" directory into the
container in
> "/out".
> (3) specifying the plot_data_plane command to run
>
> After I run this command, I have the following output file on my
machine:
> /Users/johnhg/out/sample_fcst_12L_2005080712V_12A.ps
>
> John
>
>
> On Wed, Nov 8, 2017 at 8:35 AM, Suzanna C Diener via RT
<met_help at ucar.edu
> >
> wrote:
>
> >
> > Wed Nov 08 08:35:18 2017: Request 82944 was acted upon.
> > Transaction: Ticket created by suzanna.c.diener at aero.org
> > Queue: met_help
> > Subject: Display with NCview from docker container
> > Owner: Nobody
> > Requestors: suzanna.c.diener at aero.org
> > Status: new
> > Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=82944
> > >
> >
> >
> > Hello,
> >
> > I am running the met-6.0 tutorial, and noticed that ncview is
> > available in the container. However, when I try to run from the
> > met/met-6.0
> >
> > > ncview tutorial/out/tc_dland/tc_dland_indian_ocean_one_deg.nc &
> >
> > I get the following error:
> >
> > Note: could not open file /root/.ncviewrc for reading
> > Error: Can't open display
> >
> > I also get the same error with
> >
> > >ncview
tutorial/out/pcp_combine/sample_fcst_24L_2005080800V_12A.nc &
> >
> > I have comfirmed that the data is there in both cases using
ncdump.
> > Can you explain how to run ncview in the container and output to
my
> > Windows 7 screen? (I am using the docker toolbox on Windows 7).
> >
> > Thanks,
> >
> > Suzanna
> > Suzanna C. Diener, Ph.D.
> > Sr. Scientist/Engineer
> > The Aerospace Corporation
> > Space-Based Sensing Division
> > Boulder, CO 80301
> >
> > (C) 303-718-0274
> > (Lab) 720-622-5171
> > Suzanna.C.Diener at aero.org<mailto:Suzanna.C.Diener at aero.org>
> > Suzanna.C.Diener.ctr at mail.smil.mil<mailto:Suzanna.C.Diener.
> > ctr at mail.smil.mil>
> >
> >
> >
>
>
>
>
------------------------------------------------
Subject: RE: [rt.rap.ucar.edu #82944] Display with NCview from docker container
From: Suzanna C Diener
Time: Wed Dec 27 07:35:21 2017
John,
Thanks for your email on Displaying images from Docker containers.
I ended up using the solution, converting the *.nc file to *.ps and
sending it to my local machine.
I am still on the lookout for alternatives, but this one worked
nicely.
The longest pole in this task was finding the correct UPP output file
containing the APCP field... which a colleague had in a different
directory path, than I was looking in....
Anyway, it is all working, now!!!!
Happy New Year!
Suzanna
Suzanna C. Diener, Ph.D.
Sr. Scientist/Engineer
The Aerospace Corporation
Space-Based Sensing Division
Boulder, CO 80301
(W) 303-718-0274
Suzanna.C.Diener at aero.org
-----Original Message-----
From: John Halley Gotway via RT [mailto:met_help at ucar.edu]
Sent: Wednesday, November 08, 2017 2:43 PM
To: Suzanna C Diener <suzanna.c.diener at aero.org>
Subject: Re: [rt.rap.ucar.edu #82944] Display with NCview from docker
container
Suzanna,
Unfortunately, you've found one of the drawbacks of using docker
containers. The problem here is that the container isn't able to
forward the display. If you search online, you'll find that there are
some solutions for this problem that are specific to different
operating systems and hardware. However, there is no good, general
purpose solution that works on all machines. I have a Mac and am not
able to do this. Perhaps there's a solution, but whatever it is won't
work on Windows.
You have a couple of options. You could research methods for
forwarding the display on your Windows machine. If you're successful,
please let me know how, and I'll add that info the MET website.
Another option is to get ncview running on your Windows machine
through putty (or whatever terminal tool you're using).
And another option is to bypass ncview entirely. You could run the
plot_data_plane utility of MET which generates a PostScript image.
And then display the PostScript image on your machine.
Here's an example of using the last option I listed:
docker run -it --rm -v /Users/johnhg/out:/out met-6.0 plot_data_plane
/met/met-6.0/out/pcp_combine/sample_fcst_12L_2005080712V_12A.nc
/out/sample_fcst_12L_2005080712V_12A.ps 'name="APCP_12";
level="(*,*)";'
OK, so this command is...
(1) executing docker *run*
(2) mounting a local "/Users/johnhg/out" directory into the container
in "/out".
(3) specifying the plot_data_plane command to run
After I run this command, I have the following output file on my
machine:
/Users/johnhg/out/sample_fcst_12L_2005080712V_12A.ps
John
On Wed, Nov 8, 2017 at 8:35 AM, Suzanna C Diener via RT
<met_help at ucar.edu>
wrote:
>
> Wed Nov 08 08:35:18 2017: Request 82944 was acted upon.
> Transaction: Ticket created by suzanna.c.diener at aero.org
> Queue: met_help
> Subject: Display with NCview from docker container
> Owner: Nobody
> Requestors: suzanna.c.diener at aero.org
> Status: new
> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=82944
> >
>
>
> Hello,
>
> I am running the met-6.0 tutorial, and noticed that ncview is
> available in the container. However, when I try to run from the
> met/met-6.0
>
> > ncview tutorial/out/tc_dland/tc_dland_indian_ocean_one_deg.nc &
>
> I get the following error:
>
> Note: could not open file /root/.ncviewrc for reading
> Error: Can't open display
>
> I also get the same error with
>
> >ncview tutorial/out/pcp_combine/sample_fcst_24L_2005080800V_12A.nc
&
>
> I have comfirmed that the data is there in both cases using ncdump.
> Can you explain how to run ncview in the container and output to my
> Windows 7 screen? (I am using the docker toolbox on Windows 7).
>
> Thanks,
>
> Suzanna
> Suzanna C. Diener, Ph.D.
> Sr. Scientist/Engineer
> The Aerospace Corporation
> Space-Based Sensing Division
> Boulder, CO 80301
>
> (C) 303-718-0274
> (Lab) 720-622-5171
> Suzanna.C.Diener at aero.org<mailto:Suzanna.C.Diener at aero.org>
> Suzanna.C.Diener.ctr at mail.smil.mil<mailto:Suzanna.C.Diener.
> ctr at mail.smil.mil>
>
>
>
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