[Met_help] [rt.rap.ucar.edu #47435] History for Problem of running MODE Tool (convex_hull)
mmkamal at uwaterloo.ca
mmkamal at uwaterloo.ca
Fri Jun 17 15:17:49 MDT 2011
Hi Paul,
Currently I am trying to generate some data set as per your advise
beside I have sent a mail the Sabrina (who had faced the same problem
with PGI compiler earlier of this year) but she replied me thay she is
could not solve the problem yet. Below is the configuration file, used
module and system description of mine:
============================================================================
gpc-f101n084-$ uname -a
Linux gpc-f101n084 2.6.18-194.32.1.el5 #1 SMP Wed Jan 5 17:52:25 EST
2011 x86_64 x86_64 x86_64 GNU/Linux
gpc-f101n084-$ module list
Currently Loaded Modulefiles:
1) openmpi/1.4.1-intel-v11.0-ofed 3) intel/intel-v11.1.056
5) netcdf/4.0.1_shared
2) fftw/2.1.5-intel-openmpi 4) hdf5/184-p1-v18-serial
6) gsl/1.13-intel
=========================================================================
METv3.0.1 Makefile
=========================================================================
# Path to GNU Make command
MAKE = /usr/bin/make
# Architecture flags
ARCH_FLAGS = -DBLOCK4
# Path to the C++ Compiler
# C++ compiler flags
# Any additional required libraries
CXX = icpc
CXX_FLAGS = -Wall -Wshadow -static # -g
CXX_LIBS =
# Path to the Fortran Compiler
# Fortran compiler flags
# Any additional required libraries
FC = ifort
FC_FLAGS = -static # -g
FC_LIBS = -lifcore
# Make print options
PRINT_OPTS = --no-print-directory
# Top level directory for the NetCDF library
# NetCDF include directory specified as: -I/your/include/path
# NetCDF library directory specified as: -L/your/library/path
NETCDF_BASE = $(SCINET_NETCDF_BASE)
NETCDF_INCS = -I$(NETCDF_BASE)/include -I$(SCINET_HDF5_INC)
NETCDF_LIBS = -L$(NETCDF_BASE)/lib -L$(SCINET_HDF5_LIB) -lnetcdf_c++
-lnetcdf -lhdf5_hl_cpp -lhdf5_hl -lhdf5 -lsz -lz
# Top level directory for BUFRLIB
# BUFRLIB include directory specified as: -I/your/include/path
# BUFRLIB library directory specified as: -L/your/library/path
BUFR_BASE = /home/amen/src/bufrlib
BUFR_INCS = -I/home/amen/src/bufrlib
BUFR_LIBS = -L/home/amen/src/bufrlib
# Top level directory for the GNU Scientific Library (GSL) if it's not
# installed in a standard location.
# GSL include directory specified as: -I/your/include/path
# GSL library directory specified as: -L/your/library/path
GSL_BASE = $(SCINET_GSL_BASE)
GSL_INCS = -I$(GSL_BASE)/include
GSL_LIBS = -L$(GSL_BASE)/lib
# Top level directory for the F2C or G2C Library if it's not installed in a
# standard location.
# F2C include directory specified as: -I/your/include/path
# F2C library directory containing libf2c.a or libg2c.a and specified as:
# -L/your/library/path
# Name of the library to be used: -lf2c or -lg2c
# NOTE: Not typically required for the Intel ifort Fortran compiler
F2C_BASE =
F2C_INCS =
F2C_LIBS =
F2C_LIBNAME =
# Optional flags to disable the compilation of MET tools
# Specify a non-zero value to disable the compilation of the tool
DISABLE_PCP_COMBINE = 0
DISABLE_GEN_POLY_MASK = 0
DISABLE_MODE = 0
DISABLE_GRID_STAT = 0
DISABLE_PB2NC = 0
DISABLE_ASCII2NC = 0
DISABLE_POINT_STAT = 0
DISABLE_WAVELET_STAT = 0
DISABLE_ENSEMBLE_STAT = 0
DISABLE_STAT_ANALYSIS = 0
DISABLE_MODE_ANALYSIS = 0
DISABLE_TOOLS = 1
###############################################################################
#
# End Variables to be modified before building
#
###############################################################################
###############################################################################
#
# Export variables to be used by submakes
#
###############################################################################
export MAKE
export ARCH_FLAGS
export CXX
export CXX_FLAGS
export CXX_LIBS
export FC
export FC_FLAGS
export FC_LIBS
export NETCDF_INCS
export NETCDF_LIBS
export BUFR_INCS
export BUFR_LIBS
export GSL_INCS
export GSL_LIBS
export F2C_INCS
export F2C_LIBS
export F2C_LIBNAME
# Top level directory for the MET build
MET_BASE = ${PWD}
export MET_BASE
=======================================================================
Thanks
Kamal
Quoting RAL HelpDesk {for Paul Oldenburg} <met_help at ucar.edu>:
> ----------------------------------------------------------------
> Initial Request
> ----------------------------------------------------------------
>
>
> Hello,
>
>
> I have started learning MET and finish all the steps of MET on-line
> tutorial until MODE Tool. While I am trying to run MODE tool I get the
> following error message: I have look through the MET archive and find
> that someone also posted same problem on April 2011 and a series of
> discussion took place with no end solution. Could anybody please tell
> me how to solve the problem.
>
> ======================================================
> Error message I get
> ======================================================
>
> gpc-f101n084-$ bin/mode \
>> tutorial/out/pcp_combine/sample_fcst_24L_2005080800V_12A.nc \
>> tutorial/out/pcp_combine/sample_obs_2005080800V_12A.nc \
>> tutorial/config/WrfModeConfig_tutorial \
>> -outdir tutorial/out/mode \
>> -v 2
> Forecast File: tutorial/out/pcp_combine/sample_fcst_24L_2005080800V_12A.nc
> Observation File: tutorial/out/pcp_combine/sample_obs_2005080800V_12A.nc
> Match Config File: tutorial/config/WrfModeConfig_tutorial
> Merge Config File: tutorial/config/WrfModeConfig_tutorial
> Forecast Field: APCP_12 at A12
> Observation Field: APCP_12 at A12
> Identifying objects in the forecast and observation fields...
> Computing contingency table statistics...
> Identified: 5 forecast objects and 6 observation objects.
> Performing merging (no merging) in the forecast field.
> Performing merging (no merging) in the observation field.
> Remaining: 5 forecast objects and 6 observation objects.
> Performing matching between the forecast and observation fields.
>
>
> ERROR: convex_hull(Polyline &) -> can't find next hull point
>
>
>
> Thanks in advance
>
> Kamal
> PhD Student
> Department of Earth and Environmental Sciences
> University of Waterloo, Canada
>
>
>
>
>
>
>
>
>
> ----------------------------------------------------------------
> Complete Ticket History
> ----------------------------------------------------------------
>
> Subject: Re: [rt.rap.ucar.edu #47435] Problem of running MODE Tool
> (convex_hull)
> From: Paul Oldenburg
> Time: Thu Jun 09 09:12:27 2011
>
> Randy,
>
> Can you please take a look at this user's MET help question? I think
> it is a situation that we have seen before, right?
> Basically there is a numerical problem with some compilers as MET is
> trying to build the convex hull of an object in
> the tutorial data that we distribute. I don't remember if or how we
> were able to resolve this problem.
>
> Thanks,
>
> Paul
>
>
> On 06/08/2011 03:50 PM, RAL HelpDesk {for mmkamal} wrote:
>>
>> Wed Jun 08 15:50:10 2011: Request 47435 was acted upon.
>> Transaction: Ticket created by mmkamal at uwaterloo.ca
>> Queue: met_help
>> Subject: Problem of running MODE Tool (convex_hull)
>> Owner: Nobody
>> Requestors: mmkamal at uwaterloo.ca
>> Status: new
>> Ticket <URL:
> https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=47435 >
>>
>>
>>
>> Hello,
>>
>>
>> I have started learning MET and finish all the steps of MET on-line
>> tutorial until MODE Tool. While I am trying to run MODE tool I get
> the
>> following error message: I have look through the MET archive and
> find
>> that someone also posted same problem on April 2011 and a series of
>> discussion took place with no end solution. Could anybody please
> tell
>> me how to solve the problem.
>>
>> ======================================================
>> Error message I get
>> ======================================================
>>
>> gpc-f101n084-$ bin/mode \
>>> tutorial/out/pcp_combine/sample_fcst_24L_2005080800V_12A.nc \
>>> tutorial/out/pcp_combine/sample_obs_2005080800V_12A.nc \
>>> tutorial/config/WrfModeConfig_tutorial \
>>> -outdir tutorial/out/mode \
>>> -v 2
>> Forecast File:
> tutorial/out/pcp_combine/sample_fcst_24L_2005080800V_12A.nc
>> Observation File:
> tutorial/out/pcp_combine/sample_obs_2005080800V_12A.nc
>> Match Config File: tutorial/config/WrfModeConfig_tutorial
>> Merge Config File: tutorial/config/WrfModeConfig_tutorial
>> Forecast Field: APCP_12 at A12
>> Observation Field: APCP_12 at A12
>> Identifying objects in the forecast and observation fields...
>> Computing contingency table statistics...
>> Identified: 5 forecast objects and 6 observation objects.
>> Performing merging (no merging) in the forecast field.
>> Performing merging (no merging) in the observation field.
>> Remaining: 5 forecast objects and 6 observation objects.
>> Performing matching between the forecast and observation fields.
>>
>>
>> ERROR: convex_hull(Polyline &) -> can't find next hull point
>>
>>
>>
>> Thanks in advance
>>
>> Kamal
>> PhD Student
>> Department of Earth and Environmental Sciences
>> University of Waterloo, Canada
>>
>>
>>
>>
>>
>>
>>
>
>
> ------------------------------------------------
> Subject: Re: [rt.rap.ucar.edu #47435] Problem of running MODE Tool
> (convex_hull)
> From: Paul Oldenburg
> Time: Thu Jun 09 11:27:05 2011
>
> Kamal,
>
> Can you please send me information about the compiler and operating
> system that you are running MODE on? We have seen
> this behavior before from MODE, but we do not know what causes it.
> Please try to run MODE on some other test data that
> is not part of the tutorial data sample and, if the same error occurs,
> please send us the test data. I'm sorry I don't
> have a better answer for you at this time.
>
> Paul
>
>
> On 06/08/2011 03:50 PM, RAL HelpDesk {for mmkamal} wrote:
>>
>> Wed Jun 08 15:50:10 2011: Request 47435 was acted upon.
>> Transaction: Ticket created by mmkamal at uwaterloo.ca
>> Queue: met_help
>> Subject: Problem of running MODE Tool (convex_hull)
>> Owner: Nobody
>> Requestors: mmkamal at uwaterloo.ca
>> Status: new
>> Ticket <URL:
> https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=47435 >
>>
>>
>>
>> Hello,
>>
>>
>> I have started learning MET and finish all the steps of MET on-line
>> tutorial until MODE Tool. While I am trying to run MODE tool I get
> the
>> following error message: I have look through the MET archive and
> find
>> that someone also posted same problem on April 2011 and a series of
>> discussion took place with no end solution. Could anybody please
> tell
>> me how to solve the problem.
>>
>> ======================================================
>> Error message I get
>> ======================================================
>>
>> gpc-f101n084-$ bin/mode \
>>> tutorial/out/pcp_combine/sample_fcst_24L_2005080800V_12A.nc \
>>> tutorial/out/pcp_combine/sample_obs_2005080800V_12A.nc \
>>> tutorial/config/WrfModeConfig_tutorial \
>>> -outdir tutorial/out/mode \
>>> -v 2
>> Forecast File:
> tutorial/out/pcp_combine/sample_fcst_24L_2005080800V_12A.nc
>> Observation File:
> tutorial/out/pcp_combine/sample_obs_2005080800V_12A.nc
>> Match Config File: tutorial/config/WrfModeConfig_tutorial
>> Merge Config File: tutorial/config/WrfModeConfig_tutorial
>> Forecast Field: APCP_12 at A12
>> Observation Field: APCP_12 at A12
>> Identifying objects in the forecast and observation fields...
>> Computing contingency table statistics...
>> Identified: 5 forecast objects and 6 observation objects.
>> Performing merging (no merging) in the forecast field.
>> Performing merging (no merging) in the observation field.
>> Remaining: 5 forecast objects and 6 observation objects.
>> Performing matching between the forecast and observation fields.
>>
>>
>> ERROR: convex_hull(Polyline &) -> can't find next hull point
>>
>>
>>
>> Thanks in advance
>>
>> Kamal
>> PhD Student
>> Department of Earth and Environmental Sciences
>> University of Waterloo, Canada
>>
>>
>>
>>
>>
>>
>>
>
>
> ------------------------------------------------
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