[Dart-dev] DART/branches Revision: 12392

[dart at ucar.edu]

thoar at ucar.edu
2018-02-01 17:07:33 -0700 (Thu, 01 Feb 2018)
357
More extensive list of variables to be part of the DART state.
Lots of these are from Andy Fox, and I am dragging some snow variables
along as well.   Some of the variables have changed names from clm4.0 to clm5.0
and some of the clm4 variable names can be specified to appear in the vector history file
(like frac_sno, which is a no_copy_back anyway ...)




Modified: DART/branches/cesm_clm/models/clm/work/input.nml
===================================================================
--- DART/branches/cesm_clm/models/clm/work/input.nml	2018-02-01 23:27:19 UTC (rev 12391)
+++ DART/branches/cesm_clm/models/clm/work/input.nml	2018-02-02 00:07:33 UTC (rev 12392)
@@ -1,26 +1,26 @@
 &perfect_model_obs_nml
-   read_input_state_from_file = .true.,
-   write_output_state_to_file = .false.,
-   async                      = 0,
-   init_time_days             = -1,
-   init_time_seconds          = -1,
-   first_obs_days             = -1,
-   first_obs_seconds          = -1,
-   last_obs_days              = -1,
-   last_obs_seconds           = -1,
-   output_interval            = 1,
+   read_input_state_from_file = .true.
+   write_output_state_to_file = .false.
+   async                      =  0
+   init_time_days             = -1
+   init_time_seconds          = -1
+   first_obs_days             = -1
+   first_obs_seconds          = -1
+   last_obs_days              = -1
+   last_obs_seconds           = -1
+   output_interval            =  1
    single_file_in             = .false.
    single_file_out            = .false.
    input_state_files          = 'clm_restart.nc', 'clm_history.nc', 'clm_vector_history.nc'
    output_state_files         = 'restart_out.nc', 'history_out.nc', 'vector_history_out.nc'
-   obs_seq_in_file_name       = "obs_seq.in",
-   obs_seq_out_file_name      = "obs_seq.out",
-   adv_ens_command            = "../shell_scripts/advance_model.csh",
-   output_timestamps          = .false.,
-   trace_execution            = .true.,
-   output_forward_op_errors   = .false.,
-   print_every_nth_obs        = -1,
-   silence                    = .false.,
+   obs_seq_in_file_name       = "obs_seq.in"
+   obs_seq_out_file_name      = "obs_seq.out"
+   adv_ens_command            = "no_advance_script"
+   output_timestamps          = .false.
+   trace_execution            = .true.
+   output_forward_op_errors   = .false.
+   print_every_nth_obs        = -1
+   silence                    = .false.
    /
 
 &filter_nml
@@ -29,12 +29,12 @@
    ens_size                 = 3
    obs_sequence_in_name     = "obs_seq.1000obs"
    obs_sequence_out_name    = "obs_seq.final"
-   input_state_file_list    = "restart_files.txt", 
-                              "history_files.txt"
-                              "history_vector_files.txt", 
-   output_state_file_list   = "restart_files_out.txt", 
-                              "history_files_out.txt" 
-                              "history_vector_files_out.txt", 
+   input_state_file_list    = "restart_files.txt",
+                              "history_files.txt",
+                              "history_vector_files.txt" 
+   output_state_file_list   = "restart_files.txt",
+                              "history_files.txt",
+                              "history_vector_files.txt" 
    init_time_days           = -1
    init_time_seconds        = -1
    first_obs_days           = -1
@@ -49,7 +49,7 @@
    output_timestamps        = .true.
    trace_execution          = .true.
    silence                  = .false.
-   
+
    stages_to_write          = 'preassim', 'output'
    output_members           = .true.
    output_mean              = .true.
@@ -182,23 +182,38 @@
    assimilation_period_seconds  = 3600
    calendar                     = 'Gregorian'
    debug                        = 0
-   clm_variables  = 'frac_sno',    'QTY_SNOWCOVER_FRAC',         'NA' , 'NA', 'restart' , 'NO_COPY_BACK',
-                    'H2OSNO',      'QTY_SNOW_WATER',             '0.0', 'NA', 'restart' , 'UPDATE',
+   clm_variables  = 'frootc',      'QTY_ROOT_CARBON',            '0.0', 'NA', 'restart' , 'UPDATE',
+                    'leafc',       'QTY_LEAF_CARBON',            '0.0', 'NA', 'restart' , 'UPDATE',
+                    'LAI240_VALUE','QTY_LEAF_AREA_INDEX',        '0.0', 'NA', 'restart' , 'NO_COPY_BACK',
+                    'leafn',       'QTY_LEAF_NITROGEN',          '0.0', 'NA', 'restart' , 'UPDATE',
+                    'livecrootc',  'QTY_ROOT_CARBON',            '0.0', 'NA', 'restart' , 'UPDATE',
+                    'deadcrootc',  'QTY_ROOT_CARBON',            '0.0', 'NA', 'restart' , 'UPDATE',
+                    'livestemc',   'QTY_ROOT_CARBON',            '0.0', 'NA', 'restart' , 'UPDATE',
+                    'deadstemc',   'QTY_STEM_CARBON',            '0.0', 'NA', 'restart' , 'UPDATE',
+                    'frootn',      'QTY_ROOT_NITROGEN',          '0.0', 'NA', 'restart' , 'UPDATE',
+                    'livecrootn',  'QTY_ROOT_NITROGEN',          '0.0', 'NA', 'restart' , 'UPDATE',
+                    'deadcrootn',  'QTY_ROOT_NITROGEN',          '0.0', 'NA', 'restart' , 'UPDATE',
+                    'livestemn',   'QTY_STEM_NITROGEN',          '0.0', 'NA', 'restart' , 'UPDATE',
+                    'deadstemn',   'QTY_STEM_NITROGEN',          '0.0', 'NA', 'restart' , 'UPDATE',
                     'H2OSOI_LIQ',  'QTY_SOIL_MOISTURE',          '0.0', 'NA', 'restart' , 'UPDATE',
-                    'H2OSOI_ICE',  'QTY_ICE',                    '0.0', 'NA', 'restart' , 'UPDATE',
                     'T_SOISNO',    'QTY_SOIL_TEMPERATURE',       'NA' , 'NA', 'restart' , 'UPDATE',
-                    'SNOWDP',      'QTY_SNOW_THICKNESS',         'NA' , 'NA', 'restart' , 'UPDATE',
-                    'LAIP_VALUE',  'QTY_LEAF_AREA_INDEX',        'NA' , 'NA', 'restart' , 'NO_COPY_BACK',