[Dart-dev] DART/branches Revision: 12391

[dart at ucar.edu]

thoar at ucar.edu
2018-02-01 16:27:19 -0700 (Thu, 01 Feb 2018)
200
Renaming the setup_ensemble to setup_startup, since it has always done
a 'startup' run (all instances from a single canned source).

The 'hybrid' run allows us to stage an already spun-up ensemble.





Deleted: DART/branches/cesm_clm/models/clm/shell_scripts/cesm2_0/CESM2_0_setup_ensemble
===================================================================
--- DART/branches/cesm_clm/models/clm/shell_scripts/cesm2_0/CESM2_0_setup_ensemble	2018-02-01 23:20:16 UTC (rev 12390)
+++ DART/branches/cesm_clm/models/clm/shell_scripts/cesm2_0/CESM2_0_setup_ensemble	2018-02-01 23:27:19 UTC (rev 12391)
@@ -1,457 +0,0 @@
-#!/bin/csh
-#
-# DART software - Copyright UCAR. This open source software is provided
-# provided by UCAR, "as is", without charge, subject to all terms of use at
-# http://www.image.ucar.edu/DAReS/DART/DART_download
-#
-# DART $Id$
-
-#-----------------------------------------------------------------------
-# Purpose, describe things here, etc.
-#-----------------------------------------------------------------------
-
-# ==============================================================================
-# Options defining the experiment:
-#
-# CASE          The value of "CASE" will be used many ways; directory and file
-#               names both locally and (possibly) on the HPSS, and script names;
-#               so consider its length and information content.
-# compset       Defines the vertical resolution and physics packages to be used.
-#               Must be a standard CESM compset; see the CESM documentation.
-# resolution    Defines the horizontal resolution and dynamics; see CESM docs.
-# cesmtag       The version of the CESM source code to use when building the code.
-# num_instances The number of ensemble members.
-# ==============================================================================
-
-setenv CASE           clm5_startup_2
-setenv resolution     f09_g16
-setenv compset        I2000Clm50BgcCrop
-setenv compset        2000_DATM%GSWP3v1_CLM50%BGC-CROP_SICE_SOCN_MOSART_SGLC_SWAV
-setenv cesmtag        clm_dev_branch
-setenv num_instances  4
-
-# ==============================================================================
-# Directories:
-# cesmdata        Location of some supporting CESM data files.
-# cesmroot        Location of the CESM code base.  This version of the script
-#                 only supports version cesm1_5_beta06c.
-# caseroot        Defines the CESM case directory - where the CESM+DART
-#                 configuration files will be stored.  This should probably not
-#                 be in scratch (on yellowstone, your 'work' partition is suggested).
-#                 This script will delete any existing caseroot, so this script,
-#                 and other useful things should be kept elsewhere.
-# rundir          Defines the location of the CESM run directory.  Will need large
-#                 amounts of disk space, generally on a scratch partition.
-# exeroot         Defines the location of the CESM executable directory , where the
-#                 CESM executables will be built.  Medium amount of space
-#                 needed, generally on a scratch partition.
-# archdir         Defines the location of the CESM short-term archive directories.
-#                 Requires large amounts of disk space, may be on a scratch partition if
-#                 the long-term archiver is invoked to move these files to permanent storage.
-#                 Files will remain here until the long-term archiver moves it to permanent storage.
-# dartroot        Location of the root of _your_ DART installation
-# baseobsdir      Part of the directory name containing the obs_seq.out files to be used in the
-#                 assimilation. The year, month, and filename will be provided in assimilate.csh.
-#                 Will be inherited by CESM#_#_DART_config and inserted into assimilate.csh
-# ==============================================================================
-
-setenv project      P86850054
-setenv machine      cheyenne
-setenv cesmdata     /glade/p/cesm/cseg/inputdata
-setenv cesmroot     /glade/p/work/${USER}/CESM/$cesmtag
-setenv caseroot     /glade/p/work/${USER}/cases/$cesmtag/${CASE}
-setenv rundir       /glade/scratch/${USER}/$cesmtag/${CASE}/run
-setenv exeroot      /glade/scratch/${USER}/$cesmtag/${CASE}/bld
-setenv archdir      /glade/scratch/${USER}/$cesmtag/${CASE}/archive
-
-setenv dartroot     /glade/p/work/thoar/DART/cesm_clm
-setenv baseobsdir   /glade/p/image/Observations/land/MODIS_SP_VOD_BIOMASS
-
-# ==============================================================================
-# job settings:
-#
-# queue      can be changed during a series by changing the case.run
-#            Cheyenne has limited queues in the early months:
-#               capability (> 1152 NODES), regular (<= 1152 nodes), share (< 16 PROCS).
-# timewall   can be changed during a series by changing the case.run
-#
-# TJH: Advancing 30 instances for 6 hours and assimilating took
-#      less than 10 minutes on yellowstone using 1800 pes (120 nodes)
-# ==============================================================================
-
-setenv queue        economy
-setenv timewall     0:20
-setenv short_term_archiver off
-
-# ==============================================================================
-# standard commands:
-#
-# If you are running on a machine where the standard commands are not in the
-# expected location, add a case for them below.
-# ==============================================================================
-
-set nonomatch       # suppress "rm" warnings if wildcard does not match anything
-
-# The FORCE options are not optional.
-# The VERBOSE options are useful for debugging though