[cam-users] Compilation porblem.

Xinwei Hong Xinwei Hong" <xwhong@lac.uic.edu
Fri, 22 Aug 2003 13:40:12 -0500


This is a multi-part message in MIME format.

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Dear Sir/Madam,

I am a novice to CAM. I encounter problem when I build the package.
The error message is attached at the end of the email.

Here are some basic information for my system.
OS: Linux version 2.4.18-3, one CPU.
PGF90 version: pgf90 5.0-2
Configuration cache file: see attached.


Thank you very much for any suggestion.


Xinwei

-----------------------------------------------------------------
Xinwei Hong                              Tel: 312-413-9576           =20
PostDoc Research Associate               Fax: 312-355-0373=20
Laboratory for Advanced Computing     http://www.lac.uic.edu=20
National Center for Data Mining       http://www.ncdm.uic.edu
Univ. of Illinois at Chicago                                      =20
713 SEO, M/C  249                      Email: xwhong@lac.uic.edu
851 S. Morgan Street                   Email: xwhong@uic.edu
Chicago, IL 60607-7045                                             =20
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--------------
[xwhong@ncdm191 bldtest]$
[xwhong@ncdm191 bldtest]$ make
/usr/bin/linux86/5.0/bin/pgf90 -c  -I =
/home/xwhong/cam/cam1/models/atm/cam/src/ocnsice/dom/ -I =
/home/xwhong/cam/cam1/models/utils/timing/ -I =
/home/xwhong/cam/cam1/models/atm/cam/src/dynamics/eul/ -DHIDE_MPI -I . =
-I /home/xwhong/cam/cam1/models/atm/cam/bldtest/esmf/mod/modg/linux/ -I =
/home/xwhong/cam/cam1/models/atm/cam/src/physics/cam1/ -I =
/home/xwhong/cam/netcdf-3.5.0/src/fortran/ -I =
/home/xwhong/cam/cam1/models/atm/cam/src/control/ =
/home/xwhong/cam/cam1/models/atm/cam/src/physics/cam1/chemistry.F90
NOTE: your evaluation license will expire in 13 days, 23.6 hours.
For a permanent license, please read the order acknowledgement
that you received.  Connect to https://www.pgroup.com/License with
the username and password in the order acknowledgement.

        Name:   pgf90licence
        User:   xwhong
        Email:  hong@uic.edu
        Hostid: PGI=3D00065BE0F836ADA8259D49
PGF90-S-0450-Argument number 5 to cnst_add: kind mismatch =
(/home/xwhong/cam/cam1/models/atm/cam/src/physics/cam1/chemistry.F90: =
103)
PGF90-S-0450-Argument number 5 to cnst_add: kind mismatch =
(/home/xwhong/cam/cam1/models/atm/cam/src/physics/cam1/chemistry.F90: =
104)
PGF90-S-0450-Argument number 5 to cnst_add: kind mismatch =
(/home/xwhong/cam/cam1/models/atm/cam/src/physics/cam1/chemistry.F90: =
105)
PGF90-S-0450-Argument number 5 to cnst_add: kind mismatch =
(/home/xwhong/cam/cam1/models/atm/cam/src/physics/cam1/chemistry.F90: =
106)
  0 inform,   0 warnings,   4 severes, 0 fatal for chem_register
make: *** [chemistry.o] Error 2

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Content-Type: text/xml;
	name="config_cache.xml"
Content-Transfer-Encoding: quoted-printable
Content-Disposition: attachment;
	filename="config_cache.xml"

<?xml version=3D"1.0"?>=0A=
=0A=
<config_bld>=0A=
=0A=
<comment>=0A=
This is a configuration file for building CAM.  It is the file format=0A=
produced by the configure script to store a build configuration.  It=0A=
may also be read by the configure script (via setting the -defaults=0A=
option) to provide a default build configuration.=0A=
=0A=
This file may be edited by hand to quickly customize a configuration.  If=0A=
hand editing is done it should be recognized that XML parser used to read=0A=
this file is not able to check the file for valid syntax.  Also, the=0A=
current parser places some restrictions on the normally valid XML syntax:=0A=
1. Attribute values must be enclosed in DOUBLE QUOTED STRINGS!!!=0A=
</comment>=0A=
=0A=
<comment>=0A=
cam_bld    CAM build directory, contains .o and .mod files=0A=
cam_exedir Directory where CAM executable will be created=0A=
cam_root   Root directory of CAM distribution=0A=
esmf_bld   Build directory for ESMF, only needed if ESMF lib will be =
built=0A=
esmf_root  Root directory of ESMF distribution, only needed if ESMF lib =
will be built=0A=
usr_src    User source directories to prepend to the filepath.  Multiple =
directories=0A=
           are specified as a comma separated list with no embedded =
white space.=0A=
</comment>=0A=
=0A=
<directories=0A=
cam_bld=3D"/home/xwhong/cam/cam1/models/atm/cam/bldtest"=0A=
cam_exedir=3D"/home/xwhong/cam/cam1/models/atm/cam/bldtest"=0A=
cam_root=3D"/home/xwhong/cam/cam1"=0A=
esmf_bld=3D"/home/xwhong/cam/cam1/models/atm/cam/bldtest/esmf"=0A=
esmf_root=3D"/home/xwhong/cam/cam1/models/utils/esmf"=0A=
usr_src=3D""=0A=
/>=0A=
=0A=
<comment>=0A=
dyn    Dynamics package: eul, sld, or fv=0A=
phys   Physics package: cam1=0A=
lnd    Land model: clm2 or lsm.  Currently this value depends on the=0A=
       phys value as follows:  cam1 =3D> clm2.=0A=
ocn    Use SST data: dom=0A=
sice   Sea ice package: csim4=0A=
pergro Use modifications that allow perturbation growth testing=0A=
           0 =3D> no, 1 =3D> yes=0A=
</comment>=0A=
=0A=
<packages=0A=
dyn=3D"eul"=0A=
phys=3D"cam1"=0A=
lnd=3D"clm2"=0A=
ocn=3D"dom"=0A=
sice=3D"csim4"=0A=
pergro=3D"0"=0A=
/>=0A=
=0A=
<comment>=0A=
res     Horizontal grid resolution.  Spectral dycores use Gaussian grids =
are specified=0A=
        by nlat x nlon.  The finite volume dycore uses an equally spaced =
grid that includes=0A=
        pole points and is specified as lat_cell_size x lon_cell_size in =
degrees.=0A=
nlon    Number of longitude grid points=0A=
nlat    Number of latitude grid points=0A=
nlev    Number of vertical levels=0A=
nadv    Number of advected constituents=0A=
nnadv   Number of non-advected constituents=0A=
trm     Maximum Fourier wavenumber=0A=
trn     Highest degree of the Legendre polynomials for m=3D0=0A=
trk     Highest degree of the associated Legendre polynomials=0A=
pcols   Maximum number of columns in a chunk=0A=
twod_yz Switch to enable or disable use of 2D Y-Z parallel decomposition =0A=
        (only used for FV dynamics)=0A=
</comment>=0A=
=0A=
<resolution=0A=
res=3D"64x128"=0A=
nlon=3D"128"=0A=
nlat=3D"64"=0A=
nlev=3D"26"=0A=
nadv=3D"1"=0A=
nnadv=3D"1"=0A=
trm=3D"42"=0A=
trn=3D"42"=0A=
trk=3D"42"=0A=
pcols=3D"16"=0A=
twod_yz=3D"0"=0A=
/>=0A=
=0A=
<comment>=0A=
cam_exe    Name of CAM executable=0A=
cc         User specified C compiler overrides Makefile default.=0A=
cflags     User specified C compiler options to append to Makefile =
defaults.=0A=
fc         User specified Fortran compiler overrides Makefile default.=0A=
debug      Switch to enable debugging options for Fortran compiler.=0A=
fflags     User specified Fortran compiler options to append to Makefile =
defaults.=0A=
ldflags    User specified ld options to append to Makefile defaults.=0A=
spmd       Switch to enable or disable building SPMD version of CAM.=0A=
smp        Switch to enable or disable building SMP version of CAM.=0A=
nc_inc     Directory containing NetCDF include files.=0A=
nc_lib     Directory containing NetCDF library.=0A=
nc_mod     Directory containing NetCDF module files.=0A=
mpi_inc    Directory containing MPI include files.=0A=
mpi_lib    Directory containing MPI library.=0A=
</comment>=0A=
=0A=
<makefile=0A=
cam_exe=3D"cam"=0A=
cc=3D"cc"=0A=
cflags=3D""=0A=
fc=3D"/usr/bin/linux86/5.0/bin/pgf90"=0A=
debug=3D"1"=0A=
fflags=3D"-I . -I =
/home/xwhong/cam/cam1/models/atm/cam/bldtest/esmf/mod/modg/linux/ -I =
/home/xwhong/cam/cam1/models/atm/cam/src/physics/cam1/ -I =
/home/xwhong/cam/netcdf-3.5.0/src/fortran/ -I =
/home/xwhong/cam/cam1/models/atm/cam/src/control/"=0A=
ldflags=3D""=0A=
spmd=3D"0"=0A=
smp=3D"0"=0A=
nc_inc=3D"/home/xwhong/cam/netcdf-3.5.0/include"=0A=
nc_lib=3D"/home/xwhong/cam/netcdf-3.5.0/lib"=0A=
nc_mod=3D"/home/xwhong/cam/netcdf-3.5.0/include"=0A=
mpi_inc=3D""=0A=
mpi_lib=3D""=0A=
/>=0A=
=0A=
</config_bld>=0A=

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