[cam-users] Compilation porblem.
Xinwei Hong
Xinwei Hong" <xwhong@lac.uic.edu
Fri, 22 Aug 2003 13:40:12 -0500
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Dear Sir/Madam,
I am a novice to CAM. I encounter problem when I build the package.
The error message is attached at the end of the email.
Here are some basic information for my system.
OS: Linux version 2.4.18-3, one CPU.
PGF90 version: pgf90 5.0-2
Configuration cache file: see attached.
Thank you very much for any suggestion.
Xinwei
-----------------------------------------------------------------
Xinwei Hong Tel: 312-413-9576 =20
PostDoc Research Associate Fax: 312-355-0373=20
Laboratory for Advanced Computing http://www.lac.uic.edu=20
National Center for Data Mining http://www.ncdm.uic.edu
Univ. of Illinois at Chicago =20
713 SEO, M/C 249 Email: xwhong@lac.uic.edu
851 S. Morgan Street Email: xwhong@uic.edu
Chicago, IL 60607-7045 =20
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[xwhong@ncdm191 bldtest]$
[xwhong@ncdm191 bldtest]$ make
/usr/bin/linux86/5.0/bin/pgf90 -c -I =
/home/xwhong/cam/cam1/models/atm/cam/src/ocnsice/dom/ -I =
/home/xwhong/cam/cam1/models/utils/timing/ -I =
/home/xwhong/cam/cam1/models/atm/cam/src/dynamics/eul/ -DHIDE_MPI -I . =
-I /home/xwhong/cam/cam1/models/atm/cam/bldtest/esmf/mod/modg/linux/ -I =
/home/xwhong/cam/cam1/models/atm/cam/src/physics/cam1/ -I =
/home/xwhong/cam/netcdf-3.5.0/src/fortran/ -I =
/home/xwhong/cam/cam1/models/atm/cam/src/control/ =
/home/xwhong/cam/cam1/models/atm/cam/src/physics/cam1/chemistry.F90
NOTE: your evaluation license will expire in 13 days, 23.6 hours.
For a permanent license, please read the order acknowledgement
that you received. Connect to https://www.pgroup.com/License with
the username and password in the order acknowledgement.
Name: pgf90licence
User: xwhong
Email: hong@uic.edu
Hostid: PGI=3D00065BE0F836ADA8259D49
PGF90-S-0450-Argument number 5 to cnst_add: kind mismatch =
(/home/xwhong/cam/cam1/models/atm/cam/src/physics/cam1/chemistry.F90: =
103)
PGF90-S-0450-Argument number 5 to cnst_add: kind mismatch =
(/home/xwhong/cam/cam1/models/atm/cam/src/physics/cam1/chemistry.F90: =
104)
PGF90-S-0450-Argument number 5 to cnst_add: kind mismatch =
(/home/xwhong/cam/cam1/models/atm/cam/src/physics/cam1/chemistry.F90: =
105)
PGF90-S-0450-Argument number 5 to cnst_add: kind mismatch =
(/home/xwhong/cam/cam1/models/atm/cam/src/physics/cam1/chemistry.F90: =
106)
0 inform, 0 warnings, 4 severes, 0 fatal for chem_register
make: *** [chemistry.o] Error 2
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Content-Type: text/xml;
name="config_cache.xml"
Content-Transfer-Encoding: quoted-printable
Content-Disposition: attachment;
filename="config_cache.xml"
<?xml version=3D"1.0"?>=0A=
=0A=
<config_bld>=0A=
=0A=
<comment>=0A=
This is a configuration file for building CAM. It is the file format=0A=
produced by the configure script to store a build configuration. It=0A=
may also be read by the configure script (via setting the -defaults=0A=
option) to provide a default build configuration.=0A=
=0A=
This file may be edited by hand to quickly customize a configuration. If=0A=
hand editing is done it should be recognized that XML parser used to read=0A=
this file is not able to check the file for valid syntax. Also, the=0A=
current parser places some restrictions on the normally valid XML syntax:=0A=
1. Attribute values must be enclosed in DOUBLE QUOTED STRINGS!!!=0A=
</comment>=0A=
=0A=
<comment>=0A=
cam_bld CAM build directory, contains .o and .mod files=0A=
cam_exedir Directory where CAM executable will be created=0A=
cam_root Root directory of CAM distribution=0A=
esmf_bld Build directory for ESMF, only needed if ESMF lib will be =
built=0A=
esmf_root Root directory of ESMF distribution, only needed if ESMF lib =
will be built=0A=
usr_src User source directories to prepend to the filepath. Multiple =
directories=0A=
are specified as a comma separated list with no embedded =
white space.=0A=
</comment>=0A=
=0A=
<directories=0A=
cam_bld=3D"/home/xwhong/cam/cam1/models/atm/cam/bldtest"=0A=
cam_exedir=3D"/home/xwhong/cam/cam1/models/atm/cam/bldtest"=0A=
cam_root=3D"/home/xwhong/cam/cam1"=0A=
esmf_bld=3D"/home/xwhong/cam/cam1/models/atm/cam/bldtest/esmf"=0A=
esmf_root=3D"/home/xwhong/cam/cam1/models/utils/esmf"=0A=
usr_src=3D""=0A=
/>=0A=
=0A=
<comment>=0A=
dyn Dynamics package: eul, sld, or fv=0A=
phys Physics package: cam1=0A=
lnd Land model: clm2 or lsm. Currently this value depends on the=0A=
phys value as follows: cam1 =3D> clm2.=0A=
ocn Use SST data: dom=0A=
sice Sea ice package: csim4=0A=
pergro Use modifications that allow perturbation growth testing=0A=
0 =3D> no, 1 =3D> yes=0A=
</comment>=0A=
=0A=
<packages=0A=
dyn=3D"eul"=0A=
phys=3D"cam1"=0A=
lnd=3D"clm2"=0A=
ocn=3D"dom"=0A=
sice=3D"csim4"=0A=
pergro=3D"0"=0A=
/>=0A=
=0A=
<comment>=0A=
res Horizontal grid resolution. Spectral dycores use Gaussian grids =
are specified=0A=
by nlat x nlon. The finite volume dycore uses an equally spaced =
grid that includes=0A=
pole points and is specified as lat_cell_size x lon_cell_size in =
degrees.=0A=
nlon Number of longitude grid points=0A=
nlat Number of latitude grid points=0A=
nlev Number of vertical levels=0A=
nadv Number of advected constituents=0A=
nnadv Number of non-advected constituents=0A=
trm Maximum Fourier wavenumber=0A=
trn Highest degree of the Legendre polynomials for m=3D0=0A=
trk Highest degree of the associated Legendre polynomials=0A=
pcols Maximum number of columns in a chunk=0A=
twod_yz Switch to enable or disable use of 2D Y-Z parallel decomposition =0A=
(only used for FV dynamics)=0A=
</comment>=0A=
=0A=
<resolution=0A=
res=3D"64x128"=0A=
nlon=3D"128"=0A=
nlat=3D"64"=0A=
nlev=3D"26"=0A=
nadv=3D"1"=0A=
nnadv=3D"1"=0A=
trm=3D"42"=0A=
trn=3D"42"=0A=
trk=3D"42"=0A=
pcols=3D"16"=0A=
twod_yz=3D"0"=0A=
/>=0A=
=0A=
<comment>=0A=
cam_exe Name of CAM executable=0A=
cc User specified C compiler overrides Makefile default.=0A=
cflags User specified C compiler options to append to Makefile =
defaults.=0A=
fc User specified Fortran compiler overrides Makefile default.=0A=
debug Switch to enable debugging options for Fortran compiler.=0A=
fflags User specified Fortran compiler options to append to Makefile =
defaults.=0A=
ldflags User specified ld options to append to Makefile defaults.=0A=
spmd Switch to enable or disable building SPMD version of CAM.=0A=
smp Switch to enable or disable building SMP version of CAM.=0A=
nc_inc Directory containing NetCDF include files.=0A=
nc_lib Directory containing NetCDF library.=0A=
nc_mod Directory containing NetCDF module files.=0A=
mpi_inc Directory containing MPI include files.=0A=
mpi_lib Directory containing MPI library.=0A=
</comment>=0A=
=0A=
<makefile=0A=
cam_exe=3D"cam"=0A=
cc=3D"cc"=0A=
cflags=3D""=0A=
fc=3D"/usr/bin/linux86/5.0/bin/pgf90"=0A=
debug=3D"1"=0A=
fflags=3D"-I . -I =
/home/xwhong/cam/cam1/models/atm/cam/bldtest/esmf/mod/modg/linux/ -I =
/home/xwhong/cam/cam1/models/atm/cam/src/physics/cam1/ -I =
/home/xwhong/cam/netcdf-3.5.0/src/fortran/ -I =
/home/xwhong/cam/cam1/models/atm/cam/src/control/"=0A=
ldflags=3D""=0A=
spmd=3D"0"=0A=
smp=3D"0"=0A=
nc_inc=3D"/home/xwhong/cam/netcdf-3.5.0/include"=0A=
nc_lib=3D"/home/xwhong/cam/netcdf-3.5.0/lib"=0A=
nc_mod=3D"/home/xwhong/cam/netcdf-3.5.0/include"=0A=
mpi_inc=3D""=0A=
mpi_lib=3D""=0A=
/>=0A=
=0A=
</config_bld>=0A=
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