[Wrf-users] Error when changing cumulus scheme

Richard Newton richard.newton-6 at postgrad.manchester.ac.uk
Mon Aug 1 11:23:45 MDT 2016


Hello Muhammadh,

I believe you’re using the MYJ PBL scheme: in your namelist it will read: bl_pbl_physics = 2. You must use a compatible surface layer physics scheme with it: set sf_sfclay_physics = 2 to use the Monin-Obukhov Eta similarity surface layer physics scheme that is compatible with the MYJ PBL scheme. Just re-run wrf.exe with the new namelist option and it should work.

Hope this helps,
Richard

Richard Newton
PhD Student
Centre for Atmospheric Science
University of Manchester



From: Muhammadhn Muhammadh Khalid [mailto:kmmuhammadh at gmail.com]
Sent: 31 July 2016 03:33
To: wrf-users at ucar.edu
Subject: [Wrf-users] Error when changing cumulus scheme

I'm running wrf changing cumulus scheme. But I'm getting the following error. Can you please help me to solve this error.
Following is the error mesaage.

hpcuser1 at aiken:~/RUNS/calibration/cmulus2005/a$ ./wrf.exe
Setting blank km_opt entries to domain #1 values.
 --> The km_opt entry in the namelist.input is now max_domains.
Setting blank diff_opt entries to domain #1 values.
 --> The diff_opt entry in the namelist.input is now max_domains.
--- WARNING: traj_opt is zero, but num_traj is not zero; setting num_traj to zero.
--- NOTE: sst_update is 0, setting io_form_auxinput4 = 0 and auxinput4_interval = 0 for all domains
--- NOTE: sst_update is 0, setting io_form_auxinput4 = 0 and auxinput4_interval = 0 for all domains
--- NOTE: sst_update is 0, setting io_form_auxinput4 = 0 and auxinput4_interval = 0 for all domains
--- NOTE: grid_fdda is 0 for domain      1, setting gfdda interval and ending time to 0 for that domain.
--- NOTE: both grid_sfdda and pxlsm_soil_nudge are 0 for domain      1, setting sgfdda interval and ending time to 0 for that domain.
--- NOTE: obs_nudge_opt is 0 for domain      1, setting obs nudging interval and ending time to 0 for that domain.
--- NOTE: grid_fdda is 0 for domain      2, setting gfdda interval and ending time to 0 for that domain.
--- NOTE: both grid_sfdda and pxlsm_soil_nudge are 0 for domain      2, setting sgfdda interval and ending time to 0 for that domain.--- NOTE: obs_nudge_opt is 0 for domain      2, setting obs nudging interval and ending time to 0 for that domain.--- NOTE: grid_fdda is 0 for domain      3, setting gfdda interval and ending time to 0 for that domain.--- NOTE: both grid_sfdda and pxlsm_soil_nudge are 0 for domain      3, setting sgfdda interval and ending time to 0 for that domain.--- NOTE: obs_nudge_opt is 0 for domain      3, setting obs nudging interval and ending time to 0 for that domain.
bl_pbl_physics /= 4, implies mfshconv must be 0, resetting--- NOTE: CAM radiation is in use, setting:  paerlev=29, levsiz=59, cam_abs_dim1=4, cam_abs_dim2=e_vert
--- NOTE: num_soil_layers has been set to      4
WRF V3.6.1 MODEL
 *************************************
 Parent domain
 ids,ide,jds,jde            1         100           1         109
 ims,ime,jms,jme           -4         105          -4         114
 ips,ipe,jps,jpe            1         100           1         109
 *************************************
DYNAMICS OPTION: Eulerian Mass Coordinate   alloc_space_field: domain            1 ,             432705812  bytes allocated
  med_initialdata_input: calling input_inputTiming for processing wrfinput file (stream 0) for domain        1:    0.04682 elapsed seconds
INPUT LandUse = "USGS" LANDUSE TYPE = "USGS" FOUND          33  CATEGORIES           2  SEASONS WATER CATEGORY =           16  SNOW CATEGORY =           24
  *** SATURATION VAPOR PRESSURE TABLE COMPLETED *** AEROSOLS:  Background aerosol will be limited to bottom            3  model interfaces.
INITIALIZE THREE Noah LSM RELATED TABLES
 LANDUSE TYPE = USGS FOUND          27  CATEGORIES
 INPUT SOIL TEXTURE CLASSIFICATION = STAS
 SOIL TEXTURE CLASSIFICATION = STAS FOUND          19  CATEGORIES
-------------- FATAL CALLED ---------------
module_physics_init: use myjsfc scheme for this pbl option
-------------------------------------------
-------------- FATAL CALLED ---------------
module_physics_init: use myjsfc scheme for this pbl option
-------------------------------------------

Following is my namelist

&time_control
run_days                 = 1,
run_hours                = 0,
run_minutes              = 0,
run_seconds              = 0,
start_year               = 2005,     2005,     2005,
start_month              = 09,       09,       09,
start_day                = 03,       03,       03,
start_hour               = 18,       18,       18,
start_minute             = 00,       00,       00,
start_second             = 00,       00,       00,
end_year                 = 2005,     2005,     2005,
end_month                = 09,       09,       09,
end_day                  = 04,       04,       04,
end_hour                 = 18,       18,       18,
end_minute               = 00,       00,       00,
end_second               = 00,       00,       00,
interval_seconds         = 21600,
input_from_file          = .true.,   .true.,   .true.,
history_interval         = 180,       60,       60,
frames_per_outfile       = 1000,     1000,     1000,
restart                  = .false.,
restart_interval         = 5000,
io_form_history          = 2,
io_form_restart          = 2,
io_form_input            = 2,
io_form_boundary         = 2,
debug_level              = 0,
/

&domains
eta_levels               = 1.000, 0.9655, 0.931, 0.8966, 0.8621,
                0.8276, 0.7931, 0.7586, 0.7241, 0.6897,
                0.6552, 0.6207, 0.5862, 0.5517, 0.5172,
                0.4828, 0.4483, 0.4138, 0.3793, 0.3448,
                0.3103, 0.2759, 0.2414, 0.2069, 0.1724,
                0.1379, 0.1034, 0.069, 0.0345, 0.000,
time_step                = 150,
time_step_fract_num      = 0,
time_step_fract_den      = 1,
max_dom                  = 3,
e_we                     = 100,       88,       73,
e_sn                     = 109,       97,       82,
e_vert                   = 30,       30,       30,
p_top_requested          = 5000.0,
num_metgrid_levels       = 27,
num_metgrid_soil_levels  = 4,
dx                       = 30000,    10000, 3333.333,
dy                       = 30000,    10000, 3333.333,
grid_id                  = 1,        2,        3,
parent_id                = 1,        1,        2,
i_parent_start           = 1,       36,       30,
j_parent_start           = 1,       40,       32,
parent_grid_ratio        = 1,        3,        3,
parent_time_step_ratio   = 1,        3,        3,
feedback                 = 1,
smooth_option            = 0,
/

&physics
mp_physics               = 7,        7,        7,
ra_lw_physics            = 1,        1,        1,
ra_sw_physics            = 3,        3,        3,
radt                     = 30,       30,       30,
sf_sfclay_physics        = 1,        1,        1,
sf_surface_physics       = 2,        2,        2,
bl_pbl_physics           = 2,        2,        2,
bldt                     = 0,        0,        0,
cu_physics               = 2,        2,        2,
cudt                     = 5,        5,        5,
isfflx                   = 1,
ifsnow                   = 0,
icloud                   = 1,
surface_input_source     = 1,
num_soil_layers          = 4,
sf_urban_physics         = 0,        0,        0,
maxiens                  = 1,
maxens                   = 3,
maxens2                  = 3,
maxens3                  = 16,
ensdim                   = 144,
/

&fdda
/

&dynamics
w_damping                = 0,
diff_opt                 = 1,
km_opt                   = 4,
diff_6th_opt             = 0,        0,        0,
diff_6th_factor          = 0.12,     0.12,     0.12,
base_temp                = 290.,
damp_opt                 = 0,
zdamp                    = 5000.,    5000.,    5000.,
dampcoef                 = 0.2,      0.2,      0.2,
khdif                    = 0,        0,        0,
kvdif                    = 0,        0,        0,
non_hydrostatic          = .true.,   .true.,   .true.,
moist_adv_opt            = 1,        1,        1,
scalar_adv_opt           = 1,        1,        1,
/

&bdy_control
spec_bdy_width           = 5,
spec_zone                = 1,
relax_zone               = 4,
specified                = .true.,  .false.,  .false.,
nested                   = .false.,   .true.,   .true.,
/

&grib2
/

&namelist_quilt
nio_tasks_per_group      = 0,
nio_groups               = 1,
/

--
Regards,
Muhammadh M Khalid

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