[ncl-talk] addfiles error in ncl
Mary Haley
haley at ucar.edu
Mon Nov 30 09:32:22 MST 2015
Debasish,
I have filed a trouble ticket on this, NCL-2315.
There's something about file #132 that is causing a problem. I can read a
variable from files [0:131] or [132:], but for some reason, combining files
131 and 132 is a problem.
You may want to double check the "time" variable in your files, because I
noticed that the files represented by the dates 20030501 and 20030601 have
the same time value of 1051747200. This is definitely going to be an issue,
but for some reason, NCL didn't seem to fail on these two files.
--Mary
On Wed, Nov 25, 2015 at 3:57 PM, Mary Haley <haley at ucar.edu> wrote:
> Thanks Debasish! I do see the problem and am looking into it.
>
> For starters, though, I think you want "cat" mode and not "join" mode.
> "cat" mode will append your time values. Otherwise, you end up with a 144
> x 1 x 180 x 360 array, when I think what you want is a 144 x 180 x 360
> array.
>
> But, it fails in "cat" mode too, right when it hits file #132.
>
> We are off Thursday and Friday for Thanksgiving holiday, so I may not get
> back to this right away.
>
> I appreciate you providing the files.
>
> --Mary
>
>
> On Wed, Nov 25, 2015 at 3:29 PM, Debasish Hazra <debasish.hazra5 at gmail.com
> > wrote:
>
>> Thanks Mary. I attached the script along with this email and uploaded the
>> files in ftp.
>>
>> Debasish.
>>
>> On Wed, Nov 25, 2015 at 4:57 PM, Mary Haley <haley at ucar.edu> wrote:
>>
>>> Debasish,
>>>
>>> Can you create a small clean script that shows the problem with just a
>>> subset of the files, and then provide me with the script and the files?
>>>
>>> Thanks,
>>>
>>> --Mary
>>>
>>>
>>> On Wed, Nov 25, 2015 at 2:02 PM, Debasish Hazra <
>>> debasish.hazra5 at gmail.com> wrote:
>>>
>>>> Mary,
>>>>
>>>> I tried your inclusion in the code. Variable exists in all files.
>>>>
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20030101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20030201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20030301.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20030401.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20030501.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20030601.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20030701.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20030801.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20030901.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20031001.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20031101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20031201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20040101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20040201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20040301.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20040401.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20040501.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20040601.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20040701.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20040801.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20040901.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20041001.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20041101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20041201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20050101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20050201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20050301.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20050401.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20050501.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20050601.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20050701.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20050801.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20050901.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20051001.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20051101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20051201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20060101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20060201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20060301.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20060401.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20060501.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20060601.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20060701.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20060801.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20060901.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20061001.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20061101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20061201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20070101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20070201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20070301.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20070401.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20070501.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20070601.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20070701.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20070801.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20070901.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20071001.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20071101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20071201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20080101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20080201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20080301.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20080401.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20080501.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20080601.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20080701.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20080801.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20080901.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20081001.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20081101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20081201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20090101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20090201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20090301.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20090401.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20090501.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20090601.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20090701.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20090801.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20090901.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20091001.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20091101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20091201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20100101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20100201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20100301.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20100401.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20100501.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20100601.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20100701.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20100801.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20100901.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20101001.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20101101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20101201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20110101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20110201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20110301.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20110401.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20110501.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20110601.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20110701.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20110801.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20110901.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20111001.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20111101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20111201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20120101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20120201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20120301.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20120401.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20120501.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20120601.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20120701.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20120801.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20120901.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20121001.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20121101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20121201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20130101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20130201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20130301.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20130401.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20130501.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20130601.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20130701.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20130801.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20130901.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20131001.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20131101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20131201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20140101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20140201.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20140301.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20140401.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20140501.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20140601.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20140701.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20140801.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20140901.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20141001.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20141101.180W_90S_180E_90N.nc'?
>>>> True
>>>> (0) Is variable on file '../../MODIS/Monthly/AOD/
>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20141201.180W_90S_180E_90N.nc'?
>>>> True
>>>> fatal:incorrect size for list filevar subselection
>>>> fatal:["Execute.c":8578]:Execute: Error occurred at or near line 41 in
>>>> file aerosl2d_modis.ncl
>>>>
>>>> But it shows error in the line : mod_aod =
>>>> m[:]->MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean
>>>>
>>>> Debasish.
>>>>
>>>> On Wed, Nov 25, 2015 at 3:34 PM, Mary Haley <haley at ucar.edu> wrote:
>>>>
>>>>> Debasish,
>>>>>
>>>>> Is the error message the same? If so, you should verify that the
>>>>> variable "MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean" exists on
>>>>> all files.
>>>>>
>>>>> To verify this, try:
>>>>>
>>>>> vname = "MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean"
>>>>> do n=0,dimsizes(fname)-1
>>>>> var_exists = isfilevar(m[n],vname)
>>>>> print("Is variable on file '" + fname(n) + "'? " + var_exists)
>>>>> end do
>>>>>
>>>>> If you are getting a different error message, then please include
>>>>> this, and include the code again.
>>>>>
>>>>> Thanks,
>>>>>
>>>>> --Mary
>>>>>
>>>>>
>>>>> On Wed, Nov 25, 2015 at 12:12 PM, Debasish Hazra <
>>>>> debasish.hazra5 at gmail.com> wrote:
>>>>>
>>>>>> Kyle,
>>>>>>
>>>>>> Thanks. I tried with your option :
>>>>>> fname = systemfunc("ls -1 ../../MODIS/Monthly/AOD/*.nc")
>>>>>> m = addfiles(fname,"r")
>>>>>> ListSetType (m, "join")
>>>>>>
>>>>>> print(m)
>>>>>> and it printed out all the 144 file names. I have attached a text
>>>>>> file of the output. But still shows, it cannot read that variable.
>>>>>>
>>>>>> Debasish
>>>>>>
>>>>>> On Wed, Nov 25, 2015 at 1:38 PM, Kyle Griffin <ksgriffin2 at wisc.edu>
>>>>>> wrote:
>>>>>>
>>>>>>> Have you considered the input to addfiles? You appear to be passing
>>>>>>> the filesize value (column 5 when you run ls -l (lower case L) in your
>>>>>>> directory) to the NCL function. I can't imagine this is intended, as
>>>>>>> addfiles is looking for the file name itself - but fname ends up as the
>>>>>>> size, not the name. Even if you were getting them as names, you then run
>>>>>>> toint(fname), which should fail if you were actually getting the names as
>>>>>>> strings.
>>>>>>>
>>>>>>> Try using 'ls -1 filenames*.nc' (the number one) and this should
>>>>>>> print out all of your files in that directory with one name on each line, a
>>>>>>> format that addfiles will read from quite well and you can avoid your use
>>>>>>> of awk. Your current method could also work, but would require pulling a
>>>>>>> later column in the awk command (perhaps 9?).
>>>>>>>
>>>>>>> Consider what you actually want your 'print(fsz)' statement to
>>>>>>> output...you do well by looking at it, but that output is showing you the
>>>>>>> problem of trying to read the variable from a bunch of numbers and not
>>>>>>> files.
>>>>>>>
>>>>>>>
>>>>>>> Kyle
>>>>>>>
>>>>>>> ----------------------------------------
>>>>>>> Kyle S. Griffin
>>>>>>> Department of Atmospheric and Oceanic Sciences
>>>>>>> University of Wisconsin - Madison
>>>>>>> Room 1407
>>>>>>> 1225 W Dayton St, Madison, WI 53706
>>>>>>> Email: ksgriffin2 at wisc.edu
>>>>>>>
>>>>>>> On Wed, Nov 25, 2015 at 12:28 PM, Debasish Hazra <
>>>>>>> debasish.hazra5 at gmail.com> wrote:
>>>>>>>
>>>>>>>> Hi,
>>>>>>>>
>>>>>>>> I am trying to read bunch of files in ncl and at first it gave "
>>>>>>>> ncl fatal:incorrect size for list filevar subselection" error. Followed by
>>>>>>>> ncl examples I tried something like this :
>>>>>>>>
>>>>>>>> fname = systemfunc("ls -l ../../MODIS/Monthly/AOD/*.nc | awk
>>>>>>>> '{print $5}' ")
>>>>>>>> fsz = toint(fname)
>>>>>>>> m = addfiles(fsz,"r")
>>>>>>>> ListSetType (m, "join")
>>>>>>>>
>>>>>>>> print(fsz)
>>>>>>>> printVarSummary(fsz)
>>>>>>>>
>>>>>>>> mod_aod =
>>>>>>>> m[:]->MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean
>>>>>>>>
>>>>>>>> which print outs and gave error as :
>>>>>>>>
>>>>>>>> Variable: fsz
>>>>>>>> Type: integer
>>>>>>>> Total Size: 576 bytes
>>>>>>>> 144 values
>>>>>>>> Number of Dimensions: 1
>>>>>>>> Dimensions and sizes: [144]
>>>>>>>> Coordinates:
>>>>>>>> (0) 264160
>>>>>>>> (1) 263836
>>>>>>>> (2) 263836
>>>>>>>> (3) 263836
>>>>>>>> (4) 263836
>>>>>>>> (5) 263836
>>>>>>>> (6) 263836
>>>>>>>> (7) 263836
>>>>>>>> (8) 263836
>>>>>>>> (9) 263836
>>>>>>>> [SNIP]
>>>>>>>> (133) 522664
>>>>>>>> (134) 522664
>>>>>>>> (135) 522664
>>>>>>>> (136) 522664
>>>>>>>> (137) 522664
>>>>>>>> (138) 522668
>>>>>>>> (139) 522668
>>>>>>>> (140) 522668
>>>>>>>> (141) 522668
>>>>>>>> (142) 522664
>>>>>>>> (143) 522664
>>>>>>>>
>>>>>>>> fatal:No valid instance of variable
>>>>>>>> MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean found in file list
>>>>>>>>
>>>>>>>> However, ncl_filedump of this files show :
>>>>>>>> g4.subsetted.MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean.20130701.180W_90S_180E_90N.nc
>>>>>>>>
>>>>>>>> shows
>>>>>>>> title : MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean
>>>>>>>> (180W_90S_180E_90N)
>>>>>>>> dimensions:
>>>>>>>> time = 1 // unlimited
>>>>>>>> lat = 180
>>>>>>>> lon = 360
>>>>>>>> variables:
>>>>>>>> float MYD08_M3_051_Optical_Depth_Land_And_Ocean_Mean_Mean (
>>>>>>>> time, lat, lon )
>>>>>>>>
>>>>>>>> Any help why this one is not working. Thanks.
>>>>>>>>
>>>>>>>> Attached is the one of the many identical files I was trying to
>>>>>>>> work on.
>>>>>>>>
>>>>>>>> Debasish.
>>>>>>>>
>>>>>>>>
>>>>>>>> _______________________________________________
>>>>>>>> ncl-talk mailing list
>>>>>>>> ncl-talk at ucar.edu
>>>>>>>> List instructions, subscriber options, unsubscribe:
>>>>>>>> http://mailman.ucar.edu/mailman/listinfo/ncl-talk
>>>>>>>>
>>>>>>>>
>>>>>>>
>>>>>>
>>>>>> _______________________________________________
>>>>>> ncl-talk mailing list
>>>>>> ncl-talk at ucar.edu
>>>>>> List instructions, subscriber options, unsubscribe:
>>>>>> http://mailman.ucar.edu/mailman/listinfo/ncl-talk
>>>>>>
>>>>>>
>>>>>
>>>>
>>>
>>
>
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