[ncl-install] [ncl-talk] NCL install into Cygwin

Mark Chan cym263 at yahoo.com
Mon Sep 17 02:28:23 MDT 2012 

Dear Mary,
 
In my home folder there are three files as ".bashrc"   ".bash_profile" and ".profile". In the descrption of .profile that if ".bash_profile" exist, then ".profile" doesn't work. 
 
When do "source .bash_profile", it will also run ".bashrc". If only run ".bashrc", it is not complete. So I have to always manually run ".bash_profile". I still wonder why ".bash_profile" did not run automatically. 
 
-----------my ".bash_profile" as:-------------
# To the extent possible under law, the author(s) have dedicated all
# copyright and related and neighboring rights to this software to the
# public domain worldwide. This software is distributed without any warranty.
# You should have received a copy of the CC0 Public Domain Dedication along
# with this software.
# If not, see <http://creativecommons.org/publicdomain/zero/1.0/>.
# base-files version 4.1-1
# ~/.bash_profile: executed by bash(1) for login shells.
# The latest version as installed by the Cygwin Setup program can
# always be found at /etc/defaults/etc/skel/.bash_profile
# Modifying /etc/skel/.bash_profile directly will prevent
# setup from updating it.
# The copy in your home directory (~/.bash_profile) is yours, please
# feel free to customise it to create a shell
# environment to your liking.  If you feel a change
# would be benifitial to all, please feel free to send
# a patch to the cygwin mailing list.
# User dependent .bash_profile file
# source the users bashrc if it exists
if [ -f "${HOME}/.bashrc" ] ; then
  source "${HOME}/.bashrc"
fi
source /home/ychen/.bashrc
# Set PATH so it includes user's private bin if it exists
# if [ -d "${HOME}/bin" ] ; then
#   PATH="${HOME}/bin:${PATH}"
# fi
# Set MANPATH so it includes users' private man if it exists
# if [ -d "${HOME}/man" ]; then
#   MANPATH="${HOME}/man:${MANPATH}"
# fi
# Set INFOPATH so it includes users' private info if it exists
# if [ -d "${HOME}/info" ]; then
#   INFOPATH="${HOME}/info:${INFOPATH}"
# fi



________________________________
From: Mary Haley <haley at ucar.edu>
To: Mark Chan <cym263 at yahoo.com> 
Cc: "ncl-install at ucar.edu" <ncl-install at ucar.edu> 
Sent: Saturday, September 15, 2012 12:10 AM
Subject: Re: [ncl-install] [ncl-talk] NCL install into Cygwin

Mark,

It may be a different file, like ".bashrc" or ".profile".  You can see if you have these files with:

ls -a ~/.

I've seen cases where users had one or more of these files, and usually it's the .profile file that is executed automatically.

--Mary

On Sep 14, 2012, at 1:02 AM, Mark Chan wrote:

> 
> Dear NCL developer,
>  
> I would like to use NCL in cygwin. I want to ask why the ".bash_profile" was not executed automatically when I start up cygwin ( I have to do as "source .bash_profile" manually).
> I know this is a linux question but I would appreciate it if you could give any help.
>  
> With my best regards,
> Mark 
> 
> ----- Forwarded Message -----
> From: Mary Haley <haley at ucar.edu>
> To: Mark Chan <cym263 at yahoo.com> 
> Cc: NCL Helpline <ncl-talk at ucar.edu> 
> Sent: Wednesday, September 12, 2012 4:08 AM
> Subject: Re: [ncl-talk] NCL install into Cygwin
> 
> Dear Mark,
> 
> In the future, please post NCL installation questions to ncl-install at ucar.edu (http://mailman.ucar.edu/mailman/listinfo/ncl-install).
> 
> It looks like your NCARG_ROOT environment variable is not set, or is not set correctly. For information on setting NCARG_ROOT, read:
> 
> http://www.ncl.ucar.edu/Download/install.shtml#SetNCARG_ROOT
> 
> --Mary
> 
> On Sep 10, 2012, at 2:27 AM, Mark Chan wrote:
> 
> > 
> > Dear NCL developer,
> > 
> > I have installed Cygwin into my MS windows and also intall NCL into it. However, when I do a run test, got the error message as below.
> > I found I don"t have "ncarg" folder in the path as "$NCARG_ROOT/lib/ncarg". Could you please give some suggestion?
> > 
> > Thanks a lot!
> > Mark 
> > 
> > -------NCL run test-------------------------------------------
> > $ ncl map_only_1.ncl
> >  Copyright (C) 1995-2011 - All Rights Reserved
> >  University Corporation for Atmospheric Research
> >  NCAR Command Language Version 6.0.0
> >  The use of this software is governed by a License Agreement.
> >  See http://www.ncl.ucar.edu/ for more details.
> > warning:Unable to Get System Resource File Name?
> > warning:Unable to load System Resource File (null)
> > fatal:GetSysAppDir:Unable to get a default value for the system App Resource directory
> > warning:["Resources.c":734]:Unable to set appSysDir to default value - Using NULL
> > fatal:GetSysAppDir:Unable to get a default value for the system App Resource directory
> > warning:["Resources.c":734]:Unable to set appSysDir to default value - Using NULL
> > warning:Unable to Get System Resource File Name?
> > warning:WorkstationClassInitialize:Unable to access rgb color database - named colors unsupported:[errno=2]
> > NDV_COLORMAP_PATH environment variable not set:
> >        defaulting to .:$NCARG_ROOT/lib/ncarg/colormaps
> > warning:["Palette.c":1527]:NhlLoadColormapFiles: Invalid directory encountered in colormap path specification
> > fatal:Could not open ($NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl)
> > fatal:error at line 9 in file map_only_1.ncl
> > 
> > ---------NCL code-------------
> > ;================================================;
> > load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
> > load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"
> > ; ================================================;
> > begin
> > 
> >  wks  = gsn_open_wks("ps","maponly")    ; open a ps file
> >  plot = gsn_csm_map_ce(wks,False)        ; draw global map
> > 
> >  end
> > 
> > 
> > 
> > 
> > 
> > From: Mark Chan <cym263 at yahoo.com>
> > Subject: NCL install into Cygwin
> > Date: September 8, 2012 7:33:19 PM MDT
> > To: "ncl-install at ucar.edu" <ncl-install at ucar.edu>
> > Reply-To: Mark Chan <cym263 at yahoo.com>
> > 
> > 
> > Dear NCL developer,
> > 
> > I have installed Cygwin into my MS windows and also intall NCL into it. However, when I do a run test, got the error message as below.
> > I found I don"t have "ncarg" folder in the path as "$NCARG_ROOT/lib/ncarg". Could you please give some suggestion?
> > 
> > Thanks a lot!
> > Mark 
> > 
> > -------NCL run test-------------------------------------------
> > $ ncl map_only_1.ncl
> >  Copyright (C) 1995-2011 - All Rights Reserved
> >  University Corporation for Atmospheric Research
> >  NCAR Command Language Version 6.0.0
> >  The use of this software is governed by a License Agreement.
> >  See http://www.ncl.ucar.edu/ for more details.
> > warning:Unable to Get System Resource File Name?
> > warning:Unable to load System Resource File (null)
> > fatal:GetSysAppDir:Unable to get a default value for the system App Resource directory
> > warning:["Resources.c":734]:Unable to set appSysDir to default value - Using NULL
> > fatal:GetSysAppDir:Unable to get a default value for the system App Resource directory
> > warning:["Resources.c":734]:Unable to set appSysDir to default value - Using NULL
> > warning:Unable to Get System Resource File Name?
> > warning:WorkstationClassInitialize:Unable to access rgb color database - named colors unsupported:[errno=2]
> > NDV_COLORMAP_PATH environment variable not set:
> >        defaulting to .:$NCARG_ROOT/lib/ncarg/colormaps
> > warning:["Palette.c":1527]:NhlLoadColormapFiles: Invalid directory encountered in colormap path specification
> > fatal:Could not open ($NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl)
> > fatal:error at line 9 in file map_only_1.ncl
> > 
> > ---------NCL code-------------
> > ;================================================;
> > load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
> > load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"
> > ; ================================================;
> > begin
> > 
> >  wks  = gsn_open_wks("ps","maponly")    ; open a ps file
> >  plot = gsn_csm_map_ce(wks,False)        ; draw global map
> > 
> >  end
> > 
> > 
> > 
> > 
> > _______________________________________________
> > ncl-talk mailing list
> > List instructions, subscriber options, unsubscribe:
> > http://mailman.ucar.edu/mailman/listinfo/ncl-talk
> 
> 
> 
> 
> 
> 
> From: Mark Chan <cym263 at yahoo.com>
> Subject: Fw: [ncl-talk] NCL install into Cygwin
> Date: September 13, 2012 8:53:00 PM MDT
> To: "ncl-install at ucar.edu" <ncl-install at ucar.edu>
> Reply-To: Mark Chan <cym263 at yahoo.com>
> 
> 
> Dear NCL developer,
>  
> I would like to use NCL in cygwin. I want to ask why the ".bash_profile" was not executed automatically when I start up cygwin ( I have to do as "source .bash_profile" manually).
> I know this is a linux question but I would appreciate it if you could give any help.
>  
> With my best regards,
> Mark 
> 
> ----- Forwarded Message -----
> From: Mary Haley <haley at ucar.edu>
> To: Mark Chan <cym263 at yahoo.com> 
> Cc: NCL Helpline <ncl-talk at ucar.edu> 
> Sent: Wednesday, September 12, 2012 4:08 AM
> Subject: Re: [ncl-talk] NCL install into Cygwin
> 
> Dear Mark,
> 
> In the future, please post NCL installation questions to ncl-install at ucar.edu (http://mailman.ucar.edu/mailman/listinfo/ncl-install).
> 
> It looks like your NCARG_ROOT environment variable is not set, or is not set correctly. For information on setting NCARG_ROOT, read:
> 
> http://www.ncl.ucar.edu/Download/install.shtml#SetNCARG_ROOT
> 
> --Mary
> 
> On Sep 10, 2012, at 2:27 AM, Mark Chan wrote:
> 
> > 
> > Dear NCL developer,
> > 
> > I have installed Cygwin into my MS windows and also intall NCL into it. However, when I do a run test, got the error message as below.
> > I found I don"t have "ncarg" folder in the path as "$NCARG_ROOT/lib/ncarg". Could you please give some suggestion?
> > 
> > Thanks a lot!
> > Mark 
> > 
> > -------NCL run test-------------------------------------------
> > $ ncl map_only_1.ncl
> >  Copyright (C) 1995-2011 - All Rights Reserved
> >  University Corporation for Atmospheric Research
> >  NCAR Command Language Version 6.0.0
> >  The use of this software is governed by a License Agreement.
> >  See http://www.ncl.ucar.edu/ for more details.
> > warning:Unable to Get System Resource File Name?
> > warning:Unable to load System Resource File (null)
> > fatal:GetSysAppDir:Unable to get a default value for the system App Resource directory
> > warning:["Resources.c":734]:Unable to set appSysDir to default value - Using NULL
> > fatal:GetSysAppDir:Unable to get a default value for the system App Resource directory
> > warning:["Resources.c":734]:Unable to set appSysDir to default value - Using NULL
> > warning:Unable to Get System Resource File Name?
> > warning:WorkstationClassInitialize:Unable to access rgb color database - named colors unsupported:[errno=2]
> > NDV_COLORMAP_PATH environment variable not set:
> >        defaulting to .:$NCARG_ROOT/lib/ncarg/colormaps
> > warning:["Palette.c":1527]:NhlLoadColormapFiles: Invalid directory encountered in colormap path specification
> > fatal:Could not open ($NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl)
> > fatal:error at line 9 in file map_only_1.ncl
> > 
> > ---------NCL code-------------
> > ;================================================;
> > load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
> > load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"
> > ; ================================================;
> > begin
> > 
> >  wks  = gsn_open_wks("ps","maponly")    ; open a ps file
> >  plot = gsn_csm_map_ce(wks,False)        ; draw global map
> > 
> >  end
> > 
> > 
> > 
> > 
> > 
> > From: Mark Chan <cym263 at yahoo.com>
> > Subject: NCL install into Cygwin
> > Date: September 8, 2012 7:33:19 PM MDT
> > To: "ncl-install at ucar.edu" <ncl-install at ucar.edu>
> > Reply-To: Mark Chan <cym263 at yahoo.com>
> > 
> > 
> > Dear NCL developer,
> > 
> > I have installed Cygwin into my MS windows and also intall NCL into it. However, when I do a run test, got the error message as below.
> > I found I don"t have "ncarg" folder in the path as "$NCARG_ROOT/lib/ncarg". Could you please give some suggestion?
> > 
> > Thanks a lot!
> > Mark 
> > 
> > -------NCL run test-------------------------------------------
> > $ ncl map_only_1.ncl
> >  Copyright (C) 1995-2011 - All Rights Reserved
> >  University Corporation for Atmospheric Research
> >  NCAR Command Language Version 6.0.0
> >  The use of this software is governed by a License Agreement.
> >  See http://www.ncl.ucar.edu/ for more details.
> > warning:Unable to Get System Resource File Name?
> > warning:Unable to load System Resource File (null)
> > fatal:GetSysAppDir:Unable to get a default value for the system App Resource directory
> > warning:["Resources.c":734]:Unable to set appSysDir to default value - Using NULL
> > fatal:GetSysAppDir:Unable to get a default value for the system App Resource directory
> > warning:["Resources.c":734]:Unable to set appSysDir to default value - Using NULL
> > warning:Unable to Get System Resource File Name?
> > warning:WorkstationClassInitialize:Unable to access rgb color database - named colors unsupported:[errno=2]
> > NDV_COLORMAP_PATH environment variable not set:
> >        defaulting to .:$NCARG_ROOT/lib/ncarg/colormaps
> > warning:["Palette.c":1527]:NhlLoadColormapFiles: Invalid directory encountered in colormap path specification
> > fatal:Could not open ($NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl)
> > fatal:error at line 9 in file map_only_1.ncl
> > 
> > ---------NCL code-------------
> > ;================================================;
> > load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
> > load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"
> > ; ================================================;
> > begin
> > 
> >  wks  = gsn_open_wks("ps","maponly")    ; open a ps file
> >  plot = gsn_csm_map_ce(wks,False)        ; draw global map
> > 
> >  end
> > 
> > 
> > 
> > 
> > _______________________________________________
> > ncl-talk mailing list
> > List instructions, subscriber options, unsubscribe:
> > http://mailman.ucar.edu/mailman/listinfo/ncl-talk
> 
> 
> 
> 
> 
> _______________________________________________
> ncl-install mailing list
> List instructions, subscriber options, unsubscribe:
> http://mailman.ucar.edu/mailman/listinfo/ncl-install
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