[Dart-dev] DART/branches Revision: 11337

[dart at ucar.edu]

hendric at ucar.edu
2017-03-15 14:57:17 -0600 (Wed, 15 Mar 2017)
44
Updating non-backwards compatable changes.




Modified: DART/branches/rma_trunk/documentation/html/Manhattan_release.html
===================================================================
--- DART/branches/rma_trunk/documentation/html/Manhattan_release.html	2017-03-15 19:59:11 UTC (rev 11336)
+++ DART/branches/rma_trunk/documentation/html/Manhattan_release.html	2017-03-15 20:57:17 UTC (rev 11337)
@@ -178,17 +178,29 @@
 
 <ol>
 
-<li> We are no longer supporting DART formated restart files.  We can now
+<li> 
+We are no longer supporting DART formated restart files.  We can now
 directly read restart files in NetCDF format.  This is done by providing
-a 'input_state_file_list' and 'output_state_file_list' in the filter
-namelist.  
+a <code>'input_state_file_list'</code> and <code>'output_state_file_list'</code> 
+in the filter namelist.  
 </li>
 
-<li> Prior_Diag.nc and Posterior_Diag.nc have been broken up into multiple
-files.  Now we have options for writting out files in four stages of the
-assimilation code 'input', 'preassim', 'postassim', 'output'
+<li> 
+<em class=file>Prior_Diag.nc</em> and <em class=file> Posterior_Diag.nc</em> 
+have been broken up into multiple files.  Now we have options for writting out 
+files in four stages of the assimilation code 
+<code>'input', 'preassim', 'postassim', 'output'</code>. 
+This is set in the &amp;filter_nml  namelist with stages_to_write. Output files will
+be written to:
+  <ul><li> <em class=file>[stage]_member_####.nc</em></li>
+      <li> <em class=file>[stage]_mean.nc</em></li>
+      <li> <em class=file>[stage]_sd.nc</em></li>
+      <li> <em class=file>[stage]_priorinf_{mean,sd}.nc</em> (if prior inflation is turned on)</li>
+      <li> <em class=file>[stage]_postinf_{mean,sd}.nc</em>  (if posterior inflation is turned on)</li>
+  </ul>
 </li>
 
+
 <li> New model_mod.f90 required routines:
     <ul><li> <em class=code>vert_convert()</em></li>
         <li> <em class=code>query_vert_localization_coord()</em></li>
@@ -217,35 +229,46 @@
 </li>
 
 
-<li>namelist changes
+<li>
+There are several namelist changes, mainly in the &amp;filter_nml and 
+&amp;perfect_model_mod which are outlined in detail in 
+<a href="html/Manhattan_diffs_from_Lanai.html">Manhattan_diffs_from_Lanai</a>
 </li>
 
-<li> All modules have been moved to have moved to 
+<li> 
+     All modules have been moved to have moved to 
      <em class=dir>DART/assimilation_code/modules/</em> 
      directory. And similarly all of the programs have moved to 
      <em class=dir>DART/assimilation_code/programs/</em>
 </li>
 
-<li>The location modules which were stored in <em class=dir>locations</em> 
+<li>
+    The location modules which were stored in <em class=dir>locations</em> 
     have moved to <em class=dir>DART/assimilation_code/location</em> 
     directory
 </li>
 
-<li>The observation converters which were stored in <em class=dir>observations</em> 
+<li>
+    The observation converters which were stored in <em class=dir>observations</em> 
     have moved to <em class=dir>DART/observations/obs_converters</em> 
     directory
 </li>
 
-<li>The forward operators have moved from <em class=dir>obs_def/*mod</em> to
-<em class=dir>observations/forward_operators</em></li>
+<li>
+    The forward operators have moved from <em class=dir>obs_def/*mod</em> to
+    <em class=dir>observations/forward_operators</em>
+</li>
 
-<li>The tutorial files have moved to <em class=dir>DART/documentation/tutorial directory</em>
+<li>
+    The tutorial files have moved to 
+    <em class=dir>DART/documentation/tutorial directory</em>
 </li>
 
-<li>The program <em class=file>fill_inflation_restart</em> is OBSOLETE since
-DART inflation files are now in NetCDF format. Now inflation files can be filled
-using <em class=program>ncap2</em>.  Here is an exapmle using version 4.4.2 or later
-of the NCO tools:
+<li>
+   The program <em class=file>fill_inflation_restart</em> is OBSOLETE since
+   DART inflation files are now in NetCDF format. Now inflation files can be filled
+   using <em class=program>ncap2</em>.  Here is an exapmle using version 4.4.2 or later
+   of the NCO tools:
 <pre>
   ncap2 -s "T=1.0;U=1.0;V=1.0" wrfinput_d01 prior_inf.nc'
   ncap2 -s "T=0.6;U=0.6;V=0.6" wrfinput_d01 prior_sd.nc'
@@ -252,13 +275,119 @@
 </pre>
 </li>