[Dart-dev] [3716] DART/trunk/models/MITgcm_ocean/work:
Rename restart_file_utility to restart_file_tool; functionality remains
nancy at ucar.edu
nancy at ucar.edu
Mon Dec 15 11:57:30 MST 2008
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Modified: DART/trunk/models/MITgcm_ocean/work/input.nml
===================================================================
--- DART/trunk/models/MITgcm_ocean/work/input.nml 2008-12-15 18:20:30 UTC (rev 3715)
+++ DART/trunk/models/MITgcm_ocean/work/input.nml 2008-12-15 18:57:29 UTC (rev 3716)
@@ -159,23 +159,24 @@
logfilename = 'dart_log.out',
nmlfilename = 'dart_log.nml' /
-&restart_file_utility_nml
+&restart_file_tool_nml
input_file_name = "filter_restart",
output_file_name = "filter_updated_restart",
- ens_size = 1,
+ ens_size = 1,
single_restart_file_in = .true.,
single_restart_file_out = .true.,
- write_binary_restart_files = .false.,
+ write_binary_restart_files = .true.,
overwrite_data_time = .false.,
- new_data_days = -1,
- new_data_secs = -1,
+ new_data_days = -1,
+ new_data_secs = -1,
input_is_model_advance_file = .false.,
output_is_model_advance_file = .false.,
overwrite_advance_time = .false.,
- new_advance_days = -1,
- new_advance_secs = -1 /
+ new_advance_days = -1,
+ new_advance_secs = -1,
+ gregorian_cal = .true. /
-&merge_obs_seq_nml
+&obs_sequence_tool_nml
num_input_files = 7,
filename_seq = '../observations/ssh_pseudo.obs_seq.out',
'../observations/gliders_t_pseudo.obs_seq.out',
@@ -184,8 +185,48 @@
'../observations/adcp_u_pseudo.obs_seq.out',
'../observations/adcp_v_pseudo.obs_seq.out',
'../observations/tmi_pseudo.obs_seq.out',
- filename_out = 'obs_seq.out' /
+ filename_out = 'obs_seq.out',
+ gregorian_cal = .true. /
+# other possible obs tool namelist items:
+#
+# print out how many obs of each type are in the file:
+# print_only = .true.,
+#
+# keep only obs in time period:
+# first_obs_days = -1,
+# first_obs_seconds = -1,
+# last_obs_days = -1,
+# last_obs_seconds = -1,
+#
+# keep only obs in a bounding box:
+# min_lat = -90.0,
+# max_lat = 90.0,
+# min_lon = 0.0,
+# max_lon = 360.0,
+#
+# keep only the U and V radiosonde winds:
+# obs_types = 'RADIOSONDE_U_WIND_COMPONENT',
+# 'RADIOSONDE_V_WIND_COMPONENT',
+# keep_types = .true.,
+#
+# remove the U and V radiosonde winds:
+# obs_types = 'RADIOSONDE_U_WIND_COMPONENT',
+# 'RADIOSONDE_V_WIND_COMPONENT',
+# keep_types = .false.,
+#
+# keep only observations with a DART QC of 0:
+# qc_metadata = 'Dart quality control',
+# min_qc = 0,
+# max_qc = 0,
+#
+# keep only radiosonde temp obs between 250 and 300 K:
+# copy_metadata = 'NCEP BUFR observation',
+# copy_type = 'RADIOSONDE_TEMPERATURE',
+# min_copy = 250.0,
+# max_copy = 300.0,
+#
+
# The times in the namelist for the obs_diag program are vectors
# that follow the following sequence:
# year month day hour minute second
Deleted: DART/trunk/models/MITgcm_ocean/work/mkmf_merge_obs_seq
===================================================================
--- DART/trunk/models/MITgcm_ocean/work/mkmf_merge_obs_seq 2008-12-15 18:20:30 UTC (rev 3715)
+++ DART/trunk/models/MITgcm_ocean/work/mkmf_merge_obs_seq 2008-12-15 18:57:29 UTC (rev 3716)
@@ -1,15 +0,0 @@
-#!/bin/csh
-#
-# Data Assimilation Research Testbed -- DART
-# Copyright 2004-2007, Data Assimilation Research Section
-# University Corporation for Atmospheric Research
-# Licensed under the GPL -- www.gpl.org/licenses/gpl.html
-#
-# <next few lines under version control, do not edit>
-# $URL$
-# $Id$
-# $Revision$
-# $Date$
-#
-../../../mkmf/mkmf -p merge_obs_seq -t ../../../mkmf/mkmf.template -c"-Duse_netCDF" \
- -a "../../.." path_names_merge_obs_seq
Copied: DART/trunk/models/MITgcm_ocean/work/mkmf_obs_sequence_tool (from rev 3715, DART/trunk/models/MITgcm_ocean/work/mkmf_merge_obs_seq)
===================================================================
--- DART/trunk/models/MITgcm_ocean/work/mkmf_obs_sequence_tool (rev 0)
+++ DART/trunk/models/MITgcm_ocean/work/mkmf_obs_sequence_tool 2008-12-15 18:57:29 UTC (rev 3716)
@@ -0,0 +1,15 @@
+#!/bin/csh
+#
+# Data Assimilation Research Testbed -- DART
+# Copyright 2004-2007, Data Assimilation Research Section
+# University Corporation for Atmospheric Research
+# Licensed under the GPL -- www.gpl.org/licenses/gpl.html
+#
+# <next few lines under version control, do not edit>
+# $URL$
+# $Id$
+# $Revision$
+# $Date$
+#
+../../../mkmf/mkmf -p obs_sequence_tool -t ../../../mkmf/mkmf.template -c"-Duse_netCDF" \
+ -a "../../.." path_names_obs_sequence_tool
Copied: DART/trunk/models/MITgcm_ocean/work/mkmf_restart_file_tool (from rev 3715, DART/trunk/models/MITgcm_ocean/work/mkmf_restart_file_utility)
===================================================================
--- DART/trunk/models/MITgcm_ocean/work/mkmf_restart_file_tool (rev 0)
+++ DART/trunk/models/MITgcm_ocean/work/mkmf_restart_file_tool 2008-12-15 18:57:29 UTC (rev 3716)
@@ -0,0 +1,15 @@
+#!/bin/csh
+#
+# Data Assimilation Research Testbed -- DART
+# Copyright 2004-2007, Data Assimilation Research Section
+# University Corporation for Atmospheric Research
+# Licensed under the GPL -- www.gpl.org/licenses/gpl.html
+#
+# <next few lines under version control, do not edit>
+# $URL$
+# $Id$
+# $Revision$
+# $Date$
+#
+../../../mkmf/mkmf -p restart_file_tool -t ../../../mkmf/mkmf.template -c"-Duse_netCDF" \
+ -a "../../.." path_names_restart_file_tool
Deleted: DART/trunk/models/MITgcm_ocean/work/mkmf_restart_file_utility
===================================================================
--- DART/trunk/models/MITgcm_ocean/work/mkmf_restart_file_utility 2008-12-15 18:20:30 UTC (rev 3715)
+++ DART/trunk/models/MITgcm_ocean/work/mkmf_restart_file_utility 2008-12-15 18:57:29 UTC (rev 3716)
@@ -1,15 +0,0 @@
-#!/bin/csh
-#
-# Data Assimilation Research Testbed -- DART
-# Copyright 2004-2007, Data Assimilation Research Section
-# University Corporation for Atmospheric Research
-# Licensed under the GPL -- www.gpl.org/licenses/gpl.html
-#
-# <next few lines under version control, do not edit>
-# $URL$
-# $Id$
-# $Revision$
-# $Date$
-#
-../../../mkmf/mkmf -p restart_file_utility -t ../../../mkmf/mkmf.template -c"-Duse_netCDF" \
- -a "../../.." path_names_restart_file_utility
Deleted: DART/trunk/models/MITgcm_ocean/work/path_names_merge_obs_seq
===================================================================
--- DART/trunk/models/MITgcm_ocean/work/path_names_merge_obs_seq 2008-12-15 18:20:30 UTC (rev 3715)
+++ DART/trunk/models/MITgcm_ocean/work/path_names_merge_obs_seq 2008-12-15 18:57:29 UTC (rev 3716)
@@ -1,14 +0,0 @@
-assim_model/assim_model_mod.f90
-common/types_mod.f90
-cov_cutoff/cov_cutoff_mod.f90
-location/threed_sphere/location_mod.f90
-models/MITgcm_ocean/model_mod.f90
-obs_def/obs_def_mod.f90
-obs_kind/obs_kind_mod.f90
-obs_sequence/merge_obs_seq.f90
-obs_sequence/obs_sequence_mod.f90
-random_nr/random_nr_mod.f90
-random_seq/random_seq_mod.f90
-time_manager/time_manager_mod.f90
-utilities/utilities_mod.f90
-mpi_utilities/null_mpi_utilities_mod.f90
Copied: DART/trunk/models/MITgcm_ocean/work/path_names_obs_sequence_tool (from rev 3715, DART/trunk/models/MITgcm_ocean/work/path_names_merge_obs_seq)
===================================================================
--- DART/trunk/models/MITgcm_ocean/work/path_names_obs_sequence_tool (rev 0)
+++ DART/trunk/models/MITgcm_ocean/work/path_names_obs_sequence_tool 2008-12-15 18:57:29 UTC (rev 3716)
@@ -0,0 +1,14 @@
+assim_model/assim_model_mod.f90
+common/types_mod.f90
+cov_cutoff/cov_cutoff_mod.f90
+location/threed_sphere/location_mod.f90
+models/MITgcm_ocean/model_mod.f90
+obs_def/obs_def_mod.f90
+obs_kind/obs_kind_mod.f90
+obs_sequence/obs_sequence_mod.f90
+obs_sequence/obs_sequence_tool.f90
+random_nr/random_nr_mod.f90
+random_seq/random_seq_mod.f90
+time_manager/time_manager_mod.f90
+utilities/utilities_mod.f90
+mpi_utilities/null_mpi_utilities_mod.f90
Copied: DART/trunk/models/MITgcm_ocean/work/path_names_restart_file_tool (from rev 3715, DART/trunk/models/MITgcm_ocean/work/path_names_restart_file_utility)
===================================================================
--- DART/trunk/models/MITgcm_ocean/work/path_names_restart_file_tool (rev 0)
+++ DART/trunk/models/MITgcm_ocean/work/path_names_restart_file_tool 2008-12-15 18:57:29 UTC (rev 3716)
@@ -0,0 +1,19 @@
+adaptive_inflate/adaptive_inflate_mod.f90
+assim_model/assim_model_mod.f90
+assim_tools/assim_tools_mod.f90
+common/types_mod.f90
+cov_cutoff/cov_cutoff_mod.f90
+ensemble_manager/ensemble_manager_mod.f90
+location/threed_sphere/location_mod.f90
+models/MITgcm_ocean/model_mod.f90
+mpi_utilities/null_mpi_utilities_mod.f90
+obs_def/obs_def_mod.f90
+obs_kind/obs_kind_mod.f90
+obs_sequence/obs_sequence_mod.f90
+random_nr/random_nr_mod.f90
+random_seq/random_seq_mod.f90
+reg_factor/reg_factor_mod.f90
+sort/sort_mod.f90
+time_manager/time_manager_mod.f90
+utilities/restart_file_tool.f90
+utilities/utilities_mod.f90
Deleted: DART/trunk/models/MITgcm_ocean/work/path_names_restart_file_utility
===================================================================
--- DART/trunk/models/MITgcm_ocean/work/path_names_restart_file_utility 2008-12-15 18:20:30 UTC (rev 3715)
+++ DART/trunk/models/MITgcm_ocean/work/path_names_restart_file_utility 2008-12-15 18:57:29 UTC (rev 3716)
@@ -1,19 +0,0 @@
-adaptive_inflate/adaptive_inflate_mod.f90
-assim_model/assim_model_mod.f90
-assim_tools/assim_tools_mod.f90
-common/types_mod.f90
-cov_cutoff/cov_cutoff_mod.f90
-ensemble_manager/ensemble_manager_mod.f90
-location/threed_sphere/location_mod.f90
-models/MITgcm_ocean/model_mod.f90
-mpi_utilities/null_mpi_utilities_mod.f90
-obs_def/obs_def_mod.f90
-obs_kind/obs_kind_mod.f90
-obs_sequence/obs_sequence_mod.f90
-random_nr/random_nr_mod.f90
-random_seq/random_seq_mod.f90
-reg_factor/reg_factor_mod.f90
-sort/sort_mod.f90
-time_manager/time_manager_mod.f90
-utilities/restart_file_utility.f90
-utilities/utilities_mod.f90
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