[Wrf-users] Fwd: Error in running ./wrf.exe
Muhammadhn Muhammadh Khalid
kmmuhammadh at gmail.com
Tue Jul 19 10:38:53 MDT 2016
Dear Users,
I ran the ./wrf.exe comand after putting screen. Later when I attach the
screen and see I'm getting the following error message. can you please help
me?
hpcuser1 at aiken:~$ screen -r 59145
Timing for main: time 2005-09-04_09:08:20 on domain 3: 1.05192 elapsed
seconds
Timing for main: time 2005-09-04_09:08:40 on domain 3: 1.05568 elapsed
seconds
Timing for main: time 2005-09-04_09:09:00 on domain 3: 1.05700 elapsed
seconds
Timing for main: time 2005-09-04_09:09:00 on domain 2: 4.98925 elapsed
seconds
Timing for main: time 2005-09-04_09:09:00 on domain 1: 17.27786 elapsed
seconds
WOULD GO OFF TOP: KF_ETA_PARA I,J,DPTHMX,DPMIN 23 17
NaN 5000.00000
Program received signal SIGSEGV: Segmentation fault - invalid memory
reference.
Backtrace for this error:
#0 0x7F504338D777
#1 0x7F504338DD7E
#2 0x7F5042AC9CAF
#3 0x20CC7CC in __module_cu_kfeta_MOD_kf_eta_para
#4 0x20E3FC7 in __module_cu_kfeta_MOD_kf_eta_cps
#5 0x1B3A205 in __module_cumulus_driver_MOD_cumulus_driver
#6 0x1583457 in __module_first_rk_step_part1_MOD_first_rk_step_part1
#7 0xFEF6A7 in solve_em_
#8 0xEFB6B6 in solve_interface_
#9 0x46402A in __module_integrate_MOD_integrate
#10 0x404AE3 in __module_wrf_top_MOD_wrf_run
Segmentation fault (core dumped)
Following is my namelist file for wrf
&time_control
run_days = 1,
run_hours = 0,
run_minutes = 0,
run_seconds = 0,
start_year = 2005, 2005, 2005,
start_month = 09, 09, 09,
start_day = 03, 03, 03,
start_hour = 18, 18, 18,
start_minute = 00, 00, 00,
start_second = 00, 00, 00,
end_year = 2005, 2005, 2005,
end_month = 09, 09, 09,
end_day = 04, 04, 04,
end_hour = 18, 18, 18,
end_minute = 00, 00, 00,
end_second = 00, 00, 00,
interval_seconds = 21600,
input_from_file = .true., .true., .true.,
history_interval = 180, 60, 60,
frames_per_outfile = 1000, 1000, 1000,
restart = .false.,
restart_interval = 5000,
io_form_history = 2,
io_form_restart = 2,
io_form_input = 2,
io_form_boundary = 2,
debug_level = 0,
/
&domains
eta_levels = 1.000, 0.9655, 0.931, 0.8966, 0.8621,
0.8276, 0.7931, 0.7586, 0.7241, 0.6897,
0.6552, 0.6207, 0.5862, 0.5517, 0.5172,
0.4828, 0.4483, 0.4138, 0.3793, 0.3448,
0.3103, 0.2759, 0.2414, 0.2069, 0.1724,
0.1379, 0.1034, 0.069, 0.0345, 0.000,
time_step = 180,
time_step_fract_num = 0,
time_step_fract_den = 1,
max_dom = 3,
e_we = 100, 88, 73,
e_sn = 109, 97, 82,
e_vert = 30, 30, 30,
p_top_requested = 5000.0,
num_metgrid_levels = 27,
num_metgrid_soil_levels = 4,
dx = 30000, 10000, 3333.333,
dy = 30000, 10000, 3333.333,
grid_id = 1, 2, 3,
parent_id = 1, 1, 2,
i_parent_start = 1, 36, 30,
j_parent_start = 1, 40, 32,
parent_grid_ratio = 1, 3, 3,
parent_time_step_ratio = 1, 3, 3,
feedback = 1,
smooth_option = 0,
/
&physics
mp_physics = 2, 2, 2,
ra_lw_physics = 1, 1, 1,
ra_sw_physics = 3, 3, 3,
radt = 30, 30, 30,
sf_sfclay_physics = 1, 1, 1,
sf_surface_physics = 2, 2, 2,
bl_pbl_physics = 1, 1, 1,
bldt = 0, 0, 0,
cu_physics = 1, 1, 1,
cudt = 5, 5, 5,
isfflx = 1,
ifsnow = 0,
icloud = 1,
surface_input_source = 1,
num_soil_layers = 4,
sf_urban_physics = 0, 0, 0,
maxiens = 1,
maxens = 3,
maxens2 = 3,
maxens3 = 16,
ensdim = 144,
/
&fdda
/
&dynamics
w_damping = 0,
diff_opt = 1,
km_opt = 4,
diff_6th_opt = 0, 0, 0,
diff_6th_factor = 0.12, 0.12, 0.12,
base_temp = 290.,
damp_opt = 0,
zdamp = 5000., 5000., 5000.,
dampcoef = 0.2, 0.2, 0.2,
khdif = 0, 0, 0,
kvdif = 0, 0, 0,
non_hydrostatic = .true., .true., .true.,
moist_adv_opt = 1, 1, 1,
scalar_adv_opt = 1, 1, 1,
/
&bdy_control
spec_bdy_width = 5,
spec_zone = 1,
relax_zone = 4,
specified = .true., .false., .false.,
nested = .false., .true., .true.,
/
&grib2
/
&namelist_quilt
nio_tasks_per_group = 0,
nio_groups = 1,
/
Following is the namelist of my WPS
&share
wrf_core = 'ARW',
max_dom = 3,
start_date = '2005-09-03_18:00:00', '2005-09-03_18:00:00', '
2005-09-03_18:00:00',
end_date = '2005-09-04_18:00:00', '2005-09-04_18:00:00', '
2005-09-04_18:00:00',
interval_seconds = 21600,
io_form_geogrid = 2,
opt_output_from_geogrid_path =
'/export/localhome/hpcuser1/RUNS/calibration/mphysics2002.05.10/wps/',
debug_level = 0,
/
&geogrid
parent_id = 1,1,2,
parent_grid_ratio = 1,3,3,
i_parent_start = 1,36,30,
j_parent_start = 1,40,32,
e_we = 100,88,73,
e_sn = 109,97,82,
geog_data_res = '10m','10m','10m',
dx = 30000,
dy = 30000,
map_proj = 'mercator',
ref_lat = 7.519,
ref_lon = 80.952,
truelat1 = 7.519,
truelat2 = 0,
stand_lon = 80.952,
geog_data_path = '/export/localhome/hpcuser1/GEO_DATA/',
opt_geogrid_tbl_path =
'/export/localhome/hpcuser1/RUNS/calibration/mphysics2002.05.10/wps/',
ref_x = 50.0,
ref_y = 54.5,
/
&ungrib
out_format = 'WPS',
prefix = 'FNL',
/
&metgrid
fg_name = 'FNL',
io_form_metgrid = 2,
opt_output_from_metgrid_path =
'/export/localhome/hpcuser1/RUNS/calibration/mphysics2002.05.10/wps/',
opt_metgrid_tbl_path =
'/export/localhome/hpcuser1/RUNS/calibration/mphysics2002.05.10/wps/',
/
&mod_levs
press_pa = 201300 , 200100 , 100000 ,
95000 , 90000 ,
85000 , 80000 ,
75000 , 70000 ,
65000 , 60000 ,
55000 , 50000 ,
45000 , 40000 ,
35000 , 30000 ,
25000 , 20000 ,
15000 , 10000 ,
5000 , 1000
/
&domain_wizard
grib_data_path = '/export/localhome/hpcuser1/Gribb_data/2005.05.10/',
grib_vtable = 'Vtable.GFS',
dwiz_name =New
dwiz_desc =
dwiz_user_rect_x1 =1367
dwiz_user_rect_y1 =357
dwiz_user_rect_x2 =1570
dwiz_user_rect_y2 =572
dwiz_show_political =true
dwiz_center_over_gmt =true
dwiz_latlon_space_in_deg =10
dwiz_latlon_linecolor =-8355712
dwiz_map_scale_pct =12.5
dwiz_map_vert_scrollbar_pos =0
dwiz_map_horiz_scrollbar_pos =0
dwiz_gridpt_dist_km =30.0
dwiz_mpi_command =
dwiz_tcvitals =null
dwiz_bigmap =Y
/
--
Regards,
Muhammadh M Khalid
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