[Wrf-users] Errors in compiling geogrid.exe in WPS

ashwinD12 . winash12 at gmail.com
Wed Jul 16 08:21:36 MDT 2014


Since WRF 3.6 compiled correctly why do I get these linking errors in WPS
's geogrid.exe -

SUFFIXES: .F .f .c .o

SHELL                   =       /bin/sh

NCARG_LIBS              =       -L$(NCARG_ROOT)/lib -lncarg -lncarg_gks
-lncarg_
c \
                                -L/usr/X11R6/lib -lX11

NCARG_LIBS2             =       # May be overridden by architecture
specific val
ue below

FDEFS                   =       -DUSE_JPEG2000 -DUSE_PNG

# Listing of options that are usually independent of machine type.
# When necessary, these are over-ridden by each architecture.

ARFLAGS                 =

PERL                    =       perl

RANLIB                  =       echo

COMPILING_ON_CYGWIN_NT = yes

WRF_INCLUDE     =       -I$(WRF_DIR)/external/io_netcdf \
                        -I$(WRF_DIR)/external/io_grib_share \
                        -I$(WRF_DIR)/external/io_grib1 \
                        -I$(WRF_DIR)/external/io_int \
                        -I$(WRF_DIR)/inc \
                        -I$(NETCDF)/include

WRF_LIB         =       -L$(WRF_DIR)/external/io_grib1 -lio_grib1 \
                        -L$(WRF_DIR)/external/io_grib_share -lio_grib_share
\
                        -L$(WRF_DIR)/external/io_int -lwrfio_int \
                        -L$(WRF_DIR)/external/io_netcdf -lwrfio_nf \
                        -L$(NETCDF)/lib -lnetcdff -lnetcdf


COMPRESSION_LIBS        =  # intentionally left blank, fill in
COMPRESSION_LIBS
below

COMPRESSION_INC         =  # intentionally left blank, fill in
COMPRESSION_INC b
elow

#
#   Settings for CYGWIN_NT i686 x86_64 PGI compiler on Windows    (serial)
#
#
COMPRESSION_LIBS    = -L/usr/local/lib -ljasper -lpng -lz
COMPRESSION_INC     = -I/usr/local/include/jasper
FDEFS               = -DUSE_JPEG2000 -DUSE_PNG
#NCARG_LIBS2        = -L${PGI}/linux86/6.1/lib -lpgftnrtl -lpgc \
#                     -L/usr/lib/gcc-lib/i386-redhat-linux/3.2.3 -lg2c
WRF_LIB             = $(WRF_DIR)/external/io_grib1/libio_grib1.a \
                      $(WRF_DIR)/external/io_grib_share/libio_grib_share.a \
                      $(WRF_DIR)/external/io_int/libwrfio_int.a \
                      $(WRF_DIR)/external/io_netcdf/libwrfio_nf.a \
                      $(NETCDF)/lib/libnetcdf.a                   \
                      $(NETCDF)/lib/libnetcdff.a
SFC                 = gfortran
SCC                 = gcc
DM_FC               = mpif90 -f90=$(SFC)
DM_CC               = mpicc  -cc=$(SCC)
FC                  = $(SFC)
CC                  = $(SCC)
LD                  = $(SFC)
FFLAGS              = -ffree-form -ffree-line-length-none -O
-fconvert=big-endia
n  -frecord-marker=4
F77FLAGS            = -ffree-form -O -fconvert=big-endian  -frecord-marker=4
FCSUFFIX            =
FNGFLAGS            = $(FFLAGS)
LDFLAGS             = -g
CFLAGS              = -g
CPP                 = /lib/cpp -C -P
CPPFLAGS            = -D_UNDERSCORE -DBYTESWAP -DWIN32 -DIO_NETCDF
-DIO_BINARY -
DIO_GRIB1 -DBIT32
ARFLAGS             =

################################################################################
########################################
#
#       Macros, these should be generic for all machines

LN              =       ln -sf
MAKE            =       make -i -r
RM              =       /bin/rm -f
CP              =       /bin/cp
AR              =       ar ru

.IGNORE:
.SUFFIXES: .c .f .F .o

#       There is probably no reason to modify these rules

.c.o:
        $(RM) $@
        $(CC) $(CPPFLAGS) $(CFLAGS) -c $<

.f.o:
        $(RM) $@ $*.mod
        $(FC) $(F77FLAGS) -c $< $(WRF_INCLUDE)

.F.o:
        $(RM) $@ $*.mod
        $(CPP) $(CPPFLAGS) $(FDEFS) $(WRF_INCLUDE) $< > $*.f90
        $(FC) $(FFLAGS) -c $*.f90 $(WRF_INCLUDE)
#       $(RM) $*.f90



And here is my log file


gfortran -g -o geogrid.exe cio.o wrf_debug.o bitarray_module.o
constants_module.o module_stringutil.o geogrid.o gridinfo_module.o
hash_module.o interp_module.o list_module.o llxy_module.o
misc_definitions_module.o module_debug.o module_map_utils.o output_module.o
parallel_module.o process_tile_module.o proc_point_module.o queue_module.o
read_geogrid.o smooth_module.o source_data_module.o \
../../../WRFV3/frame/module_driver_constants.o \
../../../WRFV3/frame/pack_utils.o ../../../WRFV3/frame/module_machine.o \
../../../WRFV3/frame/module_internal_header_util.o \
-I../../../WRFV3/external/io_netcdf -I../../../WRFV3/external/io_grib_share
-I../../../WRFV3/external/io_grib1 -I../../../WRFV3/external/io_int
-I../../../WRFV3/inc -I/home/lenovo/gz/WPS/netcdf_links/include \
../../../WRFV3/external/io_grib1/libio_grib1.a
../../../WRFV3/external/io_grib_share/libio_grib_share.a
../../../WRFV3/external/io_int/libwrfio_int.a
../../../WRFV3/external/io_netcdf/libwrfio_nf.a
/home/lenovo/gz/WPS/netcdf_links/lib/libnetcdf.a
/home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a \
/home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a(fort-misc.o): In function
`nf_inq_libvers_':
/home/lenovo/gz/netcdf-fortran-4.2/fortran/fort-misc.c:20: undefined
reference to `nc_inq_libvers'
/home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a(fort-misc.o): In function
`nf_strerror_':
/home/lenovo/gz/netcdf-fortran-4.2/fortran/fort-misc.c:36: undefined
reference to `nc_strerror'
/home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a(fort-varaio.o): In
function `nf_put_vara_text_':
/home/lenovo/gz/netcdf-fortran-4.2/fortran/fort-varaio.c:22: undefined
reference to `nc_put_vara_text'
/home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a(fort-varaio.o): In
function `nf_get_vara_text_':
/home/lenovo/gz/netcdf-fortran-4.2/fortran/fort-varaio.c:29: undefined
reference to `nc_get_vara_text'
/home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a(fort-varaio.o): In
function `nf_put_vara_int1_':
/home/lenovo/gz/netcdf-fortran-4.2/fortran/fort-varaio.c:37: undefined
reference to `nc_put_vara_schar'
/home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a(fort-varaio.o): In
function `nf_get_vara_int1_':
/home/lenovo/gz/netcdf-fortran-4.2/fortran/fort-varaio.c:55: undefined
reference to `nc_get_vara_schar'
/home/lenovo/gz/WPS/netcdf_links/lib/libnetcdff.a(fort-varaio.o): In
function `nf_put_vara_int2_':
/home/lenovo/gz/netcdf-fortran-4.2/fortran/fort-varaio.c:73: undefined
reference to `nc_put_vara_short'
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