[Wrf-users] installing netcdf-4.1.3

[Oleksandr Huziy]

There is a key that you have to specify when doing configure:

./configure --with-hdf5=/usr/local/hdf5-1.8.9/gcc

But I am not sure. If the above won't work try specifying the env variable
export HDF5_DIR=/usr/local/hdf5-1.8.9/gcc

Is there INSTALL or README file, there you could find more information.

Cheers




2014-06-23 16:18 GMT-04:00 David Smith <dsmith at uvi.edu>:

>     I would greatly appreciate any suggestions for the following issue.
>  Netcdf-4.1.3 was installed with netcdf-4 disabled.  I want to install
> ncview 2.1.2 (1.93 can't read the wrfout files), so I need to recompile
> with netcdf-4 enabled.
>
>    The problem is that configure fails, with the message that it can't
> find hdf5.
>
>
>  configure: error: Can't find or link to the hdf5 library. Use
> --disable-netcdf-4, or see config.log for errors. ( I can send the log if
> needed.)
>
>
>
>  In the compile log it has
>
>
>  PATH: /usr/local/hdf5-1.8.9/gcc/bin
>
>
>  and that path is correct.
>
>
>  *The only errors in the config.log file (that I can easily
> spot recognize) are many sequences like the following:*
>
>
>
>  configure: failed program was:
> | /* confdefs.h */
>  | #define PACKAGE_NAME "netCDF"
> | #define PACKAGE_TARNAME "netcdf"
> | #define PACKAGE_VERSION "4.1.3"
> | #define PACKAGE_STRING "netCDF 4.1.3"
> | #define PACKAGE_BUGREPORT "support-netcdf at unidata.ucar.edu"
> | #define PACKAGE_URL ""
>  | #define PACKAGE "netcdf"
> | #define VERSION "4.1.3"
> | #define NCIO_MINBLOCKSIZE 256
> | #define USE_FSYNC 1
> | #define DEFAULT_CHUNK_SIZE 4194304
> | #define MAX_DEFAULT_CACHE_SIZE 67108864
> | #define DEFAULT_CHUNKS_IN_CACHE 10
> | #define CHUNK_CACHE_SIZE 4194304
> | #define CHUNK_CACHE_NELEMS 1009
> | #define CHUNK_CACHE_PREEMPTION 0.75
> | #define HAVE_LIBCURL 1
> | #define USE_DAP 1
> | #define ENABLE_DAP 1
> | #define ENABLE_DAP_REMOTE_TESTS 1
> | #define USE_EXTREME_NUMBERS 1
> | #define TEMP_LARGE "."
> | #define HAVE_CURLOPT_KEYPASSWD 1
> | /* end confdefs.h.  */
> | #include <ac_nonexistent.h>
> configure:10726: result: gcc -E
> configure:10746: gcc -E  conftest.c
> configure:10746: $? = 0
> configure:10760: gcc -E  conftest.c
> conftest.c:26:28: error: ac_nonexistent.h: No such file or directory
> configure:10760: $? = 1
>
> *and also many examples of items such as:*
>
>  conftest.c:4: warning: incompatible implicit declaration of built-in
> function 'exit'
>
>  *Thanks!*
>
>
> *Dave Smith *
>
>
>
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>


-- 
Sasha
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