[Wrf-users] WRF v3.5.1 compilation errors, ifort v14. What do I miss?

Mahally Kudsy mkudsy at gmail.com
Mon Mar 3 15:38:32 MST 2014


Hi, may I ask you why do you select dmpar? dmpar is used for distributed
memory paralel computing. If you want to use on a multicore single cpu
workstation, I suggest you to select just smpar. Good luck.
On Mar 4, 2014 12:05 AM, "Бакиров, Медер" <bakirov at almetico.com> wrote:

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> Dear Sirs!
>
> Can you, please, help me to successfully build WRF v.3.5.1?
>
> I'm trying to compile WRF 3.5.1 using Intel compiler, but
> unfortunately stuck with the following error:
> ------------------------
> mpif90 -f90=ifort -o module_bl_temf.o -c -O3 -ip -fp-model precise -w
> -ftz -align all -fno-alias -FR -convert big_endian    -I../dyn_em
> -I../dyn_nmm   -I/home/dotcoder/src/WRFV3/external/esmf_time_f90
> -I/home/dotcoder/src/WRFV3/main -I/
> home/dotcoder/src/WRFV3/external/io_netcdf
> -I/home/dotcoder/src/WRFV3/external/io_int
> -I/home/dotcoder/src/WRFV3/frame -I/home/dotcoder/src/WRFV3/share
> -I/home/dotcoder/src/WRFV3/phys -I/home/dotcoder/src/WRFV3/chem
> -I/home/dotcoder/src/
> WRFV3/inc -I/usr/local/netcdf-4.3.1.1//include  -i4  module_bl_temf.f90
> catastrophic error: **Internal compiler error: segmentation violation
> signal raised** Please report this error along with the circumstances
> in which it occurred in a Software Problem Report.  Note: File and
> line given may not be explicit
>  cause of this error.
> compilation aborted for module_bl_temf.f90 (code 1)
> make[3]: [module_bl_temf.o] Error 1 (ignored)
> ------------------------
>
> I have a RHEL 5.10 x86_64 system installed.
>
> In WRF configure menu, I select:
> ------------------------
> 19.  Linux x86_64 i486 i586 i686, ifort compiler with icc  (dmpar)
> ------------------------
>
> Intel Compiler Version:
> ------------------------
> Intel(R) Fortran Intel(R) 64 Compiler XE for applications running on
> Intel(R) 64, Version 14.0.2.144 Build 20140120
> Copyright (C) 1985-2014 Intel Corporation.  All rights reserved.
> FOR NON-COMMERCIAL USE ONLY
> ------------------------
>
> All prerequisite software is built with Intel compiler:
> ------------------------
> - netcdf-4.3.1.1
> - mpich-3.1
> - jasper-1.900.1
> - hdf5-1.8.12
> - libpng-1.6.9
> - szip-2.1
> - zlib-1.2.8
> ------------------------
>
> Flags are set to:
> ------------------------
> export CC=icc
> export CXX=icpc
> export CFLAGS='-O3 -xHost -ip -no-prec-div -static-intel'
> export CXXFLAGS='-O3 -xHost -ip -no-prec-div -static-intel'
> export F77=ifort
> export FC=ifort
> export F90=ifort
> export FFLAGS='-O3 -xHost -ip -no-prec-div -static-intel'
> export CPP='icc -E'
> export CXXCPP='icpc -E'
> ------------------------
>
> I have the following environment variables:
> ------------------------
> NETCDF=/usr/local/netcdf-4.3.1.1/
> JASPERINC=/usr/local/jasper-1.900.1/include/
> JASPERLIB=/usr/local/jasper-1.900.1/lib/
>
> INCLUDE=/opt/include/:/opt/intel/composer_xe_2013_sp1.2.144/mkl/include:/opt/intel/composer_xe_2013_sp1.2.144/mkl/include:/opt/intel/composer_xe_2013_sp1.2.144/mkl/include:/opt/intel/composer_xe_2013_sp1.2.144/mkl/include:/usr/local/mpich-3.1/include/:/usr/local/netcdf-4.3.1.1/include/:/usr/local/hdf5-1.8.12/include/:/usr/local/jasper-1.900.1/include/:/usr/local/zlib-1.2.8/include/:/usr/local/szip-2.1/include/:/usr/local/libpng-1.6.9/include/
> ------------------------
>
> Please, find an attachment for a full gzipped compile log file.
>
> What more information should I provide?
>
> Thanks!
>
> With the best regards,
> Meder Bakirov
>
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