[Wrf-users] problem in running WRFV3.5 with INTEL compiler

Mehran Khodamorad mkhodamorad at gmail.com
Sat Jan 4 03:32:29 MST 2014


Many thanks for your help.I got m4 and installed it on my linux then every
thing is ok.
Regards
Mehran
On Saturday, January 4, 2014, Mehran Khodamorad wrote:

>
>
> On Saturday, January 4, 2014, Fotis Georgatos wrote:
>
> Hi Mehran,
>
> if you already use modules at your site, why not give a try to EasyBuild,
> whereby much of the dependency mess is taken care for you?
>
> M4 is simply one of the declared dependencies in the filthy set defined
> for WRF/3.5,
> look below:
>
> ```
> fgeorgatos at gaia-59:~: $ module load EasyBuild
> fgeorgatos at gaia-59:~: $ eb --version ### which easybuild version are we
> about to run
> This is EasyBuild 1.10.0 (framework: 1.10.0, easyblocks: 1.10.0) on host
> gaia-59.
> fgeorgatos at gaia-59:~: $ eb -S wrf-3.5|grep ictce ### ictce is about Intel
> cluster suite
>  * $CFGS1/WRF-3.5-ictce-4.1.13-dmpar.eb
>  * $CFGS1/WRF-3.5-ictce-5.3.0-dmpar.eb
>  * $CFGS1/WRF-3.5.1-ictce-4.1.13-dmpar.eb
>  * $CFGS1/WRF-3.5.1-ictce-5.3.0-dmpar.eb
> fgeorgatos at gaia-59:~: $ eb -D WRF-3.5.1-ictce-5.3.0-dmpar.eb -r ###
> dry-run of a recursive build
> == temporary log file in case of crash
> /tmp/easybuild-Hvv73p/easybuild-KE4jYH.log
> Dry run: printing build status of easyconfigs and dependencies
>
> CFGS=/opt/apps/HPCBIOS.20131224/software/EasyBuild/1.10.0/lib/python2.6/site-packages/easybuild_easyconfigs-1.10.0.0-py2.6.egg/easybuild/easyconfigs
>  * [x] $CFGS/i/icc/icc-2013.3.163.eb (module: icc/2013.3.163)
>  * [x] $CFGS/i/ifort/ifort-2013.3.163.eb (module: ifort/2013.3.163)
>  * [x] $CFGS/i/impi/impi-4.1.0.030.eb (module: impi/4.1.0.030)
>  * [x] $CFGS/i/imkl/imkl-11.0.3.163.eb (module: imkl/11.0.3.163)
>  * [x] $CFGS/i/ictce/ictce-5.3.0.eb (module: ictce/5.3.0)
>  * [x] $CFGS/n/ncurses/ncurses-5.9-ictce-5.3.0.eb (module:
> ncurses/5.9-ictce-5.3.0)
>  * [ ] $CFGS/j/JasPer/JasPer-1.900.1-ictce-5.3.0.eb (module:
> JasPer/1.900.1-ictce-5.3.0)
>  * [x] $CFGS/t/tcsh/tcsh-6.18.01-ictce-5.3.0.eb (module:
> tcsh/6.18.01-ictce-5.3.0)
>  * [x] $CFGS/z/zlib/zlib-1.2.7-ictce-5.3.0.eb (module:
> zlib/1.2.7-ictce-5.3.0)
>  * [x] $CFGS/s/Szip/Szip-2.1-ictce-5.3.0.eb (module: Szip/2.1-ictce-5.3.0)
>  * [x] $CFGS/h/HDF5/HDF5-1.8.10-ictce-5.3.0-gpfs.eb (module:
> HDF5/1.8.10-ictce-5.3.0-gpfs)
>  * [x] $CFGS/f/flex/flex-2.5.37-ictce-5.3.0.eb (module:
> flex/2.5.37-ictce-5.3.0)
>  * [x] $CFGS/m/M4/M4-1.4.16-ictce-5.3.0.eb (module: M4/1.4.16-ictce-5.3.0)
>  * [x] $CFGS/b/Bison/Bison-2.7-ictce-5.3.0.eb (module:
> Bison/2.7-ictce-5.3.0)
>  * [x] $CFGS/d/Doxygen/Doxygen-1.8.3.1-ictce-5.3.0.eb (module:
> Doxygen/1.8.3.1-ictce-5.3.0)
>  * [x] $CFGS/n/netCDF/netCDF-4.2.1.1-ictce-5.3.0.eb (module:
> netCDF/4.2.1.1-ictce-5.3.0)
>  * [x] $CFGS/n/netCDF-Fortran/netCDF-Fortran-4.2-ictce-5.3.0.eb (module:
> netCDF-Fortran/4.2-ictce-5.3.0)
>  * [ ] $CFGS/w/WRF/WRF-3.5.1-ictce-5.3.0-dmpar.eb (module:
> WRF/3.5.1-ictce-5.3.0-dmpar)
> == temporary log file /tmp/easybuild-Hvv73p/easybuild-KE4jYH.log has been
> removed.
> == temporary directory /tmp/easybuild-Hvv73p has been removed.
> fgeorgatos at gaia-59:~: $
> ```
>
> fyi.
> the version of icc compiler 13.1.3, corresponds to module `icc/2013.5.192`
> and `ictce/5.5.0` (the superset including icc, ifort, impi, imkl`.
> You can obtain those builds trivially/easily, eg with:
> `eb M4-1.4.16-ictce-5.3.0.eb --try-toolchain=ictce,5.5.0`
> Iterating over the above list in this way should get you exactly where you
> want!
>
> btw.
> Hint: do not use environment-modules less than v3.2.10;
> they are buggy and painful to handle and such a big waste of time.
>
> enjoy,
> Fotis
>
>
>
> On Fri, Jan 3, 2014 at 4:22 PM, Mehran Khodamorad <mkhodamorad at gmail.com>wrote:
>
> Dear all,
> Happy New Year
> There are some of errors when i compiles WRFV3.5 with Ifort & Icc in the
> version of 13.1.3 on my PC. I have sent you the files including
> configuration and compile texts. I would be appreciated if anyone could
> help me.
>
>
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