<div dir="ltr"><div>Hi, <br></div><div><br></div><div>This is hard to diagnose, and I don't really have useful advice for you. I'm presuming you are on a linux machine. I tried a fresh install on my linux box, with "conda create -n ncl_stable -c conda-forge ncl". That library libgsl.*.so is definitely part of the installation, under ~/miniconda3/envs/ncl_stable/lib. The resultant ncl works just fine -- I don't get unresolved library issues. Same with my Mac. Wish I had something more useful to tell you...</div><div><br></div><div>Rick</div><div><br></div><div><br></div><div> <br></div><div><br></div><div><br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Fri, Nov 11, 2022 at 10:58 PM Anie K Lal via ncl-talk <<a href="mailto:ncl-talk@mailman.ucar.edu">ncl-talk@mailman.ucar.edu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">Hi all,<br>
I am facing a issue with ncl installation. Please see the forwaded mail <br>
below. Kindly help.<br>
<br>
-------- Original Message --------<br>
Subject: libgsl.so.25: cannot open shared object file<br>
Date: 13.08.2022 11:48<br>
From: Anie K Lal <<a href="mailto:Anieklal@cas.iitd.ac.in" target="_blank">Anieklal@cas.iitd.ac.in</a>><br>
To: <a href="mailto:ncl-install@mailman.ucar.edu" target="_blank">ncl-install@mailman.ucar.edu</a><br>
<br>
Hi all<br>
<br>
I am trying to install ncl under conda environment. I had anaconda <br>
already installed in my system. I tried installing ncl using:<br>
"conda create -n ncl_stable -c conda-forge ncl"<br>
<br>
But while running ncl script I am getting the following error:<br>
<br>
"ncl: error while loading shared libraries: libgsl.so.25: cannot open <br>
shared object file: No such file or directory"<br>
<br>
Kindly find the following information regarding my installation:<br>
<br>
# packages in environment at /home/anaconda3/envs/ncl_stable:<br>
#<br>
# Name Version Build Channel<br>
_libgcc_mutex 0.1 conda_forge conda-forge<br>
_openmp_mutex 4.5 2_gnu conda-forge<br>
blosc 1.21.1 h83bc5f7_3 conda-forge<br>
boost-cpp 1.74.0 h75c5d50_8 conda-forge<br>
bzip2 1.0.8 h7f98852_4 conda-forge<br>
c-ares 1.18.1 h7f98852_0 conda-forge<br>
ca-certificates 2022.07.19 h06a4308_0<br>
cairo 1.16.0 ha61ee94_1012 conda-forge<br>
cfitsio 4.1.0 hd9d235c_0 conda-forge<br>
curl 7.84.0 h5eee18b_0<br>
esmf 8.2.0 nompi_h1ee4d8d_2 <br>
conda-forge<br>
expat 2.4.8 h27087fc_0 conda-forge<br>
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge<br>
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge<br>
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge<br>
font-ttf-ubuntu 0.83 hab24e00_0 conda-forge<br>
fontconfig 2.14.0 h8e229c2_0 conda-forge<br>
fonts-conda-ecosystem 1 0 conda-forge<br>
fonts-conda-forge 1 0 conda-forge<br>
freeglut 3.2.2 h9c3ff4c_1 conda-forge<br>
freetype 2.11.0 h70c0345_0<br>
freexl 1.0.6 h7f98852_0 conda-forge<br>
geos 3.11.0 h27087fc_0 conda-forge<br>
geotiff 1.7.1 h4fc65e6_3 conda-forge<br>
gettext 0.21.0 hf68c758_0<br>
giflib 5.2.1 h36c2ea0_2 conda-forge<br>
gsl 2.7.1 h6e86dc7_1<br>
hdf4 4.2.15 h9772cbc_4 conda-forge<br>
hdf5 1.12.2 nompi_h2386368_100 <br>
conda-forge<br>
hdfeos2 2.20 hca1e490_1001 conda-forge<br>
hdfeos5 5.1.16 hc2f950b_10 conda-forge<br>
icu 70.1 h27087fc_0 conda-forge<br>
jasper 2.0.33 ha77e612_0 conda-forge<br>
jpeg 9e h166bdaf_2 conda-forge<br>
json-c 0.16 hc379101_0 conda-forge<br>
kealib 1.4.15 ha7026e8_1 conda-forge<br>
keyutils 1.6.1 h166bdaf_0 conda-forge<br>
krb5 1.19.3 h3790be6_0 conda-forge<br>
lcms2 2.12 hddcbb42_0 conda-forge<br>
lerc 4.0.0 h27087fc_0 conda-forge<br>
libblas 3.9.0 16_linux64_openblas <br>
conda-forge<br>
libcblas 3.9.0 16_linux64_openblas <br>
conda-forge<br>
libcurl 7.84.0 h91b91d3_0<br>
libdap4 3.20.6 hd7c4107_2 conda-forge<br>
libdeflate 1.13 h166bdaf_0 conda-forge<br>
libedit 3.1.20210910 h7f8727e_0<br>
libev 4.33 h516909a_1 conda-forge<br>
libffi 3.4.2 h7f98852_5 conda-forge<br>
libgcc-ng 12.1.0 h8d9b700_16 conda-forge<br>
libgdal 3.5.1 h53011df_2 conda-forge<br>
libgfortran-ng 12.1.0 h69a702a_16 conda-forge<br>
libgfortran5 12.1.0 hdcd56e2_16 conda-forge<br>
libglib 2.72.1 h2d90d5f_0 conda-forge<br>
libglu 9.0.0 he1b5a44_1001 conda-forge<br>
libgomp 12.1.0 h8d9b700_16 conda-forge<br>
libiconv 1.16 h516909a_0 conda-forge<br>
libkml 1.3.0 h238a007_1014 conda-forge<br>
libnetcdf 4.8.1 nompi_h21705cb_104 <br>
conda-forge<br>
libnghttp2 1.47.0 h727a467_0 conda-forge<br>
libnsl 2.0.0 h7f98852_0 conda-forge<br>
libopenblas 0.3.21 pthreads_h78a6416_0 <br>
conda-forge<br>
libpng 1.6.37 h753d276_4 conda-forge<br>
libpq 14.5 hd77ab85_0 conda-forge<br>
librttopo 1.1.0 hf730bdb_11 conda-forge<br>
libspatialite 5.0.1 h38b5f51_18 conda-forge<br>
libsqlite 3.39.2 h753d276_1 conda-forge<br>
libssh2 1.10.0 haa6b8db_3 conda-forge<br>
libstdcxx-ng 12.1.0 ha89aaad_16 conda-forge<br>
libtiff 4.4.0 h0e0dad5_3 conda-forge<br>
libuuid 2.32.1 h7f98852_1000 conda-forge<br>
libwebp-base 1.2.4 h166bdaf_0 conda-forge<br>
libxcb 1.13 h7f98852_1004 conda-forge<br>
libxml2 2.9.14 h22db469_4 conda-forge<br>
libzip 1.9.2 hc869a4a_1 conda-forge<br>
libzlib 1.2.12 h166bdaf_2 conda-forge<br>
lz4-c 1.9.3 h9c3ff4c_1 conda-forge<br>
ncl 6.6.2 hfc90af8_40 conda-forge<br>
ncurses 6.3 h27087fc_1 conda-forge<br>
netcdf-fortran 4.6.0 nompi_hc402ea5_100 <br>
conda-forge<br>
nspr 4.33 h295c915_0<br>
nss 3.78 h2350873_0 conda-forge<br>
openjpeg 2.4.0 hb52868f_1 conda-forge<br>
openssl 1.1.1q h166bdaf_0 conda-forge<br>
pcre 8.45 h9c3ff4c_0 conda-forge<br>
pixman 0.40.0 h36c2ea0_0 conda-forge<br>
poppler 22.04.0 h1434ded_1 conda-forge<br>
poppler-data 0.4.11 hd8ed1ab_0 conda-forge<br>
postgresql 14.5 hfdbbde3_0 conda-forge<br>
proj 9.0.1 h93bde94_1 conda-forge<br>
pthread-stubs 0.4 h36c2ea0_1001 conda-forge<br>
readline 8.1.2 h0f457ee_0 conda-forge<br>
snappy 1.1.9 hbd366e4_1 conda-forge<br>
sqlite 3.39.2 h4ff8645_1 conda-forge<br>
tiledb 2.9.5 h1e4a385_0 conda-forge<br>
tzcode 2022b h166bdaf_0 conda-forge<br>
tzdata 2022b h191b570_0 conda-forge<br>
udunits2 2.2.28 hc3e0081_0 conda-forge<br>
xerces-c 3.2.3 h55805fa_5 conda-forge<br>
xorg-fixesproto 5.0 h7f98852_1002 conda-forge<br>
xorg-imake 1.0.7 0 conda-forge<br>
xorg-inputproto 2.3.2 h7f98852_1002 conda-forge<br>
xorg-kbproto 1.0.7 h7f98852_1002 conda-forge<br>
xorg-libice 1.0.10 h7f98852_0 conda-forge<br>
xorg-libsm 1.2.3 hd9c2040_1000 conda-forge<br>
xorg-libx11 1.7.2 h7f98852_0 conda-forge<br>
xorg-libxau 1.0.9 h7f98852_0 conda-forge<br>
xorg-libxaw 1.0.14 h7f98852_1 conda-forge<br>
xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge<br>
xorg-libxext 1.3.4 h7f98852_1 conda-forge<br>
xorg-libxfixes 5.0.3 h7f98852_1004 conda-forge<br>
xorg-libxi 1.7.10 h7f98852_0 conda-forge<br>
xorg-libxmu 1.1.3 h7f98852_0 conda-forge<br>
xorg-libxpm 3.5.13 h7f98852_0 conda-forge<br>
xorg-libxrender 0.9.10 h7f98852_1003 conda-forge<br>
xorg-libxt 1.2.1 h7f98852_2 conda-forge<br>
xorg-makedepend 1.0.6 h27087fc_2 conda-forge<br>
xorg-renderproto 0.11.1 h7f98852_1002 conda-forge<br>
xorg-xextproto 7.3.0 h7f98852_1002 conda-forge<br>
xorg-xproto 7.0.31 h7f98852_1007 conda-forge<br>
xz 5.2.6 h166bdaf_0 conda-forge<br>
zlib 1.2.12 h166bdaf_2 conda-forge<br>
zstd 1.5.2 h8a70e8d_4 conda-forge<br>
<br>
## conda --version<br>
conda 4.13.0<br>
<br>
## which ncl<br>
/home/anaconda3/envs/ncl_stable/bin/ncl<br>
<br>
## ncl -V<br>
ncl: error while loading shared libraries: libgsl.so.25: cannot open <br>
shared object file: No such file or directory<br>
<br>
## env | grep NCARG<br>
NCARG_ROOT=/home/anaconda3/envs/ncl_stable<br>
<br>
****************************************************************<br>
<br>
I have tried the following:<br>
<br>
1. Tried installing GSL using conda "conda install -c conda-forge gsl " <br>
. But it didn't work, showing the same error.<br>
<br>
2. Uninstalled, then reinstalled NCL using conda. Didn't work.<br>
<br>
3. Tried using miniconda instead of anaconda... It also didn't work. <br>
Same error persists.<br>
<br>
NOTE: I was using ncl smoothly in the same system under conda <br>
environment earlier. This problem started after a re installation of <br>
conda.<br>
<br>
Kindly help me with this issue since I am struggling with this for some <br>
time now.<br>
<br>
Looking forward to any kind of help and advice.<br>
<br>
Thank you<br>
Anie<br>
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</blockquote></div>