<div dir="ltr">I'd like to add that I used miniconda for installing NCL 6.6.2.<div>I'm wondering if the problem will be fixed if I were to try to download and install the pre-compiled version of the code.</div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Fri, Aug 21, 2020 at 5:41 PM Manisha Ganeshan <<a href="mailto:manisha.ganeshan86@gmail.com">manisha.ganeshan86@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr">Would it be a good idea to try and re-install NCL perhaps? </div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Fri, Aug 21, 2020 at 4:44 PM Manisha Ganeshan <<a href="mailto:manisha.ganeshan86@gmail.com" target="_blank">manisha.ganeshan86@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr">It is failing when I type addfile(), and when I type ncl_dump, with "segmentation fault".</div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Fri, Aug 21, 2020 at 4:43 PM Manisha Ganeshan <<a href="mailto:manisha.ganeshan86@gmail.com" target="_blank">manisha.ganeshan86@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr">I'm confirming that I'm in fact using version 6.6.2 (I've checked ncl -v). <div>It's odd that I'm able to read the file in another linux system which is very similar to the one I'm using. Both systems have NCL version 6.6.2.</div><div>Unfortunately, all the data are in the first linux system, and so I'm trying to find an efficient way to solve this problem.</div><div><br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Fri, Aug 21, 2020 at 4:39 PM Rick Brownrigg <<a href="mailto:brownrig@ucar.edu" target="_blank">brownrig@ucar.edu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr"><div>Well I don't think the size (1.5GB) is an issue. Again, are you using an older version?</div><div><br></div><div> ncl -v</div><div><br></div><div>Is it failing when you do a simple addfile()? Or when you actually access a particular variable?<br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Fri, Aug 21, 2020 at 1:17 PM Manisha Ganeshan <<a href="mailto:manisha.ganeshan86@gmail.com" target="_blank">manisha.ganeshan86@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr">Is there any other reason it could be failing due to segmentation fault?</div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Fri, Aug 21, 2020 at 2:57 PM Manisha Ganeshan <<a href="mailto:manisha.ganeshan86@gmail.com" target="_blank">manisha.ganeshan86@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr">Hi Rick,<div><br></div><div>I'm using the same version (6.6.2). I installed using conda, and so far it has worked okay. I've read .he5 files using the same version.</div><div><br></div><div>Nisha</div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Fri, Aug 21, 2020 at 1:54 PM Rick Brownrigg <<a href="mailto:brownrig@ucar.edu" target="_blank">brownrig@ucar.edu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr"><div>Hi Nisha,</div><div><br></div><div>I was able to read that file just fine with ncl_filedump. This is on a mac using the latest version, ncl v6.6.2</div><div><br></div><div>Are you using an older version of NCL? More recent versions have better and more complete support for HDF5.</div><div><br></div><div>Hope that helps...</div><div>Rick</div><div><br></div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Fri, Aug 21, 2020 at 11:25 AM Manisha Ganeshan via ncl-talk <<a href="mailto:ncl-talk@mailman.ucar.edu" target="_blank">ncl-talk@mailman.ucar.edu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div dir="ltr"><div class="gmail_chip gmail_drive_chip" style="width:396px;height:18px;max-height:18px;background-color:rgb(245,245,245);padding:5px;font-family:arial;font-weight:bold;font-size:13px;border:1px solid rgb(221,221,221);line-height:1"><a href="https://drive.google.com/file/d/1RICsYg5nwZTcVeCGJmdkvED445pQaTp6/view?usp=drive_web" style="display:inline-block;max-width:366px;overflow:hidden;text-overflow:ellipsis;white-space:nowrap;text-decoration-line:none;padding:1px 0px;border:medium none" target="_blank"><img style="vertical-align: bottom; border: medium none;" src="https://ssl.gstatic.com/docs/doclist/images/icon_10_generic_list.png"> <span dir="ltr" style="vertical-align:bottom;text-decoration:none">ATL09_20181016052938_02690101_002_01.h5</span></a><img style="opacity: 0.55; float: right; display: none;"></div>Hello,<div><br></div><div>I'm trying to read the attached hdf5 file but I get a segmentation fault. Is it because of the size which is roughly 1.5 gb?</div><div>Even when I try ncl_filedump, I get the same error message.</div><div>I'd appreciate any help or suggestions.</div><div><br></div><div>Thanks,</div><div>Nisha</div><div><br clear="all"><div><br></div>-- <br><div dir="ltr"><div dir="ltr">Dr. Manisha Ganeshan<div>Universities Space Research Association</div><div>Maryland, U.S.A.</div></div></div></div></div>
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</blockquote></div><br clear="all"><div><br></div>-- <br><div dir="ltr"><div dir="ltr">Dr. Manisha Ganeshan<div>Universities Space Research Association</div><div>Maryland, U.S.A.</div></div></div>
</blockquote></div><br clear="all"><div><br></div>-- <br><div dir="ltr"><div dir="ltr">Dr. Manisha Ganeshan<div>Universities Space Research Association</div><div>Maryland, U.S.A.</div></div></div>
</blockquote></div>
</blockquote></div><br clear="all"><div><br></div>-- <br><div dir="ltr"><div dir="ltr">Dr. Manisha Ganeshan<div>Universities Space Research Association</div><div>Maryland, U.S.A.</div></div></div>
</blockquote></div><br clear="all"><div><br></div>-- <br><div dir="ltr"><div dir="ltr">Dr. Manisha Ganeshan<div>Universities Space Research Association</div><div>Maryland, U.S.A.</div></div></div>
</blockquote></div><br clear="all"><div><br></div>-- <br><div dir="ltr"><div dir="ltr">Dr. Manisha Ganeshan<div>Universities Space Research Association</div><div>Maryland, U.S.A.</div></div></div>
</blockquote></div><br clear="all"><div><br></div>-- <br><div dir="ltr" class="gmail_signature"><div dir="ltr">Dr. Manisha Ganeshan<div>Universities Space Research Association</div><div>Maryland, U.S.A.</div></div></div>