[ncl-talk] Reading in a variable from multiple grib2 files

Nkese Mc Shine Nkese.McShine at sta.uwi.edu
Thu May 27 13:51:31 MDT 2021


Good day everyone,

Thank you. That suggestion helped.

Regards,
NM.
________________________________
From: Dennis Shea [shea at ucar.edu]
Sent: 21 May 2021 12:31
To: Nkese Mc Shine
Cc: ncl-talk at ucar.edu
Subject: Re: [ncl-talk] Reading in a variable from multiple grib2 files

UGRD_P0_L103_GGA0 ( initial_time0_hours, forecast_time0, lat_0, lon_0 )

with initial_time0_hours = 120
forecast_time0 = 6
lat_0 = 94
lon_0 = 192

I assume the 120 is from 4x/day * 30 days. So, possibly, for one file you would have dimensions


[ncl_join | 1] x [initial_time0_hours | 120] x [forecast_time0 ! 6] x [lat_0 |94] x [lon_0 | 192]


However, if the next file has 31 days [4*31=124
    [initial_time0_hours | 124] x [forecast_time0 ! 6] x [lat_0 |94] x [lon_0 | 192]


NCL allows concatenation along the leftmost dimension [record dimension] but not the other dimensions.

===

Remove the
      ListSetType (fad,"join")


This will create time series at each grid point.








On Thu, May 20, 2021 at 9:55 PM Nkese Mc Shine via ncl-talk <ncl-talk at mailman.ucar.edu<mailto:ncl-talk at mailman.ucar.edu>> wrote:
Good day everyone,

I would like to read in the daily u and v components from multiple grib2 files format. However, it seems that months that are not 31 days are skipped and the daily data for the variables can not be read out. Can anyone give any suggestions that can help. Below is the script I used and the error it produced.

Code:

load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_code.ncl"
load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/gsn_csm.ncl"
load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/contributed.ncl"
load "$NCARG_ROOT/lib/ncarg/nclscripts/csm/shea_util.ncl"


;-----------------------------------------------------
;MAIN SCRIPT
;------------------------------------------------------
begin


; directories and files

   diri  = "/run/media/wrfuser/Seagate\ Backup\ Plus\ Drive/CFSR_wind_data/" ;
   fils = systemfunc("ls " + diri + "wnd10m*")
 ;  print(fils) ; full path to files

   fad     = addfiles (fils,"r")
  ListSetType (fad,"join")

    uwnd    = fad[:]->UGRD_P0_L103_GGA0
    vwnd    = fad[:]->VGRD_P0_L103_GGA0
   printVarSummary (uwnd)
   printVarSummary (vwnd)


 end

Error:

Copyright (C) 1995-2019 - All Rights Reserved
 University Corporation for Atmospheric Research
 NCAR Command Language Version 6.6.2
 The use of this software is governed by a License Agreement.
 See http://www.ncl.ucar.edu/ for more details.
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.201011.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.201009.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.201006.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.201004.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.201002.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.200911.grb2 dimension sizes do not conform to others in list; skipping file
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warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.200904.grb2 dimension sizes do not conform to others in list; skipping file
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warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198511.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198509.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198506.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198504.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198502.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198411.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198409.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198406.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198404.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198402.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198311.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198309.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198306.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198304.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198302.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198211.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198209.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198206.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198204.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198202.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198111.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198109.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198106.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198104.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198102.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198011.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198009.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198006.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198004.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198002.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.197911.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.197909.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.197906.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.197904.grb2 dimension sizes do not conform to others in list; skipping file
warning:File /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.197902.grb2 dimension sizes do not conform to others in list; skipping file
warning:A valid instance of variable UGRD_P0_L103_GGA0 was not found in one or more elements of the file list

ncl_filedump of the one of the files:

Copyright (C) 1995-2019 - All Rights Reserved
 University Corporation for Atmospheric Research
 NCAR Command Language Version 6.6.2
 The use of this software is governed by a License Agreement.
 See http://www.ncl.ucar.edu/ for more details.

Variable: f
Type: file
filename:       wnd10m.l.gdas.198011
path:   /run/media/wrfuser/Seagate Backup Plus Drive/CFSR_wind_data/wnd10m.l.gdas.198011.grb2
   file global attributes:
   dimensions:
      initial_time0_hours = 120
      forecast_time0 = 6
      lat_0 = 94
      lon_0 = 192
   variables:
      float UGRD_P0_L103_GGA0 ( initial_time0_hours, forecast_time0, lat_0, lon_0 )
         center :       US National Weather Service - NCEP (WMC)
         production_status :    Operational products
         long_name :    U-component of wind
         units :        m s-1
         _FillValue :   1e+20
         grid_type :    Gaussian latitude/longitude
         parameter_discipline_and_category :    Meteorological products, Momentum
         parameter_template_discipline_category_number :        ( 0, 0, 2, 2 )
         level_type :   Specified height level above ground (m)
         level :        10

      float VGRD_P0_L103_GGA0 ( initial_time0_hours, forecast_time0, lat_0, lon_0 )
         center :       US National Weather Service - NCEP (WMC)
         production_status :    Operational products
         long_name :    V-component of wind
         units :        m s-1
         _FillValue :   1e+20
         grid_type :    Gaussian latitude/longitude
         parameter_discipline_and_category :    Meteorological products, Momentum
         parameter_template_discipline_category_number :        ( 0, 0, 2, 3 )
         level_type :   Specified height level above ground (m)
         level :        10

      double initial_time0_hours ( initial_time0_hours )
         long_name :    initial time
         units :        hours since 1800-01-01 00:00

      double initial_time0_encoded ( initial_time0_hours )
         long_name :    initial time encoded as double
         units :        yyyymmddhh.hh_frac

      float lat_0 ( lat_0 )
         long_name :    latitude
         grid_type :    Gaussian Latitude/Longitude
         units :        degrees_north
         N :    47
         Di :   1.875
         Lo2 :  358.125
         La2 :  -88.542
         Lo1 :   0
         La1 :  88.542

      float lon_0 ( lon_0 )
         long_name :    longitude
         grid_type :    Gaussian Latitude/Longitude
         units :        degrees_east
         N :    47
         Di :   1.875
         Lo2 :  358.125
         La2 :  -88.542
         Lo1 :   0
         La1 :  88.542

      integer forecast_time0 ( forecast_time0 )
         long_name :    Forecast offset from initial time
         units :        hours

      string initial_time0 ( initial_time0_hours )
         long_name :    Initial time of first record
         units :        mm/dd/yyyy (hh:mm)

Any assistance would be greatly appreciated.

Regards,
NM

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