[ncl-install] ncl-install Digest, Vol 146, Issue 2

Andrei Kurbatov akurbatov at maine.edu
Wed Dec 11 04:47:33 MST 2019


Hi Carline,
Please read this post
http://mailman.ucar.edu/pipermail/ncl-install/2019-November/002861.html

On Tue, Dec 10, 2019 at 10:08 PM <ncl-install-request at ucar.edu> wrote:

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> Today's Topics:
>
>    1. Install issues (Caroline Yvette Peeters)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Wed, 11 Dec 2019 03:08:16 +0000
> From: Caroline Yvette Peeters <cpeeters at purdue.edu>
> To: "ncl-install at ucar.edu" <ncl-install at ucar.edu>
> Subject: [ncl-install] Install issues
> Message-ID:
>         <
> DM5PR2201MB172391EE19BDB392B667AC56A05A0 at DM5PR2201MB1723.namprd22.prod.outlook.com
> >
>
> Content-Type: text/plain; charset="iso-8859-1"
>
> Hello,
> I'm trying to install and use NCL after having installed conda. I've been
> following the steps from the website. I tried to do the test/sample plot
> but I received an error message after typing "ncl -V"
>
>
> dyld: Library not loaded: /opt/X11/lib/libcairo.2.dylib
>
>   Referenced from:
> /Users/carolinepeeters/opt/anaconda3/envs/ncl_stable/bin/ncl
>
>   Reason: image not found
>
> Trace/BPT trap: 5
>
>
> I also tried:  conda update -n ncl_stable -c conda-forge --all
>
>
>
>
>
> (ncl_stable) pal-nat186-84-79:~ carolinepeeters$ conda list -n ncl_stable
>
> conda --version
>
> # packages in environment at
> /Users/carolinepeeters/opt/anaconda3/envs/ncl_stable:
>
> #
>
> # Name                    Version                   Build  Channel
>
> boost-cpp                 1.70.0               h75728bb_2    conda-forge
>
> bzip2                     1.0.8                h0b31af3_2    conda-forge
>
> ca-certificates           2019.11.28           hecc5488_0    conda-forge
>
> cairo                     1.16.0            he1c11cd_1002    conda-forge
>
> cfitsio                   3.470                h84d2f63_2    conda-forge
>
> curl                      7.65.3               h22ea746_0    conda-forge
>
> esmf                      8.0.0           nompi_h82cb086_2    conda-forge
>
> expat                     2.2.5             h4a8c4bd_1004    conda-forge
>
> fontconfig                2.13.1            h6b1039f_1001    conda-forge
>
> freetype                  2.10.0               h24853df_1    conda-forge
>
> freexl                    1.0.5             h1de35cc_1002    conda-forge
>
> geos                      3.8.0                h4a8c4bd_0    conda-forge
>
> geotiff                   1.5.1                ha113b03_7    conda-forge
>
> gettext                   0.19.8.1          h46ab8bc_1002    conda-forge
>
> giflib                    5.1.7                h01d97ff_1    conda-forge
>
> glib                      2.58.3            h9d45998_1002    conda-forge
>
> gsl                       2.5                  ha2d443c_1    conda-forge
>
> hdf4                      4.2.13            h84186c3_1003    conda-forge
>
> hdf5                      1.10.5          nompi_h3e39495_1104
> conda-forge
>
> hdfeos2                   2.20              h207910d_1000    conda-forge
>
> hdfeos5                   5.1.16               h60f75e3_5    conda-forge
>
> icu                       64.2                 h6de7cb9_1    conda-forge
>
> jasper                    1.900.1           h636a363_1006    conda-forge
>
> jpeg                      9c                h1de35cc_1001    conda-forge
>
> json-c                    0.13.1            h1de35cc_1001    conda-forge
>
> kealib                    1.4.10            h6659575_1005    conda-forge
>
> krb5                      1.16.3            hcfa6398_1001    conda-forge
>
> libblas                   3.8.0               14_openblas    conda-forge
>
> libcblas                  3.8.0               14_openblas    conda-forge
>
> libcurl                   7.65.3               h16faf7d_0    conda-forge
>
> libcxx                    9.0.0                h89e68fa_1    conda-forge
>
> libdap4                   3.20.4               habf5908_0    conda-forge
>
> libedit                   3.1.20170329      hcfe32e1_1001    conda-forge
>
> libffi                    3.2.1             h6de7cb9_1006    conda-forge
>
> libgdal                   3.0.2                h1b9961b_5    conda-forge
>
> libgfortran               4.0.0                         2    conda-forge
>
> libiconv                  1.15              h01d97ff_1005    conda-forge
>
> libkml                    1.3.0             hed7d534_1010    conda-forge
>
> libnetcdf                 4.7.1           nompi_hec86efb_102    conda-forge
>
> libopenblas               0.3.7                h3d69b6c_5    conda-forge
>
> libpng                    1.6.37               h2573ce8_0    conda-forge
>
> libpq                     11.5                 h31a01ba_2    conda-forge
>
> libspatialite             4.3.0a            h9691d84_1033    conda-forge
>
> libssh2                   1.8.2                hcdc9a53_2    conda-forge
>
> libtiff                   4.1.0                ha78913b_1    conda-forge
>
> libwebp                   1.0.2                h20df551_3    conda-forge
>
> libxml2                   2.9.10               h53d96d6_0    conda-forge
>
> llvm-openmp               8.0.1                h770b8ee_0    conda-forge
>
> lz4-c                     1.8.3             h6de7cb9_1001    conda-forge
>
> ncl                       6.6.2               heac5136_13    conda-forge
>
> ncurses                   6.1               h0a44026_1002    conda-forge
>
> netcdf-fortran            4.4.5           nompi_h25f5b61_1105
> conda-forge
>
> openjpeg                  2.3.1                hcdae239_3    conda-forge
>
> openmp                    8.0.1                         0    conda-forge
>
> openssl                   1.1.1d               h0b31af3_0    conda-forge
>
> pcre                      8.43                 h4a8c4bd_0    conda-forge
>
> pixman                    0.38.0            h01d97ff_1003    conda-forge
>
> poppler                   0.67.0               h16886b5_8    conda-forge
>
> poppler-data              0.4.9                         1    conda-forge
>
> postgresql                11.5                 h26bc10f_2    conda-forge
>
> proj                      6.2.1                h773a61f_0    conda-forge
>
> readline                  8.0                  hcfe32e1_0    conda-forge
>
> sqlite                    3.30.1               h93121df_0    conda-forge
>
> tbb                       2018.0.5             h2d50403_0    conda-forge
>
> tiledb                    1.7.0                hd5e958f_2    conda-forge
>
> tk                        8.6.10               hbbe82c9_0    conda-forge
>
> tzcode                    2019a             h01d97ff_1002    conda-forge
>
> udunits2                  2.2.27.6          h776b7f1_1001    conda-forge
>
> xerces-c                  3.2.2             hbda6038_1004    conda-forge
>
> xz                        5.2.4             h1de35cc_1001    conda-forge
>
> zlib                      1.2.11            h0b31af3_1006    conda-forge
>
> zstd                      1.4.4                he7fca8b_1    conda-forge
>
> (ncl_stable) pal-nat186-84-79:~ carolinepeeters$ conda --version
>
> whconda 4.7.12
>
> (ncl_stable) pal-nat186-84-79:~ carolinepeeters$ which ncl
>
> /Users/carolinepeeters/opt/anaconda3/envs/ncl_stable/bin/ncl
>
> (ncl_stable) pal-nat186-84-79:~ carolinepeeters$ ncl -V
>
> dyld: Library not loaded: /opt/X11/lib/libcairo.2.dylib
>
>   Referenced from:
> /Users/carolinepeeters/opt/anaconda3/envs/ncl_stable/bin/ncl
>
>   Reason: image not found
>
> Trace/BPT trap: 5
>
> (ncl_stable) pal-nat186-84-79:~ carolinepeeters$ env  | grep NCARG
>
> NCARG_ROOT=/usr/local
>
> (ncl_stable) pal-nat186-84-79:~ carolinepeeters$
>
>
>
>
> Any help would be appreciated, thanks!
>
>
> -Caroline
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> End of ncl-install Digest, Vol 146, Issue 2
> *******************************************
>


-- 
Andrei Kurbatov
Climate Change Institute &
School of Earth and Climate Sciences
University of Maine
136 Sawyer Environmental Research Building
Orono, Maine 04469-5790
Tel: (207) 581-2840
Fax: (207) 581-1203
e-mail: akurbatov at maine.edu
http://www.climatechange.umaine.edu
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