[Met_help] [rt.rap.ucar.edu #90305] History for v8.1 netCDF Mode format undefined for regrid_data_plane
John Halley Gotway via RT
met_help at ucar.edu
Wed May 22 15:25:27 MDT 2019
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Initial Request
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We are getting the following error which exits regrid_data_plane for version
8.1 . The same script worked for v8.0-bugfix.
In particular, what clue may the following string give us "
_ZN6netCDF6NcFileC1ERKSsNS0_8FileModeENS0_10FileFormatE "
regrid_data_plane: symbol lookup error: regrid_data_plane: undefined symbol:
_ZN6netCDF6NcFileC1ERKSsNS0_8FileModeENS0_10FileFormatE
Where we have the following script looping on DTG dtg and m=20.
regrid_data_plane PYTHON_NUMPY G003 navgem_ens_${vrb}_${dtg}_${lead}_${mmm}.nc
\
-field 'name="./read_NRL_binary.py
'${dtg}'/mbr'${mmm}'/outp/'${vrb}'.0_0000.0_glob360x181_'${dtg}'_0'${lead}'0000_fcstfld";
level="'${plev}'";'
here is some output when we run the script
geopht_pre_0500 2016121500 120 P500
DEBUG 1: Reading data file: PYTHON_NUMPY
DEBUG 4: Met2dDataFileFactory::new_met_2d_data_file() -> created new
Met2dDataFile object of type "FileType_Python_Numpy".
DEBUG 4: VarInfoFactory::new_var_info() -> created new VarInfo object of type
"FileType_Python_Numpy".
Input File:
'2016121500/mbr001/outp/geopht_pre_0500.0_0000.0_glob360x181_2016121500_01200000_fcstfld'
Data Shape: (181, 360)
Data Type: dtype('float64')
Data Range: 4782.70849609375 to 5905.7236328125
Attributes: {'long_name': 'UNKNOWN', 'init': '20161215_000000', 'valid':
'20161220_000000', 'grid': {'delta_lat': 1.0, 'lon_ll': 0.0, 'name': 'Global 1
Degree', 'Nlat': 181, 'lat_ll': -90.0, 'delta_lon': 1.0, 'type': 'LatLon',
'Nlon': 360}, 'name': 'geopht', 'lead': '120', 'level': 'pre_0500.0', 'units':
'UNKNOWN', 'accum': '00'}
END READ NRL BINARY
DEBUG 2: Input grid: Projection: Lat/Lon Nx: 360 Ny: 181 lat_ll: -90.000
lon_ll: -0.000 delta_lat: 1.000 delta_lon: 1.000
DEBUG 3: Use the grid named "G003".
DEBUG 3: Grid Definition: Projection: Lat/Lon Nx: 360 Ny: 181 lat_ll: -90.000
lon_ll: -0.000 delta_lat: 1.000 delta_lon: 1.000
DEBUG 2: Output grid: Projection: Lat/Lon Nx: 360 Ny: 181 lat_ll: -90.000
lon_ll: -0.000 delta_lat: 1.000 delta_lon: 1.000
DEBUG 2: Interpolation options: method = NEAREST, width = 1, shape = SQUARE,
vld_thresh = 0.5
regrid_data_plane: symbol lookup error: regrid_data_plane: undefined symbol:
_ZN6netCDF6NcFileC1ERKSsNS0_8FileModeENS0_10FileFormatE
Thanks,
Glen
--
Mr. Glen CARL
NRL Monterey Contractor SAIC/0cog, Bldg 704 Rm 133, Code 7532
831.325.6269
glen.carl.ctr at nrlmry.navy.mil
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Complete Ticket History
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Subject: v8.1 netCDF Mode format undefined for regrid_data_plane
From: Carl, Mr. Glen, Contractor, Code 7532
Time: Tue May 21 17:11:51 2019
We discovered we have an error with an install on the machine that was
generating the error. The guess was NetCDF was not installed
correctly.
You can close the issue.
Thanks,
Glen
-----Original Message-----
From: met_help at ucar.edu via RT [mailto:met_help at ucar.edu]
Sent: Tuesday, May 21, 2019 2:41 PM
To: Carl, Mr. Glen, Contractor, Code 7532
Subject: [rt.rap.ucar.edu #90305] AutoReply: v8.1 netCDF Mode format
undefined
for regrid_data_plane
Greetings,
This message has been automatically generated in response to the
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trouble ticket regarding:
"v8.1 netCDF Mode format undefined for regrid_data_plane",
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Thank you,
met_help at ucar.edu
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We are getting the following error which exits regrid_data_plane for
version
8.1 . The same script worked for v8.0-bugfix.
In particular, what clue may the following string give us "
_ZN6netCDF6NcFileC1ERKSsNS0_8FileModeENS0_10FileFormatE "
regrid_data_plane: symbol lookup error: regrid_data_plane: undefined
symbol:
_ZN6netCDF6NcFileC1ERKSsNS0_8FileModeENS0_10FileFormatE
Where we have the following script looping on DTG dtg and m=20.
regrid_data_plane PYTHON_NUMPY G003
navgem_ens_${vrb}_${dtg}_${lead}_${mmm}.nc
\
-field 'name="./read_NRL_binary.py
'${dtg}'/mbr'${mmm}'/outp/'${vrb}'.0_0000.0_glob360x181_'${dtg}'_0'${lead}'0000_fcstfld";
level="'${plev}'";'
here is some output when we run the script
geopht_pre_0500 2016121500 120 P500
DEBUG 1: Reading data file: PYTHON_NUMPY
DEBUG 4: Met2dDataFileFactory::new_met_2d_data_file() -> created new
Met2dDataFile object of type "FileType_Python_Numpy".
DEBUG 4: VarInfoFactory::new_var_info() -> created new VarInfo object
of type
"FileType_Python_Numpy".
Input File:
'2016121500/mbr001/outp/geopht_pre_0500.0_0000.0_glob360x181_2016121500_01200000_fcstfld'
Data Shape: (181, 360)
Data Type: dtype('float64')
Data Range: 4782.70849609375 to 5905.7236328125
Attributes: {'long_name': 'UNKNOWN', 'init': '20161215_000000',
'valid':
'20161220_000000', 'grid': {'delta_lat': 1.0, 'lon_ll': 0.0, 'name':
'Global 1
Degree', 'Nlat': 181, 'lat_ll': -90.0, 'delta_lon': 1.0, 'type':
'LatLon',
'Nlon': 360}, 'name': 'geopht', 'lead': '120', 'level': 'pre_0500.0',
'units':
'UNKNOWN', 'accum': '00'}
END READ NRL BINARY
DEBUG 2: Input grid: Projection: Lat/Lon Nx: 360 Ny: 181 lat_ll:
-90.000
lon_ll: -0.000 delta_lat: 1.000 delta_lon: 1.000
DEBUG 3: Use the grid named "G003".
DEBUG 3: Grid Definition: Projection: Lat/Lon Nx: 360 Ny: 181 lat_ll:
-90.000
lon_ll: -0.000 delta_lat: 1.000 delta_lon: 1.000
DEBUG 2: Output grid: Projection: Lat/Lon Nx: 360 Ny: 181 lat_ll:
-90.000
lon_ll: -0.000 delta_lat: 1.000 delta_lon: 1.000
DEBUG 2: Interpolation options: method = NEAREST, width = 1, shape =
SQUARE,
vld_thresh = 0.5
regrid_data_plane: symbol lookup error: regrid_data_plane: undefined
symbol:
_ZN6netCDF6NcFileC1ERKSsNS0_8FileModeENS0_10FileFormatE
Thanks,
Glen
--
Mr. Glen CARL
NRL Monterey Contractor SAIC/0cog, Bldg 704 Rm 133, Code 7532
831.325.6269
glen.carl.ctr at nrlmry.navy.mil
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