[Met_help] [rt.rap.ucar.edu #83857] History for MODE-MET

John Halley Gotway via RT met_help at ucar.edu
Tue Jul 9 12:03:55 MDT 2019


----------------------------------------------------------------
  Initial Request
----------------------------------------------------------------

Hi, I’m working with the MET implementation of MODE. I use as the forecast
the regional WRF from Argentina (grib files) and as the observation, the
satellite images from IMERG (HDF5 files).

Can Met read HDF5 files? I know the LIDAR2NC tool works with Calipso HDF
data file but it is different to satellite images HDF5 data files and this
tool doesn´t work with my observations. So I converted this HDF5 files
(Imerg data) to NETCDF files with NCO but something it´s wrong because when
I use the Regrid data Plane Tool (to regrid de IMERG netcdf file to the
regional WRF grid) and when I use MODE, I have this:

*[naranda at rayo MET]$ bin/mode
data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S000000-E002959.0000.V05B.nc
<http://3B-HHR.MS.MRG.3IMERG.20170707-S000000-E002959.0000.V05B.nc>
MET/data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S003000-E005959.0030.V05B.nc
<http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-E005959.0030.V05B.nc>
tutorial/config/MODEConfig_tutorialnc -outdir tutorial/out/mode1 -v 2*

*DEBUG 1: Default Config File:
/share/apps/Build_MET_Intel/MET/share/met/config/MODEConfig_default*

*DEBUG 1: Match Config File: tutorial/config/MODEConfig_tutorialnc*

*DEBUG 1: Merge Config File: tutorial/config/MODEConfig_tutorialnc*

*ERROR  : *

*ERROR  : Trouble reading forecast file
"data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S000000-E002959.0000.V05B.nc
<http://3B-HHR.MS.MRG.3IMERG.20170707-S000000-E002959.0000.V05B.nc>"*

*ERROR  :*

*%%%%%%%%%%%%%%%%%%*

*[naranda at rayo MET]$ bin/regrid_data_plane
data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S003000-E005959.0030.V05B.nc
<http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-E005959.0030.V05B.nc>
data/wrf_pp/prueba1 tutorial/out/regrid_data_plane/pepe.nc <http://pepe.nc>
-field 'name="Calp"; level="(*,*)";' -method BILIN -width 2*

*DEBUG 1: Reading data file:
data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S003000-E005959.0030.V05B.nc
<http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-E005959.0030.V05B.nc>*

*ERROR  : *

*ERROR  : process_data_file() ->
"data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S003000-E005959.0030.V05B.nc
<http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-E005959.0030.V05B.nc>" not a
valid data file*

*ERROR  *



I don´t know where is my mistake...

Thanks,


Natalí Aranda.


----------------------------------------------------------------
  Complete Ticket History
----------------------------------------------------------------

Subject: MODE-MET
From: John Halley Gotway
Time: Tue Jan 30 13:31:16 2018

Hi Natali,

I see that you're trying to use IMERG data as input MET.  Can you
please
post a sample file to our anonymous ftp site following the
instructions
listed below?
   https://dtcenter.org/met/users/support/met_help.php#ftp

Once I hear back from you that you've posted the data, I'll go grab it
and
take a closer look.

Thanks,
John Halley Gotway
met_help at ucar.edu


On Tue, Jan 30, 2018 at 11:21 AM, natali aranda via RT
<met_help at ucar.edu>
wrote:

>
> Tue Jan 30 11:21:03 2018: Request 83857 was acted upon.
> Transaction: Ticket created by natali.g.aranda at gmail.com
>        Queue: met_help
>      Subject: MODE-MET
>        Owner: Nobody
>   Requestors: natali.g.aranda at gmail.com
>       Status: new
>  Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83857 >
>
>
> Hi, I’m working with the MET implementation of MODE. I use as the
forecast
> the regional WRF from Argentina (grib files) and as the observation,
the
> satellite images from IMERG (HDF5 files).
>
> Can Met read HDF5 files? I know the LIDAR2NC tool works with Calipso
HDF
> data file but it is different to satellite images HDF5 data files
and this
> tool doesn´t work with my observations. So I converted this HDF5
files
> (Imerg data) to NETCDF files with NCO but something it´s wrong
because when
> I use the Regrid data Plane Tool (to regrid de IMERG netcdf file to
the
> regional WRF grid) and when I use MODE, I have this:
>
> *[naranda at rayo MET]$ bin/mode
> data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S000000-
> E002959.0000.V05B.nc
> <http://3B-HHR.MS.MRG.3IMERG.20170707-S000000-E002959.0000.V05B.nc>
> MET/data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-
> S003000-E005959.0030.V05B.nc
> <http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-E005959.0030.V05B.nc>
> tutorial/config/MODEConfig_tutorialnc -outdir tutorial/out/mode1 -v
2*
>
> *DEBUG 1: Default Config File:
> /share/apps/Build_MET_Intel/MET/share/met/config/MODEConfig_default*
>
> *DEBUG 1: Match Config File: tutorial/config/MODEConfig_tutorialnc*
>
> *DEBUG 1: Merge Config File: tutorial/config/MODEConfig_tutorialnc*
>
> *ERROR  : *
>
> *ERROR  : Trouble reading forecast file
> "data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S000000-
> E002959.0000.V05B.nc
> <http://3B-HHR.MS.MRG.3IMERG.20170707-S000000-
E002959.0000.V05B.nc>"*
>
> *ERROR  :*
>
> *%%%%%%%%%%%%%%%%%%*
>
> *[naranda at rayo MET]$ bin/regrid_data_plane
> data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S003000-
> E005959.0030.V05B.nc
> <http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-E005959.0030.V05B.nc>
> data/wrf_pp/prueba1 tutorial/out/regrid_data_plane/pepe.nc
<http://pepe.nc
> >
> -field 'name="Calp"; level="(*,*)";' -method BILIN -width 2*
>
> *DEBUG 1: Reading data file:
> data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S003000-
> E005959.0030.V05B.nc
> <http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-E005959.0030.V05B.nc>*
>
> *ERROR  : *
>
> *ERROR  : process_data_file() ->
> "data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S003000-
> E005959.0030.V05B.nc
> <http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-E005959.0030.V05B.nc>"
not a
> valid data file*
>
> *ERROR  *
>
>
>
> I don´t know where is my mistake...
>
> Thanks,
>
>
> Natalí Aranda.
>
>

------------------------------------------------
Subject: MODE-MET
From: natali aranda
Time: Wed Jan 31 07:09:19 2018

Hi John,

I posted de data following the instructions.

The file is: 3B-HHR.MS.MRG.3IMERG.20170707-S000000-
E002959.0000.V05B.HDF5

Thanks for your help!

Natalí

2018-01-30 17:31 GMT-03:00 John Halley Gotway via RT
<met_help at ucar.edu>:

> Hi Natali,
>
> I see that you're trying to use IMERG data as input MET.  Can you
please
> post a sample file to our anonymous ftp site following the
instructions
> listed below?
>    https://dtcenter.org/met/users/support/met_help.php#ftp
>
> Once I hear back from you that you've posted the data, I'll go grab
it and
> take a closer look.
>
> Thanks,
> John Halley Gotway
> met_help at ucar.edu
>
>
> On Tue, Jan 30, 2018 at 11:21 AM, natali aranda via RT
<met_help at ucar.edu>
> wrote:
>
> >
> > Tue Jan 30 11:21:03 2018: Request 83857 was acted upon.
> > Transaction: Ticket created by natali.g.aranda at gmail.com
> >        Queue: met_help
> >      Subject: MODE-MET
> >        Owner: Nobody
> >   Requestors: natali.g.aranda at gmail.com
> >       Status: new
> >  Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83857 >
> >
> >
> > Hi, I’m working with the MET implementation of MODE. I use as the
> forecast
> > the regional WRF from Argentina (grib files) and as the
observation, the
> > satellite images from IMERG (HDF5 files).
> >
> > Can Met read HDF5 files? I know the LIDAR2NC tool works with
Calipso HDF
> > data file but it is different to satellite images HDF5 data files
and
> this
> > tool doesn´t work with my observations. So I converted this HDF5
files
> > (Imerg data) to NETCDF files with NCO but something it´s wrong
because
> when
> > I use the Regrid data Plane Tool (to regrid de IMERG netcdf file
to the
> > regional WRF grid) and when I use MODE, I have this:
> >
> > *[naranda at rayo MET]$ bin/mode
> > data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S000000-
> > E002959.0000.V05B.nc
> > <http://3B-HHR.MS.MRG.3IMERG.20170707-S000000-
E002959.0000.V05B.nc>
> > MET/data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-
> > S003000-E005959.0030.V05B.nc
> > <http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-
E005959.0030.V05B.nc>
> > tutorial/config/MODEConfig_tutorialnc -outdir tutorial/out/mode1
-v 2*
> >
> > *DEBUG 1: Default Config File:
> >
/share/apps/Build_MET_Intel/MET/share/met/config/MODEConfig_default*
> >
> > *DEBUG 1: Match Config File:
tutorial/config/MODEConfig_tutorialnc*
> >
> > *DEBUG 1: Merge Config File:
tutorial/config/MODEConfig_tutorialnc*
> >
> > *ERROR  : *
> >
> > *ERROR  : Trouble reading forecast file
> > "data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S000000-
> > E002959.0000.V05B.nc
> > <http://3B-HHR.MS.MRG.3IMERG.20170707-S000000-
E002959.0000.V05B.nc>"*
> >
> > *ERROR  :*
> >
> > *%%%%%%%%%%%%%%%%%%*
> >
> > *[naranda at rayo MET]$ bin/regrid_data_plane
> > data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S003000-
> > E005959.0030.V05B.nc
> > <http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-
E005959.0030.V05B.nc>
> > data/wrf_pp/prueba1 tutorial/out/regrid_data_plane/pepe.nc <
> http://pepe.nc
> > >
> > -field 'name="Calp"; level="(*,*)";' -method BILIN -width 2*
> >
> > *DEBUG 1: Reading data file:
> > data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S003000-
> > E005959.0030.V05B.nc
> > <http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-
E005959.0030.V05B.nc>*
> >
> > *ERROR  : *
> >
> > *ERROR  : process_data_file() ->
> > "data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S003000-
> > E005959.0030.V05B.nc
> > <http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-
E005959.0030.V05B.nc>"
> not a
> > valid data file*
> >
> > *ERROR  *
> >
> >
> >
> > I don´t know where is my mistake...
> >
> > Thanks,
> >
> >
> > Natalí Aranda.
> >
> >
>
>

------------------------------------------------
Subject: MODE-MET
From: John Halley Gotway
Time: Fri Feb 09 23:03:01 2018

Natali,

Sorry for the delay.  I did grab the imerg file and took a look.  I
see
it’s in HDF5 and MET is unable to read it.  I’d been hoping to play
around
with it a bit to see if I could offer any useful suggestions, but
wasn’t
able to.

Unfortunately, file formats are often a big headache.  Ideally we’d be
able
to enhance MET to read it but don’t have time/funding to do so right
now.

I did see your other ticket about MET placing your output on the wrong
spot
on the earth.  I suspect there’s some issue in how MET is parsing the
grid
info.

Thanks for sending the sample data file.  We’ll let you know what we
find.

Thanks
John



On Wed, Jan 31, 2018 at 7:09 AM natali aranda via RT
<met_help at ucar.edu>
wrote:

>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83857 >
>
> Hi John,
>
> I posted de data following the instructions.
>
> The file is: 3B-HHR.MS.MRG.3IMERG.20170707-S000000-
E002959.0000.V05B.HDF5
>
> Thanks for your help!
>
> Natalí
>
> 2018-01-30 17:31 GMT-03:00 John Halley Gotway via RT
<met_help at ucar.edu>:
>
> > Hi Natali,
> >
> > I see that you're trying to use IMERG data as input MET.  Can you
please
> > post a sample file to our anonymous ftp site following the
instructions
> > listed below?
> >    https://dtcenter.org/met/users/support/met_help.php#ftp
> >
> > Once I hear back from you that you've posted the data, I'll go
grab it
> and
> > take a closer look.
> >
> > Thanks,
> > John Halley Gotway
> > met_help at ucar.edu
> >
> >
> > On Tue, Jan 30, 2018 at 11:21 AM, natali aranda via RT <
> met_help at ucar.edu>
> > wrote:
> >
> > >
> > > Tue Jan 30 11:21:03 2018: Request 83857 was acted upon.
> > > Transaction: Ticket created by natali.g.aranda at gmail.com
> > >        Queue: met_help
> > >      Subject: MODE-MET
> > >        Owner: Nobody
> > >   Requestors: natali.g.aranda at gmail.com
> > >       Status: new
> > >  Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=83857
> >
> > >
> > >
> > > Hi, I’m working with the MET implementation of MODE. I use as
the
> > forecast
> > > the regional WRF from Argentina (grib files) and as the
observation,
> the
> > > satellite images from IMERG (HDF5 files).
> > >
> > > Can Met read HDF5 files? I know the LIDAR2NC tool works with
Calipso
> HDF
> > > data file but it is different to satellite images HDF5 data
files and
> > this
> > > tool doesn´t work with my observations. So I converted this HDF5
files
> > > (Imerg data) to NETCDF files with NCO but something it´s wrong
because
> > when
> > > I use the Regrid data Plane Tool (to regrid de IMERG netcdf file
to the
> > > regional WRF grid) and when I use MODE, I have this:
> > >
> > > *[naranda at rayo MET]$ bin/mode
> > > data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S000000-
> > > E002959.0000.V05B.nc
> > > <http://3B-HHR.MS.MRG.3IMERG.20170707-S000000-
E002959.0000.V05B.nc>
> > > MET/data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-
> > > S003000-E005959.0030.V05B.nc
> > > <http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-
E005959.0030.V05B.nc>
> > > tutorial/config/MODEConfig_tutorialnc -outdir tutorial/out/mode1
-v 2*
> > >
> > > *DEBUG 1: Default Config File:
> > >
/share/apps/Build_MET_Intel/MET/share/met/config/MODEConfig_default*
> > >
> > > *DEBUG 1: Match Config File:
tutorial/config/MODEConfig_tutorialnc*
> > >
> > > *DEBUG 1: Merge Config File:
tutorial/config/MODEConfig_tutorialnc*
> > >
> > > *ERROR  : *
> > >
> > > *ERROR  : Trouble reading forecast file
> > > "data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S000000-
> > > E002959.0000.V05B.nc
> > > <http://3B-HHR.MS.MRG.3IMERG.20170707-S000000-
E002959.0000.V05B.nc>"*
> > >
> > > *ERROR  :*
> > >
> > > *%%%%%%%%%%%%%%%%%%*
> > >
> > > *[naranda at rayo MET]$ bin/regrid_data_plane
> > > data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S003000-
> > > E005959.0030.V05B.nc
> > > <http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-
E005959.0030.V05B.nc>
> > > data/wrf_pp/prueba1 tutorial/out/regrid_data_plane/pepe.nc <
> > http://pepe.nc
> > > >
> > > -field 'name="Calp"; level="(*,*)";' -method BILIN -width 2*
> > >
> > > *DEBUG 1: Reading data file:
> > > data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S003000-
> > > E005959.0030.V05B.nc
> > > <http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-
E005959.0030.V05B.nc>*
> > >
> > > *ERROR  : *
> > >
> > > *ERROR  : process_data_file() ->
> > > "data/imerg_fr_nc/3B-HHR.MS.MRG.3IMERG.20170707-S003000-
> > > E005959.0030.V05B.nc
> > > <http://3B-HHR.MS.MRG.3IMERG.20170707-S003000-
E005959.0030.V05B.nc>"
> > not a
> > > valid data file*
> > >
> > > *ERROR  *
> > >
> > >
> > >
> > > I don´t know where is my mistake...
> > >
> > > Thanks,
> > >
> > >
> > > Natalí Aranda.
> > >
> > >
> >
> >
>
>

------------------------------------------------


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