[Met_help] [rt.rap.ucar.edu #93174] History for Error while running metplus in cron
Julie Prestopnik via RT
met_help at ucar.edu
Wed Dec 18 09:23:27 MST 2019
----------------------------------------------------------------
Initial Request
----------------------------------------------------------------
I am getting these errors in running METplus in cron that I am not getting while running interactively:
/global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc: error while loading shared libraries:
libpng16.so.16: cannot open shared object file: No such file or directory
/global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc: error while loading shared libraries:
libpng16.so.16: cannot open shared object file: No such file or directory
Can you suggest what I should be looking for to correct this? Should be a simple fix.
Thanks!
Perry
----------------------------------------------------------------
Complete Ticket History
----------------------------------------------------------------
Subject: Error while running metplus in cron
From: Julie Prestopnik
Time: Tue Nov 19 09:37:59 2019
Hi Perry.
I moved this question over to met_help. I see that you are having
trouble where you are getting some errors while running METplus in
cron, but not while running METplus interactively.
It seems to indicate that something is different with your
environment. I noticed that you were running the met-8.1_dev version.
Is it correct that met-8.1.2 contains the changes that you needed that
were in the met-8.1_dev version? If so, I'd suggest going ahead and
switching over to use met-8.1.2, which is now installed on tide:
module use /global/noscrub/Julie.Prestopnik/modulefiles
module load met/8.1
The modulefile for met should take care of the environment problem.
In previous correspondence between us on April 17th (email subject:
shared object file?), you had this same problem and it was determined
that the problem occurred because the MET module was not being
loaded. Is the MET module being loaded in this case?
Please try adding the following in front of your call to METplus in
your crontab:
module use /global/noscrub/Julie.Prestopnik/modulefiles; module load
met/8.1; <fill in call to METplus here>
and see if that works for you.
Thanks,Julie
On Tue Nov 19 09:26:10 2019, jpresto wrote:
> I am getting these errors in running METplus in cron that I am not
> getting while running interactively:
>
> /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc: error while
> loading shared libraries:
> libpng16.so.16: cannot open shared object file: No such file or
> directory
> /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc: error while
> loading shared libraries:
> libpng16.so.16: cannot open shared object file: No such file or
> directory
>
> Can you suggest what I should be looking for to correct this?
Should
> be a simple fix.
>
> Thanks!
>
> Perry
------------------------------------------------
Subject: Error while running metplus in cron
From: perry.shafran at noaa.gov
Time: Tue Nov 19 09:55:59 2019
Hi, Julie,
I'll try that. Just seemed weird that everything works fine when done
interactively but not OK when run in cron.
Perry
On Tue, Nov 19, 2019 at 11:38 AM Julie Prestopnik via RT
<met_help at ucar.edu>
wrote:
> Hi Perry.
>
> I moved this question over to met_help. I see that you are having
trouble
> where you are getting some errors while running METplus in cron, but
not
> while running METplus interactively.
>
> It seems to indicate that something is different with your
environment. I
> noticed that you were running the met-8.1_dev version. Is it correct
that
> met-8.1.2 contains the changes that you needed that were in the met-
8.1_dev
> version? If so, I'd suggest going ahead and switching over to use
> met-8.1.2, which is now installed on tide:
>
> module use /global/noscrub/Julie.Prestopnik/modulefiles
> module load met/8.1
>
> The modulefile for met should take care of the environment problem.
>
> In previous correspondence between us on April 17th (email subject:
shared
> object file?), you had this same problem and it was determined that
the
> problem occurred because the MET module was not being loaded. Is
the MET
> module being loaded in this case?
>
> Please try adding the following in front of your call to METplus in
your
> crontab:
> module use /global/noscrub/Julie.Prestopnik/modulefiles; module
load
> met/8.1; <fill in call to METplus here>
> and see if that works for you.
>
> Thanks,Julie
>
> On Tue Nov 19 09:26:10 2019, jpresto wrote:
> > I am getting these errors in running METplus in cron that I am not
> > getting while running interactively:
> >
> > /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc: error
while
> > loading shared libraries:
> > libpng16.so.16: cannot open shared object file: No such file or
> > directory
> > /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc: error
while
> > loading shared libraries:
> > libpng16.so.16: cannot open shared object file: No such file or
> > directory
> >
> > Can you suggest what I should be looking for to correct this?
Should
> > be a simple fix.
> >
> > Thanks!
> >
> > Perry
>
>
>
>
------------------------------------------------
Subject: Error while running metplus in cron
From: Julie Prestopnik
Time: Tue Nov 19 10:02:11 2019
Thinking about this more, I should mention that cron does not load
your
bash environment. If you have other things you need loaded from your
bash
environment, you could consider setting the environment in your cron
before
the call to METplus like this:
SHELL=/bin/bash
I hope that helps!
Julie
On Tue, Nov 19, 2019 at 9:56 AM perry.shafran at noaa.gov via RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
>
> Hi, Julie,
>
> I'll try that. Just seemed weird that everything works fine when
done
> interactively but not OK when run in cron.
>
> Perry
>
> On Tue, Nov 19, 2019 at 11:38 AM Julie Prestopnik via RT <
> met_help at ucar.edu>
> wrote:
>
> > Hi Perry.
> >
> > I moved this question over to met_help. I see that you are having
> trouble
> > where you are getting some errors while running METplus in cron,
but not
> > while running METplus interactively.
> >
> > It seems to indicate that something is different with your
environment.
> I
> > noticed that you were running the met-8.1_dev version. Is it
correct that
> > met-8.1.2 contains the changes that you needed that were in the
> met-8.1_dev
> > version? If so, I'd suggest going ahead and switching over to use
> > met-8.1.2, which is now installed on tide:
> >
> > module use /global/noscrub/Julie.Prestopnik/modulefiles
> > module load met/8.1
> >
> > The modulefile for met should take care of the environment
problem.
> >
> > In previous correspondence between us on April 17th (email
subject:
> shared
> > object file?), you had this same problem and it was determined
that the
> > problem occurred because the MET module was not being loaded. Is
the MET
> > module being loaded in this case?
> >
> > Please try adding the following in front of your call to METplus
in your
> > crontab:
> > module use /global/noscrub/Julie.Prestopnik/modulefiles; module
load
> > met/8.1; <fill in call to METplus here>
> > and see if that works for you.
> >
> > Thanks,Julie
> >
> > On Tue Nov 19 09:26:10 2019, jpresto wrote:
> > > I am getting these errors in running METplus in cron that I am
not
> > > getting while running interactively:
> > >
> > > /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc: error
while
> > > loading shared libraries:
> > > libpng16.so.16: cannot open shared object file: No such file or
> > > directory
> > > /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc: error
while
> > > loading shared libraries:
> > > libpng16.so.16: cannot open shared object file: No such file or
> > > directory
> > >
> > > Can you suggest what I should be looking for to correct this?
Should
> > > be a simple fix.
> > >
> > > Thanks!
> > >
> > > Perry
> >
> >
> >
> >
>
>
--
Julie Prestopnik
Software Engineer
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
My working day may not be your working day. Please do not feel
obliged to
reply to this email outside of your normal working hours.
------------------------------------------------
Subject: Error while running metplus in cron
From: perry.shafran at noaa.gov
Time: Tue Nov 19 10:38:13 2019
Hi, Julie,
Usually when calling the code in cron, I also add a call to my .bashrc
file
to ensure that the bash environment is activated, but maybe it doesn't
actually start a bash environment? I'll check that out.
Thanks!
Perry
On Tue, Nov 19, 2019 at 12:02 PM Julie Prestopnik via RT
<met_help at ucar.edu>
wrote:
> Thinking about this more, I should mention that cron does not load
your
> bash environment. If you have other things you need loaded from
your bash
> environment, you could consider setting the environment in your cron
before
> the call to METplus like this:
>
> SHELL=/bin/bash
>
> I hope that helps!
>
> Julie
>
> On Tue, Nov 19, 2019 at 9:56 AM perry.shafran at noaa.gov via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
> >
> > Hi, Julie,
> >
> > I'll try that. Just seemed weird that everything works fine when
done
> > interactively but not OK when run in cron.
> >
> > Perry
> >
> > On Tue, Nov 19, 2019 at 11:38 AM Julie Prestopnik via RT <
> > met_help at ucar.edu>
> > wrote:
> >
> > > Hi Perry.
> > >
> > > I moved this question over to met_help. I see that you are
having
> > trouble
> > > where you are getting some errors while running METplus in cron,
but
> not
> > > while running METplus interactively.
> > >
> > > It seems to indicate that something is different with your
environment.
> > I
> > > noticed that you were running the met-8.1_dev version. Is it
correct
> that
> > > met-8.1.2 contains the changes that you needed that were in the
> > met-8.1_dev
> > > version? If so, I'd suggest going ahead and switching over to
use
> > > met-8.1.2, which is now installed on tide:
> > >
> > > module use /global/noscrub/Julie.Prestopnik/modulefiles
> > > module load met/8.1
> > >
> > > The modulefile for met should take care of the environment
problem.
> > >
> > > In previous correspondence between us on April 17th (email
subject:
> > shared
> > > object file?), you had this same problem and it was determined
that the
> > > problem occurred because the MET module was not being loaded.
Is the
> MET
> > > module being loaded in this case?
> > >
> > > Please try adding the following in front of your call to METplus
in
> your
> > > crontab:
> > > module use /global/noscrub/Julie.Prestopnik/modulefiles;
module load
> > > met/8.1; <fill in call to METplus here>
> > > and see if that works for you.
> > >
> > > Thanks,Julie
> > >
> > > On Tue Nov 19 09:26:10 2019, jpresto wrote:
> > > > I am getting these errors in running METplus in cron that I am
not
> > > > getting while running interactively:
> > > >
> > > > /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc: error
while
> > > > loading shared libraries:
> > > > libpng16.so.16: cannot open shared object file: No such file
or
> > > > directory
> > > > /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc: error
while
> > > > loading shared libraries:
> > > > libpng16.so.16: cannot open shared object file: No such file
or
> > > > directory
> > > >
> > > > Can you suggest what I should be looking for to correct this?
Should
> > > > be a simple fix.
> > > >
> > > > Thanks!
> > > >
> > > > Perry
> > >
> > >
> > >
> > >
> >
> >
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged to
> reply to this email outside of your normal working hours.
>
>
------------------------------------------------
Subject: Error while running metplus in cron
From: Julie Prestopnik
Time: Tue Nov 19 10:41:04 2019
Hi Perry.
It is my understanding that your .bashrc file is not called when a
process
is run from cron unless you specifically set the SHELL variable within
your
crontab file.
Please let us know how it goes.
Julie
On Tue, Nov 19, 2019 at 10:38 AM perry.shafran at noaa.gov via RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
>
> Hi, Julie,
>
> Usually when calling the code in cron, I also add a call to my
.bashrc file
> to ensure that the bash environment is activated, but maybe it
doesn't
> actually start a bash environment? I'll check that out.
>
> Thanks!
>
> Perry
>
> On Tue, Nov 19, 2019 at 12:02 PM Julie Prestopnik via RT <
> met_help at ucar.edu>
> wrote:
>
> > Thinking about this more, I should mention that cron does not load
your
> > bash environment. If you have other things you need loaded from
your
> bash
> > environment, you could consider setting the environment in your
cron
> before
> > the call to METplus like this:
> >
> > SHELL=/bin/bash
> >
> > I hope that helps!
> >
> > Julie
> >
> > On Tue, Nov 19, 2019 at 9:56 AM perry.shafran at noaa.gov via RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
> > >
> > > Hi, Julie,
> > >
> > > I'll try that. Just seemed weird that everything works fine
when done
> > > interactively but not OK when run in cron.
> > >
> > > Perry
> > >
> > > On Tue, Nov 19, 2019 at 11:38 AM Julie Prestopnik via RT <
> > > met_help at ucar.edu>
> > > wrote:
> > >
> > > > Hi Perry.
> > > >
> > > > I moved this question over to met_help. I see that you are
having
> > > trouble
> > > > where you are getting some errors while running METplus in
cron, but
> > not
> > > > while running METplus interactively.
> > > >
> > > > It seems to indicate that something is different with your
> environment.
> > > I
> > > > noticed that you were running the met-8.1_dev version. Is it
correct
> > that
> > > > met-8.1.2 contains the changes that you needed that were in
the
> > > met-8.1_dev
> > > > version? If so, I'd suggest going ahead and switching over to
use
> > > > met-8.1.2, which is now installed on tide:
> > > >
> > > > module use /global/noscrub/Julie.Prestopnik/modulefiles
> > > > module load met/8.1
> > > >
> > > > The modulefile for met should take care of the environment
problem.
> > > >
> > > > In previous correspondence between us on April 17th (email
subject:
> > > shared
> > > > object file?), you had this same problem and it was determined
that
> the
> > > > problem occurred because the MET module was not being loaded.
Is the
> > MET
> > > > module being loaded in this case?
> > > >
> > > > Please try adding the following in front of your call to
METplus in
> > your
> > > > crontab:
> > > > module use /global/noscrub/Julie.Prestopnik/modulefiles;
module
> load
> > > > met/8.1; <fill in call to METplus here>
> > > > and see if that works for you.
> > > >
> > > > Thanks,Julie
> > > >
> > > > On Tue Nov 19 09:26:10 2019, jpresto wrote:
> > > > > I am getting these errors in running METplus in cron that I
am not
> > > > > getting while running interactively:
> > > > >
> > > > > /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc:
error while
> > > > > loading shared libraries:
> > > > > libpng16.so.16: cannot open shared object file: No such file
or
> > > > > directory
> > > > > /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc:
error while
> > > > > loading shared libraries:
> > > > > libpng16.so.16: cannot open shared object file: No such file
or
> > > > > directory
> > > > >
> > > > > Can you suggest what I should be looking for to correct
this?
> Should
> > > > > be a simple fix.
> > > > >
> > > > > Thanks!
> > > > >
> > > > > Perry
> > > >
> > > >
> > > >
> > > >
> > >
> > >
> >
> > --
> > Julie Prestopnik
> > Software Engineer
> > National Center for Atmospheric Research
> > Research Applications Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> > My working day may not be your working day. Please do not feel
obliged
> to
> > reply to this email outside of your normal working hours.
> >
> >
>
>
--
Julie Prestopnik
Software Engineer
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
My working day may not be your working day. Please do not feel
obliged to
reply to this email outside of your normal working hours.
------------------------------------------------
Subject: Error while running metplus in cron
From: perry.shafran at noaa.gov
Time: Wed Nov 20 07:00:00 2019
Hi, Julie,
I believe I have figured it out. The change I needed to make was in
the
bashrc to ensure that I set the modules properly (to met/8.1). Once I
did
that, pb2nc started to run properly in cron. I have a few runs going,
and
I'll let you know if they finish.
Thanks!
Perry
On Tue, Nov 19, 2019 at 12:41 PM Julie Prestopnik via RT
<met_help at ucar.edu>
wrote:
> Hi Perry.
>
> It is my understanding that your .bashrc file is not called when a
process
> is run from cron unless you specifically set the SHELL variable
within your
> crontab file.
>
> Please let us know how it goes.
>
> Julie
>
> On Tue, Nov 19, 2019 at 10:38 AM perry.shafran at noaa.gov via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
> >
> > Hi, Julie,
> >
> > Usually when calling the code in cron, I also add a call to my
.bashrc
> file
> > to ensure that the bash environment is activated, but maybe it
doesn't
> > actually start a bash environment? I'll check that out.
> >
> > Thanks!
> >
> > Perry
> >
> > On Tue, Nov 19, 2019 at 12:02 PM Julie Prestopnik via RT <
> > met_help at ucar.edu>
> > wrote:
> >
> > > Thinking about this more, I should mention that cron does not
load your
> > > bash environment. If you have other things you need loaded from
your
> > bash
> > > environment, you could consider setting the environment in your
cron
> > before
> > > the call to METplus like this:
> > >
> > > SHELL=/bin/bash
> > >
> > > I hope that helps!
> > >
> > > Julie
> > >
> > > On Tue, Nov 19, 2019 at 9:56 AM perry.shafran at noaa.gov via RT <
> > > met_help at ucar.edu> wrote:
> > >
> > > >
> > > > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174
>
> > > >
> > > > Hi, Julie,
> > > >
> > > > I'll try that. Just seemed weird that everything works fine
when
> done
> > > > interactively but not OK when run in cron.
> > > >
> > > > Perry
> > > >
> > > > On Tue, Nov 19, 2019 at 11:38 AM Julie Prestopnik via RT <
> > > > met_help at ucar.edu>
> > > > wrote:
> > > >
> > > > > Hi Perry.
> > > > >
> > > > > I moved this question over to met_help. I see that you are
having
> > > > trouble
> > > > > where you are getting some errors while running METplus in
cron,
> but
> > > not
> > > > > while running METplus interactively.
> > > > >
> > > > > It seems to indicate that something is different with your
> > environment.
> > > > I
> > > > > noticed that you were running the met-8.1_dev version. Is it
> correct
> > > that
> > > > > met-8.1.2 contains the changes that you needed that were in
the
> > > > met-8.1_dev
> > > > > version? If so, I'd suggest going ahead and switching over
to use
> > > > > met-8.1.2, which is now installed on tide:
> > > > >
> > > > > module use /global/noscrub/Julie.Prestopnik/modulefiles
> > > > > module load met/8.1
> > > > >
> > > > > The modulefile for met should take care of the environment
problem.
> > > > >
> > > > > In previous correspondence between us on April 17th (email
subject:
> > > > shared
> > > > > object file?), you had this same problem and it was
determined that
> > the
> > > > > problem occurred because the MET module was not being
loaded. Is
> the
> > > MET
> > > > > module being loaded in this case?
> > > > >
> > > > > Please try adding the following in front of your call to
METplus in
> > > your
> > > > > crontab:
> > > > > module use /global/noscrub/Julie.Prestopnik/modulefiles;
module
> > load
> > > > > met/8.1; <fill in call to METplus here>
> > > > > and see if that works for you.
> > > > >
> > > > > Thanks,Julie
> > > > >
> > > > > On Tue Nov 19 09:26:10 2019, jpresto wrote:
> > > > > > I am getting these errors in running METplus in cron that
I am
> not
> > > > > > getting while running interactively:
> > > > > >
> > > > > > /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc:
error
> while
> > > > > > loading shared libraries:
> > > > > > libpng16.so.16: cannot open shared object file: No such
file or
> > > > > > directory
> > > > > > /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc:
error
> while
> > > > > > loading shared libraries:
> > > > > > libpng16.so.16: cannot open shared object file: No such
file or
> > > > > > directory
> > > > > >
> > > > > > Can you suggest what I should be looking for to correct
this?
> > Should
> > > > > > be a simple fix.
> > > > > >
> > > > > > Thanks!
> > > > > >
> > > > > > Perry
> > > > >
> > > > >
> > > > >
> > > > >
> > > >
> > > >
> > >
> > > --
> > > Julie Prestopnik
> > > Software Engineer
> > > National Center for Atmospheric Research
> > > Research Applications Laboratory
> > > Phone: 303.497.8399
> > > Email: jpresto at ucar.edu
> > >
> > > My working day may not be your working day. Please do not feel
obliged
> > to
> > > reply to this email outside of your normal working hours.
> > >
> > >
> >
> >
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged to
> reply to this email outside of your normal working hours.
>
>
------------------------------------------------
Subject: Error while running metplus in cron
From: Julie Prestopnik
Time: Wed Nov 20 08:36:03 2019
Great, Perry! Thanks for letting us know. I'll keep this ticket open
until you confirm that you a successful run.
Julie
On Wed, Nov 20, 2019 at 7:00 AM perry.shafran at noaa.gov via RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
>
> Hi, Julie,
>
> I believe I have figured it out. The change I needed to make was in
the
> bashrc to ensure that I set the modules properly (to met/8.1). Once
I did
> that, pb2nc started to run properly in cron. I have a few runs
going, and
> I'll let you know if they finish.
>
> Thanks!
>
> Perry
>
> On Tue, Nov 19, 2019 at 12:41 PM Julie Prestopnik via RT <
> met_help at ucar.edu>
> wrote:
>
> > Hi Perry.
> >
> > It is my understanding that your .bashrc file is not called when a
> process
> > is run from cron unless you specifically set the SHELL variable
within
> your
> > crontab file.
> >
> > Please let us know how it goes.
> >
> > Julie
> >
> > On Tue, Nov 19, 2019 at 10:38 AM perry.shafran at noaa.gov via RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
> > >
> > > Hi, Julie,
> > >
> > > Usually when calling the code in cron, I also add a call to my
.bashrc
> > file
> > > to ensure that the bash environment is activated, but maybe it
doesn't
> > > actually start a bash environment? I'll check that out.
> > >
> > > Thanks!
> > >
> > > Perry
> > >
> > > On Tue, Nov 19, 2019 at 12:02 PM Julie Prestopnik via RT <
> > > met_help at ucar.edu>
> > > wrote:
> > >
> > > > Thinking about this more, I should mention that cron does not
load
> your
> > > > bash environment. If you have other things you need loaded
from your
> > > bash
> > > > environment, you could consider setting the environment in
your cron
> > > before
> > > > the call to METplus like this:
> > > >
> > > > SHELL=/bin/bash
> > > >
> > > > I hope that helps!
> > > >
> > > > Julie
> > > >
> > > > On Tue, Nov 19, 2019 at 9:56 AM perry.shafran at noaa.gov via RT
<
> > > > met_help at ucar.edu> wrote:
> > > >
> > > > >
> > > > > <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
> > > > >
> > > > > Hi, Julie,
> > > > >
> > > > > I'll try that. Just seemed weird that everything works fine
when
> > done
> > > > > interactively but not OK when run in cron.
> > > > >
> > > > > Perry
> > > > >
> > > > > On Tue, Nov 19, 2019 at 11:38 AM Julie Prestopnik via RT <
> > > > > met_help at ucar.edu>
> > > > > wrote:
> > > > >
> > > > > > Hi Perry.
> > > > > >
> > > > > > I moved this question over to met_help. I see that you
are
> having
> > > > > trouble
> > > > > > where you are getting some errors while running METplus in
cron,
> > but
> > > > not
> > > > > > while running METplus interactively.
> > > > > >
> > > > > > It seems to indicate that something is different with your
> > > environment.
> > > > > I
> > > > > > noticed that you were running the met-8.1_dev version. Is
it
> > correct
> > > > that
> > > > > > met-8.1.2 contains the changes that you needed that were
in the
> > > > > met-8.1_dev
> > > > > > version? If so, I'd suggest going ahead and switching
over to
> use
> > > > > > met-8.1.2, which is now installed on tide:
> > > > > >
> > > > > > module use /global/noscrub/Julie.Prestopnik/modulefiles
> > > > > > module load met/8.1
> > > > > >
> > > > > > The modulefile for met should take care of the environment
> problem.
> > > > > >
> > > > > > In previous correspondence between us on April 17th (email
> subject:
> > > > > shared
> > > > > > object file?), you had this same problem and it was
determined
> that
> > > the
> > > > > > problem occurred because the MET module was not being
loaded. Is
> > the
> > > > MET
> > > > > > module being loaded in this case?
> > > > > >
> > > > > > Please try adding the following in front of your call to
METplus
> in
> > > > your
> > > > > > crontab:
> > > > > > module use /global/noscrub/Julie.Prestopnik/modulefiles;
module
> > > load
> > > > > > met/8.1; <fill in call to METplus here>
> > > > > > and see if that works for you.
> > > > > >
> > > > > > Thanks,Julie
> > > > > >
> > > > > > On Tue Nov 19 09:26:10 2019, jpresto wrote:
> > > > > > > I am getting these errors in running METplus in cron
that I am
> > not
> > > > > > > getting while running interactively:
> > > > > > >
> > > > > > > /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc:
error
> > while
> > > > > > > loading shared libraries:
> > > > > > > libpng16.so.16: cannot open shared object file: No such
file or
> > > > > > > directory
> > > > > > > /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc:
error
> > while
> > > > > > > loading shared libraries:
> > > > > > > libpng16.so.16: cannot open shared object file: No such
file or
> > > > > > > directory
> > > > > > >
> > > > > > > Can you suggest what I should be looking for to correct
this?
> > > Should
> > > > > > > be a simple fix.
> > > > > > >
> > > > > > > Thanks!
> > > > > > >
> > > > > > > Perry
> > > > > >
> > > > > >
> > > > > >
> > > > > >
> > > > >
> > > > >
> > > >
> > > > --
> > > > Julie Prestopnik
> > > > Software Engineer
> > > > National Center for Atmospheric Research
> > > > Research Applications Laboratory
> > > > Phone: 303.497.8399
> > > > Email: jpresto at ucar.edu
> > > >
> > > > My working day may not be your working day. Please do not
feel
> obliged
> > > to
> > > > reply to this email outside of your normal working hours.
> > > >
> > > >
> > >
> > >
> >
> > --
> > Julie Prestopnik
> > Software Engineer
> > National Center for Atmospheric Research
> > Research Applications Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> > My working day may not be your working day. Please do not feel
obliged
> to
> > reply to this email outside of your normal working hours.
> >
> >
>
>
--
Julie Prestopnik
Software Engineer
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
My working day may not be your working day. Please do not feel
obliged to
reply to this email outside of your normal working hours.
------------------------------------------------
Subject: Error while running metplus in cron
From: Julie Prestopnik
Time: Tue Dec 17 10:22:48 2019
Hi Perry. I just wanted to follow up on this and see if you were able
to
get a successful run?
On Wed, Nov 20, 2019 at 8:35 AM Julie Prestopnik <jpresto at ucar.edu>
wrote:
> Great, Perry! Thanks for letting us know. I'll keep this ticket
open
> until you confirm that you a successful run.
>
> Julie
>
> On Wed, Nov 20, 2019 at 7:00 AM perry.shafran at noaa.gov via RT <
> met_help at ucar.edu> wrote:
>
>>
>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
>>
>> Hi, Julie,
>>
>> I believe I have figured it out. The change I needed to make was
in the
>> bashrc to ensure that I set the modules properly (to met/8.1).
Once I did
>> that, pb2nc started to run properly in cron. I have a few runs
going, and
>> I'll let you know if they finish.
>>
>> Thanks!
>>
>> Perry
>>
>> On Tue, Nov 19, 2019 at 12:41 PM Julie Prestopnik via RT <
>> met_help at ucar.edu>
>> wrote:
>>
>> > Hi Perry.
>> >
>> > It is my understanding that your .bashrc file is not called when
a
>> process
>> > is run from cron unless you specifically set the SHELL variable
within
>> your
>> > crontab file.
>> >
>> > Please let us know how it goes.
>> >
>> > Julie
>> >
>> > On Tue, Nov 19, 2019 at 10:38 AM perry.shafran at noaa.gov via RT <
>> > met_help at ucar.edu> wrote:
>> >
>> > >
>> > > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
>> > >
>> > > Hi, Julie,
>> > >
>> > > Usually when calling the code in cron, I also add a call to my
.bashrc
>> > file
>> > > to ensure that the bash environment is activated, but maybe it
doesn't
>> > > actually start a bash environment? I'll check that out.
>> > >
>> > > Thanks!
>> > >
>> > > Perry
>> > >
>> > > On Tue, Nov 19, 2019 at 12:02 PM Julie Prestopnik via RT <
>> > > met_help at ucar.edu>
>> > > wrote:
>> > >
>> > > > Thinking about this more, I should mention that cron does not
load
>> your
>> > > > bash environment. If you have other things you need loaded
from
>> your
>> > > bash
>> > > > environment, you could consider setting the environment in
your cron
>> > > before
>> > > > the call to METplus like this:
>> > > >
>> > > > SHELL=/bin/bash
>> > > >
>> > > > I hope that helps!
>> > > >
>> > > > Julie
>> > > >
>> > > > On Tue, Nov 19, 2019 at 9:56 AM perry.shafran at noaa.gov via RT
<
>> > > > met_help at ucar.edu> wrote:
>> > > >
>> > > > >
>> > > > > <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
>> > > > >
>> > > > > Hi, Julie,
>> > > > >
>> > > > > I'll try that. Just seemed weird that everything works
fine when
>> > done
>> > > > > interactively but not OK when run in cron.
>> > > > >
>> > > > > Perry
>> > > > >
>> > > > > On Tue, Nov 19, 2019 at 11:38 AM Julie Prestopnik via RT <
>> > > > > met_help at ucar.edu>
>> > > > > wrote:
>> > > > >
>> > > > > > Hi Perry.
>> > > > > >
>> > > > > > I moved this question over to met_help. I see that you
are
>> having
>> > > > > trouble
>> > > > > > where you are getting some errors while running METplus
in cron,
>> > but
>> > > > not
>> > > > > > while running METplus interactively.
>> > > > > >
>> > > > > > It seems to indicate that something is different with
your
>> > > environment.
>> > > > > I
>> > > > > > noticed that you were running the met-8.1_dev version. Is
it
>> > correct
>> > > > that
>> > > > > > met-8.1.2 contains the changes that you needed that were
in the
>> > > > > met-8.1_dev
>> > > > > > version? If so, I'd suggest going ahead and switching
over to
>> use
>> > > > > > met-8.1.2, which is now installed on tide:
>> > > > > >
>> > > > > > module use /global/noscrub/Julie.Prestopnik/modulefiles
>> > > > > > module load met/8.1
>> > > > > >
>> > > > > > The modulefile for met should take care of the
environment
>> problem.
>> > > > > >
>> > > > > > In previous correspondence between us on April 17th
(email
>> subject:
>> > > > > shared
>> > > > > > object file?), you had this same problem and it was
determined
>> that
>> > > the
>> > > > > > problem occurred because the MET module was not being
loaded.
>> Is
>> > the
>> > > > MET
>> > > > > > module being loaded in this case?
>> > > > > >
>> > > > > > Please try adding the following in front of your call to
>> METplus in
>> > > > your
>> > > > > > crontab:
>> > > > > > module use
/global/noscrub/Julie.Prestopnik/modulefiles;
>> module
>> > > load
>> > > > > > met/8.1; <fill in call to METplus here>
>> > > > > > and see if that works for you.
>> > > > > >
>> > > > > > Thanks,Julie
>> > > > > >
>> > > > > > On Tue Nov 19 09:26:10 2019, jpresto wrote:
>> > > > > > > I am getting these errors in running METplus in cron
that I am
>> > not
>> > > > > > > getting while running interactively:
>> > > > > > >
>> > > > > > > /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc:
error
>> > while
>> > > > > > > loading shared libraries:
>> > > > > > > libpng16.so.16: cannot open shared object file: No such
file
>> or
>> > > > > > > directory
>> > > > > > > /global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc:
error
>> > while
>> > > > > > > loading shared libraries:
>> > > > > > > libpng16.so.16: cannot open shared object file: No such
file
>> or
>> > > > > > > directory
>> > > > > > >
>> > > > > > > Can you suggest what I should be looking for to correct
this?
>> > > Should
>> > > > > > > be a simple fix.
>> > > > > > >
>> > > > > > > Thanks!
>> > > > > > >
>> > > > > > > Perry
>> > > > > >
>> > > > > >
>> > > > > >
>> > > > > >
>> > > > >
>> > > > >
>> > > >
>> > > > --
>> > > > Julie Prestopnik
>> > > > Software Engineer
>> > > > National Center for Atmospheric Research
>> > > > Research Applications Laboratory
>> > > > Phone: 303.497.8399
>> > > > Email: jpresto at ucar.edu
>> > > >
>> > > > My working day may not be your working day. Please do not
feel
>> obliged
>> > > to
>> > > > reply to this email outside of your normal working hours.
>> > > >
>> > > >
>> > >
>> > >
>> >
>> > --
>> > Julie Prestopnik
>> > Software Engineer
>> > National Center for Atmospheric Research
>> > Research Applications Laboratory
>> > Phone: 303.497.8399
>> > Email: jpresto at ucar.edu
>> >
>> > My working day may not be your working day. Please do not feel
obliged
>> to
>> > reply to this email outside of your normal working hours.
>> >
>> >
>>
>>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged to
> reply to this email outside of your normal working hours.
>
--
Julie Prestopnik
Software Engineer
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
My working day may not be your working day. Please do not feel
obliged to
reply to this email outside of your normal working hours.
------------------------------------------------
Subject: Error while running metplus in cron
From: perry.shafran at noaa.gov
Time: Tue Dec 17 12:18:39 2019
Hi, Julie,
Oh yes, I've had many successful runs using cron. I forgot that I had
this
ticket open, so you should close it now.
Thanks!
Perry
On Tue, Dec 17, 2019 at 12:34 PM Julie Prestopnik via RT
<met_help at ucar.edu>
wrote:
> Hi Perry. I just wanted to follow up on this and see if you were
able to
> get a successful run?
>
> On Wed, Nov 20, 2019 at 8:35 AM Julie Prestopnik <jpresto at ucar.edu>
wrote:
>
> > Great, Perry! Thanks for letting us know. I'll keep this ticket
open
> > until you confirm that you a successful run.
> >
> > Julie
> >
> > On Wed, Nov 20, 2019 at 7:00 AM perry.shafran at noaa.gov via RT <
> > met_help at ucar.edu> wrote:
> >
> >>
> >> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
> >>
> >> Hi, Julie,
> >>
> >> I believe I have figured it out. The change I needed to make was
in the
> >> bashrc to ensure that I set the modules properly (to met/8.1).
Once I
> did
> >> that, pb2nc started to run properly in cron. I have a few runs
going,
> and
> >> I'll let you know if they finish.
> >>
> >> Thanks!
> >>
> >> Perry
> >>
> >> On Tue, Nov 19, 2019 at 12:41 PM Julie Prestopnik via RT <
> >> met_help at ucar.edu>
> >> wrote:
> >>
> >> > Hi Perry.
> >> >
> >> > It is my understanding that your .bashrc file is not called
when a
> >> process
> >> > is run from cron unless you specifically set the SHELL variable
within
> >> your
> >> > crontab file.
> >> >
> >> > Please let us know how it goes.
> >> >
> >> > Julie
> >> >
> >> > On Tue, Nov 19, 2019 at 10:38 AM perry.shafran at noaa.gov via RT
<
> >> > met_help at ucar.edu> wrote:
> >> >
> >> > >
> >> > > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174
>
> >> > >
> >> > > Hi, Julie,
> >> > >
> >> > > Usually when calling the code in cron, I also add a call to
my
> .bashrc
> >> > file
> >> > > to ensure that the bash environment is activated, but maybe
it
> doesn't
> >> > > actually start a bash environment? I'll check that out.
> >> > >
> >> > > Thanks!
> >> > >
> >> > > Perry
> >> > >
> >> > > On Tue, Nov 19, 2019 at 12:02 PM Julie Prestopnik via RT <
> >> > > met_help at ucar.edu>
> >> > > wrote:
> >> > >
> >> > > > Thinking about this more, I should mention that cron does
not load
> >> your
> >> > > > bash environment. If you have other things you need loaded
from
> >> your
> >> > > bash
> >> > > > environment, you could consider setting the environment in
your
> cron
> >> > > before
> >> > > > the call to METplus like this:
> >> > > >
> >> > > > SHELL=/bin/bash
> >> > > >
> >> > > > I hope that helps!
> >> > > >
> >> > > > Julie
> >> > > >
> >> > > > On Tue, Nov 19, 2019 at 9:56 AM perry.shafran at noaa.gov via
RT <
> >> > > > met_help at ucar.edu> wrote:
> >> > > >
> >> > > > >
> >> > > > > <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
> >> > > > >
> >> > > > > Hi, Julie,
> >> > > > >
> >> > > > > I'll try that. Just seemed weird that everything works
fine
> when
> >> > done
> >> > > > > interactively but not OK when run in cron.
> >> > > > >
> >> > > > > Perry
> >> > > > >
> >> > > > > On Tue, Nov 19, 2019 at 11:38 AM Julie Prestopnik via RT
<
> >> > > > > met_help at ucar.edu>
> >> > > > > wrote:
> >> > > > >
> >> > > > > > Hi Perry.
> >> > > > > >
> >> > > > > > I moved this question over to met_help. I see that you
are
> >> having
> >> > > > > trouble
> >> > > > > > where you are getting some errors while running METplus
in
> cron,
> >> > but
> >> > > > not
> >> > > > > > while running METplus interactively.
> >> > > > > >
> >> > > > > > It seems to indicate that something is different with
your
> >> > > environment.
> >> > > > > I
> >> > > > > > noticed that you were running the met-8.1_dev version.
Is it
> >> > correct
> >> > > > that
> >> > > > > > met-8.1.2 contains the changes that you needed that
were in
> the
> >> > > > > met-8.1_dev
> >> > > > > > version? If so, I'd suggest going ahead and switching
over to
> >> use
> >> > > > > > met-8.1.2, which is now installed on tide:
> >> > > > > >
> >> > > > > > module use /global/noscrub/Julie.Prestopnik/modulefiles
> >> > > > > > module load met/8.1
> >> > > > > >
> >> > > > > > The modulefile for met should take care of the
environment
> >> problem.
> >> > > > > >
> >> > > > > > In previous correspondence between us on April 17th
(email
> >> subject:
> >> > > > > shared
> >> > > > > > object file?), you had this same problem and it was
determined
> >> that
> >> > > the
> >> > > > > > problem occurred because the MET module was not being
loaded.
> >> Is
> >> > the
> >> > > > MET
> >> > > > > > module being loaded in this case?
> >> > > > > >
> >> > > > > > Please try adding the following in front of your call
to
> >> METplus in
> >> > > > your
> >> > > > > > crontab:
> >> > > > > > module use
/global/noscrub/Julie.Prestopnik/modulefiles;
> >> module
> >> > > load
> >> > > > > > met/8.1; <fill in call to METplus here>
> >> > > > > > and see if that works for you.
> >> > > > > >
> >> > > > > > Thanks,Julie
> >> > > > > >
> >> > > > > > On Tue Nov 19 09:26:10 2019, jpresto wrote:
> >> > > > > > > I am getting these errors in running METplus in cron
that I
> am
> >> > not
> >> > > > > > > getting while running interactively:
> >> > > > > > >
> >> > > > > > >
/global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc:
> error
> >> > while
> >> > > > > > > loading shared libraries:
> >> > > > > > > libpng16.so.16: cannot open shared object file: No
such file
> >> or
> >> > > > > > > directory
> >> > > > > > >
/global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc:
> error
> >> > while
> >> > > > > > > loading shared libraries:
> >> > > > > > > libpng16.so.16: cannot open shared object file: No
such file
> >> or
> >> > > > > > > directory
> >> > > > > > >
> >> > > > > > > Can you suggest what I should be looking for to
correct
> this?
> >> > > Should
> >> > > > > > > be a simple fix.
> >> > > > > > >
> >> > > > > > > Thanks!
> >> > > > > > >
> >> > > > > > > Perry
> >> > > > > >
> >> > > > > >
> >> > > > > >
> >> > > > > >
> >> > > > >
> >> > > > >
> >> > > >
> >> > > > --
> >> > > > Julie Prestopnik
> >> > > > Software Engineer
> >> > > > National Center for Atmospheric Research
> >> > > > Research Applications Laboratory
> >> > > > Phone: 303.497.8399
> >> > > > Email: jpresto at ucar.edu
> >> > > >
> >> > > > My working day may not be your working day. Please do not
feel
> >> obliged
> >> > > to
> >> > > > reply to this email outside of your normal working hours.
> >> > > >
> >> > > >
> >> > >
> >> > >
> >> >
> >> > --
> >> > Julie Prestopnik
> >> > Software Engineer
> >> > National Center for Atmospheric Research
> >> > Research Applications Laboratory
> >> > Phone: 303.497.8399
> >> > Email: jpresto at ucar.edu
> >> >
> >> > My working day may not be your working day. Please do not feel
> obliged
> >> to
> >> > reply to this email outside of your normal working hours.
> >> >
> >> >
> >>
> >>
> >
> > --
> > Julie Prestopnik
> > Software Engineer
> > National Center for Atmospheric Research
> > Research Applications Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> > My working day may not be your working day. Please do not feel
obliged
> to
> > reply to this email outside of your normal working hours.
> >
>
>
> --
> Julie Prestopnik
> Software Engineer
> National Center for Atmospheric Research
> Research Applications Laboratory
> Phone: 303.497.8399
> Email: jpresto at ucar.edu
>
> My working day may not be your working day. Please do not feel
obliged to
> reply to this email outside of your normal working hours.
>
>
------------------------------------------------
Subject: Error while running metplus in cron
From: Julie Prestopnik
Time: Wed Dec 18 09:23:23 2019
Thank you, Perry!
On Tue, Dec 17, 2019 at 12:18 PM perry.shafran at noaa.gov via RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
>
> Hi, Julie,
>
> Oh yes, I've had many successful runs using cron. I forgot that I
had this
> ticket open, so you should close it now.
>
> Thanks!
>
> Perry
>
> On Tue, Dec 17, 2019 at 12:34 PM Julie Prestopnik via RT <
> met_help at ucar.edu>
> wrote:
>
> > Hi Perry. I just wanted to follow up on this and see if you were
able to
> > get a successful run?
> >
> > On Wed, Nov 20, 2019 at 8:35 AM Julie Prestopnik
<jpresto at ucar.edu>
> wrote:
> >
> > > Great, Perry! Thanks for letting us know. I'll keep this
ticket open
> > > until you confirm that you a successful run.
> > >
> > > Julie
> > >
> > > On Wed, Nov 20, 2019 at 7:00 AM perry.shafran at noaa.gov via RT <
> > > met_help at ucar.edu> wrote:
> > >
> > >>
> > >> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
> > >>
> > >> Hi, Julie,
> > >>
> > >> I believe I have figured it out. The change I needed to make
was in
> the
> > >> bashrc to ensure that I set the modules properly (to met/8.1).
Once I
> > did
> > >> that, pb2nc started to run properly in cron. I have a few runs
going,
> > and
> > >> I'll let you know if they finish.
> > >>
> > >> Thanks!
> > >>
> > >> Perry
> > >>
> > >> On Tue, Nov 19, 2019 at 12:41 PM Julie Prestopnik via RT <
> > >> met_help at ucar.edu>
> > >> wrote:
> > >>
> > >> > Hi Perry.
> > >> >
> > >> > It is my understanding that your .bashrc file is not called
when a
> > >> process
> > >> > is run from cron unless you specifically set the SHELL
variable
> within
> > >> your
> > >> > crontab file.
> > >> >
> > >> > Please let us know how it goes.
> > >> >
> > >> > Julie
> > >> >
> > >> > On Tue, Nov 19, 2019 at 10:38 AM perry.shafran at noaa.gov via
RT <
> > >> > met_help at ucar.edu> wrote:
> > >> >
> > >> > >
> > >> > > <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174 >
> > >> > >
> > >> > > Hi, Julie,
> > >> > >
> > >> > > Usually when calling the code in cron, I also add a call to
my
> > .bashrc
> > >> > file
> > >> > > to ensure that the bash environment is activated, but maybe
it
> > doesn't
> > >> > > actually start a bash environment? I'll check that out.
> > >> > >
> > >> > > Thanks!
> > >> > >
> > >> > > Perry
> > >> > >
> > >> > > On Tue, Nov 19, 2019 at 12:02 PM Julie Prestopnik via RT <
> > >> > > met_help at ucar.edu>
> > >> > > wrote:
> > >> > >
> > >> > > > Thinking about this more, I should mention that cron does
not
> load
> > >> your
> > >> > > > bash environment. If you have other things you need
loaded from
> > >> your
> > >> > > bash
> > >> > > > environment, you could consider setting the environment
in your
> > cron
> > >> > > before
> > >> > > > the call to METplus like this:
> > >> > > >
> > >> > > > SHELL=/bin/bash
> > >> > > >
> > >> > > > I hope that helps!
> > >> > > >
> > >> > > > Julie
> > >> > > >
> > >> > > > On Tue, Nov 19, 2019 at 9:56 AM perry.shafran at noaa.gov
via RT <
> > >> > > > met_help at ucar.edu> wrote:
> > >> > > >
> > >> > > > >
> > >> > > > > <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=93174
> >
> > >> > > > >
> > >> > > > > Hi, Julie,
> > >> > > > >
> > >> > > > > I'll try that. Just seemed weird that everything works
fine
> > when
> > >> > done
> > >> > > > > interactively but not OK when run in cron.
> > >> > > > >
> > >> > > > > Perry
> > >> > > > >
> > >> > > > > On Tue, Nov 19, 2019 at 11:38 AM Julie Prestopnik via
RT <
> > >> > > > > met_help at ucar.edu>
> > >> > > > > wrote:
> > >> > > > >
> > >> > > > > > Hi Perry.
> > >> > > > > >
> > >> > > > > > I moved this question over to met_help. I see that
you are
> > >> having
> > >> > > > > trouble
> > >> > > > > > where you are getting some errors while running
METplus in
> > cron,
> > >> > but
> > >> > > > not
> > >> > > > > > while running METplus interactively.
> > >> > > > > >
> > >> > > > > > It seems to indicate that something is different with
your
> > >> > > environment.
> > >> > > > > I
> > >> > > > > > noticed that you were running the met-8.1_dev
version. Is it
> > >> > correct
> > >> > > > that
> > >> > > > > > met-8.1.2 contains the changes that you needed that
were in
> > the
> > >> > > > > met-8.1_dev
> > >> > > > > > version? If so, I'd suggest going ahead and
switching over
> to
> > >> use
> > >> > > > > > met-8.1.2, which is now installed on tide:
> > >> > > > > >
> > >> > > > > > module use
/global/noscrub/Julie.Prestopnik/modulefiles
> > >> > > > > > module load met/8.1
> > >> > > > > >
> > >> > > > > > The modulefile for met should take care of the
environment
> > >> problem.
> > >> > > > > >
> > >> > > > > > In previous correspondence between us on April 17th
(email
> > >> subject:
> > >> > > > > shared
> > >> > > > > > object file?), you had this same problem and it was
> determined
> > >> that
> > >> > > the
> > >> > > > > > problem occurred because the MET module was not being
> loaded.
> > >> Is
> > >> > the
> > >> > > > MET
> > >> > > > > > module being loaded in this case?
> > >> > > > > >
> > >> > > > > > Please try adding the following in front of your call
to
> > >> METplus in
> > >> > > > your
> > >> > > > > > crontab:
> > >> > > > > > module use
/global/noscrub/Julie.Prestopnik/modulefiles;
> > >> module
> > >> > > load
> > >> > > > > > met/8.1; <fill in call to METplus here>
> > >> > > > > > and see if that works for you.
> > >> > > > > >
> > >> > > > > > Thanks,Julie
> > >> > > > > >
> > >> > > > > > On Tue Nov 19 09:26:10 2019, jpresto wrote:
> > >> > > > > > > I am getting these errors in running METplus in
cron that
> I
> > am
> > >> > not
> > >> > > > > > > getting while running interactively:
> > >> > > > > > >
> > >> > > > > > >
/global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc:
> > error
> > >> > while
> > >> > > > > > > loading shared libraries:
> > >> > > > > > > libpng16.so.16: cannot open shared object file: No
such
> file
> > >> or
> > >> > > > > > > directory
> > >> > > > > > >
/global/noscrub/Julie.Prestopnik/met/8.1_dev/bin/pb2nc:
> > error
> > >> > while
> > >> > > > > > > loading shared libraries:
> > >> > > > > > > libpng16.so.16: cannot open shared object file: No
such
> file
> > >> or
> > >> > > > > > > directory
> > >> > > > > > >
> > >> > > > > > > Can you suggest what I should be looking for to
correct
> > this?
> > >> > > Should
> > >> > > > > > > be a simple fix.
> > >> > > > > > >
> > >> > > > > > > Thanks!
> > >> > > > > > >
> > >> > > > > > > Perry
> > >> > > > > >
> > >> > > > > >
> > >> > > > > >
> > >> > > > > >
> > >> > > > >
> > >> > > > >
> > >> > > >
> > >> > > > --
> > >> > > > Julie Prestopnik
> > >> > > > Software Engineer
> > >> > > > National Center for Atmospheric Research
> > >> > > > Research Applications Laboratory
> > >> > > > Phone: 303.497.8399
> > >> > > > Email: jpresto at ucar.edu
> > >> > > >
> > >> > > > My working day may not be your working day. Please do
not feel
> > >> obliged
> > >> > > to
> > >> > > > reply to this email outside of your normal working hours.
> > >> > > >
> > >> > > >
> > >> > >
> > >> > >
> > >> >
> > >> > --
> > >> > Julie Prestopnik
> > >> > Software Engineer
> > >> > National Center for Atmospheric Research
> > >> > Research Applications Laboratory
> > >> > Phone: 303.497.8399
> > >> > Email: jpresto at ucar.edu
> > >> >
> > >> > My working day may not be your working day. Please do not
feel
> > obliged
> > >> to
> > >> > reply to this email outside of your normal working hours.
> > >> >
> > >> >
> > >>
> > >>
> > >
> > > --
> > > Julie Prestopnik
> > > Software Engineer
> > > National Center for Atmospheric Research
> > > Research Applications Laboratory
> > > Phone: 303.497.8399
> > > Email: jpresto at ucar.edu
> > >
> > > My working day may not be your working day. Please do not feel
obliged
> > to
> > > reply to this email outside of your normal working hours.
> > >
> >
> >
> > --
> > Julie Prestopnik
> > Software Engineer
> > National Center for Atmospheric Research
> > Research Applications Laboratory
> > Phone: 303.497.8399
> > Email: jpresto at ucar.edu
> >
> > My working day may not be your working day. Please do not feel
obliged
> to
> > reply to this email outside of your normal working hours.
> >
> >
>
>
--
Julie Prestopnik
Software Engineer
National Center for Atmospheric Research
Research Applications Laboratory
Phone: 303.497.8399
Email: jpresto at ucar.edu
My working day may not be your working day. Please do not feel
obliged to
reply to this email outside of your normal working hours.
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