[Met_help] [rt.rap.ucar.edu #82573] History for Batch Plotting with agg_stat - gsl error

[Tatiana Burek via RT]

----------------------------------------------------------------
  Initial Request
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Hi,

I modified my batch plotting script to do the aggregation method instead of
the summary method for computing statistics.  To do this, I commented out
the <calc_stat> code and added in the <agg_stat> code (new xml file is
attached).  However, when I try to execute the script I get the following
error:

13:27:06 INFO  Running '/usr/bin/Rscript
/usr1/metviewer/metviewer/R_work/include/agg_stat.R'
13:27:07 INFO
13:27:07 INFO  ==== Start Rscript error  ====
13:27:07 INFO  Error in library(gsl) : there is no package called ‘gsl’
13:27:07 INFO  Execution halted
13:27:07 INFO  ====   End Rscript error  ====

agg_stat.R cannot find the gsl library.  Do you know if it has to be
re-installed?

When this happens the batch script creates a plot but it looks the same as
the plot I made with the summary method (which is not what I want), and
they should be different, which I confirmed by re-creating the plot with
the GUI.

Thanks!
Ben


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  Complete Ticket History
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Subject: Batch Plotting with agg_stat - gsl error
From: Tatiana Burek
Time: Tue Oct 31 08:41:17 2017

Ben,

I had incorrect path to R libraries in the script. It is fixed now.
I rerun your XML and saved images in /usr1/metviewer/tmp directory.
Let me know if the plots are correct or still similar to images
produced with to the summary method.

Tatiana

On Tue Oct 31 07:48:01 2017, benjamin.blake at noaa.gov wrote:
> Hi,
>
> I modified my batch plotting script to do the aggregation method
instead of
> the summary method for computing statistics.  To do this, I
commented out
> the <calc_stat> code and added in the <agg_stat> code (new xml file
is
> attached).  However, when I try to execute the script I get the
following
> error:
>
> 13:27:06 INFO  Running '/usr/bin/Rscript
> /usr1/metviewer/metviewer/R_work/include/agg_stat.R'
> 13:27:07 INFO
> 13:27:07 INFO  ==== Start Rscript error  ====
> 13:27:07 INFO  Error in library(gsl) : there is no package called
‘gsl’
> 13:27:07 INFO  Execution halted
> 13:27:07 INFO  ====   End Rscript error  ====
>
> agg_stat.R cannot find the gsl library.  Do you know if it has to be
> re-installed?
>
> When this happens the batch script creates a plot but it looks the
same as
> the plot I made with the summary method (which is not what I want),
and
> they should be different, which I confirmed by re-creating the plot
with
> the GUI.
>
> Thanks!
> Ben



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Subject: Batch Plotting with agg_stat - gsl error
From: Benjamin Blake - NOAA Affiliate
Time: Tue Oct 31 08:56:49 2017

Hi Tatiana,

No problem, and yes the plots look correct now.  Thank you!

Ben

On Tue, Oct 31, 2017 at 10:41 AM, Tatiana Burek via RT
<met_help at ucar.edu>
wrote:

> Ben,
>
> I had incorrect path to R libraries in the script. It is fixed now.
> I rerun your XML and saved images in /usr1/metviewer/tmp directory.
> Let me know if the plots are correct or still similar to images
produced
> with to the summary method.
>
> Tatiana
>
> On Tue Oct 31 07:48:01 2017, benjamin.blake at noaa.gov wrote:
> > Hi,
> >
> > I modified my batch plotting script to do the aggregation method
instead
> of
> > the summary method for computing statistics.  To do this, I
commented out
> > the <calc_stat> code and added in the <agg_stat> code (new xml
file is
> > attached).  However, when I try to execute the script I get the
following
> > error:
> >
> > 13:27:06 INFO  Running '/usr/bin/Rscript
> > /usr1/metviewer/metviewer/R_work/include/agg_stat.R'
> > 13:27:07 INFO
> > 13:27:07 INFO  ==== Start Rscript error  ====
> > 13:27:07 INFO  Error in library(gsl) : there is no package called
‘gsl’
> > 13:27:07 INFO  Execution halted
> > 13:27:07 INFO  ====   End Rscript error  ====
> >
> > agg_stat.R cannot find the gsl library.  Do you know if it has to
be
> > re-installed?
> >
> > When this happens the batch script creates a plot but it looks the
same
> as
> > the plot I made with the summary method (which is not what I
want), and
> > they should be different, which I confirmed by re-creating the
plot with
> > the GUI.
> >
> > Thanks!
> > Ben
>
>
>
>

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