[Met_help] [rt.rap.ucar.edu #80419] History for MET make failed
Julie Prestopnik via RT
met_help at ucar.edu
Fri May 12 13:02:09 MDT 2017
----------------------------------------------------------------
Initial Request
----------------------------------------------------------------
Hi,
I received error messages in attempting to make MET (please see below). Would you please give me some suggestions?
I'm looking forward to hearing from you!
zzheng25 at ThinkCentre-M700:~/local/met-6.0$ make install >& make_install.log &
[1] 19009
zzheng25 at ThinkCentre-M700:~/local/met-6.0$ tail -f make_install.log
make[3]: *** [install-recursive] Error 1
make[3]: Leaving directory '/home/zzheng25/local/met-6.0/src/tools/other'
Makefile:357: recipe for target 'install-recursive' failed
make[2]: *** [install-recursive] Error 1
make[2]: Leaving directory '/home/zzheng25/local/met-6.0/src/tools'
Makefile:354: recipe for target 'install-recursive' failed
make[1]: *** [install-recursive] Error 1
make[1]: Leaving directory '/home/zzheng25/local/met-6.0/src'
Makefile:410: recipe for target 'install-recursive' failed
make: *** [install-recursive] Error 1
Sincerely,
Zhonghua
---------------------------------------------------
Zhonghua Zheng
Ph.D. Student, Air Quality Engineering
Department of Civil and Environmental Engineering (CEE)
University of Illinois at Urbana-Champaign (UIUC)
----------------------------------------------------------------
Complete Ticket History
----------------------------------------------------------------
Subject: MET make failed
From: Julie Prestopnik
Time: Thu May 11 09:26:08 2017
Hello Zhonghua. Thank you for your interest in MET. I'm sorry to see
that
you are having problems installing MET. Unfortunately, there is not
enough
information listed from "tail -f make_install.log" to help us figure
out
what the problem is.
Could you please attach your config.log file and your make_install.log
file
so that we can take a look and help determine what the problem is?
Thanks!
Julie
On Thu, May 11, 2017 at 12:00 AM, Zheng, Zhonghua via RT
<met_help at ucar.edu>
wrote:
>
> Thu May 11 00:00:22 2017: Request 80419 was acted upon.
> Transaction: Ticket created by zzheng25 at illinois.edu
> Queue: met_help
> Subject: MET make failed
> Owner: Nobody
> Requestors: zzheng25 at illinois.edu
> Status: new
> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
>
>
> Hi,
>
> I received error messages in attempting to make MET (please see
below).
> Would you please give me some suggestions?
> I'm looking forward to hearing from you!
>
>
> zzheng25 at ThinkCentre-M700:~/local/met-6.0$ make install >&
> make_install.log &
>
> [1] 19009
>
> zzheng25 at ThinkCentre-M700:~/local/met-6.0$ tail -f make_install.log
>
> make[3]: *** [install-recursive] Error 1
>
> make[3]: Leaving directory '/home/zzheng25/local/met-
6.0/src/tools/other'
>
> Makefile:357: recipe for target 'install-recursive' failed
>
> make[2]: *** [install-recursive] Error 1
>
> make[2]: Leaving directory '/home/zzheng25/local/met-6.0/src/tools'
>
> Makefile:354: recipe for target 'install-recursive' failed
>
> make[1]: *** [install-recursive] Error 1
>
> make[1]: Leaving directory '/home/zzheng25/local/met-6.0/src'
>
> Makefile:410: recipe for target 'install-recursive' failed
>
> make: *** [install-recursive] Error 1
>
>
> Sincerely,
> Zhonghua
> ---------------------------------------------------
> Zhonghua Zheng
> Ph.D. Student, Air Quality Engineering
> Department of Civil and Environmental Engineering (CEE)
> University of Illinois at Urbana-Champaign (UIUC)
>
>
------------------------------------------------
Subject: MET make failed
From: Zheng, Zhonghua
Time: Thu May 11 11:44:37 2017
Dear Julie,
Thank you for your prompt reply. Attached are my installation manual
for MET 6.0, config.log file, and make_install.log file. I have
installed Netcdf successfully.
I'm looking forward to hearing from you!
Sincerely,
Zhonghua
---------------------------------------------------
Zhonghua Zheng
Ph.D. Student, Air Quality Engineering
Department of Civil and Environmental Engineering (CEE)
University of Illinois at Urbana-Champaign (UIUC)
________________________________________
From: Julie Prestopnik via RT [met_help at ucar.edu]
Sent: Thursday, May 11, 2017 10:26 AM
To: Zheng, Zhonghua
Subject: Re: [rt.rap.ucar.edu #80419] MET make failed
Hello Zhonghua. Thank you for your interest in MET. I'm sorry to see
that
you are having problems installing MET. Unfortunately, there is not
enough
information listed from "tail -f make_install.log" to help us figure
out
what the problem is.
Could you please attach your config.log file and your make_install.log
file
so that we can take a look and help determine what the problem is?
Thanks!
Julie
On Thu, May 11, 2017 at 12:00 AM, Zheng, Zhonghua via RT
<met_help at ucar.edu>
wrote:
>
> Thu May 11 00:00:22 2017: Request 80419 was acted upon.
> Transaction: Ticket created by zzheng25 at illinois.edu
> Queue: met_help
> Subject: MET make failed
> Owner: Nobody
> Requestors: zzheng25 at illinois.edu
> Status: new
> Ticket <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419
>
>
>
> Hi,
>
> I received error messages in attempting to make MET (please see
below).
> Would you please give me some suggestions?
> I'm looking forward to hearing from you!
>
>
> zzheng25 at ThinkCentre-M700:~/local/met-6.0$ make install >&
> make_install.log &
>
> [1] 19009
>
> zzheng25 at ThinkCentre-M700:~/local/met-6.0$ tail -f make_install.log
>
> make[3]: *** [install-recursive] Error 1
>
> make[3]: Leaving directory '/home/zzheng25/local/met-
6.0/src/tools/other'
>
> Makefile:357: recipe for target 'install-recursive' failed
>
> make[2]: *** [install-recursive] Error 1
>
> make[2]: Leaving directory '/home/zzheng25/local/met-6.0/src/tools'
>
> Makefile:354: recipe for target 'install-recursive' failed
>
> make[1]: *** [install-recursive] Error 1
>
> make[1]: Leaving directory '/home/zzheng25/local/met-6.0/src'
>
> Makefile:410: recipe for target 'install-recursive' failed
>
> make: *** [install-recursive] Error 1
>
>
> Sincerely,
> Zhonghua
> ---------------------------------------------------
> Zhonghua Zheng
> Ph.D. Student, Air Quality Engineering
> Department of Civil and Environmental Engineering (CEE)
> University of Illinois at Urbana-Champaign (UIUC)
>
>
------------------------------------------------
Subject: MET make failed
From: Julie Prestopnik
Time: Thu May 11 11:57:10 2017
Thank you for attaching all of the files.
I see the following error in make_install.log:
/usr/bin/ld: cannot find -lbufr
MET cannot find BUFRLIB. I see that you have set:
MET_BUFR='/home/zzheng25/local/libbufr.a'
MET_BUFRLIB='${MET_BUFR}/lib'
Only MET_BUFR *or* MET_BUFRLIB should be set. If libbufr.a is located
at
/home/zzheng25/local/, please only set
MET_BUFRLIB='/home/zzheng25/local/'
Please note that we do not want to provide the filename libbufr.a, but
only
the directory in which that file resides. Please unset the
environment
variable MET_BUFR and then set MET_BUFRLIB='/home/zzheng25/local/'.
Then,
please run "make clean", reconfigure MET, and try to re-install.
Hopefully, that will resolve the problem you are seeing.
Please let us know how it goes.
Thanks,
Julie
On Thu, May 11, 2017 at 11:44 AM, Zheng, Zhonghua via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
>
> Dear Julie,
>
> Thank you for your prompt reply. Attached are my installation manual
for
> MET 6.0, config.log file, and make_install.log file. I have
installed
> Netcdf successfully.
>
> I'm looking forward to hearing from you!
>
> Sincerely,
> Zhonghua
> ---------------------------------------------------
> Zhonghua Zheng
> Ph.D. Student, Air Quality Engineering
> Department of Civil and Environmental Engineering (CEE)
> University of Illinois at Urbana-Champaign (UIUC)
>
> ________________________________________
> From: Julie Prestopnik via RT [met_help at ucar.edu]
> Sent: Thursday, May 11, 2017 10:26 AM
> To: Zheng, Zhonghua
> Subject: Re: [rt.rap.ucar.edu #80419] MET make failed
>
> Hello Zhonghua. Thank you for your interest in MET. I'm sorry to see
that
> you are having problems installing MET. Unfortunately, there is not
enough
> information listed from "tail -f make_install.log" to help us figure
out
> what the problem is.
>
> Could you please attach your config.log file and your
make_install.log file
> so that we can take a look and help determine what the problem is?
>
> Thanks!
>
> Julie
>
> On Thu, May 11, 2017 at 12:00 AM, Zheng, Zhonghua via RT <
> met_help at ucar.edu>
> wrote:
>
> >
> > Thu May 11 00:00:22 2017: Request 80419 was acted upon.
> > Transaction: Ticket created by zzheng25 at illinois.edu
> > Queue: met_help
> > Subject: MET make failed
> > Owner: Nobody
> > Requestors: zzheng25 at illinois.edu
> > Status: new
> > Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
> >
> >
> > Hi,
> >
> > I received error messages in attempting to make MET (please see
below).
> > Would you please give me some suggestions?
> > I'm looking forward to hearing from you!
> >
> >
> > zzheng25 at ThinkCentre-M700:~/local/met-6.0$ make install >&
> > make_install.log &
> >
> > [1] 19009
> >
> > zzheng25 at ThinkCentre-M700:~/local/met-6.0$ tail -f
make_install.log
> >
> > make[3]: *** [install-recursive] Error 1
> >
> > make[3]: Leaving directory '/home/zzheng25/local/met-6.0/
> src/tools/other'
> >
> > Makefile:357: recipe for target 'install-recursive' failed
> >
> > make[2]: *** [install-recursive] Error 1
> >
> > make[2]: Leaving directory '/home/zzheng25/local/met-
6.0/src/tools'
> >
> > Makefile:354: recipe for target 'install-recursive' failed
> >
> > make[1]: *** [install-recursive] Error 1
> >
> > make[1]: Leaving directory '/home/zzheng25/local/met-6.0/src'
> >
> > Makefile:410: recipe for target 'install-recursive' failed
> >
> > make: *** [install-recursive] Error 1
> >
> >
> > Sincerely,
> > Zhonghua
> > ---------------------------------------------------
> > Zhonghua Zheng
> > Ph.D. Student, Air Quality Engineering
> > Department of Civil and Environmental Engineering (CEE)
> > University of Illinois at Urbana-Champaign (UIUC)
> >
> >
>
>
>
------------------------------------------------
Subject: MET make failed
From: Zheng, Zhonghua
Time: Thu May 11 13:36:07 2017
Dear Julie,
Thank you for your help. However, I still can see the "error" in the
config.log file. Also, I cannot find "*** Finished Testing the Model
Evaluation Tools Project ***" in make_test.log. I don't know if I have
successfully installed it, because I found many "DEBUG" in
make_test.log file. Would you please give me some suggestions?
But the good news is that I didn't find any error in make_install.log
at this point
I'm looking forward to hearing from you!
Sincerely,
Zhonghua
---------------------------------------------------
Zhonghua Zheng
Ph.D. Student, Air Quality Engineering
Department of Civil and Environmental Engineering (CEE)
University of Illinois at Urbana-Champaign (UIUC)
________________________________________
From: Julie Prestopnik via RT [met_help at ucar.edu]
Sent: Thursday, May 11, 2017 12:57 PM
To: Zheng, Zhonghua
Subject: Re: [rt.rap.ucar.edu #80419] MET make failed
Thank you for attaching all of the files.
I see the following error in make_install.log:
/usr/bin/ld: cannot find -lbufr
MET cannot find BUFRLIB. I see that you have set:
MET_BUFR='/home/zzheng25/local/libbufr.a'
MET_BUFRLIB='${MET_BUFR}/lib'
Only MET_BUFR *or* MET_BUFRLIB should be set. If libbufr.a is located
at
/home/zzheng25/local/, please only set
MET_BUFRLIB='/home/zzheng25/local/'
Please note that we do not want to provide the filename libbufr.a, but
only
the directory in which that file resides. Please unset the environment
variable MET_BUFR and then set MET_BUFRLIB='/home/zzheng25/local/'.
Then,
please run "make clean", reconfigure MET, and try to re-install.
Hopefully, that will resolve the problem you are seeing.
Please let us know how it goes.
Thanks,
Julie
On Thu, May 11, 2017 at 11:44 AM, Zheng, Zhonghua via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
>
> Dear Julie,
>
> Thank you for your prompt reply. Attached are my installation manual
for
> MET 6.0, config.log file, and make_install.log file. I have
installed
> Netcdf successfully.
>
> I'm looking forward to hearing from you!
>
> Sincerely,
> Zhonghua
> ---------------------------------------------------
> Zhonghua Zheng
> Ph.D. Student, Air Quality Engineering
> Department of Civil and Environmental Engineering (CEE)
> University of Illinois at Urbana-Champaign (UIUC)
>
> ________________________________________
> From: Julie Prestopnik via RT [met_help at ucar.edu]
> Sent: Thursday, May 11, 2017 10:26 AM
> To: Zheng, Zhonghua
> Subject: Re: [rt.rap.ucar.edu #80419] MET make failed
>
> Hello Zhonghua. Thank you for your interest in MET. I'm sorry to see
that
> you are having problems installing MET. Unfortunately, there is not
enough
> information listed from "tail -f make_install.log" to help us figure
out
> what the problem is.
>
> Could you please attach your config.log file and your
make_install.log file
> so that we can take a look and help determine what the problem is?
>
> Thanks!
>
> Julie
>
> On Thu, May 11, 2017 at 12:00 AM, Zheng, Zhonghua via RT <
> met_help at ucar.edu>
> wrote:
>
> >
> > Thu May 11 00:00:22 2017: Request 80419 was acted upon.
> > Transaction: Ticket created by zzheng25 at illinois.edu
> > Queue: met_help
> > Subject: MET make failed
> > Owner: Nobody
> > Requestors: zzheng25 at illinois.edu
> > Status: new
> > Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
> >
> >
> > Hi,
> >
> > I received error messages in attempting to make MET (please see
below).
> > Would you please give me some suggestions?
> > I'm looking forward to hearing from you!
> >
> >
> > zzheng25 at ThinkCentre-M700:~/local/met-6.0$ make install >&
> > make_install.log &
> >
> > [1] 19009
> >
> > zzheng25 at ThinkCentre-M700:~/local/met-6.0$ tail -f
make_install.log
> >
> > make[3]: *** [install-recursive] Error 1
> >
> > make[3]: Leaving directory '/home/zzheng25/local/met-6.0/
> src/tools/other'
> >
> > Makefile:357: recipe for target 'install-recursive' failed
> >
> > make[2]: *** [install-recursive] Error 1
> >
> > make[2]: Leaving directory '/home/zzheng25/local/met-
6.0/src/tools'
> >
> > Makefile:354: recipe for target 'install-recursive' failed
> >
> > make[1]: *** [install-recursive] Error 1
> >
> > make[1]: Leaving directory '/home/zzheng25/local/met-6.0/src'
> >
> > Makefile:410: recipe for target 'install-recursive' failed
> >
> > make: *** [install-recursive] Error 1
> >
> >
> > Sincerely,
> > Zhonghua
> > ---------------------------------------------------
> > Zhonghua Zheng
> > Ph.D. Student, Air Quality Engineering
> > Department of Civil and Environmental Engineering (CEE)
> > University of Illinois at Urbana-Champaign (UIUC)
> >
> >
>
>
>
------------------------------------------------
Subject: MET make failed
From: Julie Prestopnik
Time: Thu May 11 13:55:13 2017
Hi Zhonghua.
I do believe you have a successful installation of MET, however, I
would
like to make sure that you have the latest version of met-6.0
including the
bugfixes since the release. I am wondering about this since you do
not
have "*** Finished Testing the Model Evaluation Tools Project ***" in
your
make_test.log. When we first released met-6.0, that message was
missing
from the end of the tests. However, STAT-Analysis is the last test
that is
run, and it appears to have run successfully for you. When we
released the
patches, that message was included in the tests, so I suspect you are
missing the patches. There was a significant bugfix in the patches, so
I
would suggest that you get and install those as well.
You can download the patch file (met-6.0_patches_20170419.tar.gz
<http://www.dtcenter.org/met/users/support/known_issues/METv6.0/patches/met-
6.0_patches_20170419.tar.gz>)
from this location
http://www.dtcenter.org/met/users/support/known_issues/METv6.0/index.php
Copy it into your top level met-6.0 directory. Then, run "make
clean",
reconfigure and reinstall MET. After that, you should be able to
rerun the
tests and should see the "*** Finished Testing the Model Evaluation
Tools
Project ***" message in your make_test.log file.
Please let us know how that goes.
On Thu, May 11, 2017 at 1:36 PM, Zheng, Zhonghua via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
>
> Dear Julie,
>
> Thank you for your help. However, I still can see the "error" in the
> config.log file. Also, I cannot find "*** Finished Testing the Model
> Evaluation Tools Project ***" in make_test.log. I don't know if I
have
> successfully installed it, because I found many "DEBUG" in
make_test.log
> file. Would you please give me some suggestions?
>
> But the good news is that I didn't find any error in
make_install.log at
> this point
>
> I'm looking forward to hearing from you!
>
> Sincerely,
> Zhonghua
> ---------------------------------------------------
> Zhonghua Zheng
> Ph.D. Student, Air Quality Engineering
> Department of Civil and Environmental Engineering (CEE)
> University of Illinois at Urbana-Champaign (UIUC)
>
> ________________________________________
> From: Julie Prestopnik via RT [met_help at ucar.edu]
> Sent: Thursday, May 11, 2017 12:57 PM
> To: Zheng, Zhonghua
> Subject: Re: [rt.rap.ucar.edu #80419] MET make failed
>
> Thank you for attaching all of the files.
>
> I see the following error in make_install.log:
>
> /usr/bin/ld: cannot find -lbufr
>
> MET cannot find BUFRLIB. I see that you have set:
>
> MET_BUFR='/home/zzheng25/local/libbufr.a'
> MET_BUFRLIB='${MET_BUFR}/lib'
>
> Only MET_BUFR *or* MET_BUFRLIB should be set. If libbufr.a is
located at
> /home/zzheng25/local/, please only set
>
> MET_BUFRLIB='/home/zzheng25/local/'
>
> Please note that we do not want to provide the filename libbufr.a,
but only
> the directory in which that file resides. Please unset the
environment
> variable MET_BUFR and then set MET_BUFRLIB='/home/zzheng25/local/'.
Then,
> please run "make clean", reconfigure MET, and try to re-install.
> Hopefully, that will resolve the problem you are seeing.
>
> Please let us know how it goes.
>
> Thanks,
> Julie
>
>
> On Thu, May 11, 2017 at 11:44 AM, Zheng, Zhonghua via RT <
> met_help at ucar.edu>
> wrote:
>
> >
> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
> >
> > Dear Julie,
> >
> > Thank you for your prompt reply. Attached are my installation
manual for
> > MET 6.0, config.log file, and make_install.log file. I have
installed
> > Netcdf successfully.
> >
> > I'm looking forward to hearing from you!
> >
> > Sincerely,
> > Zhonghua
> > ---------------------------------------------------
> > Zhonghua Zheng
> > Ph.D. Student, Air Quality Engineering
> > Department of Civil and Environmental Engineering (CEE)
> > University of Illinois at Urbana-Champaign (UIUC)
> >
> > ________________________________________
> > From: Julie Prestopnik via RT [met_help at ucar.edu]
> > Sent: Thursday, May 11, 2017 10:26 AM
> > To: Zheng, Zhonghua
> > Subject: Re: [rt.rap.ucar.edu #80419] MET make failed
> >
> > Hello Zhonghua. Thank you for your interest in MET. I'm sorry to
see that
> > you are having problems installing MET. Unfortunately, there is
not
> enough
> > information listed from "tail -f make_install.log" to help us
figure out
> > what the problem is.
> >
> > Could you please attach your config.log file and your
make_install.log
> file
> > so that we can take a look and help determine what the problem is?
> >
> > Thanks!
> >
> > Julie
> >
> > On Thu, May 11, 2017 at 12:00 AM, Zheng, Zhonghua via RT <
> > met_help at ucar.edu>
> > wrote:
> >
> > >
> > > Thu May 11 00:00:22 2017: Request 80419 was acted upon.
> > > Transaction: Ticket created by zzheng25 at illinois.edu
> > > Queue: met_help
> > > Subject: MET make failed
> > > Owner: Nobody
> > > Requestors: zzheng25 at illinois.edu
> > > Status: new
> > > Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
> > >
> > >
> > > Hi,
> > >
> > > I received error messages in attempting to make MET (please see
below).
> > > Would you please give me some suggestions?
> > > I'm looking forward to hearing from you!
> > >
> > >
> > > zzheng25 at ThinkCentre-M700:~/local/met-6.0$ make install >&
> > > make_install.log &
> > >
> > > [1] 19009
> > >
> > > zzheng25 at ThinkCentre-M700:~/local/met-6.0$ tail -f
make_install.log
> > >
> > > make[3]: *** [install-recursive] Error 1
> > >
> > > make[3]: Leaving directory '/home/zzheng25/local/met-6.0/
> > src/tools/other'
> > >
> > > Makefile:357: recipe for target 'install-recursive' failed
> > >
> > > make[2]: *** [install-recursive] Error 1
> > >
> > > make[2]: Leaving directory '/home/zzheng25/local/met-
6.0/src/tools'
> > >
> > > Makefile:354: recipe for target 'install-recursive' failed
> > >
> > > make[1]: *** [install-recursive] Error 1
> > >
> > > make[1]: Leaving directory '/home/zzheng25/local/met-6.0/src'
> > >
> > > Makefile:410: recipe for target 'install-recursive' failed
> > >
> > > make: *** [install-recursive] Error 1
> > >
> > >
> > > Sincerely,
> > > Zhonghua
> > > ---------------------------------------------------
> > > Zhonghua Zheng
> > > Ph.D. Student, Air Quality Engineering
> > > Department of Civil and Environmental Engineering (CEE)
> > > University of Illinois at Urbana-Champaign (UIUC)
> > >
> > >
> >
> >
> >
>
>
------------------------------------------------
Subject: MET make failed
From: Zheng, Zhonghua
Time: Thu May 11 14:32:18 2017
Dear Julie,
Thank you for your time! Now I install the patches as you suggested
and it works now. Very cool.
But there is a little concern about the error in config.log. It seems
it doesn't matter at this point.
I really appreciate your help.
Sincerely,
Zhonghua
---------------------------------------------------
Zhonghua Zheng
Ph.D. Student, Air Quality Engineering
Department of Civil and Environmental Engineering (CEE)
University of Illinois at Urbana-Champaign (UIUC)
________________________________________
From: Julie Prestopnik via RT [met_help at ucar.edu]
Sent: Thursday, May 11, 2017 2:55 PM
To: Zheng, Zhonghua
Subject: Re: [rt.rap.ucar.edu #80419] MET make failed
Hi Zhonghua.
I do believe you have a successful installation of MET, however, I
would
like to make sure that you have the latest version of met-6.0
including the
bugfixes since the release. I am wondering about this since you do not
have "*** Finished Testing the Model Evaluation Tools Project ***" in
your
make_test.log. When we first released met-6.0, that message was
missing
from the end of the tests. However, STAT-Analysis is the last test
that is
run, and it appears to have run successfully for you. When we released
the
patches, that message was included in the tests, so I suspect you are
missing the patches. There was a significant bugfix in the patches, so
I
would suggest that you get and install those as well.
You can download the patch file (met-6.0_patches_20170419.tar.gz
<http://www.dtcenter.org/met/users/support/known_issues/METv6.0/patches/met-
6.0_patches_20170419.tar.gz>)
from this location
http://www.dtcenter.org/met/users/support/known_issues/METv6.0/index.php
Copy it into your top level met-6.0 directory. Then, run "make clean",
reconfigure and reinstall MET. After that, you should be able to rerun
the
tests and should see the "*** Finished Testing the Model Evaluation
Tools
Project ***" message in your make_test.log file.
Please let us know how that goes.
On Thu, May 11, 2017 at 1:36 PM, Zheng, Zhonghua via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
>
> Dear Julie,
>
> Thank you for your help. However, I still can see the "error" in the
> config.log file. Also, I cannot find "*** Finished Testing the Model
> Evaluation Tools Project ***" in make_test.log. I don't know if I
have
> successfully installed it, because I found many "DEBUG" in
make_test.log
> file. Would you please give me some suggestions?
>
> But the good news is that I didn't find any error in
make_install.log at
> this point
>
> I'm looking forward to hearing from you!
>
> Sincerely,
> Zhonghua
> ---------------------------------------------------
> Zhonghua Zheng
> Ph.D. Student, Air Quality Engineering
> Department of Civil and Environmental Engineering (CEE)
> University of Illinois at Urbana-Champaign (UIUC)
>
> ________________________________________
> From: Julie Prestopnik via RT [met_help at ucar.edu]
> Sent: Thursday, May 11, 2017 12:57 PM
> To: Zheng, Zhonghua
> Subject: Re: [rt.rap.ucar.edu #80419] MET make failed
>
> Thank you for attaching all of the files.
>
> I see the following error in make_install.log:
>
> /usr/bin/ld: cannot find -lbufr
>
> MET cannot find BUFRLIB. I see that you have set:
>
> MET_BUFR='/home/zzheng25/local/libbufr.a'
> MET_BUFRLIB='${MET_BUFR}/lib'
>
> Only MET_BUFR *or* MET_BUFRLIB should be set. If libbufr.a is
located at
> /home/zzheng25/local/, please only set
>
> MET_BUFRLIB='/home/zzheng25/local/'
>
> Please note that we do not want to provide the filename libbufr.a,
but only
> the directory in which that file resides. Please unset the
environment
> variable MET_BUFR and then set MET_BUFRLIB='/home/zzheng25/local/'.
Then,
> please run "make clean", reconfigure MET, and try to re-install.
> Hopefully, that will resolve the problem you are seeing.
>
> Please let us know how it goes.
>
> Thanks,
> Julie
>
>
> On Thu, May 11, 2017 at 11:44 AM, Zheng, Zhonghua via RT <
> met_help at ucar.edu>
> wrote:
>
> >
> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
> >
> > Dear Julie,
> >
> > Thank you for your prompt reply. Attached are my installation
manual for
> > MET 6.0, config.log file, and make_install.log file. I have
installed
> > Netcdf successfully.
> >
> > I'm looking forward to hearing from you!
> >
> > Sincerely,
> > Zhonghua
> > ---------------------------------------------------
> > Zhonghua Zheng
> > Ph.D. Student, Air Quality Engineering
> > Department of Civil and Environmental Engineering (CEE)
> > University of Illinois at Urbana-Champaign (UIUC)
> >
> > ________________________________________
> > From: Julie Prestopnik via RT [met_help at ucar.edu]
> > Sent: Thursday, May 11, 2017 10:26 AM
> > To: Zheng, Zhonghua
> > Subject: Re: [rt.rap.ucar.edu #80419] MET make failed
> >
> > Hello Zhonghua. Thank you for your interest in MET. I'm sorry to
see that
> > you are having problems installing MET. Unfortunately, there is
not
> enough
> > information listed from "tail -f make_install.log" to help us
figure out
> > what the problem is.
> >
> > Could you please attach your config.log file and your
make_install.log
> file
> > so that we can take a look and help determine what the problem is?
> >
> > Thanks!
> >
> > Julie
> >
> > On Thu, May 11, 2017 at 12:00 AM, Zheng, Zhonghua via RT <
> > met_help at ucar.edu>
> > wrote:
> >
> > >
> > > Thu May 11 00:00:22 2017: Request 80419 was acted upon.
> > > Transaction: Ticket created by zzheng25 at illinois.edu
> > > Queue: met_help
> > > Subject: MET make failed
> > > Owner: Nobody
> > > Requestors: zzheng25 at illinois.edu
> > > Status: new
> > > Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
> > >
> > >
> > > Hi,
> > >
> > > I received error messages in attempting to make MET (please see
below).
> > > Would you please give me some suggestions?
> > > I'm looking forward to hearing from you!
> > >
> > >
> > > zzheng25 at ThinkCentre-M700:~/local/met-6.0$ make install >&
> > > make_install.log &
> > >
> > > [1] 19009
> > >
> > > zzheng25 at ThinkCentre-M700:~/local/met-6.0$ tail -f
make_install.log
> > >
> > > make[3]: *** [install-recursive] Error 1
> > >
> > > make[3]: Leaving directory '/home/zzheng25/local/met-6.0/
> > src/tools/other'
> > >
> > > Makefile:357: recipe for target 'install-recursive' failed
> > >
> > > make[2]: *** [install-recursive] Error 1
> > >
> > > make[2]: Leaving directory '/home/zzheng25/local/met-
6.0/src/tools'
> > >
> > > Makefile:354: recipe for target 'install-recursive' failed
> > >
> > > make[1]: *** [install-recursive] Error 1
> > >
> > > make[1]: Leaving directory '/home/zzheng25/local/met-6.0/src'
> > >
> > > Makefile:410: recipe for target 'install-recursive' failed
> > >
> > > make: *** [install-recursive] Error 1
> > >
> > >
> > > Sincerely,
> > > Zhonghua
> > > ---------------------------------------------------
> > > Zhonghua Zheng
> > > Ph.D. Student, Air Quality Engineering
> > > Department of Civil and Environmental Engineering (CEE)
> > > University of Illinois at Urbana-Champaign (UIUC)
> > >
> > >
> >
> >
> >
>
>
------------------------------------------------
Subject: MET make failed
From: Julie Prestopnik
Time: Thu May 11 15:18:28 2017
You're very welcome. Yes, I believe we can safely ignore the errors
in the
config.log file. I'll go ahead and close this ticket. Please feel
free to
start a new ticket if you have any other questions.
Thanks,
Julie
On Thu, May 11, 2017 at 2:32 PM, Zheng, Zhonghua via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
>
> Dear Julie,
>
> Thank you for your time! Now I install the patches as you suggested
and it
> works now. Very cool.
> But there is a little concern about the error in config.log. It
seems it
> doesn't matter at this point.
>
> I really appreciate your help.
>
> Sincerely,
> Zhonghua
> ---------------------------------------------------
> Zhonghua Zheng
> Ph.D. Student, Air Quality Engineering
> Department of Civil and Environmental Engineering (CEE)
> University of Illinois at Urbana-Champaign (UIUC)
>
> ________________________________________
> From: Julie Prestopnik via RT [met_help at ucar.edu]
> Sent: Thursday, May 11, 2017 2:55 PM
> To: Zheng, Zhonghua
> Subject: Re: [rt.rap.ucar.edu #80419] MET make failed
>
> Hi Zhonghua.
>
> I do believe you have a successful installation of MET, however, I
would
> like to make sure that you have the latest version of met-6.0
including the
> bugfixes since the release. I am wondering about this since you do
not
> have "*** Finished Testing the Model Evaluation Tools Project ***"
in your
> make_test.log. When we first released met-6.0, that message was
missing
> from the end of the tests. However, STAT-Analysis is the last test
that is
> run, and it appears to have run successfully for you. When we
released the
> patches, that message was included in the tests, so I suspect you
are
> missing the patches. There was a significant bugfix in the patches,
so I
> would suggest that you get and install those as well.
>
> You can download the patch file (met-6.0_patches_20170419.tar.gz
> <http://www.dtcenter.org/met/users/support/known_issues/
> METv6.0/patches/met-6.0_patches_20170419.tar.gz>)
> from this location
>
http://www.dtcenter.org/met/users/support/known_issues/METv6.0/index.php
>
> Copy it into your top level met-6.0 directory. Then, run "make
clean",
> reconfigure and reinstall MET. After that, you should be able to
rerun the
> tests and should see the "*** Finished Testing the Model Evaluation
Tools
> Project ***" message in your make_test.log file.
>
> Please let us know how that goes.
>
>
>
>
>
> On Thu, May 11, 2017 at 1:36 PM, Zheng, Zhonghua via RT
<met_help at ucar.edu
> >
> wrote:
>
> >
> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
> >
> > Dear Julie,
> >
> > Thank you for your help. However, I still can see the "error" in
the
> > config.log file. Also, I cannot find "*** Finished Testing the
Model
> > Evaluation Tools Project ***" in make_test.log. I don't know if I
have
> > successfully installed it, because I found many "DEBUG" in
make_test.log
> > file. Would you please give me some suggestions?
> >
> > But the good news is that I didn't find any error in
make_install.log at
> > this point
> >
> > I'm looking forward to hearing from you!
> >
> > Sincerely,
> > Zhonghua
> > ---------------------------------------------------
> > Zhonghua Zheng
> > Ph.D. Student, Air Quality Engineering
> > Department of Civil and Environmental Engineering (CEE)
> > University of Illinois at Urbana-Champaign (UIUC)
> >
> > ________________________________________
> > From: Julie Prestopnik via RT [met_help at ucar.edu]
> > Sent: Thursday, May 11, 2017 12:57 PM
> > To: Zheng, Zhonghua
> > Subject: Re: [rt.rap.ucar.edu #80419] MET make failed
> >
> > Thank you for attaching all of the files.
> >
> > I see the following error in make_install.log:
> >
> > /usr/bin/ld: cannot find -lbufr
> >
> > MET cannot find BUFRLIB. I see that you have set:
> >
> > MET_BUFR='/home/zzheng25/local/libbufr.a'
> > MET_BUFRLIB='${MET_BUFR}/lib'
> >
> > Only MET_BUFR *or* MET_BUFRLIB should be set. If libbufr.a is
located at
> > /home/zzheng25/local/, please only set
> >
> > MET_BUFRLIB='/home/zzheng25/local/'
> >
> > Please note that we do not want to provide the filename libbufr.a,
but
> only
> > the directory in which that file resides. Please unset the
environment
> > variable MET_BUFR and then set
MET_BUFRLIB='/home/zzheng25/local/'.
> Then,
> > please run "make clean", reconfigure MET, and try to re-install.
> > Hopefully, that will resolve the problem you are seeing.
> >
> > Please let us know how it goes.
> >
> > Thanks,
> > Julie
> >
> >
> > On Thu, May 11, 2017 at 11:44 AM, Zheng, Zhonghua via RT <
> > met_help at ucar.edu>
> > wrote:
> >
> > >
> > > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
> > >
> > > Dear Julie,
> > >
> > > Thank you for your prompt reply. Attached are my installation
manual
> for
> > > MET 6.0, config.log file, and make_install.log file. I have
installed
> > > Netcdf successfully.
> > >
> > > I'm looking forward to hearing from you!
> > >
> > > Sincerely,
> > > Zhonghua
> > > ---------------------------------------------------
> > > Zhonghua Zheng
> > > Ph.D. Student, Air Quality Engineering
> > > Department of Civil and Environmental Engineering (CEE)
> > > University of Illinois at Urbana-Champaign (UIUC)
> > >
> > > ________________________________________
> > > From: Julie Prestopnik via RT [met_help at ucar.edu]
> > > Sent: Thursday, May 11, 2017 10:26 AM
> > > To: Zheng, Zhonghua
> > > Subject: Re: [rt.rap.ucar.edu #80419] MET make failed
> > >
> > > Hello Zhonghua. Thank you for your interest in MET. I'm sorry to
see
> that
> > > you are having problems installing MET. Unfortunately, there is
not
> > enough
> > > information listed from "tail -f make_install.log" to help us
figure
> out
> > > what the problem is.
> > >
> > > Could you please attach your config.log file and your
make_install.log
> > file
> > > so that we can take a look and help determine what the problem
is?
> > >
> > > Thanks!
> > >
> > > Julie
> > >
> > > On Thu, May 11, 2017 at 12:00 AM, Zheng, Zhonghua via RT <
> > > met_help at ucar.edu>
> > > wrote:
> > >
> > > >
> > > > Thu May 11 00:00:22 2017: Request 80419 was acted upon.
> > > > Transaction: Ticket created by zzheng25 at illinois.edu
> > > > Queue: met_help
> > > > Subject: MET make failed
> > > > Owner: Nobody
> > > > Requestors: zzheng25 at illinois.edu
> > > > Status: new
> > > > Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419
> >
> > > >
> > > >
> > > > Hi,
> > > >
> > > > I received error messages in attempting to make MET (please
see
> below).
> > > > Would you please give me some suggestions?
> > > > I'm looking forward to hearing from you!
> > > >
> > > >
> > > > zzheng25 at ThinkCentre-M700:~/local/met-6.0$ make install >&
> > > > make_install.log &
> > > >
> > > > [1] 19009
> > > >
> > > > zzheng25 at ThinkCentre-M700:~/local/met-6.0$ tail -f
make_install.log
> > > >
> > > > make[3]: *** [install-recursive] Error 1
> > > >
> > > > make[3]: Leaving directory '/home/zzheng25/local/met-6.0/
> > > src/tools/other'
> > > >
> > > > Makefile:357: recipe for target 'install-recursive' failed
> > > >
> > > > make[2]: *** [install-recursive] Error 1
> > > >
> > > > make[2]: Leaving directory '/home/zzheng25/local/met-
6.0/src/tools'
> > > >
> > > > Makefile:354: recipe for target 'install-recursive' failed
> > > >
> > > > make[1]: *** [install-recursive] Error 1
> > > >
> > > > make[1]: Leaving directory '/home/zzheng25/local/met-6.0/src'
> > > >
> > > > Makefile:410: recipe for target 'install-recursive' failed
> > > >
> > > > make: *** [install-recursive] Error 1
> > > >
> > > >
> > > > Sincerely,
> > > > Zhonghua
> > > > ---------------------------------------------------
> > > > Zhonghua Zheng
> > > > Ph.D. Student, Air Quality Engineering
> > > > Department of Civil and Environmental Engineering (CEE)
> > > > University of Illinois at Urbana-Champaign (UIUC)
> > > >
> > > >
> > >
> > >
> > >
> >
> >
>
>
>
------------------------------------------------
Subject: MET make failed
From: Zheng, Zhonghua
Time: Thu May 11 18:41:55 2017
Dear Julie,
I'm sorry to bother you again. I tried to install MET6.0 in a server
just now. The procedures of are the same as I did for my personal
computer. However, it didn't work when I tested. Attached are the
make_install.log, config.log, and make_test.log.
The test aborted due to [ascii2nc] Segmentation fault. Would you
please give me some suggestions?
cd scripts; make
make[1]: Entering directory `/home/zzheng25/metinstall/met-
6.0/scripts'
*** Running ASCII2NC to reformat ASCII point observations into NetCDF
***
../src/tools/other/ascii2nc/ascii2nc \
../data/sample_obs/ascii/sample_ascii_obs.txt \
../out/ascii2nc/sample_ascii.nc \
-v 2
DEBUG 1: Config File:
/home/zzheng25/metinstall/MET/share/met/config/Ascii2NcConfig_default
DEBUG 2: Rejected 0 observations off the masking grid.
DEBUG 2: Rejected 0 observations outside the masking polyline.
DEBUG 2: Rejected 0 observations not matched with station ID's.
DEBUG 2: Processing observations for 5 headers.
DEBUG 1: Creating NetCDF Observation file:
../out/ascii2nc/sample_ascii.nc
make[1]: *** [ascii2nc] Segmentation fault
make[1]: Leaving directory `/home/zzheng25/metinstall/met-6.0/scripts'
make: *** [test] Error 2
Sincerely,
Zhonghua
---------------------------------------------------
Zhonghua Zheng
Ph.D. Student, Air Quality Engineering
Department of Civil and Environmental Engineering (CEE)
University of Illinois at Urbana-Champaign (UIUC)
________________________________________
From: Julie Prestopnik via RT [met_help at ucar.edu]
Sent: Thursday, May 11, 2017 4:20 PM
To: Zheng, Zhonghua
Subject: [rt.rap.ucar.edu #80419] Resolved: MET make failed
According to our records, your request has been resolved. If you have
any
further questions or concerns, please respond to this message.
------------------------------------------------
Subject: MET make failed
From: Julie Prestopnik
Time: Fri May 12 09:42:40 2017
Hi Zhonghua. I believe there may be a problem with NetCDF.
Throughout
your make_install.log file, I see:
/usr/bin/ld: warning: libnetcdf.so.11, needed by
/home/zzheng25/metinstall//lib/libnetcdf_c++4.so, may conflict with
libnetcdf.so.7
which did not exist in your other make_install.log file for your
personal
computer.
In your config.log file, I see the following are set:
MET_NETCDF='/home/zzheng25/metinstall/'
MET_NETCDFINC='/home/zzheng25/local/include'
MET_NETCDFLIB='/home/zzheng25/local/lib'
Either MET_NETCDF *or* MET_NETCDFINC *and *MET_NETCDFLIB need to be
set. If
the NetCDF include files are in /home/zzheng25/local/include and the
NetCDF
library files are in /home/zzheng25/local/lib, please unset the
MET_NETCDF
environment variable, then run "make clean", reconfigure, and then run
"make install" and "make test" again.
Please give that a try and let us know how it goes.
Thanks!
Julie
On Thu, May 11, 2017 at 6:41 PM, Zheng, Zhonghua via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
>
> Dear Julie,
>
> I'm sorry to bother you again. I tried to install MET6.0 in a server
just
> now. The procedures of are the same as I did for my personal
computer.
> However, it didn't work when I tested. Attached are the
make_install.log,
> config.log, and make_test.log.
> The test aborted due to [ascii2nc] Segmentation fault. Would you
please
> give me some suggestions?
>
> cd scripts; make
> make[1]: Entering directory `/home/zzheng25/metinstall/met-
6.0/scripts'
>
> *** Running ASCII2NC to reformat ASCII point observations into
NetCDF ***
> ../src/tools/other/ascii2nc/ascii2nc \
> ../data/sample_obs/ascii/sample_ascii_obs.txt \
> ../out/ascii2nc/sample_ascii.nc \
> -v 2
> DEBUG 1: Config File:
/home/zzheng25/metinstall/MET/share/met/config/
> Ascii2NcConfig_default
> DEBUG 2: Rejected 0 observations off the masking grid.
> DEBUG 2: Rejected 0 observations outside the masking polyline.
> DEBUG 2: Rejected 0 observations not matched with station ID's.
> DEBUG 2: Processing observations for 5 headers.
> DEBUG 1: Creating NetCDF Observation file:
../out/ascii2nc/sample_ascii.nc
> make[1]: *** [ascii2nc] Segmentation fault
> make[1]: Leaving directory `/home/zzheng25/metinstall/met-
6.0/scripts'
> make: *** [test] Error 2
>
> Sincerely,
> Zhonghua
> ---------------------------------------------------
> Zhonghua Zheng
> Ph.D. Student, Air Quality Engineering
> Department of Civil and Environmental Engineering (CEE)
> University of Illinois at Urbana-Champaign (UIUC)
>
> ________________________________________
> From: Julie Prestopnik via RT [met_help at ucar.edu]
> Sent: Thursday, May 11, 2017 4:20 PM
> To: Zheng, Zhonghua
> Subject: [rt.rap.ucar.edu #80419] Resolved: MET make failed
>
> According to our records, your request has been resolved. If you
have any
> further questions or concerns, please respond to this message.
>
>
------------------------------------------------
Subject: MET make failed
From: Julie Prestopnik
Time: Fri May 12 09:44:31 2017
Also, to follow up, the warning indicated that libnetcdf.so.11 is
needed by
/home/zzheng25/metinstall//lib/libnetcdf_c++4.so, so please check to
make
sure that you have the correct files in the location that you set your
MET
NetCDF environment variables to. Thanks!
Julie
On Fri, May 12, 2017 at 9:42 AM, Julie Prestopnik <jpresto at ucar.edu>
wrote:
> Hi Zhonghua. I believe there may be a problem with NetCDF.
Throughout
> your make_install.log file, I see:
>
> /usr/bin/ld: warning: libnetcdf.so.11, needed by
> /home/zzheng25/metinstall//lib/libnetcdf_c++4.so, may conflict with
> libnetcdf.so.7
>
> which did not exist in your other make_install.log file for your
personal
> computer.
>
> In your config.log file, I see the following are set:
>
> MET_NETCDF='/home/zzheng25/metinstall/'
> MET_NETCDFINC='/home/zzheng25/local/include'
> MET_NETCDFLIB='/home/zzheng25/local/lib'
>
> Either MET_NETCDF *or* MET_NETCDFINC *and *MET_NETCDFLIB need to be
set.
> If the NetCDF include files are in /home/zzheng25/local/include and
the
> NetCDF library files are in /home/zzheng25/local/lib, please unset
the
> MET_NETCDF environment variable, then run "make clean", reconfigure,
and
> then run "make install" and "make test" again.
>
> Please give that a try and let us know how it goes.
>
> Thanks!
>
> Julie
>
> On Thu, May 11, 2017 at 6:41 PM, Zheng, Zhonghua via RT
<met_help at ucar.edu
> > wrote:
>
>>
>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
>>
>> Dear Julie,
>>
>> I'm sorry to bother you again. I tried to install MET6.0 in a
server just
>> now. The procedures of are the same as I did for my personal
computer.
>> However, it didn't work when I tested. Attached are the
make_install.log,
>> config.log, and make_test.log.
>> The test aborted due to [ascii2nc] Segmentation fault. Would you
please
>> give me some suggestions?
>>
>> cd scripts; make
>> make[1]: Entering directory `/home/zzheng25/metinstall/met-
6.0/scripts'
>>
>> *** Running ASCII2NC to reformat ASCII point observations into
NetCDF ***
>> ../src/tools/other/ascii2nc/ascii2nc \
>> ../data/sample_obs/ascii/sample_ascii_obs.txt \
>> ../out/ascii2nc/sample_ascii.nc \
>> -v 2
>> DEBUG 1: Config File: /home/zzheng25/metinstall/MET/
>> share/met/config/Ascii2NcConfig_default
>> DEBUG 2: Rejected 0 observations off the masking grid.
>> DEBUG 2: Rejected 0 observations outside the masking polyline.
>> DEBUG 2: Rejected 0 observations not matched with station ID's.
>> DEBUG 2: Processing observations for 5 headers.
>> DEBUG 1: Creating NetCDF Observation file:
../out/ascii2nc/sample_ascii.n
>> c
>> make[1]: *** [ascii2nc] Segmentation fault
>> make[1]: Leaving directory `/home/zzheng25/metinstall/met-
6.0/scripts'
>> make: *** [test] Error 2
>>
>> Sincerely,
>> Zhonghua
>> ---------------------------------------------------
>> Zhonghua Zheng
>> Ph.D. Student, Air Quality Engineering
>> Department of Civil and Environmental Engineering (CEE)
>> University of Illinois at Urbana-Champaign (UIUC)
>>
>> ________________________________________
>> From: Julie Prestopnik via RT [met_help at ucar.edu]
>> Sent: Thursday, May 11, 2017 4:20 PM
>> To: Zheng, Zhonghua
>> Subject: [rt.rap.ucar.edu #80419] Resolved: MET make failed
>>
>> According to our records, your request has been resolved. If you
have any
>> further questions or concerns, please respond to this message.
>>
>>
>
------------------------------------------------
Subject: MET make failed
From: Zheng, Zhonghua
Time: Fri May 12 11:23:15 2017
Hi Julie,
Thank you for your reply. Is there any library that I need to install
for libnetcdf.so.11? Is is a part of the libraries (hdf5, GSL, Netcdf)
from the DTC website that I installed for MET?
Thanks,
Zhonghua
---------------------------------------------------
Zhonghua Zheng
Ph.D. Student, Air Quality Engineering
Department of Civil and Environmental Engineering (CEE)
University of Illinois at Urbana-Champaign (UIUC)
________________________________________
From: Julie Prestopnik via RT [met_help at ucar.edu]
Sent: Friday, May 12, 2017 10:44 AM
To: Zheng, Zhonghua
Subject: Re: [rt.rap.ucar.edu #80419] Resolved: MET make failed
Also, to follow up, the warning indicated that libnetcdf.so.11 is
needed by
/home/zzheng25/metinstall//lib/libnetcdf_c++4.so, so please check to
make
sure that you have the correct files in the location that you set your
MET
NetCDF environment variables to. Thanks!
Julie
On Fri, May 12, 2017 at 9:42 AM, Julie Prestopnik <jpresto at ucar.edu>
wrote:
> Hi Zhonghua. I believe there may be a problem with NetCDF.
Throughout
> your make_install.log file, I see:
>
> /usr/bin/ld: warning: libnetcdf.so.11, needed by
> /home/zzheng25/metinstall//lib/libnetcdf_c++4.so, may conflict with
> libnetcdf.so.7
>
> which did not exist in your other make_install.log file for your
personal
> computer.
>
> In your config.log file, I see the following are set:
>
> MET_NETCDF='/home/zzheng25/metinstall/'
> MET_NETCDFINC='/home/zzheng25/local/include'
> MET_NETCDFLIB='/home/zzheng25/local/lib'
>
> Either MET_NETCDF *or* MET_NETCDFINC *and *MET_NETCDFLIB need to be
set.
> If the NetCDF include files are in /home/zzheng25/local/include and
the
> NetCDF library files are in /home/zzheng25/local/lib, please unset
the
> MET_NETCDF environment variable, then run "make clean", reconfigure,
and
> then run "make install" and "make test" again.
>
> Please give that a try and let us know how it goes.
>
> Thanks!
>
> Julie
>
> On Thu, May 11, 2017 at 6:41 PM, Zheng, Zhonghua via RT
<met_help at ucar.edu
> > wrote:
>
>>
>> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
>>
>> Dear Julie,
>>
>> I'm sorry to bother you again. I tried to install MET6.0 in a
server just
>> now. The procedures of are the same as I did for my personal
computer.
>> However, it didn't work when I tested. Attached are the
make_install.log,
>> config.log, and make_test.log.
>> The test aborted due to [ascii2nc] Segmentation fault. Would you
please
>> give me some suggestions?
>>
>> cd scripts; make
>> make[1]: Entering directory `/home/zzheng25/metinstall/met-
6.0/scripts'
>>
>> *** Running ASCII2NC to reformat ASCII point observations into
NetCDF ***
>> ../src/tools/other/ascii2nc/ascii2nc \
>> ../data/sample_obs/ascii/sample_ascii_obs.txt \
>> ../out/ascii2nc/sample_ascii.nc \
>> -v 2
>> DEBUG 1: Config File: /home/zzheng25/metinstall/MET/
>> share/met/config/Ascii2NcConfig_default
>> DEBUG 2: Rejected 0 observations off the masking grid.
>> DEBUG 2: Rejected 0 observations outside the masking polyline.
>> DEBUG 2: Rejected 0 observations not matched with station ID's.
>> DEBUG 2: Processing observations for 5 headers.
>> DEBUG 1: Creating NetCDF Observation file:
../out/ascii2nc/sample_ascii.n
>> c
>> make[1]: *** [ascii2nc] Segmentation fault
>> make[1]: Leaving directory `/home/zzheng25/metinstall/met-
6.0/scripts'
>> make: *** [test] Error 2
>>
>> Sincerely,
>> Zhonghua
>> ---------------------------------------------------
>> Zhonghua Zheng
>> Ph.D. Student, Air Quality Engineering
>> Department of Civil and Environmental Engineering (CEE)
>> University of Illinois at Urbana-Champaign (UIUC)
>>
>> ________________________________________
>> From: Julie Prestopnik via RT [met_help at ucar.edu]
>> Sent: Thursday, May 11, 2017 4:20 PM
>> To: Zheng, Zhonghua
>> Subject: [rt.rap.ucar.edu #80419] Resolved: MET make failed
>>
>> According to our records, your request has been resolved. If you
have any
>> further questions or concerns, please respond to this message.
>>
>>
>
------------------------------------------------
Subject: MET make failed
From: Julie Prestopnik
Time: Fri May 12 12:32:45 2017
I have installed netcdf-4.4.1.1.zip, and I see that libnetcdf.so.11
was
installed in my lib directory from that package. I hope that helps!
Julie
On Fri, May 12, 2017 at 11:23 AM, Zheng, Zhonghua via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
>
> Hi Julie,
>
> Thank you for your reply. Is there any library that I need to
install for
> libnetcdf.so.11? Is is a part of the libraries (hdf5, GSL, Netcdf)
from the
> DTC website that I installed for MET?
>
> Thanks,
> Zhonghua
> ---------------------------------------------------
> Zhonghua Zheng
> Ph.D. Student, Air Quality Engineering
> Department of Civil and Environmental Engineering (CEE)
> University of Illinois at Urbana-Champaign (UIUC)
>
> ________________________________________
> From: Julie Prestopnik via RT [met_help at ucar.edu]
> Sent: Friday, May 12, 2017 10:44 AM
> To: Zheng, Zhonghua
> Subject: Re: [rt.rap.ucar.edu #80419] Resolved: MET make failed
>
> Also, to follow up, the warning indicated that libnetcdf.so.11 is
needed by
> /home/zzheng25/metinstall//lib/libnetcdf_c++4.so, so please check to
make
> sure that you have the correct files in the location that you set
your MET
> NetCDF environment variables to. Thanks!
>
> Julie
>
> On Fri, May 12, 2017 at 9:42 AM, Julie Prestopnik <jpresto at ucar.edu>
> wrote:
>
> > Hi Zhonghua. I believe there may be a problem with NetCDF.
Throughout
> > your make_install.log file, I see:
> >
> > /usr/bin/ld: warning: libnetcdf.so.11, needed by
> > /home/zzheng25/metinstall//lib/libnetcdf_c++4.so, may conflict
with
> > libnetcdf.so.7
> >
> > which did not exist in your other make_install.log file for your
personal
> > computer.
> >
> > In your config.log file, I see the following are set:
> >
> > MET_NETCDF='/home/zzheng25/metinstall/'
> > MET_NETCDFINC='/home/zzheng25/local/include'
> > MET_NETCDFLIB='/home/zzheng25/local/lib'
> >
> > Either MET_NETCDF *or* MET_NETCDFINC *and *MET_NETCDFLIB need to
be set.
> > If the NetCDF include files are in /home/zzheng25/local/include
and the
> > NetCDF library files are in /home/zzheng25/local/lib, please unset
the
> > MET_NETCDF environment variable, then run "make clean",
reconfigure, and
> > then run "make install" and "make test" again.
> >
> > Please give that a try and let us know how it goes.
> >
> > Thanks!
> >
> > Julie
> >
> > On Thu, May 11, 2017 at 6:41 PM, Zheng, Zhonghua via RT <
> met_help at ucar.edu
> > > wrote:
> >
> >>
> >> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
> >>
> >> Dear Julie,
> >>
> >> I'm sorry to bother you again. I tried to install MET6.0 in a
server
> just
> >> now. The procedures of are the same as I did for my personal
computer.
> >> However, it didn't work when I tested. Attached are the
> make_install.log,
> >> config.log, and make_test.log.
> >> The test aborted due to [ascii2nc] Segmentation fault. Would you
please
> >> give me some suggestions?
> >>
> >> cd scripts; make
> >> make[1]: Entering directory `/home/zzheng25/metinstall/met-
6.0/scripts'
> >>
> >> *** Running ASCII2NC to reformat ASCII point observations into
NetCDF
> ***
> >> ../src/tools/other/ascii2nc/ascii2nc \
> >> ../data/sample_obs/ascii/sample_ascii_obs.txt \
> >> ../out/ascii2nc/sample_ascii.nc \
> >> -v 2
> >> DEBUG 1: Config File: /home/zzheng25/metinstall/MET/
> >> share/met/config/Ascii2NcConfig_default
> >> DEBUG 2: Rejected 0 observations off the masking grid.
> >> DEBUG 2: Rejected 0 observations outside the masking polyline.
> >> DEBUG 2: Rejected 0 observations not matched with station ID's.
> >> DEBUG 2: Processing observations for 5 headers.
> >> DEBUG 1: Creating NetCDF Observation file:
> ../out/ascii2nc/sample_ascii.n
> >> c
> >> make[1]: *** [ascii2nc] Segmentation fault
> >> make[1]: Leaving directory `/home/zzheng25/metinstall/met-
6.0/scripts'
> >> make: *** [test] Error 2
> >>
> >> Sincerely,
> >> Zhonghua
> >> ---------------------------------------------------
> >> Zhonghua Zheng
> >> Ph.D. Student, Air Quality Engineering
> >> Department of Civil and Environmental Engineering (CEE)
> >> University of Illinois at Urbana-Champaign (UIUC)
> >>
> >> ________________________________________
> >> From: Julie Prestopnik via RT [met_help at ucar.edu]
> >> Sent: Thursday, May 11, 2017 4:20 PM
> >> To: Zheng, Zhonghua
> >> Subject: [rt.rap.ucar.edu #80419] Resolved: MET make failed
> >>
> >> According to our records, your request has been resolved. If you
have
> any
> >> further questions or concerns, please respond to this message.
> >>
> >>
> >
>
>
>
------------------------------------------------
Subject: MET make failed
From: Zheng, Zhonghua
Time: Fri May 12 12:57:03 2017
Dear Julie,
I really appreciate your help!!! Now it works. I can follow the
tutorial and deal with my data then.
Have a nice weekend!
Sincerely,
Zhonghua
---------------------------------------------------
Zhonghua Zheng
Ph.D. Student, Air Quality Engineering
Department of Civil and Environmental Engineering (CEE)
University of Illinois at Urbana-Champaign (UIUC)
________________________________________
From: Julie Prestopnik via RT [met_help at ucar.edu]
Sent: Friday, May 12, 2017 1:32 PM
To: Zheng, Zhonghua
Subject: Re: [rt.rap.ucar.edu #80419] Resolved: MET make failed
I have installed netcdf-4.4.1.1.zip, and I see that libnetcdf.so.11
was
installed in my lib directory from that package. I hope that helps!
Julie
On Fri, May 12, 2017 at 11:23 AM, Zheng, Zhonghua via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
>
> Hi Julie,
>
> Thank you for your reply. Is there any library that I need to
install for
> libnetcdf.so.11? Is is a part of the libraries (hdf5, GSL, Netcdf)
from the
> DTC website that I installed for MET?
>
> Thanks,
> Zhonghua
> ---------------------------------------------------
> Zhonghua Zheng
> Ph.D. Student, Air Quality Engineering
> Department of Civil and Environmental Engineering (CEE)
> University of Illinois at Urbana-Champaign (UIUC)
>
> ________________________________________
> From: Julie Prestopnik via RT [met_help at ucar.edu]
> Sent: Friday, May 12, 2017 10:44 AM
> To: Zheng, Zhonghua
> Subject: Re: [rt.rap.ucar.edu #80419] Resolved: MET make failed
>
> Also, to follow up, the warning indicated that libnetcdf.so.11 is
needed by
> /home/zzheng25/metinstall//lib/libnetcdf_c++4.so, so please check to
make
> sure that you have the correct files in the location that you set
your MET
> NetCDF environment variables to. Thanks!
>
> Julie
>
> On Fri, May 12, 2017 at 9:42 AM, Julie Prestopnik <jpresto at ucar.edu>
> wrote:
>
> > Hi Zhonghua. I believe there may be a problem with NetCDF.
Throughout
> > your make_install.log file, I see:
> >
> > /usr/bin/ld: warning: libnetcdf.so.11, needed by
> > /home/zzheng25/metinstall//lib/libnetcdf_c++4.so, may conflict
with
> > libnetcdf.so.7
> >
> > which did not exist in your other make_install.log file for your
personal
> > computer.
> >
> > In your config.log file, I see the following are set:
> >
> > MET_NETCDF='/home/zzheng25/metinstall/'
> > MET_NETCDFINC='/home/zzheng25/local/include'
> > MET_NETCDFLIB='/home/zzheng25/local/lib'
> >
> > Either MET_NETCDF *or* MET_NETCDFINC *and *MET_NETCDFLIB need to
be set.
> > If the NetCDF include files are in /home/zzheng25/local/include
and the
> > NetCDF library files are in /home/zzheng25/local/lib, please unset
the
> > MET_NETCDF environment variable, then run "make clean",
reconfigure, and
> > then run "make install" and "make test" again.
> >
> > Please give that a try and let us know how it goes.
> >
> > Thanks!
> >
> > Julie
> >
> > On Thu, May 11, 2017 at 6:41 PM, Zheng, Zhonghua via RT <
> met_help at ucar.edu
> > > wrote:
> >
> >>
> >> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80419 >
> >>
> >> Dear Julie,
> >>
> >> I'm sorry to bother you again. I tried to install MET6.0 in a
server
> just
> >> now. The procedures of are the same as I did for my personal
computer.
> >> However, it didn't work when I tested. Attached are the
> make_install.log,
> >> config.log, and make_test.log.
> >> The test aborted due to [ascii2nc] Segmentation fault. Would you
please
> >> give me some suggestions?
> >>
> >> cd scripts; make
> >> make[1]: Entering directory `/home/zzheng25/metinstall/met-
6.0/scripts'
> >>
> >> *** Running ASCII2NC to reformat ASCII point observations into
NetCDF
> ***
> >> ../src/tools/other/ascii2nc/ascii2nc \
> >> ../data/sample_obs/ascii/sample_ascii_obs.txt \
> >> ../out/ascii2nc/sample_ascii.nc \
> >> -v 2
> >> DEBUG 1: Config File: /home/zzheng25/metinstall/MET/
> >> share/met/config/Ascii2NcConfig_default
> >> DEBUG 2: Rejected 0 observations off the masking grid.
> >> DEBUG 2: Rejected 0 observations outside the masking polyline.
> >> DEBUG 2: Rejected 0 observations not matched with station ID's.
> >> DEBUG 2: Processing observations for 5 headers.
> >> DEBUG 1: Creating NetCDF Observation file:
> ../out/ascii2nc/sample_ascii.n
> >> c
> >> make[1]: *** [ascii2nc] Segmentation fault
> >> make[1]: Leaving directory `/home/zzheng25/metinstall/met-
6.0/scripts'
> >> make: *** [test] Error 2
> >>
> >> Sincerely,
> >> Zhonghua
> >> ---------------------------------------------------
> >> Zhonghua Zheng
> >> Ph.D. Student, Air Quality Engineering
> >> Department of Civil and Environmental Engineering (CEE)
> >> University of Illinois at Urbana-Champaign (UIUC)
> >>
> >> ________________________________________
> >> From: Julie Prestopnik via RT [met_help at ucar.edu]
> >> Sent: Thursday, May 11, 2017 4:20 PM
> >> To: Zheng, Zhonghua
> >> Subject: [rt.rap.ucar.edu #80419] Resolved: MET make failed
> >>
> >> According to our records, your request has been resolved. If you
have
> any
> >> further questions or concerns, please respond to this message.
> >>
> >>
> >
>
>
>
------------------------------------------------
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