[Met_help] [rt.rap.ucar.edu #80226] History for Grib2 Table Issue at WPC
John Halley Gotway via RT
met_help at ucar.edu
Mon May 1 14:17:24 MDT 2017
----------------------------------------------------------------
Initial Request
----------------------------------------------------------------
Good afternoon,
I am testing the newest version of METv6.0 installed by NCO at WPC with the
aid of John Halley Gotway.
I noticed some odd warnings when using pcp_combine to sum precipitation and
convert grib2 to netcdf. They are listed below:
*/opt/MET6/met6.0/bin/pcp_combine -sum 00000000_000000 1 20160623_010000 01
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/ST4_lag00.nc
-pcpdir /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/WARNING:
WARNING: Multiple GRIB2 table entries match lookup criteria (parm_name =
APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr =
0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING: parm_name: APCP,
index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab = 0, index_b = 1,
index_c = 8WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 14,
grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c = 8WARNING: Using:
parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr = 0, grib2_ltab =
0, index_b = 1, index_c = 8WARNING: DEBUG 1: [1] File
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily//ST4.2016062301.01h
matches valid time of 20160623_010000DEBUG 1: [1] Reading input file:
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily//ST4.2016062301.01hWARNING:
WARNING: Multiple GRIB2 table entries match lookup criteria (parm_name =
APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr =
0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING: parm_name: APCP,
index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab = 0, index_b = 1,
index_c = 8WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 14,
grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c = 8WARNING: Using:
parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr = 0, grib2_ltab =
0, index_b = 1, index_c = 8WARNING: DEBUG 1: Writing output file:
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/ST4_lag00.nc*
The resulting file, ST4_lag00.nc contains data, but is not readable when
using the 'ncdump' command or when running 'mtd.' Note that the same
commands work when using METv5.1. This appears to be an issue with the
grib2 tables, but I wanted to be sure.
Thank you for your help.
Mike
--
Michael J. Erickson, Ph.D
Cooperative Institute for Research in Environmental Sciences (CIRES)
CIRES Contractor for the Weather Prediction Center (WPC)
Phone: 301-683-1546
----------------------------------------------------------------
Complete Ticket History
----------------------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: John Halley Gotway
Time: Thu Apr 20 14:17:39 2017
Mike,
We just posted the first set of bugfixes for met-6.0 here:
http://www.dtcenter.org/met/users/support/known_issues/METv6.0/index.php
One of them changes those warnings to debug(3) level messages instead.
Basically, we realized the logic for when/how to do GRIB table lookups
differs in the MET library code for GRIB1 and GRIB2. We considered
using
the patch to make it consistent, but decided that that was too big of
a
change and had the potential of introducing more bugs. Instead, we'll
make
it consistent in version 6.1. The easier choice was just downgrading
that
warning.
Ultimately though, the bigger concern is the output of pcp_combine.
MET
version 6.0 includes a major change from NetCDF3 to NetCDF4. But of
course, the other MET tools should be able to read it.
You could post that output file to our anonymous ftp site and I could
take
a look:
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/ST4_lag00.nc
Here's instructions for that:
http://www.dtcenter.org/met/users/support/met_help.php#ftp
Thanks,
John
On Thu, Apr 20, 2017 at 2:10 PM, Michael Erickson - NOAA Affiliate via
RT <
met_help at ucar.edu> wrote:
>
> Thu Apr 20 14:10:51 2017: Request 80226 was acted upon.
> Transaction: Ticket created by michael.j.erickson at noaa.gov
> Queue: met_help
> Subject: Grib2 Table Issue at WPC
> Owner: Nobody
> Requestors: michael.j.erickson at noaa.gov
> Status: new
> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
>
>
> Good afternoon,
>
> I am testing the newest version of METv6.0 installed by NCO at WPC
with the
> aid of John Halley Gotway.
>
> I noticed some odd warnings when using pcp_combine to sum
precipitation and
> convert grib2 to netcdf. They are listed below:
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
> */opt/MET6/met6.0/bin/pcp_combine -sum 00000000_000000 1
20160623_010000
> 01
>
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/ST4_lag00.nc
> -pcpdir
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/WARNING:
> WARNING: Multiple GRIB2 table entries match lookup criteria
(parm_name =
> APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 1,
grib2_cntr =
> 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING: parm_name:
APCP,
> index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab = 0,
index_b = 1,
> index_c = 8WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 14,
> grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
Using:
> parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr = 0,
grib2_ltab =
> 0, index_b = 1, index_c = 8WARNING: DEBUG 1: [1] File
> /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily//
> ST4.2016062301.01h
> matches valid time of 20160623_010000DEBUG 1: [1] Reading input
file:
> /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily//
> ST4.2016062301.01hWARNING:
> WARNING: Multiple GRIB2 table entries match lookup criteria
(parm_name =
> APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 1,
grib2_cntr =
> 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING: parm_name:
APCP,
> index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab = 0,
index_b = 1,
> index_c = 8WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 14,
> grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
Using:
> parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr = 0,
grib2_ltab =
> 0, index_b = 1, index_c = 8WARNING: DEBUG 1: Writing output file:
>
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/ST4_lag00.nc*
>
> The resulting file, ST4_lag00.nc contains data, but is not readable
when
> using the 'ncdump' command or when running 'mtd.' Note that the same
> commands work when using METv5.1. This appears to be an issue with
the
> grib2 tables, but I wanted to be sure.
>
> Thank you for your help.
>
> Mike
>
> --
>
> Michael J. Erickson, Ph.D
> Cooperative Institute for Research in Environmental Sciences (CIRES)
> CIRES Contractor for the Weather Prediction Center (WPC)
>
> Phone: 301-683-1546
>
>
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: Michael Erickson - NOAA Affiliate
Time: Thu Apr 20 14:31:13 2017
Hi John,
Thank you for your helpful response. Unfortunately, I do not have ftp
on my
linux system. Would you mind if I attached the file here?
Mike
On Thu, Apr 20, 2017 at 8:17 PM, John Halley Gotway via RT <
met_help at ucar.edu> wrote:
> Mike,
>
> We just posted the first set of bugfixes for met-6.0 here:
>
http://www.dtcenter.org/met/users/support/known_issues/METv6.0/index.php
>
> One of them changes those warnings to debug(3) level messages
instead.
>
> Basically, we realized the logic for when/how to do GRIB table
lookups
> differs in the MET library code for GRIB1 and GRIB2. We considered
using
> the patch to make it consistent, but decided that that was too big
of a
> change and had the potential of introducing more bugs. Instead,
we'll make
> it consistent in version 6.1. The easier choice was just
downgrading that
> warning.
>
> Ultimately though, the bigger concern is the output of pcp_combine.
MET
> version 6.0 includes a major change from NetCDF3 to NetCDF4. But of
> course, the other MET tools should be able to read it.
>
> You could post that output file to our anonymous ftp site and I
could take
> a look:
>
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/ST4_lag00.nc
>
> Here's instructions for that:
> http://www.dtcenter.org/met/users/support/met_help.php#ftp
>
> Thanks,
> John
>
>
>
> On Thu, Apr 20, 2017 at 2:10 PM, Michael Erickson - NOAA Affiliate
via RT <
> met_help at ucar.edu> wrote:
>
> >
> > Thu Apr 20 14:10:51 2017: Request 80226 was acted upon.
> > Transaction: Ticket created by michael.j.erickson at noaa.gov
> > Queue: met_help
> > Subject: Grib2 Table Issue at WPC
> > Owner: Nobody
> > Requestors: michael.j.erickson at noaa.gov
> > Status: new
> > Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> >
> >
> > Good afternoon,
> >
> > I am testing the newest version of METv6.0 installed by NCO at WPC
with
> the
> > aid of John Halley Gotway.
> >
> > I noticed some odd warnings when using pcp_combine to sum
precipitation
> and
> > convert grib2 to netcdf. They are listed below:
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> > */opt/MET6/met6.0/bin/pcp_combine -sum 00000000_000000 1
20160623_010000
> > 01
> >
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/ST4_lag00.nc
> > -pcpdir /usr1/wpc_cpgffh/gribs//temp/2016062300_
> preacc_1_MTDdaily/WARNING:
> > WARNING: Multiple GRIB2 table entries match lookup criteria
(parm_name =
> > APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 1,
> grib2_cntr =
> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING: parm_name:
APCP,
> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab = 0,
index_b =
> 1,
> > index_c = 8WARNING: parm_name: APCP, index_a = 0, grib2_mtab =
14,
> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
Using:
> > parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr = 0,
grib2_ltab
> =
> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: [1] File
> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily//
> > ST4.2016062301.01h
> > matches valid time of 20160623_010000DEBUG 1: [1] Reading input
file:
> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily//
> > ST4.2016062301.01hWARNING:
> > WARNING: Multiple GRIB2 table entries match lookup criteria
(parm_name =
> > APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 1,
> grib2_cntr =
> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING: parm_name:
APCP,
> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab = 0,
index_b =
> 1,
> > index_c = 8WARNING: parm_name: APCP, index_a = 0, grib2_mtab =
14,
> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
Using:
> > parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr = 0,
grib2_ltab
> =
> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: Writing output file:
> >
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/ST4_lag00.nc*
> >
> > The resulting file, ST4_lag00.nc contains data, but is not
readable when
> > using the 'ncdump' command or when running 'mtd.' Note that the
same
> > commands work when using METv5.1. This appears to be an issue with
the
> > grib2 tables, but I wanted to be sure.
> >
> > Thank you for your help.
> >
> > Mike
> >
> > --
> >
> > Michael J. Erickson, Ph.D
> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > CIRES Contractor for the Weather Prediction Center (WPC)
> >
> > Phone: 301-683-1546
> >
> >
>
>
--
Michael J. Erickson, Ph.D
Cooperative Institute for Research in Environmental Sciences (CIRES)
CIRES Contractor for the Weather Prediction Center (WPC)
Phone: 301-683-1546
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: John Halley Gotway
Time: Thu Apr 20 15:02:09 2017
Sure, give it a shot. Depending on the file size it may or may not
work.
If it doesn't work, you're welcome to stash it somewhere else where I
could
go grab it. I have access to theia if you're able to push it there.
John
On Thu, Apr 20, 2017 at 2:31 PM, Michael Erickson - NOAA Affiliate via
RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
>
> Hi John,
>
> Thank you for your helpful response. Unfortunately, I do not have
ftp on my
> linux system. Would you mind if I attached the file here?
>
> Mike
>
> On Thu, Apr 20, 2017 at 8:17 PM, John Halley Gotway via RT <
> met_help at ucar.edu> wrote:
>
> > Mike,
> >
> > We just posted the first set of bugfixes for met-6.0 here:
> >
http://www.dtcenter.org/met/users/support/known_issues/METv6.0/index.php
> >
> > One of them changes those warnings to debug(3) level messages
instead.
> >
> > Basically, we realized the logic for when/how to do GRIB table
lookups
> > differs in the MET library code for GRIB1 and GRIB2. We
considered using
> > the patch to make it consistent, but decided that that was too big
of a
> > change and had the potential of introducing more bugs. Instead,
we'll
> make
> > it consistent in version 6.1. The easier choice was just
downgrading
> that
> > warning.
> >
> > Ultimately though, the bigger concern is the output of
pcp_combine. MET
> > version 6.0 includes a major change from NetCDF3 to NetCDF4. But
of
> > course, the other MET tools should be able to read it.
> >
> > You could post that output file to our anonymous ftp site and I
could
> take
> > a look:
> >
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/ST4_lag00.nc
> >
> > Here's instructions for that:
> > http://www.dtcenter.org/met/users/support/met_help.php#ftp
> >
> > Thanks,
> > John
> >
> >
> >
> > On Thu, Apr 20, 2017 at 2:10 PM, Michael Erickson - NOAA Affiliate
via
> RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > Thu Apr 20 14:10:51 2017: Request 80226 was acted upon.
> > > Transaction: Ticket created by michael.j.erickson at noaa.gov
> > > Queue: met_help
> > > Subject: Grib2 Table Issue at WPC
> > > Owner: Nobody
> > > Requestors: michael.j.erickson at noaa.gov
> > > Status: new
> > > Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226
> >
> > >
> > >
> > > Good afternoon,
> > >
> > > I am testing the newest version of METv6.0 installed by NCO at
WPC with
> > the
> > > aid of John Halley Gotway.
> > >
> > > I noticed some odd warnings when using pcp_combine to sum
precipitation
> > and
> > > convert grib2 to netcdf. They are listed below:
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > > */opt/MET6/met6.0/bin/pcp_combine -sum 00000000_000000 1
> 20160623_010000
> > > 01
> > >
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/ST4_lag00.nc
> > > -pcpdir /usr1/wpc_cpgffh/gribs//temp/2016062300_
> > preacc_1_MTDdaily/WARNING:
> > > WARNING: Multiple GRIB2 table entries match lookup criteria
(parm_name
> =
> > > APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 1,
> > grib2_cntr =
> > > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING: parm_name:
APCP,
> > > index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab = 0,
index_b
> =
> > 1,
> > > index_c = 8WARNING: parm_name: APCP, index_a = 0, grib2_mtab =
14,
> > > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
> Using:
> > > parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr = 0,
> grib2_ltab
> > =
> > > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: [1] File
> > > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily//
> > > ST4.2016062301.01h
> > > matches valid time of 20160623_010000DEBUG 1: [1] Reading input
file:
> > > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily//
> > > ST4.2016062301.01hWARNING:
> > > WARNING: Multiple GRIB2 table entries match lookup criteria
(parm_name
> =
> > > APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 1,
> > grib2_cntr =
> > > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING: parm_name:
APCP,
> > > index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab = 0,
index_b
> =
> > 1,
> > > index_c = 8WARNING: parm_name: APCP, index_a = 0, grib2_mtab =
14,
> > > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
> Using:
> > > parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr = 0,
> grib2_ltab
> > =
> > > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: Writing output
file:
> > > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/
> ST4_lag00.nc*
> > >
> > > The resulting file, ST4_lag00.nc contains data, but is not
readable
> when
> > > using the 'ncdump' command or when running 'mtd.' Note that the
same
> > > commands work when using METv5.1. This appears to be an issue
with the
> > > grib2 tables, but I wanted to be sure.
> > >
> > > Thank you for your help.
> > >
> > > Mike
> > >
> > > --
> > >
> > > Michael J. Erickson, Ph.D
> > > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > > CIRES Contractor for the Weather Prediction Center (WPC)
> > >
> > > Phone: 301-683-1546
> > >
> > >
> >
> >
>
>
> --
>
> Michael J. Erickson, Ph.D
> Cooperative Institute for Research in Environmental Sciences (CIRES)
> CIRES Contractor for the Weather Prediction Center (WPC)
>
> Phone: 301-683-1546
>
>
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: Michael Erickson - NOAA Affiliate
Time: Fri Apr 21 07:22:00 2017
Hi John,
To explain my problem better...my code is able to run METv5.1 but not
METv6.0. The exe files used are 'pcp_combine', 'regrid_data_plane' and
then
'mtd,' In METv6.0 'pcp_combine' converts grib2 to netcdf, but with the
warnings mentioned earlier and with netcdf files that are not readable
by
ncdump. 'regrid_data_plane' also works, but 'mtd' does not. The error
with
'mtd' is shown below, but I've found this mtd error output occurs even
if
the issue is something else. In this case, I believe mtd is unable to
read
the netcdf file.
Unfortunately I don't have access to theia. I'm not sure how I can
give you
the files. I do not have ftp, the sftp command fails, and the scp
command
may work but I can not create my own folder on your server a priori. I
shared some data with Tara over google drive through her noaa account.
It
contains forecast hours 1-6 of a sample "model" and "observation"
created
using METv6.0. This is after 'pcp_combine' and 'regrid_data_plane'
were
run, but before 'mtd.'
Thanks for your help and sorry for the round about way of sharing
data.
*DEBUG 2: mtd_read_data() -> processing file
"/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/HRRRv3_TLE_lag06_f1.nc"ERROR
: ERROR : ERROR : mtd_read_data() -> unable to get data plane at
time
0ERROR : *
Mike
On Fri, Apr 21, 2017 at 12:06 PM, Michael Erickson - NOAA Affiliate <
michael.j.erickson at noaa.gov> wrote:
> Hi John,
>
> Lets see if this works.
>
> Mike
>
> On Thu, Apr 20, 2017 at 8:31 PM, Michael Erickson - NOAA Affiliate <
> michael.j.erickson at noaa.gov> wrote:
>
>> Hi John,
>>
>> Thank you for your helpful response. Unfortunately, I do not have
ftp on
>> my linux system. Would you mind if I attached the file here?
>>
>> Mike
>>
>> On Thu, Apr 20, 2017 at 8:17 PM, John Halley Gotway via RT <
>> met_help at ucar.edu> wrote:
>>
>>> Mike,
>>>
>>> We just posted the first set of bugfixes for met-6.0 here:
>>>
http://www.dtcenter.org/met/users/support/known_issues/METv6.0/index.php
>>>
>>> One of them changes those warnings to debug(3) level messages
instead.
>>>
>>> Basically, we realized the logic for when/how to do GRIB table
lookups
>>> differs in the MET library code for GRIB1 and GRIB2. We
considered using
>>> the patch to make it consistent, but decided that that was too big
of a
>>> change and had the potential of introducing more bugs. Instead,
we'll
>>> make
>>> it consistent in version 6.1. The easier choice was just
downgrading
>>> that
>>> warning.
>>>
>>> Ultimately though, the bigger concern is the output of
pcp_combine. MET
>>> version 6.0 includes a major change from NetCDF3 to NetCDF4. But
of
>>> course, the other MET tools should be able to read it.
>>>
>>> You could post that output file to our anonymous ftp site and I
could
>>> take
>>> a look:
>>> /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
>>> _preacc_1_MTDdaily/ST4_lag00.nc
>>>
>>> Here's instructions for that:
>>> http://www.dtcenter.org/met/users/support/met_help.php#ftp
>>>
>>> Thanks,
>>> John
>>>
>>>
>>>
>>> On Thu, Apr 20, 2017 at 2:10 PM, Michael Erickson - NOAA Affiliate
via
>>> RT <
>>> met_help at ucar.edu> wrote:
>>>
>>> >
>>> > Thu Apr 20 14:10:51 2017: Request 80226 was acted upon.
>>> > Transaction: Ticket created by michael.j.erickson at noaa.gov
>>> > Queue: met_help
>>> > Subject: Grib2 Table Issue at WPC
>>> > Owner: Nobody
>>> > Requestors: michael.j.erickson at noaa.gov
>>> > Status: new
>>> > Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226
>>> >
>>> >
>>> >
>>> > Good afternoon,
>>> >
>>> > I am testing the newest version of METv6.0 installed by NCO at
WPC
>>> with the
>>> > aid of John Halley Gotway.
>>> >
>>> > I noticed some odd warnings when using pcp_combine to sum
>>> precipitation and
>>> > convert grib2 to netcdf. They are listed below:
>>> >
>>> >
>>> >
>>> >
>>> >
>>> >
>>> >
>>> >
>>> >
>>> >
>>> >
>>> >
>>> >
>>> >
>>> >
>>> >
>>> >
>>> >
>>> > */opt/MET6/met6.0/bin/pcp_combine -sum 00000000_000000 1
>>> 20160623_010000
>>> > 01
>>> >
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/ST4_lag00.nc
>>> > -pcpdir
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/WA
>>> RNING:
>>> > WARNING: Multiple GRIB2 table entries match lookup criteria
(parm_name
>>> =
>>> > APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 1,
>>> grib2_cntr =
>>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING: parm_name:
APCP,
>>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab = 0,
index_b
>>> = 1,
>>> > index_c = 8WARNING: parm_name: APCP, index_a = 0, grib2_mtab =
14,
>>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
>>> Using:
>>> > parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr = 0,
>>> grib2_ltab =
>>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: [1] File
>>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
>>> _preacc_1_MTDdaily//
>>> > ST4.2016062301 <(201)%20606-2301>.01h
>>> > matches valid time of 20160623_010000DEBUG 1: [1] Reading input
file:
>>> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily//
>>> > ST4.2016062301.01hWARNING:
>>> > WARNING: Multiple GRIB2 table entries match lookup criteria
(parm_name
>>> =
>>> > APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 1,
>>> grib2_cntr =
>>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING: parm_name:
APCP,
>>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab = 0,
index_b
>>> = 1,
>>> > index_c = 8WARNING: parm_name: APCP, index_a = 0, grib2_mtab =
14,
>>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
>>> Using:
>>> > parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr = 0,
>>> grib2_ltab =
>>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: Writing output
file:
>>> >
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/ST4_lag00.nc
>>> *
>>> >
>>> > The resulting file, ST4_lag00.nc contains data, but is not
readable
>>> when
>>> > using the 'ncdump' command or when running 'mtd.' Note that the
same
>>> > commands work when using METv5.1. This appears to be an issue
with the
>>> > grib2 tables, but I wanted to be sure.
>>> >
>>> > Thank you for your help.
>>> >
>>> > Mike
>>> >
>>> > --
>>> >
>>> > Michael J. Erickson, Ph.D
>>> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
>>> > CIRES Contractor for the Weather Prediction Center (WPC)
>>> >
>>> > Phone: 301-683-1546
>>> >
>>> >
>>>
>>>
>>
>>
>> --
>>
>> Michael J. Erickson, Ph.D
>> Cooperative Institute for Research in Environmental Sciences
(CIRES)
>> CIRES Contractor for the Weather Prediction Center (WPC)
>>
>> Phone: 301-683-1546 <(301)%20683-1546>
>>
>>
>
>
> --
>
> Michael J. Erickson, Ph.D
> Cooperative Institute for Research in Environmental Sciences (CIRES)
> CIRES Contractor for the Weather Prediction Center (WPC)
>
> Phone: 301-683-1546 <(301)%20683-1546>
>
>
--
Michael J. Erickson, Ph.D
Cooperative Institute for Research in Environmental Sciences (CIRES)
CIRES Contractor for the Weather Prediction Center (WPC)
Phone: 301-683-1546
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: Tara Jensen
Time: Fri Apr 21 07:45:13 2017
John, I'll grab the data in a little bit and put it on dakota.
Cheers, Tara
On Apr 21, 2017 7:22 AM, "Michael Erickson - NOAA Affiliate via RT" <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
>
> Hi John,
>
> To explain my problem better...my code is able to run METv5.1 but
not
> METv6.0. The exe files used are 'pcp_combine', 'regrid_data_plane'
and then
> 'mtd,' In METv6.0 'pcp_combine' converts grib2 to netcdf, but with
the
> warnings mentioned earlier and with netcdf files that are not
readable by
> ncdump. 'regrid_data_plane' also works, but 'mtd' does not. The
error with
> 'mtd' is shown below, but I've found this mtd error output occurs
even if
> the issue is something else. In this case, I believe mtd is unable
to read
> the netcdf file.
>
> Unfortunately I don't have access to theia. I'm not sure how I can
give you
> the files. I do not have ftp, the sftp command fails, and the scp
command
> may work but I can not create my own folder on your server a priori.
I
> shared some data with Tara over google drive through her noaa
account. It
> contains forecast hours 1-6 of a sample "model" and "observation"
created
> using METv6.0. This is after 'pcp_combine' and 'regrid_data_plane'
were
> run, but before 'mtd.'
>
> Thanks for your help and sorry for the round about way of sharing
data.
>
>
>
>
>
>
> *DEBUG 2: mtd_read_data() -> processing file
> "/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/
> HRRRv3_TLE_lag06_f1.nc"ERROR
> : ERROR : ERROR : mtd_read_data() -> unable to get data plane at
time
> 0ERROR : *
>
> Mike
>
> On Fri, Apr 21, 2017 at 12:06 PM, Michael Erickson - NOAA Affiliate
<
> michael.j.erickson at noaa.gov> wrote:
>
> > Hi John,
> >
> > Lets see if this works.
> >
> > Mike
> >
> > On Thu, Apr 20, 2017 at 8:31 PM, Michael Erickson - NOAA Affiliate
<
> > michael.j.erickson at noaa.gov> wrote:
> >
> >> Hi John,
> >>
> >> Thank you for your helpful response. Unfortunately, I do not have
ftp on
> >> my linux system. Would you mind if I attached the file here?
> >>
> >> Mike
> >>
> >> On Thu, Apr 20, 2017 at 8:17 PM, John Halley Gotway via RT <
> >> met_help at ucar.edu> wrote:
> >>
> >>> Mike,
> >>>
> >>> We just posted the first set of bugfixes for met-6.0 here:
> >>> http://www.dtcenter.org/met/users/support/known_issues/
> METv6.0/index.php
> >>>
> >>> One of them changes those warnings to debug(3) level messages
instead.
> >>>
> >>> Basically, we realized the logic for when/how to do GRIB table
lookups
> >>> differs in the MET library code for GRIB1 and GRIB2. We
considered
> using
> >>> the patch to make it consistent, but decided that that was too
big of a
> >>> change and had the potential of introducing more bugs. Instead,
we'll
> >>> make
> >>> it consistent in version 6.1. The easier choice was just
downgrading
> >>> that
> >>> warning.
> >>>
> >>> Ultimately though, the bigger concern is the output of
pcp_combine.
> MET
> >>> version 6.0 includes a major change from NetCDF3 to NetCDF4.
But of
> >>> course, the other MET tools should be able to read it.
> >>>
> >>> You could post that output file to our anonymous ftp site and I
could
> >>> take
> >>> a look:
> >>> /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
> >>> _preacc_1_MTDdaily/ST4_lag00.nc
> >>>
> >>> Here's instructions for that:
> >>> http://www.dtcenter.org/met/users/support/met_help.php#ftp
> >>>
> >>> Thanks,
> >>> John
> >>>
> >>>
> >>>
> >>> On Thu, Apr 20, 2017 at 2:10 PM, Michael Erickson - NOAA
Affiliate via
> >>> RT <
> >>> met_help at ucar.edu> wrote:
> >>>
> >>> >
> >>> > Thu Apr 20 14:10:51 2017: Request 80226 was acted upon.
> >>> > Transaction: Ticket created by michael.j.erickson at noaa.gov
> >>> > Queue: met_help
> >>> > Subject: Grib2 Table Issue at WPC
> >>> > Owner: Nobody
> >>> > Requestors: michael.j.erickson at noaa.gov
> >>> > Status: new
> >>> > Ticket <URL: https://rt.rap.ucar.edu/rt/
> Ticket/Display.html?id=80226
> >>> >
> >>> >
> >>> >
> >>> > Good afternoon,
> >>> >
> >>> > I am testing the newest version of METv6.0 installed by NCO at
WPC
> >>> with the
> >>> > aid of John Halley Gotway.
> >>> >
> >>> > I noticed some odd warnings when using pcp_combine to sum
> >>> precipitation and
> >>> > convert grib2 to netcdf. They are listed below:
> >>> >
> >>> >
> >>> >
> >>> >
> >>> >
> >>> >
> >>> >
> >>> >
> >>> >
> >>> >
> >>> >
> >>> >
> >>> >
> >>> >
> >>> >
> >>> >
> >>> >
> >>> >
> >>> > */opt/MET6/met6.0/bin/pcp_combine -sum 00000000_000000 1
> >>> 20160623_010000
> >>> > 01
> >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/
> ST4_lag00.nc
> >>> > -pcpdir
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/WA
> >>> RNING:
> >>> > WARNING: Multiple GRIB2 table entries match lookup criteria
> (parm_name
> >>> =
> >>> > APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 1,
> >>> grib2_cntr =
> >>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
parm_name:
> APCP,
> >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab = 0,
> index_b
> >>> = 1,
> >>> > index_c = 8WARNING: parm_name: APCP, index_a = 0, grib2_mtab
= 14,
> >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
> >>> Using:
> >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr = 0,
> >>> grib2_ltab =
> >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: [1] File
> >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
> >>> _preacc_1_MTDdaily//
> >>> > ST4.2016062301 <(201)%20606-2301>.01h
> >>> > matches valid time of 20160623_010000DEBUG 1: [1] Reading
input file:
> >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily//
> >>> > ST4.2016062301.01hWARNING:
> >>> > WARNING: Multiple GRIB2 table entries match lookup criteria
> (parm_name
> >>> =
> >>> > APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab = 1,
> >>> grib2_cntr =
> >>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
parm_name:
> APCP,
> >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab = 0,
> index_b
> >>> = 1,
> >>> > index_c = 8WARNING: parm_name: APCP, index_a = 0, grib2_mtab
= 14,
> >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
> >>> Using:
> >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr = 0,
> >>> grib2_ltab =
> >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: Writing output
file:
> >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/
> ST4_lag00.nc
> >>> *
> >>> >
> >>> > The resulting file, ST4_lag00.nc contains data, but is not
readable
> >>> when
> >>> > using the 'ncdump' command or when running 'mtd.' Note that
the same
> >>> > commands work when using METv5.1. This appears to be an issue
with
> the
> >>> > grib2 tables, but I wanted to be sure.
> >>> >
> >>> > Thank you for your help.
> >>> >
> >>> > Mike
> >>> >
> >>> > --
> >>> >
> >>> > Michael J. Erickson, Ph.D
> >>> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> >>> > CIRES Contractor for the Weather Prediction Center (WPC)
> >>> >
> >>> > Phone: 301-683-1546
> >>> >
> >>> >
> >>>
> >>>
> >>
> >>
> >> --
> >>
> >> Michael J. Erickson, Ph.D
> >> Cooperative Institute for Research in Environmental Sciences
(CIRES)
> >> CIRES Contractor for the Weather Prediction Center (WPC)
> >>
> >> Phone: 301-683-1546 <(301)%20683-1546>
> >>
> >>
> >
> >
> > --
> >
> > Michael J. Erickson, Ph.D
> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > CIRES Contractor for the Weather Prediction Center (WPC)
> >
> > Phone: 301-683-1546 <(301)%20683-1546>
> >
> >
>
>
> --
>
> Michael J. Erickson, Ph.D
> Cooperative Institute for Research in Environmental Sciences (CIRES)
> CIRES Contractor for the Weather Prediction Center (WPC)
>
> Phone: 301-683-1546
>
>
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: Michael Erickson - NOAA Affiliate
Time: Fri Apr 21 07:58:17 2017
Thanks Tara!
On Fri, Apr 21, 2017 at 1:45 PM, Tara Jensen via RT
<met_help at ucar.edu>
wrote:
> John, I'll grab the data in a little bit and put it on dakota.
>
> Cheers, Tara
>
> On Apr 21, 2017 7:22 AM, "Michael Erickson - NOAA Affiliate via RT"
<
> met_help at ucar.edu> wrote:
>
> >
> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> >
> > Hi John,
> >
> > To explain my problem better...my code is able to run METv5.1 but
not
> > METv6.0. The exe files used are 'pcp_combine', 'regrid_data_plane'
and
> then
> > 'mtd,' In METv6.0 'pcp_combine' converts grib2 to netcdf, but with
the
> > warnings mentioned earlier and with netcdf files that are not
readable by
> > ncdump. 'regrid_data_plane' also works, but 'mtd' does not. The
error
> with
> > 'mtd' is shown below, but I've found this mtd error output occurs
even if
> > the issue is something else. In this case, I believe mtd is unable
to
> read
> > the netcdf file.
> >
> > Unfortunately I don't have access to theia. I'm not sure how I can
give
> you
> > the files. I do not have ftp, the sftp command fails, and the scp
command
> > may work but I can not create my own folder on your server a
priori. I
> > shared some data with Tara over google drive through her noaa
account. It
> > contains forecast hours 1-6 of a sample "model" and "observation"
created
> > using METv6.0. This is after 'pcp_combine' and 'regrid_data_plane'
were
> > run, but before 'mtd.'
> >
> > Thanks for your help and sorry for the round about way of sharing
data.
> >
> >
> >
> >
> >
> >
> > *DEBUG 2: mtd_read_data() -> processing file
> > "/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/
> > HRRRv3_TLE_lag06_f1.nc"ERROR
> > : ERROR : ERROR : mtd_read_data() -> unable to get data plane
at time
> > 0ERROR : *
> >
> > Mike
> >
> > On Fri, Apr 21, 2017 at 12:06 PM, Michael Erickson - NOAA
Affiliate <
> > michael.j.erickson at noaa.gov> wrote:
> >
> > > Hi John,
> > >
> > > Lets see if this works.
> > >
> > > Mike
> > >
> > > On Thu, Apr 20, 2017 at 8:31 PM, Michael Erickson - NOAA
Affiliate <
> > > michael.j.erickson at noaa.gov> wrote:
> > >
> > >> Hi John,
> > >>
> > >> Thank you for your helpful response. Unfortunately, I do not
have ftp
> on
> > >> my linux system. Would you mind if I attached the file here?
> > >>
> > >> Mike
> > >>
> > >> On Thu, Apr 20, 2017 at 8:17 PM, John Halley Gotway via RT <
> > >> met_help at ucar.edu> wrote:
> > >>
> > >>> Mike,
> > >>>
> > >>> We just posted the first set of bugfixes for met-6.0 here:
> > >>> http://www.dtcenter.org/met/users/support/known_issues/
> > METv6.0/index.php
> > >>>
> > >>> One of them changes those warnings to debug(3) level messages
> instead.
> > >>>
> > >>> Basically, we realized the logic for when/how to do GRIB table
> lookups
> > >>> differs in the MET library code for GRIB1 and GRIB2. We
considered
> > using
> > >>> the patch to make it consistent, but decided that that was too
big
> of a
> > >>> change and had the potential of introducing more bugs.
Instead,
> we'll
> > >>> make
> > >>> it consistent in version 6.1. The easier choice was just
downgrading
> > >>> that
> > >>> warning.
> > >>>
> > >>> Ultimately though, the bigger concern is the output of
pcp_combine.
> > MET
> > >>> version 6.0 includes a major change from NetCDF3 to NetCDF4.
But of
> > >>> course, the other MET tools should be able to read it.
> > >>>
> > >>> You could post that output file to our anonymous ftp site and
I could
> > >>> take
> > >>> a look:
> > >>> /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
> > >>> _preacc_1_MTDdaily/ST4_lag00.nc
> > >>>
> > >>> Here's instructions for that:
> > >>> http://www.dtcenter.org/met/users/support/met_help.php#ftp
> > >>>
> > >>> Thanks,
> > >>> John
> > >>>
> > >>>
> > >>>
> > >>> On Thu, Apr 20, 2017 at 2:10 PM, Michael Erickson - NOAA
Affiliate
> via
> > >>> RT <
> > >>> met_help at ucar.edu> wrote:
> > >>>
> > >>> >
> > >>> > Thu Apr 20 14:10:51 2017: Request 80226 was acted upon.
> > >>> > Transaction: Ticket created by michael.j.erickson at noaa.gov
> > >>> > Queue: met_help
> > >>> > Subject: Grib2 Table Issue at WPC
> > >>> > Owner: Nobody
> > >>> > Requestors: michael.j.erickson at noaa.gov
> > >>> > Status: new
> > >>> > Ticket <URL: https://rt.rap.ucar.edu/rt/
> > Ticket/Display.html?id=80226
> > >>> >
> > >>> >
> > >>> >
> > >>> > Good afternoon,
> > >>> >
> > >>> > I am testing the newest version of METv6.0 installed by NCO
at WPC
> > >>> with the
> > >>> > aid of John Halley Gotway.
> > >>> >
> > >>> > I noticed some odd warnings when using pcp_combine to sum
> > >>> precipitation and
> > >>> > convert grib2 to netcdf. They are listed below:
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> >
> > >>> > */opt/MET6/met6.0/bin/pcp_combine -sum 00000000_000000 1
> > >>> 20160623_010000
> > >>> > 01
> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/
> > ST4_lag00.nc
> > >>> > -pcpdir
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/
> WA
> > >>> RNING:
> > >>> > WARNING: Multiple GRIB2 table entries match lookup criteria
> > (parm_name
> > >>> =
> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab =
1,
> > >>> grib2_cntr =
> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
parm_name:
> > APCP,
> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab =
0,
> > index_b
> > >>> = 1,
> > >>> > index_c = 8WARNING: parm_name: APCP, index_a = 0,
grib2_mtab =
> 14,
> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
> > >>> Using:
> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr =
0,
> > >>> grib2_ltab =
> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: [1] File
> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
> > >>> _preacc_1_MTDdaily//
> > >>> > ST4.2016062301 <(201)%20606-2301>.01h
> > >>> > matches valid time of 20160623_010000DEBUG 1: [1] Reading
input
> file:
> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily//
> > >>> > ST4.2016062301.01hWARNING:
> > >>> > WARNING: Multiple GRIB2 table entries match lookup criteria
> > (parm_name
> > >>> =
> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab =
1,
> > >>> grib2_cntr =
> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
parm_name:
> > APCP,
> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab =
0,
> > index_b
> > >>> = 1,
> > >>> > index_c = 8WARNING: parm_name: APCP, index_a = 0,
grib2_mtab =
> 14,
> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
> > >>> Using:
> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr =
0,
> > >>> grib2_ltab =
> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: Writing output
file:
> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/
> > ST4_lag00.nc
> > >>> *
> > >>> >
> > >>> > The resulting file, ST4_lag00.nc contains data, but is not
readable
> > >>> when
> > >>> > using the 'ncdump' command or when running 'mtd.' Note that
the
> same
> > >>> > commands work when using METv5.1. This appears to be an
issue with
> > the
> > >>> > grib2 tables, but I wanted to be sure.
> > >>> >
> > >>> > Thank you for your help.
> > >>> >
> > >>> > Mike
> > >>> >
> > >>> > --
> > >>> >
> > >>> > Michael J. Erickson, Ph.D
> > >>> > Cooperative Institute for Research in Environmental Sciences
> (CIRES)
> > >>> > CIRES Contractor for the Weather Prediction Center (WPC)
> > >>> >
> > >>> > Phone: 301-683-1546
> > >>> >
> > >>> >
> > >>>
> > >>>
> > >>
> > >>
> > >> --
> > >>
> > >> Michael J. Erickson, Ph.D
> > >> Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > >> CIRES Contractor for the Weather Prediction Center (WPC)
> > >>
> > >> Phone: 301-683-1546 <(301)%20683-1546>
> > >>
> > >>
> > >
> > >
> > > --
> > >
> > > Michael J. Erickson, Ph.D
> > > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > > CIRES Contractor for the Weather Prediction Center (WPC)
> > >
> > > Phone: 301-683-1546 <(301)%20683-1546>
> > >
> > >
> >
> >
> > --
> >
> > Michael J. Erickson, Ph.D
> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > CIRES Contractor for the Weather Prediction Center (WPC)
> >
> > Phone: 301-683-1546
> >
> >
>
>
--
Michael J. Erickson, Ph.D
Cooperative Institute for Research in Environmental Sciences (CIRES)
CIRES Contractor for the Weather Prediction Center (WPC)
Phone: 301-683-1546
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: Michael Erickson - NOAA Affiliate
Time: Fri Apr 21 12:15:49 2017
Hi All,
I tried doing a similar thing with MODE. Similar to MTD, pcp_combine
and
regrid_data_plan are run first. The error is below:
*/opt/MET6/met6.0/bin/mode
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc
/export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_USE_SAMP_f24_p6_t0.5
-outdir
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdailyDEBUG 1:
Default Config File:
/opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG 1: Match
Config
File:
/export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_USE_SAMP_f24_p6_t0.5DEBUG
1: Merge Config File:
/export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_USE_SAMP_f24_p6_t0.5DEBUG
1: Forecast File:
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.ncDEBUG
1: Observation File:
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.ncERROR
: ERROR : setup_fcst_obs_data() -> can't get data from file
"/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc"ERROR
: HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0: #000:
H5T.c
line 1723 in H5Tclose(): not a datatype major: Invalid arguments to
routine minor: Inappropriate typeNetCDF: HDF errorfile: ncFile.cpp
line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0:
#000:
H5T.c line 1723 in H5Tclose(): not a datatype major: Invalid
arguments
to routine minor: Inappropriate typeNetCDF: HDF errorfile:
ncFile.cpp
line:33*
Looks to be HDF related. Thanks!
Mike
On Fri, Apr 21, 2017 at 1:58 PM, Michael Erickson - NOAA Affiliate <
michael.j.erickson at noaa.gov> wrote:
> Thanks Tara!
>
> On Fri, Apr 21, 2017 at 1:45 PM, Tara Jensen via RT
<met_help at ucar.edu>
> wrote:
>
>> John, I'll grab the data in a little bit and put it on dakota.
>>
>> Cheers, Tara
>>
>> On Apr 21, 2017 7:22 AM, "Michael Erickson - NOAA Affiliate via RT"
<
>> met_help at ucar.edu> wrote:
>>
>> >
>> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
>> >
>> > Hi John,
>> >
>> > To explain my problem better...my code is able to run METv5.1 but
not
>> > METv6.0. The exe files used are 'pcp_combine',
'regrid_data_plane' and
>> then
>> > 'mtd,' In METv6.0 'pcp_combine' converts grib2 to netcdf, but
with the
>> > warnings mentioned earlier and with netcdf files that are not
readable
>> by
>> > ncdump. 'regrid_data_plane' also works, but 'mtd' does not. The
error
>> with
>> > 'mtd' is shown below, but I've found this mtd error output occurs
even
>> if
>> > the issue is something else. In this case, I believe mtd is
unable to
>> read
>> > the netcdf file.
>> >
>> > Unfortunately I don't have access to theia. I'm not sure how I
can give
>> you
>> > the files. I do not have ftp, the sftp command fails, and the scp
>> command
>> > may work but I can not create my own folder on your server a
priori. I
>> > shared some data with Tara over google drive through her noaa
account.
>> It
>> > contains forecast hours 1-6 of a sample "model" and "observation"
>> created
>> > using METv6.0. This is after 'pcp_combine' and
'regrid_data_plane' were
>> > run, but before 'mtd.'
>> >
>> > Thanks for your help and sorry for the round about way of sharing
data.
>> >
>> >
>> >
>> >
>> >
>> >
>> > *DEBUG 2: mtd_read_data() -> processing file
>> > "/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/
>> > HRRRv3_TLE_lag06_f1.nc"ERROR
>> > : ERROR : ERROR : mtd_read_data() -> unable to get data plane
at
>> time
>> > 0ERROR : *
>> >
>> > Mike
>> >
>> > On Fri, Apr 21, 2017 at 12:06 PM, Michael Erickson - NOAA
Affiliate <
>> > michael.j.erickson at noaa.gov> wrote:
>> >
>> > > Hi John,
>> > >
>> > > Lets see if this works.
>> > >
>> > > Mike
>> > >
>> > > On Thu, Apr 20, 2017 at 8:31 PM, Michael Erickson - NOAA
Affiliate <
>> > > michael.j.erickson at noaa.gov> wrote:
>> > >
>> > >> Hi John,
>> > >>
>> > >> Thank you for your helpful response. Unfortunately, I do not
have
>> ftp on
>> > >> my linux system. Would you mind if I attached the file here?
>> > >>
>> > >> Mike
>> > >>
>> > >> On Thu, Apr 20, 2017 at 8:17 PM, John Halley Gotway via RT <
>> > >> met_help at ucar.edu> wrote:
>> > >>
>> > >>> Mike,
>> > >>>
>> > >>> We just posted the first set of bugfixes for met-6.0 here:
>> > >>> http://www.dtcenter.org/met/users/support/known_issues/
>> > METv6.0/index.php
>> > >>>
>> > >>> One of them changes those warnings to debug(3) level messages
>> instead.
>> > >>>
>> > >>> Basically, we realized the logic for when/how to do GRIB
table
>> lookups
>> > >>> differs in the MET library code for GRIB1 and GRIB2. We
considered
>> > using
>> > >>> the patch to make it consistent, but decided that that was
too big
>> of a
>> > >>> change and had the potential of introducing more bugs.
Instead,
>> we'll
>> > >>> make
>> > >>> it consistent in version 6.1. The easier choice was just
>> downgrading
>> > >>> that
>> > >>> warning.
>> > >>>
>> > >>> Ultimately though, the bigger concern is the output of
pcp_combine.
>> > MET
>> > >>> version 6.0 includes a major change from NetCDF3 to NetCDF4.
But of
>> > >>> course, the other MET tools should be able to read it.
>> > >>>
>> > >>> You could post that output file to our anonymous ftp site and
I
>> could
>> > >>> take
>> > >>> a look:
>> > >>> /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
>> > >>> _preacc_1_MTDdaily/ST4_lag00.nc
>> > >>>
>> > >>> Here's instructions for that:
>> > >>> http://www.dtcenter.org/met/users/support/met_help.php#ftp
>> > >>>
>> > >>> Thanks,
>> > >>> John
>> > >>>
>> > >>>
>> > >>>
>> > >>> On Thu, Apr 20, 2017 at 2:10 PM, Michael Erickson - NOAA
Affiliate
>> via
>> > >>> RT <
>> > >>> met_help at ucar.edu> wrote:
>> > >>>
>> > >>> >
>> > >>> > Thu Apr 20 14:10:51 2017: Request 80226 was acted upon.
>> > >>> > Transaction: Ticket created by michael.j.erickson at noaa.gov
>> > >>> > Queue: met_help
>> > >>> > Subject: Grib2 Table Issue at WPC
>> > >>> > Owner: Nobody
>> > >>> > Requestors: michael.j.erickson at noaa.gov
>> > >>> > Status: new
>> > >>> > Ticket <URL: https://rt.rap.ucar.edu/rt/
>> > Ticket/Display.html?id=80226
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> > Good afternoon,
>> > >>> >
>> > >>> > I am testing the newest version of METv6.0 installed by NCO
at WPC
>> > >>> with the
>> > >>> > aid of John Halley Gotway.
>> > >>> >
>> > >>> > I noticed some odd warnings when using pcp_combine to sum
>> > >>> precipitation and
>> > >>> > convert grib2 to netcdf. They are listed below:
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> >
>> > >>> > */opt/MET6/met6.0/bin/pcp_combine -sum 00000000_000000 1
>> > >>> 20160623_010000
>> > >>> > 01
>> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
>> _preacc_1_MTDdaily/
>> > ST4_lag00.nc
>> > >>> > -pcpdir /usr1/wpc_cpgffh/gribs//temp/2016062300
>> <(201)%20606-2300>_preacc_1_MTDdaily/WA
>> > >>> RNING:
>> > >>> > WARNING: Multiple GRIB2 table entries match lookup criteria
>> > (parm_name
>> > >>> =
>> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab =
1,
>> > >>> grib2_cntr =
>> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
parm_name:
>> > APCP,
>> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab =
0,
>> > index_b
>> > >>> = 1,
>> > >>> > index_c = 8WARNING: parm_name: APCP, index_a = 0,
grib2_mtab =
>> 14,
>> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
>> > >>> Using:
>> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr =
0,
>> > >>> grib2_ltab =
>> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: [1] File
>> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
>> > >>> _preacc_1_MTDdaily//
>> > >>> > ST4.2016062301 <(201)%20606-2301>.01h
>> > >>> > matches valid time of 20160623_010000DEBUG 1: [1] Reading
input
>> file:
>> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily//
>> > >>> > ST4.2016062301.01hWARNING:
>> > >>> > WARNING: Multiple GRIB2 table entries match lookup criteria
>> > (parm_name
>> > >>> =
>> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab =
1,
>> > >>> grib2_cntr =
>> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
parm_name:
>> > APCP,
>> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab =
0,
>> > index_b
>> > >>> = 1,
>> > >>> > index_c = 8WARNING: parm_name: APCP, index_a = 0,
grib2_mtab =
>> 14,
>> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
>> > >>> Using:
>> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr =
0,
>> > >>> grib2_ltab =
>> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: Writing output
file:
>> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
>> _preacc_1_MTDdaily/
>> > ST4_lag00.nc
>> > >>> *
>> > >>> >
>> > >>> > The resulting file, ST4_lag00.nc contains data, but is not
>> readable
>> > >>> when
>> > >>> > using the 'ncdump' command or when running 'mtd.' Note that
the
>> same
>> > >>> > commands work when using METv5.1. This appears to be an
issue with
>> > the
>> > >>> > grib2 tables, but I wanted to be sure.
>> > >>> >
>> > >>> > Thank you for your help.
>> > >>> >
>> > >>> > Mike
>> > >>> >
>> > >>> > --
>> > >>> >
>> > >>> > Michael J. Erickson, Ph.D
>> > >>> > Cooperative Institute for Research in Environmental
Sciences
>> (CIRES)
>> > >>> > CIRES Contractor for the Weather Prediction Center (WPC)
>> > >>> >
>> > >>> > Phone: 301-683-1546 <(301)%20683-1546>
>> > >>> >
>> > >>> >
>> > >>>
>> > >>>
>> > >>
>> > >>
>> > >> --
>> > >>
>> > >> Michael J. Erickson, Ph.D
>> > >> Cooperative Institute for Research in Environmental Sciences
(CIRES)
>> > >> CIRES Contractor for the Weather Prediction Center (WPC)
>> > >>
>> > >> Phone: 301-683-1546 <(301)%20683-1546>
>> > >>
>> > >>
>> > >
>> > >
>> > > --
>> > >
>> > > Michael J. Erickson, Ph.D
>> > > Cooperative Institute for Research in Environmental Sciences
(CIRES)
>> > > CIRES Contractor for the Weather Prediction Center (WPC)
>> > >
>> > > Phone: 301-683-1546 <(301)%20683-1546>
>> > >
>> > >
>> >
>> >
>> > --
>> >
>> > Michael J. Erickson, Ph.D
>> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
>> > CIRES Contractor for the Weather Prediction Center (WPC)
>> >
>> > Phone: 301-683-1546
>> >
>> >
>>
>>
>
>
> --
>
> Michael J. Erickson, Ph.D
> Cooperative Institute for Research in Environmental Sciences (CIRES)
> CIRES Contractor for the Weather Prediction Center (WPC)
>
> Phone: 301-683-1546 <(301)%20683-1546>
>
>
--
Michael J. Erickson, Ph.D
Cooperative Institute for Research in Environmental Sciences (CIRES)
CIRES Contractor for the Weather Prediction Center (WPC)
Phone: 301-683-1546
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: John Halley Gotway
Time: Fri Apr 21 12:23:51 2017
Mike,
This looks to me like an issue with the environment. I think these
sort of
issues are inevitable as we switch from using NetCDF3 to NetCDF4.
NetCDF4
is built upon HDF5, so generally, you can interpret HDF5 errors as
being
problems with NetCDF.
On theia, wcoss, and HPC machines as NCAR, we've begun using
modulefiles
(i.e. module load met/6.0) and those files set up the environment in
the
required way. But lacking that, we should just check how you have
LD_LIBRARY_PATH set:
echo $LD_LIBRARY_PATH
That environment variables needs to include the directories containing
the
NetCDF and HDF5 libraries (usually, I've seen them placed into the
same
directory).
Try running:
grep MET_NETCDF /opt/MET6/met6.0/config.log
Hopefully, that'll tell us where the NetCDF library used to compile
MET
actually lives on your system.
Thanks,
John
On Fri, Apr 21, 2017 at 12:15 PM, Michael Erickson - NOAA Affiliate
via RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
>
> Hi All,
>
> I tried doing a similar thing with MODE. Similar to MTD, pcp_combine
and
> regrid_data_plan are run first. The error is below:
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
> */opt/MET6/met6.0/bin/mode
>
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/HRRRv3_TLE_
> lag06_f6.nc
> /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> HRRRv3_TLE_lag06_f6.nc
> /export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_USE_SAMP_f24_p6_t0.5
> -outdir
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdailyDEBUG 1:
> Default Config File:
> /opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG 1: Match
Config
> File:
> /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> USE_SAMP_f24_p6_t0.5DEBUG
> 1: Merge Config File:
> /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> USE_SAMP_f24_p6_t0.5DEBUG
> 1: Forecast File:
> /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> HRRRv3_TLE_lag06_f6.ncDEBUG
> 1: Observation File:
> /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> HRRRv3_TLE_lag06_f6.ncERROR
> : ERROR : setup_fcst_obs_data() -> can't get data from file
> "/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> HRRRv3_TLE_lag06_f6.nc"ERROR
> : HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0: #000:
H5T.c
> line 1723 in H5Tclose(): not a datatype major: Invalid arguments
to
> routine minor: Inappropriate typeNetCDF: HDF errorfile:
ncFile.cpp
> line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0:
#000:
> H5T.c line 1723 in H5Tclose(): not a datatype major: Invalid
arguments
> to routine minor: Inappropriate typeNetCDF: HDF errorfile:
ncFile.cpp
> line:33*
> Looks to be HDF related. Thanks!
>
> Mike
>
>
> On Fri, Apr 21, 2017 at 1:58 PM, Michael Erickson - NOAA Affiliate <
> michael.j.erickson at noaa.gov> wrote:
>
> > Thanks Tara!
> >
> > On Fri, Apr 21, 2017 at 1:45 PM, Tara Jensen via RT
<met_help at ucar.edu>
> > wrote:
> >
> >> John, I'll grab the data in a little bit and put it on dakota.
> >>
> >> Cheers, Tara
> >>
> >> On Apr 21, 2017 7:22 AM, "Michael Erickson - NOAA Affiliate via
RT" <
> >> met_help at ucar.edu> wrote:
> >>
> >> >
> >> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> >> >
> >> > Hi John,
> >> >
> >> > To explain my problem better...my code is able to run METv5.1
but not
> >> > METv6.0. The exe files used are 'pcp_combine',
'regrid_data_plane' and
> >> then
> >> > 'mtd,' In METv6.0 'pcp_combine' converts grib2 to netcdf, but
with the
> >> > warnings mentioned earlier and with netcdf files that are not
readable
> >> by
> >> > ncdump. 'regrid_data_plane' also works, but 'mtd' does not. The
error
> >> with
> >> > 'mtd' is shown below, but I've found this mtd error output
occurs even
> >> if
> >> > the issue is something else. In this case, I believe mtd is
unable to
> >> read
> >> > the netcdf file.
> >> >
> >> > Unfortunately I don't have access to theia. I'm not sure how I
can
> give
> >> you
> >> > the files. I do not have ftp, the sftp command fails, and the
scp
> >> command
> >> > may work but I can not create my own folder on your server a
priori. I
> >> > shared some data with Tara over google drive through her noaa
account.
> >> It
> >> > contains forecast hours 1-6 of a sample "model" and
"observation"
> >> created
> >> > using METv6.0. This is after 'pcp_combine' and
'regrid_data_plane'
> were
> >> > run, but before 'mtd.'
> >> >
> >> > Thanks for your help and sorry for the round about way of
sharing
> data.
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> > *DEBUG 2: mtd_read_data() -> processing file
> >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/
> >> > HRRRv3_TLE_lag06_f1.nc"ERROR
> >> > : ERROR : ERROR : mtd_read_data() -> unable to get data
plane at
> >> time
> >> > 0ERROR : *
> >> >
> >> > Mike
> >> >
> >> > On Fri, Apr 21, 2017 at 12:06 PM, Michael Erickson - NOAA
Affiliate <
> >> > michael.j.erickson at noaa.gov> wrote:
> >> >
> >> > > Hi John,
> >> > >
> >> > > Lets see if this works.
> >> > >
> >> > > Mike
> >> > >
> >> > > On Thu, Apr 20, 2017 at 8:31 PM, Michael Erickson - NOAA
Affiliate <
> >> > > michael.j.erickson at noaa.gov> wrote:
> >> > >
> >> > >> Hi John,
> >> > >>
> >> > >> Thank you for your helpful response. Unfortunately, I do not
have
> >> ftp on
> >> > >> my linux system. Would you mind if I attached the file here?
> >> > >>
> >> > >> Mike
> >> > >>
> >> > >> On Thu, Apr 20, 2017 at 8:17 PM, John Halley Gotway via RT <
> >> > >> met_help at ucar.edu> wrote:
> >> > >>
> >> > >>> Mike,
> >> > >>>
> >> > >>> We just posted the first set of bugfixes for met-6.0 here:
> >> > >>> http://www.dtcenter.org/met/users/support/known_issues/
> >> > METv6.0/index.php
> >> > >>>
> >> > >>> One of them changes those warnings to debug(3) level
messages
> >> instead.
> >> > >>>
> >> > >>> Basically, we realized the logic for when/how to do GRIB
table
> >> lookups
> >> > >>> differs in the MET library code for GRIB1 and GRIB2. We
> considered
> >> > using
> >> > >>> the patch to make it consistent, but decided that that was
too big
> >> of a
> >> > >>> change and had the potential of introducing more bugs.
Instead,
> >> we'll
> >> > >>> make
> >> > >>> it consistent in version 6.1. The easier choice was just
> >> downgrading
> >> > >>> that
> >> > >>> warning.
> >> > >>>
> >> > >>> Ultimately though, the bigger concern is the output of
> pcp_combine.
> >> > MET
> >> > >>> version 6.0 includes a major change from NetCDF3 to
NetCDF4. But
> of
> >> > >>> course, the other MET tools should be able to read it.
> >> > >>>
> >> > >>> You could post that output file to our anonymous ftp site
and I
> >> could
> >> > >>> take
> >> > >>> a look:
> >> > >>> /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
> >> > >>> _preacc_1_MTDdaily/ST4_lag00.nc
> >> > >>>
> >> > >>> Here's instructions for that:
> >> > >>> http://www.dtcenter.org/met/users/support/met_help.php#ftp
> >> > >>>
> >> > >>> Thanks,
> >> > >>> John
> >> > >>>
> >> > >>>
> >> > >>>
> >> > >>> On Thu, Apr 20, 2017 at 2:10 PM, Michael Erickson - NOAA
Affiliate
> >> via
> >> > >>> RT <
> >> > >>> met_help at ucar.edu> wrote:
> >> > >>>
> >> > >>> >
> >> > >>> > Thu Apr 20 14:10:51 2017: Request 80226 was acted upon.
> >> > >>> > Transaction: Ticket created by
michael.j.erickson at noaa.gov
> >> > >>> > Queue: met_help
> >> > >>> > Subject: Grib2 Table Issue at WPC
> >> > >>> > Owner: Nobody
> >> > >>> > Requestors: michael.j.erickson at noaa.gov
> >> > >>> > Status: new
> >> > >>> > Ticket <URL: https://rt.rap.ucar.edu/rt/
> >> > Ticket/Display.html?id=80226
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> > Good afternoon,
> >> > >>> >
> >> > >>> > I am testing the newest version of METv6.0 installed by
NCO at
> WPC
> >> > >>> with the
> >> > >>> > aid of John Halley Gotway.
> >> > >>> >
> >> > >>> > I noticed some odd warnings when using pcp_combine to sum
> >> > >>> precipitation and
> >> > >>> > convert grib2 to netcdf. They are listed below:
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> >
> >> > >>> > */opt/MET6/met6.0/bin/pcp_combine -sum 00000000_000000 1
> >> > >>> 20160623_010000
> >> > >>> > 01
> >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> >> _preacc_1_MTDdaily/
> >> > ST4_lag00.nc
> >> > >>> > -pcpdir /usr1/wpc_cpgffh/gribs//temp/2016062300
> >> <(201)%20606-2300>_preacc_1_MTDdaily/WA
> >> > >>> RNING:
> >> > >>> > WARNING: Multiple GRIB2 table entries match lookup
criteria
> >> > (parm_name
> >> > >>> =
> >> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab
= 1,
> >> > >>> grib2_cntr =
> >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
parm_name:
> >> > APCP,
> >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab
= 0,
> >> > index_b
> >> > >>> = 1,
> >> > >>> > index_c = 8WARNING: parm_name: APCP, index_a = 0,
grib2_mtab =
> >> 14,
> >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c =
> 8WARNING:
> >> > >>> Using:
> >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr
= 0,
> >> > >>> grib2_ltab =
> >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: [1] File
> >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> >> > >>> _preacc_1_MTDdaily//
> >> > >>> > ST4.2016062301 <(201)%20606-2301>.01h
> >> > >>> > matches valid time of 20160623_010000DEBUG 1: [1] Reading
input
> >> file:
> >> > >>> >
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily//
> >> > >>> > ST4.2016062301.01hWARNING:
> >> > >>> > WARNING: Multiple GRIB2 table entries match lookup
criteria
> >> > (parm_name
> >> > >>> =
> >> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0, grib2_mtab
= 1,
> >> > >>> grib2_cntr =
> >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
parm_name:
> >> > APCP,
> >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57, grib2_ltab
= 0,
> >> > index_b
> >> > >>> = 1,
> >> > >>> > index_c = 8WARNING: parm_name: APCP, index_a = 0,
grib2_mtab =
> >> 14,
> >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c =
> 8WARNING:
> >> > >>> Using:
> >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1, grib2_cntr
= 0,
> >> > >>> grib2_ltab =
> >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: Writing
output
> file:
> >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> >> _preacc_1_MTDdaily/
> >> > ST4_lag00.nc
> >> > >>> *
> >> > >>> >
> >> > >>> > The resulting file, ST4_lag00.nc contains data, but is
not
> >> readable
> >> > >>> when
> >> > >>> > using the 'ncdump' command or when running 'mtd.' Note
that the
> >> same
> >> > >>> > commands work when using METv5.1. This appears to be an
issue
> with
> >> > the
> >> > >>> > grib2 tables, but I wanted to be sure.
> >> > >>> >
> >> > >>> > Thank you for your help.
> >> > >>> >
> >> > >>> > Mike
> >> > >>> >
> >> > >>> > --
> >> > >>> >
> >> > >>> > Michael J. Erickson, Ph.D
> >> > >>> > Cooperative Institute for Research in Environmental
Sciences
> >> (CIRES)
> >> > >>> > CIRES Contractor for the Weather Prediction Center (WPC)
> >> > >>> >
> >> > >>> > Phone: 301-683-1546 <(301)%20683-1546>
> >> > >>> >
> >> > >>> >
> >> > >>>
> >> > >>>
> >> > >>
> >> > >>
> >> > >> --
> >> > >>
> >> > >> Michael J. Erickson, Ph.D
> >> > >> Cooperative Institute for Research in Environmental Sciences
> (CIRES)
> >> > >> CIRES Contractor for the Weather Prediction Center (WPC)
> >> > >>
> >> > >> Phone: 301-683-1546 <(301)%20683-1546>
> >> > >>
> >> > >>
> >> > >
> >> > >
> >> > > --
> >> > >
> >> > > Michael J. Erickson, Ph.D
> >> > > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> >> > > CIRES Contractor for the Weather Prediction Center (WPC)
> >> > >
> >> > > Phone: 301-683-1546 <(301)%20683-1546>
> >> > >
> >> > >
> >> >
> >> >
> >> > --
> >> >
> >> > Michael J. Erickson, Ph.D
> >> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> >> > CIRES Contractor for the Weather Prediction Center (WPC)
> >> >
> >> > Phone: 301-683-1546
> >> >
> >> >
> >>
> >>
> >
> >
> > --
> >
> > Michael J. Erickson, Ph.D
> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > CIRES Contractor for the Weather Prediction Center (WPC)
> >
> > Phone: 301-683-1546 <(301)%20683-1546>
> >
> >
>
>
> --
>
> Michael J. Erickson, Ph.D
> Cooperative Institute for Research in Environmental Sciences (CIRES)
> CIRES Contractor for the Weather Prediction Center (WPC)
>
> Phone: 301-683-1546
>
>
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: Michael Erickson - NOAA Affiliate
Time: Fri Apr 21 14:12:20 2017
Thanks John,
To answer your first question:
*echo
$LD_LIBRARY_PATH/lib:/export-5/ncosrvnfs-
cp/nawips2/os/linux2.6.32_x86_64/lib:/usr/lib:/usr/lib64:/opt/MET6/external_libs:/opt/MET6/external_libs/lib:/usr/lib64/openmpi/lib/*
To answer your second:
*grep MET_NETCDF /opt/MET6/met6.0/config.loggrep:
/opt/MET6/met6.0/config.log: No such file or directory*
However, MET_NETCDF is set to /opt/MET6/external_libs
Hope that helps,
Mike
On Fri, Apr 21, 2017 at 6:23 PM, John Halley Gotway via RT <
met_help at ucar.edu> wrote:
> Mike,
>
> This looks to me like an issue with the environment. I think these
sort of
> issues are inevitable as we switch from using NetCDF3 to NetCDF4.
NetCDF4
> is built upon HDF5, so generally, you can interpret HDF5 errors as
being
> problems with NetCDF.
>
> On theia, wcoss, and HPC machines as NCAR, we've begun using
modulefiles
> (i.e. module load met/6.0) and those files set up the environment in
the
> required way. But lacking that, we should just check how you have
> LD_LIBRARY_PATH set:
>
> echo $LD_LIBRARY_PATH
>
> That environment variables needs to include the directories
containing the
> NetCDF and HDF5 libraries (usually, I've seen them placed into the
same
> directory).
>
> Try running:
> grep MET_NETCDF /opt/MET6/met6.0/config.log
>
> Hopefully, that'll tell us where the NetCDF library used to compile
MET
> actually lives on your system.
>
> Thanks,
> John
>
>
>
> On Fri, Apr 21, 2017 at 12:15 PM, Michael Erickson - NOAA Affiliate
via RT
> <
> met_help at ucar.edu> wrote:
>
> >
> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> >
> > Hi All,
> >
> > I tried doing a similar thing with MODE. Similar to MTD,
pcp_combine and
> > regrid_data_plan are run first. The error is below:
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> > */opt/MET6/met6.0/bin/mode
> >
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/HRRRv3_TLE_
> > lag06_f6.nc
> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> > HRRRv3_TLE_lag06_f6.nc
> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> USE_SAMP_f24_p6_t0.5
> > -outdir
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdailyDEBUG
> 1:
> > Default Config File:
> > /opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG 1: Match
> Config
> > File:
> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> > USE_SAMP_f24_p6_t0.5DEBUG
> > 1: Merge Config File:
> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> > USE_SAMP_f24_p6_t0.5DEBUG
> > 1: Forecast File:
> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> > HRRRv3_TLE_lag06_f6.ncDEBUG
> > 1: Observation File:
> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> > HRRRv3_TLE_lag06_f6.ncERROR
> > : ERROR : setup_fcst_obs_data() -> can't get data from file
> > "/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> > HRRRv3_TLE_lag06_f6.nc"ERROR
> > : HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0:
#000:
> H5T.c
> > line 1723 in H5Tclose(): not a datatype major: Invalid
arguments to
> > routine minor: Inappropriate typeNetCDF: HDF errorfile:
ncFile.cpp
> > line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0:
#000:
> > H5T.c line 1723 in H5Tclose(): not a datatype major: Invalid
arguments
> > to routine minor: Inappropriate typeNetCDF: HDF errorfile:
ncFile.cpp
> > line:33*
> > Looks to be HDF related. Thanks!
> >
> > Mike
> >
> >
> > On Fri, Apr 21, 2017 at 1:58 PM, Michael Erickson - NOAA Affiliate
<
> > michael.j.erickson at noaa.gov> wrote:
> >
> > > Thanks Tara!
> > >
> > > On Fri, Apr 21, 2017 at 1:45 PM, Tara Jensen via RT
<met_help at ucar.edu
> >
> > > wrote:
> > >
> > >> John, I'll grab the data in a little bit and put it on dakota.
> > >>
> > >> Cheers, Tara
> > >>
> > >> On Apr 21, 2017 7:22 AM, "Michael Erickson - NOAA Affiliate via
RT" <
> > >> met_help at ucar.edu> wrote:
> > >>
> > >> >
> > >> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226
>
> > >> >
> > >> > Hi John,
> > >> >
> > >> > To explain my problem better...my code is able to run METv5.1
but
> not
> > >> > METv6.0. The exe files used are 'pcp_combine',
'regrid_data_plane'
> and
> > >> then
> > >> > 'mtd,' In METv6.0 'pcp_combine' converts grib2 to netcdf, but
with
> the
> > >> > warnings mentioned earlier and with netcdf files that are not
> readable
> > >> by
> > >> > ncdump. 'regrid_data_plane' also works, but 'mtd' does not.
The
> error
> > >> with
> > >> > 'mtd' is shown below, but I've found this mtd error output
occurs
> even
> > >> if
> > >> > the issue is something else. In this case, I believe mtd is
unable
> to
> > >> read
> > >> > the netcdf file.
> > >> >
> > >> > Unfortunately I don't have access to theia. I'm not sure how
I can
> > give
> > >> you
> > >> > the files. I do not have ftp, the sftp command fails, and the
scp
> > >> command
> > >> > may work but I can not create my own folder on your server a
> priori. I
> > >> > shared some data with Tara over google drive through her noaa
> account.
> > >> It
> > >> > contains forecast hours 1-6 of a sample "model" and
"observation"
> > >> created
> > >> > using METv6.0. This is after 'pcp_combine' and
'regrid_data_plane'
> > were
> > >> > run, but before 'mtd.'
> > >> >
> > >> > Thanks for your help and sorry for the round about way of
sharing
> > data.
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> > *DEBUG 2: mtd_read_data() -> processing file
> > >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily/
> > >> > HRRRv3_TLE_lag06_f1.nc"ERROR
> > >> > : ERROR : ERROR : mtd_read_data() -> unable to get data
plane at
> > >> time
> > >> > 0ERROR : *
> > >> >
> > >> > Mike
> > >> >
> > >> > On Fri, Apr 21, 2017 at 12:06 PM, Michael Erickson - NOAA
Affiliate
> <
> > >> > michael.j.erickson at noaa.gov> wrote:
> > >> >
> > >> > > Hi John,
> > >> > >
> > >> > > Lets see if this works.
> > >> > >
> > >> > > Mike
> > >> > >
> > >> > > On Thu, Apr 20, 2017 at 8:31 PM, Michael Erickson - NOAA
> Affiliate <
> > >> > > michael.j.erickson at noaa.gov> wrote:
> > >> > >
> > >> > >> Hi John,
> > >> > >>
> > >> > >> Thank you for your helpful response. Unfortunately, I do
not have
> > >> ftp on
> > >> > >> my linux system. Would you mind if I attached the file
here?
> > >> > >>
> > >> > >> Mike
> > >> > >>
> > >> > >> On Thu, Apr 20, 2017 at 8:17 PM, John Halley Gotway via RT
<
> > >> > >> met_help at ucar.edu> wrote:
> > >> > >>
> > >> > >>> Mike,
> > >> > >>>
> > >> > >>> We just posted the first set of bugfixes for met-6.0
here:
> > >> > >>> http://www.dtcenter.org/met/users/support/known_issues/
> > >> > METv6.0/index.php
> > >> > >>>
> > >> > >>> One of them changes those warnings to debug(3) level
messages
> > >> instead.
> > >> > >>>
> > >> > >>> Basically, we realized the logic for when/how to do GRIB
table
> > >> lookups
> > >> > >>> differs in the MET library code for GRIB1 and GRIB2. We
> > considered
> > >> > using
> > >> > >>> the patch to make it consistent, but decided that that
was too
> big
> > >> of a
> > >> > >>> change and had the potential of introducing more bugs.
Instead,
> > >> we'll
> > >> > >>> make
> > >> > >>> it consistent in version 6.1. The easier choice was just
> > >> downgrading
> > >> > >>> that
> > >> > >>> warning.
> > >> > >>>
> > >> > >>> Ultimately though, the bigger concern is the output of
> > pcp_combine.
> > >> > MET
> > >> > >>> version 6.0 includes a major change from NetCDF3 to
NetCDF4.
> But
> > of
> > >> > >>> course, the other MET tools should be able to read it.
> > >> > >>>
> > >> > >>> You could post that output file to our anonymous ftp site
and I
> > >> could
> > >> > >>> take
> > >> > >>> a look:
> > >> > >>> /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> > >> > >>> _preacc_1_MTDdaily/ST4_lag00.nc
> > >> > >>>
> > >> > >>> Here's instructions for that:
> > >> > >>>
http://www.dtcenter.org/met/users/support/met_help.php#ftp
> > >> > >>>
> > >> > >>> Thanks,
> > >> > >>> John
> > >> > >>>
> > >> > >>>
> > >> > >>>
> > >> > >>> On Thu, Apr 20, 2017 at 2:10 PM, Michael Erickson - NOAA
> Affiliate
> > >> via
> > >> > >>> RT <
> > >> > >>> met_help at ucar.edu> wrote:
> > >> > >>>
> > >> > >>> >
> > >> > >>> > Thu Apr 20 14:10:51 2017: Request 80226 was acted upon.
> > >> > >>> > Transaction: Ticket created by
michael.j.erickson at noaa.gov
> > >> > >>> > Queue: met_help
> > >> > >>> > Subject: Grib2 Table Issue at WPC
> > >> > >>> > Owner: Nobody
> > >> > >>> > Requestors: michael.j.erickson at noaa.gov
> > >> > >>> > Status: new
> > >> > >>> > Ticket <URL: https://rt.rap.ucar.edu/rt/
> > >> > Ticket/Display.html?id=80226
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> > Good afternoon,
> > >> > >>> >
> > >> > >>> > I am testing the newest version of METv6.0 installed by
NCO at
> > WPC
> > >> > >>> with the
> > >> > >>> > aid of John Halley Gotway.
> > >> > >>> >
> > >> > >>> > I noticed some odd warnings when using pcp_combine to
sum
> > >> > >>> precipitation and
> > >> > >>> > convert grib2 to netcdf. They are listed below:
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> >
> > >> > >>> > */opt/MET6/met6.0/bin/pcp_combine -sum 00000000_000000
1
> > >> > >>> 20160623_010000
> > >> > >>> > 01
> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> > >> _preacc_1_MTDdaily/
> > >> > ST4_lag00.nc
> > >> > >>> > -pcpdir /usr1/wpc_cpgffh/gribs//temp/2016062300
> > >> <(201)%20606-2300>_preacc_1_MTDdaily/WA
> > >> > >>> RNING:
> > >> > >>> > WARNING: Multiple GRIB2 table entries match lookup
criteria
> > >> > (parm_name
> > >> > >>> =
> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0,
grib2_mtab = 1,
> > >> > >>> grib2_cntr =
> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
> parm_name:
> > >> > APCP,
> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57,
grib2_ltab = 0,
> > >> > index_b
> > >> > >>> = 1,
> > >> > >>> > index_c = 8WARNING: parm_name: APCP, index_a = 0,
> grib2_mtab =
> > >> 14,
> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c =
> > 8WARNING:
> > >> > >>> Using:
> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1,
grib2_cntr = 0,
> > >> > >>> grib2_ltab =
> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: [1] File
> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> > >> > >>> _preacc_1_MTDdaily//
> > >> > >>> > ST4.2016062301 <(201)%20606-2301>.01h
> > >> > >>> > matches valid time of 20160623_010000DEBUG 1: [1]
Reading
> input
> > >> file:
> > >> > >>> >
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_1_MTDdaily//
> > >> > >>> > ST4.2016062301.01hWARNING:
> > >> > >>> > WARNING: Multiple GRIB2 table entries match lookup
criteria
> > >> > (parm_name
> > >> > >>> =
> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0,
grib2_mtab = 1,
> > >> > >>> grib2_cntr =
> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
> parm_name:
> > >> > APCP,
> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57,
grib2_ltab = 0,
> > >> > index_b
> > >> > >>> = 1,
> > >> > >>> > index_c = 8WARNING: parm_name: APCP, index_a = 0,
> grib2_mtab =
> > >> 14,
> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c =
> > 8WARNING:
> > >> > >>> Using:
> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1,
grib2_cntr = 0,
> > >> > >>> grib2_ltab =
> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: Writing
output
> > file:
> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> > >> _preacc_1_MTDdaily/
> > >> > ST4_lag00.nc
> > >> > >>> *
> > >> > >>> >
> > >> > >>> > The resulting file, ST4_lag00.nc contains data, but is
not
> > >> readable
> > >> > >>> when
> > >> > >>> > using the 'ncdump' command or when running 'mtd.' Note
that
> the
> > >> same
> > >> > >>> > commands work when using METv5.1. This appears to be an
issue
> > with
> > >> > the
> > >> > >>> > grib2 tables, but I wanted to be sure.
> > >> > >>> >
> > >> > >>> > Thank you for your help.
> > >> > >>> >
> > >> > >>> > Mike
> > >> > >>> >
> > >> > >>> > --
> > >> > >>> >
> > >> > >>> > Michael J. Erickson, Ph.D
> > >> > >>> > Cooperative Institute for Research in Environmental
Sciences
> > >> (CIRES)
> > >> > >>> > CIRES Contractor for the Weather Prediction Center
(WPC)
> > >> > >>> >
> > >> > >>> > Phone: 301-683-1546 <(301)%20683-1546>
> > >> > >>> >
> > >> > >>> >
> > >> > >>>
> > >> > >>>
> > >> > >>
> > >> > >>
> > >> > >> --
> > >> > >>
> > >> > >> Michael J. Erickson, Ph.D
> > >> > >> Cooperative Institute for Research in Environmental
Sciences
> > (CIRES)
> > >> > >> CIRES Contractor for the Weather Prediction Center (WPC)
> > >> > >>
> > >> > >> Phone: 301-683-1546 <(301)%20683-1546>
> > >> > >>
> > >> > >>
> > >> > >
> > >> > >
> > >> > > --
> > >> > >
> > >> > > Michael J. Erickson, Ph.D
> > >> > > Cooperative Institute for Research in Environmental
Sciences
> (CIRES)
> > >> > > CIRES Contractor for the Weather Prediction Center (WPC)
> > >> > >
> > >> > > Phone: 301-683-1546 <(301)%20683-1546>
> > >> > >
> > >> > >
> > >> >
> > >> >
> > >> > --
> > >> >
> > >> > Michael J. Erickson, Ph.D
> > >> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > >> > CIRES Contractor for the Weather Prediction Center (WPC)
> > >> >
> > >> > Phone: 301-683-1546
> > >> >
> > >> >
> > >>
> > >>
> > >
> > >
> > > --
> > >
> > > Michael J. Erickson, Ph.D
> > > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > > CIRES Contractor for the Weather Prediction Center (WPC)
> > >
> > > Phone: 301-683-1546 <(301)%20683-1546>
> > >
> > >
> >
> >
> > --
> >
> > Michael J. Erickson, Ph.D
> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > CIRES Contractor for the Weather Prediction Center (WPC)
> >
> > Phone: 301-683-1546
> >
> >
>
>
--
Michael J. Erickson, Ph.D
Cooperative Institute for Research in Environmental Sciences (CIRES)
CIRES Contractor for the Weather Prediction Center (WPC)
Phone: 301-683-1546
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: Michael Erickson - NOAA Affiliate
Time: Fri Apr 21 14:28:52 2017
I believe the directory you're referring to is:
/opt/MET6/external_libs/bin/. I've added that to LD_LIBRARY_PATH, but
it
still errors.
Mike
On Fri, Apr 21, 2017 at 8:12 PM, Michael Erickson - NOAA Affiliate <
michael.j.erickson at noaa.gov> wrote:
> Thanks John,
>
> To answer your first question:
>
>
>
>
> *echo
> $LD_LIBRARY_PATH/lib:/export-5/ncosrvnfs-
cp/nawips2/os/linux2.6.32_x86_64/lib:/usr/lib:/usr/lib64:/opt/MET6/external_libs:/opt/MET6/external_libs/lib:/usr/lib64/openmpi/lib/*
> To answer your second:
>
>
>
>
> *grep MET_NETCDF /opt/MET6/met6.0/config.loggrep:
> /opt/MET6/met6.0/config.log: No such file or directory*
> However, MET_NETCDF is set to /opt/MET6/external_libs
>
> Hope that helps,
>
> Mike
>
> On Fri, Apr 21, 2017 at 6:23 PM, John Halley Gotway via RT <
> met_help at ucar.edu> wrote:
>
>> Mike,
>>
>> This looks to me like an issue with the environment. I think these
sort
>> of
>> issues are inevitable as we switch from using NetCDF3 to NetCDF4.
NetCDF4
>> is built upon HDF5, so generally, you can interpret HDF5 errors as
being
>> problems with NetCDF.
>>
>> On theia, wcoss, and HPC machines as NCAR, we've begun using
modulefiles
>> (i.e. module load met/6.0) and those files set up the environment
in the
>> required way. But lacking that, we should just check how you have
>> LD_LIBRARY_PATH set:
>>
>> echo $LD_LIBRARY_PATH
>>
>> That environment variables needs to include the directories
containing the
>> NetCDF and HDF5 libraries (usually, I've seen them placed into the
same
>> directory).
>>
>> Try running:
>> grep MET_NETCDF /opt/MET6/met6.0/config.log
>>
>> Hopefully, that'll tell us where the NetCDF library used to compile
MET
>> actually lives on your system.
>>
>> Thanks,
>> John
>>
>>
>>
>> On Fri, Apr 21, 2017 at 12:15 PM, Michael Erickson - NOAA Affiliate
via
>> RT <
>> met_help at ucar.edu> wrote:
>>
>> >
>> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
>> >
>> > Hi All,
>> >
>> > I tried doing a similar thing with MODE. Similar to MTD,
pcp_combine and
>> > regrid_data_plan are run first. The error is below:
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> >
>> > */opt/MET6/met6.0/bin/mode
>> >
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/HRRRv3_TLE_
>> > lag06_f6.nc
>> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
>> > HRRRv3_TLE_lag06_f6.nc
>> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_USE_
>> SAMP_f24_p6_t0.5
>> > -outdir /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
>> _preacc_6_MODEdailyDEBUG 1:
>> > Default Config File:
>> > /opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG 1:
Match
>> Config
>> > File:
>> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
>> > USE_SAMP_f24_p6_t0.5DEBUG
>> > 1: Merge Config File:
>> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
>> > USE_SAMP_f24_p6_t0.5DEBUG
>> > 1: Forecast File:
>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
>> _preacc_6_MODEdaily/
>> > HRRRv3_TLE_lag06_f6.ncDEBUG
>> > 1: Observation File:
>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
>> _preacc_6_MODEdaily/
>> > HRRRv3_TLE_lag06_f6.ncERROR
>> > : ERROR : setup_fcst_obs_data() -> can't get data from file
>> > "/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
>> > HRRRv3_TLE_lag06_f6.nc"ERROR
>> > : HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0:
#000:
>> H5T.c
>> > line 1723 in H5Tclose(): not a datatype major: Invalid
arguments to
>> > routine minor: Inappropriate typeNetCDF: HDF errorfile:
ncFile.cpp
>> > line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread
0:
>> #000:
>> > H5T.c line 1723 in H5Tclose(): not a datatype major: Invalid
>> arguments
>> > to routine minor: Inappropriate typeNetCDF: HDF errorfile:
ncFile.cpp
>> > line:33*
>> > Looks to be HDF related. Thanks!
>> >
>> > Mike
>> >
>> >
>> > On Fri, Apr 21, 2017 at 1:58 PM, Michael Erickson - NOAA
Affiliate <
>> > michael.j.erickson at noaa.gov> wrote:
>> >
>> > > Thanks Tara!
>> > >
>> > > On Fri, Apr 21, 2017 at 1:45 PM, Tara Jensen via RT <
>> met_help at ucar.edu>
>> > > wrote:
>> > >
>> > >> John, I'll grab the data in a little bit and put it on
dakota.
>> > >>
>> > >> Cheers, Tara
>> > >>
>> > >> On Apr 21, 2017 7:22 AM, "Michael Erickson - NOAA Affiliate
via RT" <
>> > >> met_help at ucar.edu> wrote:
>> > >>
>> > >> >
>> > >> > <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
>> > >> >
>> > >> > Hi John,
>> > >> >
>> > >> > To explain my problem better...my code is able to run
METv5.1 but
>> not
>> > >> > METv6.0. The exe files used are 'pcp_combine',
'regrid_data_plane'
>> and
>> > >> then
>> > >> > 'mtd,' In METv6.0 'pcp_combine' converts grib2 to netcdf,
but with
>> the
>> > >> > warnings mentioned earlier and with netcdf files that are
not
>> readable
>> > >> by
>> > >> > ncdump. 'regrid_data_plane' also works, but 'mtd' does not.
The
>> error
>> > >> with
>> > >> > 'mtd' is shown below, but I've found this mtd error output
occurs
>> even
>> > >> if
>> > >> > the issue is something else. In this case, I believe mtd is
unable
>> to
>> > >> read
>> > >> > the netcdf file.
>> > >> >
>> > >> > Unfortunately I don't have access to theia. I'm not sure how
I can
>> > give
>> > >> you
>> > >> > the files. I do not have ftp, the sftp command fails, and
the scp
>> > >> command
>> > >> > may work but I can not create my own folder on your server a
>> priori. I
>> > >> > shared some data with Tara over google drive through her
noaa
>> account.
>> > >> It
>> > >> > contains forecast hours 1-6 of a sample "model" and
"observation"
>> > >> created
>> > >> > using METv6.0. This is after 'pcp_combine' and
'regrid_data_plane'
>> > were
>> > >> > run, but before 'mtd.'
>> > >> >
>> > >> > Thanks for your help and sorry for the round about way of
sharing
>> > data.
>> > >> >
>> > >> >
>> > >> >
>> > >> >
>> > >> >
>> > >> >
>> > >> > *DEBUG 2: mtd_read_data() -> processing file
>> > >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
>> _preacc_1_MTDdaily/
>> > >> > HRRRv3_TLE_lag06_f1.nc"ERROR
>> > >> > : ERROR : ERROR : mtd_read_data() -> unable to get data
plane
>> at
>> > >> time
>> > >> > 0ERROR : *
>> > >> >
>> > >> > Mike
>> > >> >
>> > >> > On Fri, Apr 21, 2017 at 12:06 PM, Michael Erickson - NOAA
>> Affiliate <
>> > >> > michael.j.erickson at noaa.gov> wrote:
>> > >> >
>> > >> > > Hi John,
>> > >> > >
>> > >> > > Lets see if this works.
>> > >> > >
>> > >> > > Mike
>> > >> > >
>> > >> > > On Thu, Apr 20, 2017 at 8:31 PM, Michael Erickson - NOAA
>> Affiliate <
>> > >> > > michael.j.erickson at noaa.gov> wrote:
>> > >> > >
>> > >> > >> Hi John,
>> > >> > >>
>> > >> > >> Thank you for your helpful response. Unfortunately, I do
not
>> have
>> > >> ftp on
>> > >> > >> my linux system. Would you mind if I attached the file
here?
>> > >> > >>
>> > >> > >> Mike
>> > >> > >>
>> > >> > >> On Thu, Apr 20, 2017 at 8:17 PM, John Halley Gotway via
RT <
>> > >> > >> met_help at ucar.edu> wrote:
>> > >> > >>
>> > >> > >>> Mike,
>> > >> > >>>
>> > >> > >>> We just posted the first set of bugfixes for met-6.0
here:
>> > >> > >>> http://www.dtcenter.org/met/users/support/known_issues/
>> > >> > METv6.0/index.php
>> > >> > >>>
>> > >> > >>> One of them changes those warnings to debug(3) level
messages
>> > >> instead.
>> > >> > >>>
>> > >> > >>> Basically, we realized the logic for when/how to do GRIB
table
>> > >> lookups
>> > >> > >>> differs in the MET library code for GRIB1 and GRIB2. We
>> > considered
>> > >> > using
>> > >> > >>> the patch to make it consistent, but decided that that
was too
>> big
>> > >> of a
>> > >> > >>> change and had the potential of introducing more bugs.
>> Instead,
>> > >> we'll
>> > >> > >>> make
>> > >> > >>> it consistent in version 6.1. The easier choice was
just
>> > >> downgrading
>> > >> > >>> that
>> > >> > >>> warning.
>> > >> > >>>
>> > >> > >>> Ultimately though, the bigger concern is the output of
>> > pcp_combine.
>> > >> > MET
>> > >> > >>> version 6.0 includes a major change from NetCDF3 to
NetCDF4.
>> But
>> > of
>> > >> > >>> course, the other MET tools should be able to read it.
>> > >> > >>>
>> > >> > >>> You could post that output file to our anonymous ftp
site and I
>> > >> could
>> > >> > >>> take
>> > >> > >>> a look:
>> > >> > >>> /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
>> <(201)%20606-2300>
>> > >> > >>> _preacc_1_MTDdaily/ST4_lag00.nc
>> > >> > >>>
>> > >> > >>> Here's instructions for that:
>> > >> > >>>
http://www.dtcenter.org/met/users/support/met_help.php#ftp
>> > >> > >>>
>> > >> > >>> Thanks,
>> > >> > >>> John
>> > >> > >>>
>> > >> > >>>
>> > >> > >>>
>> > >> > >>> On Thu, Apr 20, 2017 at 2:10 PM, Michael Erickson - NOAA
>> Affiliate
>> > >> via
>> > >> > >>> RT <
>> > >> > >>> met_help at ucar.edu> wrote:
>> > >> > >>>
>> > >> > >>> >
>> > >> > >>> > Thu Apr 20 14:10:51 2017: Request 80226 was acted
upon.
>> > >> > >>> > Transaction: Ticket created by
michael.j.erickson at noaa.gov
>> > >> > >>> > Queue: met_help
>> > >> > >>> > Subject: Grib2 Table Issue at WPC
>> > >> > >>> > Owner: Nobody
>> > >> > >>> > Requestors: michael.j.erickson at noaa.gov
>> > >> > >>> > Status: new
>> > >> > >>> > Ticket <URL: https://rt.rap.ucar.edu/rt/
>> > >> > Ticket/Display.html?id=80226
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> > Good afternoon,
>> > >> > >>> >
>> > >> > >>> > I am testing the newest version of METv6.0 installed
by NCO
>> at
>> > WPC
>> > >> > >>> with the
>> > >> > >>> > aid of John Halley Gotway.
>> > >> > >>> >
>> > >> > >>> > I noticed some odd warnings when using pcp_combine to
sum
>> > >> > >>> precipitation and
>> > >> > >>> > convert grib2 to netcdf. They are listed below:
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>> > */opt/MET6/met6.0/bin/pcp_combine -sum 00000000_000000
1
>> > >> > >>> 20160623_010000
>> > >> > >>> > 01
>> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
>> > >> _preacc_1_MTDdaily/
>> > >> > ST4_lag00.nc
>> > >> > >>> > -pcpdir /usr1/wpc_cpgffh/gribs//temp/2016062300
>> > >> <(201)%20606-2300>_preacc_1_MTDdaily/WA
>> > >> > >>> RNING:
>> > >> > >>> > WARNING: Multiple GRIB2 table entries match lookup
criteria
>> > >> > (parm_name
>> > >> > >>> =
>> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0,
grib2_mtab =
>> 1,
>> > >> > >>> grib2_cntr =
>> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
>> parm_name:
>> > >> > APCP,
>> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57,
grib2_ltab =
>> 0,
>> > >> > index_b
>> > >> > >>> = 1,
>> > >> > >>> > index_c = 8WARNING: parm_name: APCP, index_a = 0,
>> grib2_mtab =
>> > >> 14,
>> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c
=
>> > 8WARNING:
>> > >> > >>> Using:
>> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1,
grib2_cntr = 0,
>> > >> > >>> grib2_ltab =
>> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: [1] File
>> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
>> <(201)%20606-2300>
>> > >> > >>> _preacc_1_MTDdaily//
>> > >> > >>> > ST4.2016062301 <(201)%20606-2301> <(201)%20606-
2301>.01h
>> > >> > >>> > matches valid time of 20160623_010000DEBUG 1: [1]
Reading
>> input
>> > >> file:
>> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
>> _preacc_1_MTDdaily//
>> > >> > >>> > ST4.2016062301 <(201)%20606-2301>.01hWARNING:
>> > >> > >>> > WARNING: Multiple GRIB2 table entries match lookup
criteria
>> > >> > (parm_name
>> > >> > >>> =
>> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0,
grib2_mtab =
>> 1,
>> > >> > >>> grib2_cntr =
>> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
>> parm_name:
>> > >> > APCP,
>> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57,
grib2_ltab =
>> 0,
>> > >> > index_b
>> > >> > >>> = 1,
>> > >> > >>> > index_c = 8WARNING: parm_name: APCP, index_a = 0,
>> grib2_mtab =
>> > >> 14,
>> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1, index_c
=
>> > 8WARNING:
>> > >> > >>> Using:
>> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1,
grib2_cntr = 0,
>> > >> > >>> grib2_ltab =
>> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: Writing
output
>> > file:
>> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
>> > >> _preacc_1_MTDdaily/
>> > >> > ST4_lag00.nc
>> > >> > >>> *
>> > >> > >>> >
>> > >> > >>> > The resulting file, ST4_lag00.nc contains data, but is
not
>> > >> readable
>> > >> > >>> when
>> > >> > >>> > using the 'ncdump' command or when running 'mtd.' Note
that
>> the
>> > >> same
>> > >> > >>> > commands work when using METv5.1. This appears to be
an issue
>> > with
>> > >> > the
>> > >> > >>> > grib2 tables, but I wanted to be sure.
>> > >> > >>> >
>> > >> > >>> > Thank you for your help.
>> > >> > >>> >
>> > >> > >>> > Mike
>> > >> > >>> >
>> > >> > >>> > --
>> > >> > >>> >
>> > >> > >>> > Michael J. Erickson, Ph.D
>> > >> > >>> > Cooperative Institute for Research in Environmental
Sciences
>> > >> (CIRES)
>> > >> > >>> > CIRES Contractor for the Weather Prediction Center
(WPC)
>> > >> > >>> >
>> > >> > >>> > Phone: 301-683-1546 <(301)%20683-1546>
>> > >> > >>> >
>> > >> > >>> >
>> > >> > >>>
>> > >> > >>>
>> > >> > >>
>> > >> > >>
>> > >> > >> --
>> > >> > >>
>> > >> > >> Michael J. Erickson, Ph.D
>> > >> > >> Cooperative Institute for Research in Environmental
Sciences
>> > (CIRES)
>> > >> > >> CIRES Contractor for the Weather Prediction Center (WPC)
>> > >> > >>
>> > >> > >> Phone: 301-683-1546 <(301)%20683-1546>
>> > >> > >>
>> > >> > >>
>> > >> > >
>> > >> > >
>> > >> > > --
>> > >> > >
>> > >> > > Michael J. Erickson, Ph.D
>> > >> > > Cooperative Institute for Research in Environmental
Sciences
>> (CIRES)
>> > >> > > CIRES Contractor for the Weather Prediction Center (WPC)
>> > >> > >
>> > >> > > Phone: 301-683-1546 <(301)%20683-1546>
>> > >> > >
>> > >> > >
>> > >> >
>> > >> >
>> > >> > --
>> > >> >
>> > >> > Michael J. Erickson, Ph.D
>> > >> > Cooperative Institute for Research in Environmental Sciences
>> (CIRES)
>> > >> > CIRES Contractor for the Weather Prediction Center (WPC)
>> > >> >
>> > >> > Phone: 301-683-1546
>> > >> >
>> > >> >
>> > >>
>> > >>
>> > >
>> > >
>> > > --
>> > >
>> > > Michael J. Erickson, Ph.D
>> > > Cooperative Institute for Research in Environmental Sciences
(CIRES)
>> > > CIRES Contractor for the Weather Prediction Center (WPC)
>> > >
>> > > Phone: 301-683-1546 <(301)%20683-1546>
>> > >
>> > >
>> >
>> >
>> > --
>> >
>> > Michael J. Erickson, Ph.D
>> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
>> > CIRES Contractor for the Weather Prediction Center (WPC)
>> >
>> > Phone: 301-683-1546
>> >
>> >
>>
>>
>
>
> --
>
> Michael J. Erickson, Ph.D
> Cooperative Institute for Research in Environmental Sciences (CIRES)
> CIRES Contractor for the Weather Prediction Center (WPC)
>
> Phone: 301-683-1546 <(301)%20683-1546>
>
>
--
Michael J. Erickson, Ph.D
Cooperative Institute for Research in Environmental Sciences (CIRES)
CIRES Contractor for the Weather Prediction Center (WPC)
Phone: 301-683-1546
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: John Halley Gotway
Time: Fri Apr 21 14:38:37 2017
Mike,
If you haven't already, please try putting that in the first position:
setenv LD_LIBRARY_PATH /opt/MET6/external_libs:${LD_LIBRARY_PATH}
The linker searches those paths in order. Does that change anything?
Thanks,
John
On Fri, Apr 21, 2017 at 2:28 PM, Michael Erickson - NOAA Affiliate via
RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
>
> I believe the directory you're referring to is:
> /opt/MET6/external_libs/bin/. I've added that to LD_LIBRARY_PATH,
but it
> still errors.
>
> Mike
>
> On Fri, Apr 21, 2017 at 8:12 PM, Michael Erickson - NOAA Affiliate <
> michael.j.erickson at noaa.gov> wrote:
>
> > Thanks John,
> >
> > To answer your first question:
> >
> >
> >
> >
> > *echo
> > $LD_LIBRARY_PATH/lib:/export-5/ncosrvnfs-cp/nawips2/os/
> linux2.6.32_x86_64/lib:/usr/lib:/usr/lib64:/opt/MET6/
> external_libs:/opt/MET6/external_libs/lib:/usr/lib64/openmpi/lib/*
> > To answer your second:
> >
> >
> >
> >
> > *grep MET_NETCDF /opt/MET6/met6.0/config.loggrep:
> > /opt/MET6/met6.0/config.log: No such file or directory*
> > However, MET_NETCDF is set to /opt/MET6/external_libs
> >
> > Hope that helps,
> >
> > Mike
> >
> > On Fri, Apr 21, 2017 at 6:23 PM, John Halley Gotway via RT <
> > met_help at ucar.edu> wrote:
> >
> >> Mike,
> >>
> >> This looks to me like an issue with the environment. I think
these sort
> >> of
> >> issues are inevitable as we switch from using NetCDF3 to NetCDF4.
> NetCDF4
> >> is built upon HDF5, so generally, you can interpret HDF5 errors
as being
> >> problems with NetCDF.
> >>
> >> On theia, wcoss, and HPC machines as NCAR, we've begun using
modulefiles
> >> (i.e. module load met/6.0) and those files set up the environment
in the
> >> required way. But lacking that, we should just check how you
have
> >> LD_LIBRARY_PATH set:
> >>
> >> echo $LD_LIBRARY_PATH
> >>
> >> That environment variables needs to include the directories
containing
> the
> >> NetCDF and HDF5 libraries (usually, I've seen them placed into
the same
> >> directory).
> >>
> >> Try running:
> >> grep MET_NETCDF /opt/MET6/met6.0/config.log
> >>
> >> Hopefully, that'll tell us where the NetCDF library used to
compile MET
> >> actually lives on your system.
> >>
> >> Thanks,
> >> John
> >>
> >>
> >>
> >> On Fri, Apr 21, 2017 at 12:15 PM, Michael Erickson - NOAA
Affiliate via
> >> RT <
> >> met_help at ucar.edu> wrote:
> >>
> >> >
> >> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> >> >
> >> > Hi All,
> >> >
> >> > I tried doing a similar thing with MODE. Similar to MTD,
pcp_combine
> and
> >> > regrid_data_plan are run first. The error is below:
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> > */opt/MET6/met6.0/bin/mode
> >> > /usr1/wpc_cpgffh/gribs//temp/2016062300_
> preacc_6_MODEdaily/HRRRv3_TLE_
> >> > lag06_f6.nc
> >> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> >> > HRRRv3_TLE_lag06_f6.nc
> >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_USE_
> >> SAMP_f24_p6_t0.5
> >> > -outdir /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> >> _preacc_6_MODEdailyDEBUG 1:
> >> > Default Config File:
> >> > /opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG 1:
Match
> >> Config
> >> > File:
> >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> >> > USE_SAMP_f24_p6_t0.5DEBUG
> >> > 1: Merge Config File:
> >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> >> > USE_SAMP_f24_p6_t0.5DEBUG
> >> > 1: Forecast File:
> >> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
> >> _preacc_6_MODEdaily/
> >> > HRRRv3_TLE_lag06_f6.ncDEBUG
> >> > 1: Observation File:
> >> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
> >> _preacc_6_MODEdaily/
> >> > HRRRv3_TLE_lag06_f6.ncERROR
> >> > : ERROR : setup_fcst_obs_data() -> can't get data from file
> >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> >> > HRRRv3_TLE_lag06_f6.nc"ERROR
> >> > : HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0:
#000:
> >> H5T.c
> >> > line 1723 in H5Tclose(): not a datatype major: Invalid
arguments to
> >> > routine minor: Inappropriate typeNetCDF: HDF errorfile:
ncFile.cpp
> >> > line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread
0:
> >> #000:
> >> > H5T.c line 1723 in H5Tclose(): not a datatype major: Invalid
> >> arguments
> >> > to routine minor: Inappropriate typeNetCDF: HDF errorfile:
> ncFile.cpp
> >> > line:33*
> >> > Looks to be HDF related. Thanks!
> >> >
> >> > Mike
> >> >
> >> >
> >> > On Fri, Apr 21, 2017 at 1:58 PM, Michael Erickson - NOAA
Affiliate <
> >> > michael.j.erickson at noaa.gov> wrote:
> >> >
> >> > > Thanks Tara!
> >> > >
> >> > > On Fri, Apr 21, 2017 at 1:45 PM, Tara Jensen via RT <
> >> met_help at ucar.edu>
> >> > > wrote:
> >> > >
> >> > >> John, I'll grab the data in a little bit and put it on
dakota.
> >> > >>
> >> > >> Cheers, Tara
> >> > >>
> >> > >> On Apr 21, 2017 7:22 AM, "Michael Erickson - NOAA Affiliate
via
> RT" <
> >> > >> met_help at ucar.edu> wrote:
> >> > >>
> >> > >> >
> >> > >> > <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> >> > >> >
> >> > >> > Hi John,
> >> > >> >
> >> > >> > To explain my problem better...my code is able to run
METv5.1 but
> >> not
> >> > >> > METv6.0. The exe files used are 'pcp_combine',
> 'regrid_data_plane'
> >> and
> >> > >> then
> >> > >> > 'mtd,' In METv6.0 'pcp_combine' converts grib2 to netcdf,
but
> with
> >> the
> >> > >> > warnings mentioned earlier and with netcdf files that are
not
> >> readable
> >> > >> by
> >> > >> > ncdump. 'regrid_data_plane' also works, but 'mtd' does
not. The
> >> error
> >> > >> with
> >> > >> > 'mtd' is shown below, but I've found this mtd error output
occurs
> >> even
> >> > >> if
> >> > >> > the issue is something else. In this case, I believe mtd
is
> unable
> >> to
> >> > >> read
> >> > >> > the netcdf file.
> >> > >> >
> >> > >> > Unfortunately I don't have access to theia. I'm not sure
how I
> can
> >> > give
> >> > >> you
> >> > >> > the files. I do not have ftp, the sftp command fails, and
the scp
> >> > >> command
> >> > >> > may work but I can not create my own folder on your server
a
> >> priori. I
> >> > >> > shared some data with Tara over google drive through her
noaa
> >> account.
> >> > >> It
> >> > >> > contains forecast hours 1-6 of a sample "model" and
"observation"
> >> > >> created
> >> > >> > using METv6.0. This is after 'pcp_combine' and
> 'regrid_data_plane'
> >> > were
> >> > >> > run, but before 'mtd.'
> >> > >> >
> >> > >> > Thanks for your help and sorry for the round about way of
sharing
> >> > data.
> >> > >> >
> >> > >> >
> >> > >> >
> >> > >> >
> >> > >> >
> >> > >> >
> >> > >> > *DEBUG 2: mtd_read_data() -> processing file
> >> > >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> >> _preacc_1_MTDdaily/
> >> > >> > HRRRv3_TLE_lag06_f1.nc"ERROR
> >> > >> > : ERROR : ERROR : mtd_read_data() -> unable to get
data plane
> >> at
> >> > >> time
> >> > >> > 0ERROR : *
> >> > >> >
> >> > >> > Mike
> >> > >> >
> >> > >> > On Fri, Apr 21, 2017 at 12:06 PM, Michael Erickson - NOAA
> >> Affiliate <
> >> > >> > michael.j.erickson at noaa.gov> wrote:
> >> > >> >
> >> > >> > > Hi John,
> >> > >> > >
> >> > >> > > Lets see if this works.
> >> > >> > >
> >> > >> > > Mike
> >> > >> > >
> >> > >> > > On Thu, Apr 20, 2017 at 8:31 PM, Michael Erickson - NOAA
> >> Affiliate <
> >> > >> > > michael.j.erickson at noaa.gov> wrote:
> >> > >> > >
> >> > >> > >> Hi John,
> >> > >> > >>
> >> > >> > >> Thank you for your helpful response. Unfortunately, I
do not
> >> have
> >> > >> ftp on
> >> > >> > >> my linux system. Would you mind if I attached the file
here?
> >> > >> > >>
> >> > >> > >> Mike
> >> > >> > >>
> >> > >> > >> On Thu, Apr 20, 2017 at 8:17 PM, John Halley Gotway via
RT <
> >> > >> > >> met_help at ucar.edu> wrote:
> >> > >> > >>
> >> > >> > >>> Mike,
> >> > >> > >>>
> >> > >> > >>> We just posted the first set of bugfixes for met-6.0
here:
> >> > >> > >>>
http://www.dtcenter.org/met/users/support/known_issues/
> >> > >> > METv6.0/index.php
> >> > >> > >>>
> >> > >> > >>> One of them changes those warnings to debug(3) level
messages
> >> > >> instead.
> >> > >> > >>>
> >> > >> > >>> Basically, we realized the logic for when/how to do
GRIB
> table
> >> > >> lookups
> >> > >> > >>> differs in the MET library code for GRIB1 and GRIB2.
We
> >> > considered
> >> > >> > using
> >> > >> > >>> the patch to make it consistent, but decided that that
was
> too
> >> big
> >> > >> of a
> >> > >> > >>> change and had the potential of introducing more bugs.
> >> Instead,
> >> > >> we'll
> >> > >> > >>> make
> >> > >> > >>> it consistent in version 6.1. The easier choice was
just
> >> > >> downgrading
> >> > >> > >>> that
> >> > >> > >>> warning.
> >> > >> > >>>
> >> > >> > >>> Ultimately though, the bigger concern is the output of
> >> > pcp_combine.
> >> > >> > MET
> >> > >> > >>> version 6.0 includes a major change from NetCDF3 to
NetCDF4.
> >> But
> >> > of
> >> > >> > >>> course, the other MET tools should be able to read it.
> >> > >> > >>>
> >> > >> > >>> You could post that output file to our anonymous ftp
site
> and I
> >> > >> could
> >> > >> > >>> take
> >> > >> > >>> a look:
> >> > >> > >>> /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> >> <(201)%20606-2300>
> >> > >> > >>> _preacc_1_MTDdaily/ST4_lag00.nc
> >> > >> > >>>
> >> > >> > >>> Here's instructions for that:
> >> > >> > >>>
http://www.dtcenter.org/met/users/support/met_help.php#ftp
> >> > >> > >>>
> >> > >> > >>> Thanks,
> >> > >> > >>> John
> >> > >> > >>>
> >> > >> > >>>
> >> > >> > >>>
> >> > >> > >>> On Thu, Apr 20, 2017 at 2:10 PM, Michael Erickson -
NOAA
> >> Affiliate
> >> > >> via
> >> > >> > >>> RT <
> >> > >> > >>> met_help at ucar.edu> wrote:
> >> > >> > >>>
> >> > >> > >>> >
> >> > >> > >>> > Thu Apr 20 14:10:51 2017: Request 80226 was acted
upon.
> >> > >> > >>> > Transaction: Ticket created by
michael.j.erickson at noaa.gov
> >> > >> > >>> > Queue: met_help
> >> > >> > >>> > Subject: Grib2 Table Issue at WPC
> >> > >> > >>> > Owner: Nobody
> >> > >> > >>> > Requestors: michael.j.erickson at noaa.gov
> >> > >> > >>> > Status: new
> >> > >> > >>> > Ticket <URL: https://rt.rap.ucar.edu/rt/
> >> > >> > Ticket/Display.html?id=80226
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> > Good afternoon,
> >> > >> > >>> >
> >> > >> > >>> > I am testing the newest version of METv6.0 installed
by NCO
> >> at
> >> > WPC
> >> > >> > >>> with the
> >> > >> > >>> > aid of John Halley Gotway.
> >> > >> > >>> >
> >> > >> > >>> > I noticed some odd warnings when using pcp_combine
to sum
> >> > >> > >>> precipitation and
> >> > >> > >>> > convert grib2 to netcdf. They are listed below:
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>> > */opt/MET6/met6.0/bin/pcp_combine -sum
00000000_000000 1
> >> > >> > >>> 20160623_010000
> >> > >> > >>> > 01
> >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
<(201)%20606-2300>
> >> > >> _preacc_1_MTDdaily/
> >> > >> > ST4_lag00.nc
> >> > >> > >>> > -pcpdir /usr1/wpc_cpgffh/gribs//temp/2016062300
> >> > >> <(201)%20606-2300>_preacc_1_MTDdaily/WA
> >> > >> > >>> RNING:
> >> > >> > >>> > WARNING: Multiple GRIB2 table entries match lookup
criteria
> >> > >> > (parm_name
> >> > >> > >>> =
> >> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0,
grib2_mtab =
> >> 1,
> >> > >> > >>> grib2_cntr =
> >> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
> >> parm_name:
> >> > >> > APCP,
> >> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57,
grib2_ltab =
> >> 0,
> >> > >> > index_b
> >> > >> > >>> = 1,
> >> > >> > >>> > index_c = 8WARNING: parm_name: APCP, index_a = 0,
> >> grib2_mtab =
> >> > >> 14,
> >> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1,
index_c =
> >> > 8WARNING:
> >> > >> > >>> Using:
> >> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1,
grib2_cntr =
> 0,
> >> > >> > >>> grib2_ltab =
> >> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: [1]
File
> >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
<(201)%20606-2300>
> >> <(201)%20606-2300>
> >> > >> > >>> _preacc_1_MTDdaily//
> >> > >> > >>> > ST4.2016062301 <(201)%20606-2301> <(201)%20606-
2301>.01h
> >> > >> > >>> > matches valid time of 20160623_010000DEBUG 1: [1]
Reading
> >> input
> >> > >> file:
> >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
<(201)%20606-2300>
> >> _preacc_1_MTDdaily//
> >> > >> > >>> > ST4.2016062301 <(201)%20606-2301>.01hWARNING:
> >> > >> > >>> > WARNING: Multiple GRIB2 table entries match lookup
criteria
> >> > >> > (parm_name
> >> > >> > >>> =
> >> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0,
grib2_mtab =
> >> 1,
> >> > >> > >>> grib2_cntr =
> >> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c = 8WARNING:
> >> parm_name:
> >> > >> > APCP,
> >> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57,
grib2_ltab =
> >> 0,
> >> > >> > index_b
> >> > >> > >>> = 1,
> >> > >> > >>> > index_c = 8WARNING: parm_name: APCP, index_a = 0,
> >> grib2_mtab =
> >> > >> 14,
> >> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1,
index_c =
> >> > 8WARNING:
> >> > >> > >>> Using:
> >> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1,
grib2_cntr =
> 0,
> >> > >> > >>> grib2_ltab =
> >> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: Writing
output
> >> > file:
> >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
<(201)%20606-2300>
> >> > >> _preacc_1_MTDdaily/
> >> > >> > ST4_lag00.nc
> >> > >> > >>> *
> >> > >> > >>> >
> >> > >> > >>> > The resulting file, ST4_lag00.nc contains data, but
is not
> >> > >> readable
> >> > >> > >>> when
> >> > >> > >>> > using the 'ncdump' command or when running 'mtd.'
Note that
> >> the
> >> > >> same
> >> > >> > >>> > commands work when using METv5.1. This appears to be
an
> issue
> >> > with
> >> > >> > the
> >> > >> > >>> > grib2 tables, but I wanted to be sure.
> >> > >> > >>> >
> >> > >> > >>> > Thank you for your help.
> >> > >> > >>> >
> >> > >> > >>> > Mike
> >> > >> > >>> >
> >> > >> > >>> > --
> >> > >> > >>> >
> >> > >> > >>> > Michael J. Erickson, Ph.D
> >> > >> > >>> > Cooperative Institute for Research in Environmental
> Sciences
> >> > >> (CIRES)
> >> > >> > >>> > CIRES Contractor for the Weather Prediction Center
(WPC)
> >> > >> > >>> >
> >> > >> > >>> > Phone: 301-683-1546 <(301)%20683-1546>
> >> > >> > >>> >
> >> > >> > >>> >
> >> > >> > >>>
> >> > >> > >>>
> >> > >> > >>
> >> > >> > >>
> >> > >> > >> --
> >> > >> > >>
> >> > >> > >> Michael J. Erickson, Ph.D
> >> > >> > >> Cooperative Institute for Research in Environmental
Sciences
> >> > (CIRES)
> >> > >> > >> CIRES Contractor for the Weather Prediction Center
(WPC)
> >> > >> > >>
> >> > >> > >> Phone: 301-683-1546 <(301)%20683-1546>
> >> > >> > >>
> >> > >> > >>
> >> > >> > >
> >> > >> > >
> >> > >> > > --
> >> > >> > >
> >> > >> > > Michael J. Erickson, Ph.D
> >> > >> > > Cooperative Institute for Research in Environmental
Sciences
> >> (CIRES)
> >> > >> > > CIRES Contractor for the Weather Prediction Center (WPC)
> >> > >> > >
> >> > >> > > Phone: 301-683-1546 <(301)%20683-1546>
> >> > >> > >
> >> > >> > >
> >> > >> >
> >> > >> >
> >> > >> > --
> >> > >> >
> >> > >> > Michael J. Erickson, Ph.D
> >> > >> > Cooperative Institute for Research in Environmental
Sciences
> >> (CIRES)
> >> > >> > CIRES Contractor for the Weather Prediction Center (WPC)
> >> > >> >
> >> > >> > Phone: 301-683-1546
> >> > >> >
> >> > >> >
> >> > >>
> >> > >>
> >> > >
> >> > >
> >> > > --
> >> > >
> >> > > Michael J. Erickson, Ph.D
> >> > > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> >> > > CIRES Contractor for the Weather Prediction Center (WPC)
> >> > >
> >> > > Phone: 301-683-1546 <(301)%20683-1546>
> >> > >
> >> > >
> >> >
> >> >
> >> > --
> >> >
> >> > Michael J. Erickson, Ph.D
> >> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> >> > CIRES Contractor for the Weather Prediction Center (WPC)
> >> >
> >> > Phone: 301-683-1546
> >> >
> >> >
> >>
> >>
> >
> >
> > --
> >
> > Michael J. Erickson, Ph.D
> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > CIRES Contractor for the Weather Prediction Center (WPC)
> >
> > Phone: 301-683-1546 <(301)%20683-1546>
> >
> >
>
>
> --
>
> Michael J. Erickson, Ph.D
> Cooperative Institute for Research in Environmental Sciences (CIRES)
> CIRES Contractor for the Weather Prediction Center (WPC)
>
> Phone: 301-683-1546
>
>
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: Michael Erickson - NOAA Affiliate
Time: Fri Apr 21 14:48:18 2017
Thanks John,
I've removed all other instances of LD_LIBRARY_PATH other than the one
you
specified. I get:
*/opt/MET6/met6.0/bin/pcp_combine: error while loading shared
libraries:
libnetcdf_c++4.so.1: cannot open shared object file: No such file or
directory*
This error has been encountered occasionally. Should I try linking to
a
netcdf library on my local machine?
Mike
On Fri, Apr 21, 2017 at 8:38 PM, John Halley Gotway via RT <
met_help at ucar.edu> wrote:
> Mike,
>
> If you haven't already, please try putting that in the first
position:
> setenv LD_LIBRARY_PATH /opt/MET6/external_libs:${LD_LIBRARY_PATH}
>
> The linker searches those paths in order. Does that change
anything?
>
> Thanks,
> John
>
> On Fri, Apr 21, 2017 at 2:28 PM, Michael Erickson - NOAA Affiliate
via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> >
> > I believe the directory you're referring to is:
> > /opt/MET6/external_libs/bin/. I've added that to LD_LIBRARY_PATH,
but it
> > still errors.
> >
> > Mike
> >
> > On Fri, Apr 21, 2017 at 8:12 PM, Michael Erickson - NOAA Affiliate
<
> > michael.j.erickson at noaa.gov> wrote:
> >
> > > Thanks John,
> > >
> > > To answer your first question:
> > >
> > >
> > >
> > >
> > > *echo
> > > $LD_LIBRARY_PATH/lib:/export-5/ncosrvnfs-cp/nawips2/os/
> > linux2.6.32_x86_64/lib:/usr/lib:/usr/lib64:/opt/MET6/
> > external_libs:/opt/MET6/external_libs/lib:/usr/lib64/openmpi/lib/*
> > > To answer your second:
> > >
> > >
> > >
> > >
> > > *grep MET_NETCDF /opt/MET6/met6.0/config.loggrep:
> > > /opt/MET6/met6.0/config.log: No such file or directory*
> > > However, MET_NETCDF is set to /opt/MET6/external_libs
> > >
> > > Hope that helps,
> > >
> > > Mike
> > >
> > > On Fri, Apr 21, 2017 at 6:23 PM, John Halley Gotway via RT <
> > > met_help at ucar.edu> wrote:
> > >
> > >> Mike,
> > >>
> > >> This looks to me like an issue with the environment. I think
these
> sort
> > >> of
> > >> issues are inevitable as we switch from using NetCDF3 to
NetCDF4.
> > NetCDF4
> > >> is built upon HDF5, so generally, you can interpret HDF5 errors
as
> being
> > >> problems with NetCDF.
> > >>
> > >> On theia, wcoss, and HPC machines as NCAR, we've begun using
> modulefiles
> > >> (i.e. module load met/6.0) and those files set up the
environment in
> the
> > >> required way. But lacking that, we should just check how you
have
> > >> LD_LIBRARY_PATH set:
> > >>
> > >> echo $LD_LIBRARY_PATH
> > >>
> > >> That environment variables needs to include the directories
containing
> > the
> > >> NetCDF and HDF5 libraries (usually, I've seen them placed into
the
> same
> > >> directory).
> > >>
> > >> Try running:
> > >> grep MET_NETCDF /opt/MET6/met6.0/config.log
> > >>
> > >> Hopefully, that'll tell us where the NetCDF library used to
compile
> MET
> > >> actually lives on your system.
> > >>
> > >> Thanks,
> > >> John
> > >>
> > >>
> > >>
> > >> On Fri, Apr 21, 2017 at 12:15 PM, Michael Erickson - NOAA
Affiliate
> via
> > >> RT <
> > >> met_help at ucar.edu> wrote:
> > >>
> > >> >
> > >> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226
>
> > >> >
> > >> > Hi All,
> > >> >
> > >> > I tried doing a similar thing with MODE. Similar to MTD,
pcp_combine
> > and
> > >> > regrid_data_plan are run first. The error is below:
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> >
> > >> > */opt/MET6/met6.0/bin/mode
> > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300_
> > preacc_6_MODEdaily/HRRRv3_TLE_
> > >> > lag06_f6.nc
> > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> > >> > HRRRv3_TLE_lag06_f6.nc
> > >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_USE_
> > >> SAMP_f24_p6_t0.5
> > >> > -outdir /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> > >> _preacc_6_MODEdailyDEBUG 1:
> > >> > Default Config File:
> > >> > /opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG 1:
Match
> > >> Config
> > >> > File:
> > >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> > >> > USE_SAMP_f24_p6_t0.5DEBUG
> > >> > 1: Merge Config File:
> > >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> > >> > USE_SAMP_f24_p6_t0.5DEBUG
> > >> > 1: Forecast File:
> > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
> > >> _preacc_6_MODEdaily/
> > >> > HRRRv3_TLE_lag06_f6.ncDEBUG
> > >> > 1: Observation File:
> > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
> > >> _preacc_6_MODEdaily/
> > >> > HRRRv3_TLE_lag06_f6.ncERROR
> > >> > : ERROR : setup_fcst_obs_data() -> can't get data from file
> > >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> > >> > HRRRv3_TLE_lag06_f6.nc"ERROR
> > >> > : HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0:
#000:
> > >> H5T.c
> > >> > line 1723 in H5Tclose(): not a datatype major: Invalid
arguments
> to
> > >> > routine minor: Inappropriate typeNetCDF: HDF errorfile:
> ncFile.cpp
> > >> > line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1)
thread 0:
> > >> #000:
> > >> > H5T.c line 1723 in H5Tclose(): not a datatype major:
Invalid
> > >> arguments
> > >> > to routine minor: Inappropriate typeNetCDF: HDF errorfile:
> > ncFile.cpp
> > >> > line:33*
> > >> > Looks to be HDF related. Thanks!
> > >> >
> > >> > Mike
> > >> >
> > >> >
> > >> > On Fri, Apr 21, 2017 at 1:58 PM, Michael Erickson - NOAA
Affiliate <
> > >> > michael.j.erickson at noaa.gov> wrote:
> > >> >
> > >> > > Thanks Tara!
> > >> > >
> > >> > > On Fri, Apr 21, 2017 at 1:45 PM, Tara Jensen via RT <
> > >> met_help at ucar.edu>
> > >> > > wrote:
> > >> > >
> > >> > >> John, I'll grab the data in a little bit and put it on
dakota.
> > >> > >>
> > >> > >> Cheers, Tara
> > >> > >>
> > >> > >> On Apr 21, 2017 7:22 AM, "Michael Erickson - NOAA
Affiliate via
> > RT" <
> > >> > >> met_help at ucar.edu> wrote:
> > >> > >>
> > >> > >> >
> > >> > >> > <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226
> >
> > >> > >> >
> > >> > >> > Hi John,
> > >> > >> >
> > >> > >> > To explain my problem better...my code is able to run
METv5.1
> but
> > >> not
> > >> > >> > METv6.0. The exe files used are 'pcp_combine',
> > 'regrid_data_plane'
> > >> and
> > >> > >> then
> > >> > >> > 'mtd,' In METv6.0 'pcp_combine' converts grib2 to
netcdf, but
> > with
> > >> the
> > >> > >> > warnings mentioned earlier and with netcdf files that
are not
> > >> readable
> > >> > >> by
> > >> > >> > ncdump. 'regrid_data_plane' also works, but 'mtd' does
not. The
> > >> error
> > >> > >> with
> > >> > >> > 'mtd' is shown below, but I've found this mtd error
output
> occurs
> > >> even
> > >> > >> if
> > >> > >> > the issue is something else. In this case, I believe mtd
is
> > unable
> > >> to
> > >> > >> read
> > >> > >> > the netcdf file.
> > >> > >> >
> > >> > >> > Unfortunately I don't have access to theia. I'm not sure
how I
> > can
> > >> > give
> > >> > >> you
> > >> > >> > the files. I do not have ftp, the sftp command fails,
and the
> scp
> > >> > >> command
> > >> > >> > may work but I can not create my own folder on your
server a
> > >> priori. I
> > >> > >> > shared some data with Tara over google drive through her
noaa
> > >> account.
> > >> > >> It
> > >> > >> > contains forecast hours 1-6 of a sample "model" and
> "observation"
> > >> > >> created
> > >> > >> > using METv6.0. This is after 'pcp_combine' and
> > 'regrid_data_plane'
> > >> > were
> > >> > >> > run, but before 'mtd.'
> > >> > >> >
> > >> > >> > Thanks for your help and sorry for the round about way
of
> sharing
> > >> > data.
> > >> > >> >
> > >> > >> >
> > >> > >> >
> > >> > >> >
> > >> > >> >
> > >> > >> >
> > >> > >> > *DEBUG 2: mtd_read_data() -> processing file
> > >> > >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> > >> _preacc_1_MTDdaily/
> > >> > >> > HRRRv3_TLE_lag06_f1.nc"ERROR
> > >> > >> > : ERROR : ERROR : mtd_read_data() -> unable to get
data
> plane
> > >> at
> > >> > >> time
> > >> > >> > 0ERROR : *
> > >> > >> >
> > >> > >> > Mike
> > >> > >> >
> > >> > >> > On Fri, Apr 21, 2017 at 12:06 PM, Michael Erickson -
NOAA
> > >> Affiliate <
> > >> > >> > michael.j.erickson at noaa.gov> wrote:
> > >> > >> >
> > >> > >> > > Hi John,
> > >> > >> > >
> > >> > >> > > Lets see if this works.
> > >> > >> > >
> > >> > >> > > Mike
> > >> > >> > >
> > >> > >> > > On Thu, Apr 20, 2017 at 8:31 PM, Michael Erickson -
NOAA
> > >> Affiliate <
> > >> > >> > > michael.j.erickson at noaa.gov> wrote:
> > >> > >> > >
> > >> > >> > >> Hi John,
> > >> > >> > >>
> > >> > >> > >> Thank you for your helpful response. Unfortunately, I
do not
> > >> have
> > >> > >> ftp on
> > >> > >> > >> my linux system. Would you mind if I attached the
file here?
> > >> > >> > >>
> > >> > >> > >> Mike
> > >> > >> > >>
> > >> > >> > >> On Thu, Apr 20, 2017 at 8:17 PM, John Halley Gotway
via RT <
> > >> > >> > >> met_help at ucar.edu> wrote:
> > >> > >> > >>
> > >> > >> > >>> Mike,
> > >> > >> > >>>
> > >> > >> > >>> We just posted the first set of bugfixes for met-6.0
here:
> > >> > >> > >>>
http://www.dtcenter.org/met/users/support/known_issues/
> > >> > >> > METv6.0/index.php
> > >> > >> > >>>
> > >> > >> > >>> One of them changes those warnings to debug(3) level
> messages
> > >> > >> instead.
> > >> > >> > >>>
> > >> > >> > >>> Basically, we realized the logic for when/how to do
GRIB
> > table
> > >> > >> lookups
> > >> > >> > >>> differs in the MET library code for GRIB1 and GRIB2.
We
> > >> > considered
> > >> > >> > using
> > >> > >> > >>> the patch to make it consistent, but decided that
that was
> > too
> > >> big
> > >> > >> of a
> > >> > >> > >>> change and had the potential of introducing more
bugs.
> > >> Instead,
> > >> > >> we'll
> > >> > >> > >>> make
> > >> > >> > >>> it consistent in version 6.1. The easier choice was
just
> > >> > >> downgrading
> > >> > >> > >>> that
> > >> > >> > >>> warning.
> > >> > >> > >>>
> > >> > >> > >>> Ultimately though, the bigger concern is the output
of
> > >> > pcp_combine.
> > >> > >> > MET
> > >> > >> > >>> version 6.0 includes a major change from NetCDF3 to
> NetCDF4.
> > >> But
> > >> > of
> > >> > >> > >>> course, the other MET tools should be able to read
it.
> > >> > >> > >>>
> > >> > >> > >>> You could post that output file to our anonymous ftp
site
> > and I
> > >> > >> could
> > >> > >> > >>> take
> > >> > >> > >>> a look:
> > >> > >> > >>> /usr1/wpc_cpgffh/gribs//temp/2016062300
<(201)%20606-2300>
> > >> <(201)%20606-2300>
> > >> > >> > >>> _preacc_1_MTDdaily/ST4_lag00.nc
> > >> > >> > >>>
> > >> > >> > >>> Here's instructions for that:
> > >> > >> > >>>
http://www.dtcenter.org/met/users/support/met_help.php#ftp
> > >> > >> > >>>
> > >> > >> > >>> Thanks,
> > >> > >> > >>> John
> > >> > >> > >>>
> > >> > >> > >>>
> > >> > >> > >>>
> > >> > >> > >>> On Thu, Apr 20, 2017 at 2:10 PM, Michael Erickson -
NOAA
> > >> Affiliate
> > >> > >> via
> > >> > >> > >>> RT <
> > >> > >> > >>> met_help at ucar.edu> wrote:
> > >> > >> > >>>
> > >> > >> > >>> >
> > >> > >> > >>> > Thu Apr 20 14:10:51 2017: Request 80226 was acted
upon.
> > >> > >> > >>> > Transaction: Ticket created by
> michael.j.erickson at noaa.gov
> > >> > >> > >>> > Queue: met_help
> > >> > >> > >>> > Subject: Grib2 Table Issue at WPC
> > >> > >> > >>> > Owner: Nobody
> > >> > >> > >>> > Requestors: michael.j.erickson at noaa.gov
> > >> > >> > >>> > Status: new
> > >> > >> > >>> > Ticket <URL: https://rt.rap.ucar.edu/rt/
> > >> > >> > Ticket/Display.html?id=80226
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> > Good afternoon,
> > >> > >> > >>> >
> > >> > >> > >>> > I am testing the newest version of METv6.0
installed by
> NCO
> > >> at
> > >> > WPC
> > >> > >> > >>> with the
> > >> > >> > >>> > aid of John Halley Gotway.
> > >> > >> > >>> >
> > >> > >> > >>> > I noticed some odd warnings when using pcp_combine
to sum
> > >> > >> > >>> precipitation and
> > >> > >> > >>> > convert grib2 to netcdf. They are listed below:
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>> > */opt/MET6/met6.0/bin/pcp_combine -sum
00000000_000000 1
> > >> > >> > >>> 20160623_010000
> > >> > >> > >>> > 01
> > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> <(201)%20606-2300>
> > >> > >> _preacc_1_MTDdaily/
> > >> > >> > ST4_lag00.nc
> > >> > >> > >>> > -pcpdir /usr1/wpc_cpgffh/gribs//temp/2016062300
> > >> > >> <(201)%20606-2300>_preacc_1_MTDdaily/WA
> > >> > >> > >>> RNING:
> > >> > >> > >>> > WARNING: Multiple GRIB2 table entries match lookup
> criteria
> > >> > >> > (parm_name
> > >> > >> > >>> =
> > >> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0,
> grib2_mtab =
> > >> 1,
> > >> > >> > >>> grib2_cntr =
> > >> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
> > >> parm_name:
> > >> > >> > APCP,
> > >> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57,
> grib2_ltab =
> > >> 0,
> > >> > >> > index_b
> > >> > >> > >>> = 1,
> > >> > >> > >>> > index_c = 8WARNING: parm_name: APCP, index_a =
0,
> > >> grib2_mtab =
> > >> > >> 14,
> > >> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1,
index_c =
> > >> > 8WARNING:
> > >> > >> > >>> Using:
> > >> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1,
grib2_cntr
> =
> > 0,
> > >> > >> > >>> grib2_ltab =
> > >> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: [1]
File
> > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> <(201)%20606-2300>
> > >> <(201)%20606-2300>
> > >> > >> > >>> _preacc_1_MTDdaily//
> > >> > >> > >>> > ST4.2016062301 <(201)%20606-2301> <(201)%20606-
2301>.01h
> > >> > >> > >>> > matches valid time of 20160623_010000DEBUG 1: [1]
Reading
> > >> input
> > >> > >> file:
> > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> <(201)%20606-2300>
> > >> _preacc_1_MTDdaily//
> > >> > >> > >>> > ST4.2016062301 <(201)%20606-2301>.01hWARNING:
> > >> > >> > >>> > WARNING: Multiple GRIB2 table entries match lookup
> criteria
> > >> > >> > (parm_name
> > >> > >> > >>> =
> > >> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0,
> grib2_mtab =
> > >> 1,
> > >> > >> > >>> grib2_cntr =
> > >> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
> > >> parm_name:
> > >> > >> > APCP,
> > >> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57,
> grib2_ltab =
> > >> 0,
> > >> > >> > index_b
> > >> > >> > >>> = 1,
> > >> > >> > >>> > index_c = 8WARNING: parm_name: APCP, index_a =
0,
> > >> grib2_mtab =
> > >> > >> 14,
> > >> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1,
index_c =
> > >> > 8WARNING:
> > >> > >> > >>> Using:
> > >> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1,
grib2_cntr
> =
> > 0,
> > >> > >> > >>> grib2_ltab =
> > >> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1:
Writing
> output
> > >> > file:
> > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> <(201)%20606-2300>
> > >> > >> _preacc_1_MTDdaily/
> > >> > >> > ST4_lag00.nc
> > >> > >> > >>> *
> > >> > >> > >>> >
> > >> > >> > >>> > The resulting file, ST4_lag00.nc contains data,
but is
> not
> > >> > >> readable
> > >> > >> > >>> when
> > >> > >> > >>> > using the 'ncdump' command or when running 'mtd.'
Note
> that
> > >> the
> > >> > >> same
> > >> > >> > >>> > commands work when using METv5.1. This appears to
be an
> > issue
> > >> > with
> > >> > >> > the
> > >> > >> > >>> > grib2 tables, but I wanted to be sure.
> > >> > >> > >>> >
> > >> > >> > >>> > Thank you for your help.
> > >> > >> > >>> >
> > >> > >> > >>> > Mike
> > >> > >> > >>> >
> > >> > >> > >>> > --
> > >> > >> > >>> >
> > >> > >> > >>> > Michael J. Erickson, Ph.D
> > >> > >> > >>> > Cooperative Institute for Research in
Environmental
> > Sciences
> > >> > >> (CIRES)
> > >> > >> > >>> > CIRES Contractor for the Weather Prediction Center
(WPC)
> > >> > >> > >>> >
> > >> > >> > >>> > Phone: 301-683-1546 <(301)%20683-1546>
> > >> > >> > >>> >
> > >> > >> > >>> >
> > >> > >> > >>>
> > >> > >> > >>>
> > >> > >> > >>
> > >> > >> > >>
> > >> > >> > >> --
> > >> > >> > >>
> > >> > >> > >> Michael J. Erickson, Ph.D
> > >> > >> > >> Cooperative Institute for Research in Environmental
Sciences
> > >> > (CIRES)
> > >> > >> > >> CIRES Contractor for the Weather Prediction Center
(WPC)
> > >> > >> > >>
> > >> > >> > >> Phone: 301-683-1546 <(301)%20683-1546>
> > >> > >> > >>
> > >> > >> > >>
> > >> > >> > >
> > >> > >> > >
> > >> > >> > > --
> > >> > >> > >
> > >> > >> > > Michael J. Erickson, Ph.D
> > >> > >> > > Cooperative Institute for Research in Environmental
Sciences
> > >> (CIRES)
> > >> > >> > > CIRES Contractor for the Weather Prediction Center
(WPC)
> > >> > >> > >
> > >> > >> > > Phone: 301-683-1546 <(301)%20683-1546>
> > >> > >> > >
> > >> > >> > >
> > >> > >> >
> > >> > >> >
> > >> > >> > --
> > >> > >> >
> > >> > >> > Michael J. Erickson, Ph.D
> > >> > >> > Cooperative Institute for Research in Environmental
Sciences
> > >> (CIRES)
> > >> > >> > CIRES Contractor for the Weather Prediction Center (WPC)
> > >> > >> >
> > >> > >> > Phone: 301-683-1546
> > >> > >> >
> > >> > >> >
> > >> > >>
> > >> > >>
> > >> > >
> > >> > >
> > >> > > --
> > >> > >
> > >> > > Michael J. Erickson, Ph.D
> > >> > > Cooperative Institute for Research in Environmental
Sciences
> (CIRES)
> > >> > > CIRES Contractor for the Weather Prediction Center (WPC)
> > >> > >
> > >> > > Phone: 301-683-1546 <(301)%20683-1546>
> > >> > >
> > >> > >
> > >> >
> > >> >
> > >> > --
> > >> >
> > >> > Michael J. Erickson, Ph.D
> > >> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > >> > CIRES Contractor for the Weather Prediction Center (WPC)
> > >> >
> > >> > Phone: 301-683-1546
> > >> >
> > >> >
> > >>
> > >>
> > >
> > >
> > > --
> > >
> > > Michael J. Erickson, Ph.D
> > > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > > CIRES Contractor for the Weather Prediction Center (WPC)
> > >
> > > Phone: 301-683-1546 <(301)%20683-1546>
> > >
> > >
> >
> >
> > --
> >
> > Michael J. Erickson, Ph.D
> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > CIRES Contractor for the Weather Prediction Center (WPC)
> >
> > Phone: 301-683-1546
> >
> >
>
>
--
Michael J. Erickson, Ph.D
Cooperative Institute for Research in Environmental Sciences (CIRES)
CIRES Contractor for the Weather Prediction Center (WPC)
Phone: 301-683-1546
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: John Halley Gotway
Time: Fri Apr 21 15:26:33 2017
Mike,
I see that I sent you the wrong command last time, sorry!
setenv LD_LIBRARY_PATH /opt/MET6/external_libs/lib:${LD_LIBRARY_PATH}
Please check to see if this file exists:
ls /opt/MET6/external_libs/lib/libnetcdf_c++4.so.1
Hopefully it does, and the setting I listed above will work.
John
On Fri, Apr 21, 2017 at 2:48 PM, Michael Erickson - NOAA Affiliate via
RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
>
> Thanks John,
>
> I've removed all other instances of LD_LIBRARY_PATH other than the
one you
> specified. I get:
>
> */opt/MET6/met6.0/bin/pcp_combine: error while loading shared
libraries:
> libnetcdf_c++4.so.1: cannot open shared object file: No such file or
> directory*
>
> This error has been encountered occasionally. Should I try linking
to a
> netcdf library on my local machine?
>
> Mike
>
> On Fri, Apr 21, 2017 at 8:38 PM, John Halley Gotway via RT <
> met_help at ucar.edu> wrote:
>
> > Mike,
> >
> > If you haven't already, please try putting that in the first
position:
> > setenv LD_LIBRARY_PATH /opt/MET6/external_libs:${LD_LIBRARY_PATH}
> >
> > The linker searches those paths in order. Does that change
anything?
> >
> > Thanks,
> > John
> >
> > On Fri, Apr 21, 2017 at 2:28 PM, Michael Erickson - NOAA Affiliate
via
> RT <
> > met_help at ucar.edu> wrote:
> >
> > >
> > > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> > >
> > > I believe the directory you're referring to is:
> > > /opt/MET6/external_libs/bin/. I've added that to
LD_LIBRARY_PATH, but
> it
> > > still errors.
> > >
> > > Mike
> > >
> > > On Fri, Apr 21, 2017 at 8:12 PM, Michael Erickson - NOAA
Affiliate <
> > > michael.j.erickson at noaa.gov> wrote:
> > >
> > > > Thanks John,
> > > >
> > > > To answer your first question:
> > > >
> > > >
> > > >
> > > >
> > > > *echo
> > > > $LD_LIBRARY_PATH/lib:/export-5/ncosrvnfs-cp/nawips2/os/
> > > linux2.6.32_x86_64/lib:/usr/lib:/usr/lib64:/opt/MET6/
> > >
external_libs:/opt/MET6/external_libs/lib:/usr/lib64/openmpi/lib/*
> > > > To answer your second:
> > > >
> > > >
> > > >
> > > >
> > > > *grep MET_NETCDF /opt/MET6/met6.0/config.loggrep:
> > > > /opt/MET6/met6.0/config.log: No such file or directory*
> > > > However, MET_NETCDF is set to /opt/MET6/external_libs
> > > >
> > > > Hope that helps,
> > > >
> > > > Mike
> > > >
> > > > On Fri, Apr 21, 2017 at 6:23 PM, John Halley Gotway via RT <
> > > > met_help at ucar.edu> wrote:
> > > >
> > > >> Mike,
> > > >>
> > > >> This looks to me like an issue with the environment. I think
these
> > sort
> > > >> of
> > > >> issues are inevitable as we switch from using NetCDF3 to
NetCDF4.
> > > NetCDF4
> > > >> is built upon HDF5, so generally, you can interpret HDF5
errors as
> > being
> > > >> problems with NetCDF.
> > > >>
> > > >> On theia, wcoss, and HPC machines as NCAR, we've begun using
> > modulefiles
> > > >> (i.e. module load met/6.0) and those files set up the
environment in
> > the
> > > >> required way. But lacking that, we should just check how you
have
> > > >> LD_LIBRARY_PATH set:
> > > >>
> > > >> echo $LD_LIBRARY_PATH
> > > >>
> > > >> That environment variables needs to include the directories
> containing
> > > the
> > > >> NetCDF and HDF5 libraries (usually, I've seen them placed
into the
> > same
> > > >> directory).
> > > >>
> > > >> Try running:
> > > >> grep MET_NETCDF /opt/MET6/met6.0/config.log
> > > >>
> > > >> Hopefully, that'll tell us where the NetCDF library used to
compile
> > MET
> > > >> actually lives on your system.
> > > >>
> > > >> Thanks,
> > > >> John
> > > >>
> > > >>
> > > >>
> > > >> On Fri, Apr 21, 2017 at 12:15 PM, Michael Erickson - NOAA
Affiliate
> > via
> > > >> RT <
> > > >> met_help at ucar.edu> wrote:
> > > >>
> > > >> >
> > > >> > <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> > > >> >
> > > >> > Hi All,
> > > >> >
> > > >> > I tried doing a similar thing with MODE. Similar to MTD,
> pcp_combine
> > > and
> > > >> > regrid_data_plan are run first. The error is below:
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> >
> > > >> > */opt/MET6/met6.0/bin/mode
> > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300_
> > > preacc_6_MODEdaily/HRRRv3_TLE_
> > > >> > lag06_f6.nc
> > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> > > >> > HRRRv3_TLE_lag06_f6.nc
> > > >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_USE_
> > > >> SAMP_f24_p6_t0.5
> > > >> > -outdir /usr1/wpc_cpgffh/gribs//temp/2016062300
> <(201)%20606-2300>
> > > >> _preacc_6_MODEdailyDEBUG 1:
> > > >> > Default Config File:
> > > >> > /opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG
1:
> Match
> > > >> Config
> > > >> > File:
> > > >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> > > >> > USE_SAMP_f24_p6_t0.5DEBUG
> > > >> > 1: Merge Config File:
> > > >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> > > >> > USE_SAMP_f24_p6_t0.5DEBUG
> > > >> > 1: Forecast File:
> > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
> > > >> _preacc_6_MODEdaily/
> > > >> > HRRRv3_TLE_lag06_f6.ncDEBUG
> > > >> > 1: Observation File:
> > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-2300>
> > > >> _preacc_6_MODEdaily/
> > > >> > HRRRv3_TLE_lag06_f6.ncERROR
> > > >> > : ERROR : setup_fcst_obs_data() -> can't get data from
file
> > > >> >
"/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> > > >> > HRRRv3_TLE_lag06_f6.nc"ERROR
> > > >> > : HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread
0:
> #000:
> > > >> H5T.c
> > > >> > line 1723 in H5Tclose(): not a datatype major: Invalid
> arguments
> > to
> > > >> > routine minor: Inappropriate typeNetCDF: HDF errorfile:
> > ncFile.cpp
> > > >> > line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1)
thread 0:
> > > >> #000:
> > > >> > H5T.c line 1723 in H5Tclose(): not a datatype major:
Invalid
> > > >> arguments
> > > >> > to routine minor: Inappropriate typeNetCDF: HDF
errorfile:
> > > ncFile.cpp
> > > >> > line:33*
> > > >> > Looks to be HDF related. Thanks!
> > > >> >
> > > >> > Mike
> > > >> >
> > > >> >
> > > >> > On Fri, Apr 21, 2017 at 1:58 PM, Michael Erickson - NOAA
> Affiliate <
> > > >> > michael.j.erickson at noaa.gov> wrote:
> > > >> >
> > > >> > > Thanks Tara!
> > > >> > >
> > > >> > > On Fri, Apr 21, 2017 at 1:45 PM, Tara Jensen via RT <
> > > >> met_help at ucar.edu>
> > > >> > > wrote:
> > > >> > >
> > > >> > >> John, I'll grab the data in a little bit and put it on
dakota.
> > > >> > >>
> > > >> > >> Cheers, Tara
> > > >> > >>
> > > >> > >> On Apr 21, 2017 7:22 AM, "Michael Erickson - NOAA
Affiliate via
> > > RT" <
> > > >> > >> met_help at ucar.edu> wrote:
> > > >> > >>
> > > >> > >> >
> > > >> > >> > <URL: https://rt.rap.ucar.edu/rt/
> Ticket/Display.html?id=80226
> > >
> > > >> > >> >
> > > >> > >> > Hi John,
> > > >> > >> >
> > > >> > >> > To explain my problem better...my code is able to run
METv5.1
> > but
> > > >> not
> > > >> > >> > METv6.0. The exe files used are 'pcp_combine',
> > > 'regrid_data_plane'
> > > >> and
> > > >> > >> then
> > > >> > >> > 'mtd,' In METv6.0 'pcp_combine' converts grib2 to
netcdf, but
> > > with
> > > >> the
> > > >> > >> > warnings mentioned earlier and with netcdf files that
are not
> > > >> readable
> > > >> > >> by
> > > >> > >> > ncdump. 'regrid_data_plane' also works, but 'mtd' does
not.
> The
> > > >> error
> > > >> > >> with
> > > >> > >> > 'mtd' is shown below, but I've found this mtd error
output
> > occurs
> > > >> even
> > > >> > >> if
> > > >> > >> > the issue is something else. In this case, I believe
mtd is
> > > unable
> > > >> to
> > > >> > >> read
> > > >> > >> > the netcdf file.
> > > >> > >> >
> > > >> > >> > Unfortunately I don't have access to theia. I'm not
sure how
> I
> > > can
> > > >> > give
> > > >> > >> you
> > > >> > >> > the files. I do not have ftp, the sftp command fails,
and the
> > scp
> > > >> > >> command
> > > >> > >> > may work but I can not create my own folder on your
server a
> > > >> priori. I
> > > >> > >> > shared some data with Tara over google drive through
her noaa
> > > >> account.
> > > >> > >> It
> > > >> > >> > contains forecast hours 1-6 of a sample "model" and
> > "observation"
> > > >> > >> created
> > > >> > >> > using METv6.0. This is after 'pcp_combine' and
> > > 'regrid_data_plane'
> > > >> > were
> > > >> > >> > run, but before 'mtd.'
> > > >> > >> >
> > > >> > >> > Thanks for your help and sorry for the round about way
of
> > sharing
> > > >> > data.
> > > >> > >> >
> > > >> > >> >
> > > >> > >> >
> > > >> > >> >
> > > >> > >> >
> > > >> > >> >
> > > >> > >> > *DEBUG 2: mtd_read_data() -> processing file
> > > >> > >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> > > >> _preacc_1_MTDdaily/
> > > >> > >> > HRRRv3_TLE_lag06_f1.nc"ERROR
> > > >> > >> > : ERROR : ERROR : mtd_read_data() -> unable to get
data
> > plane
> > > >> at
> > > >> > >> time
> > > >> > >> > 0ERROR : *
> > > >> > >> >
> > > >> > >> > Mike
> > > >> > >> >
> > > >> > >> > On Fri, Apr 21, 2017 at 12:06 PM, Michael Erickson -
NOAA
> > > >> Affiliate <
> > > >> > >> > michael.j.erickson at noaa.gov> wrote:
> > > >> > >> >
> > > >> > >> > > Hi John,
> > > >> > >> > >
> > > >> > >> > > Lets see if this works.
> > > >> > >> > >
> > > >> > >> > > Mike
> > > >> > >> > >
> > > >> > >> > > On Thu, Apr 20, 2017 at 8:31 PM, Michael Erickson -
NOAA
> > > >> Affiliate <
> > > >> > >> > > michael.j.erickson at noaa.gov> wrote:
> > > >> > >> > >
> > > >> > >> > >> Hi John,
> > > >> > >> > >>
> > > >> > >> > >> Thank you for your helpful response. Unfortunately,
I do
> not
> > > >> have
> > > >> > >> ftp on
> > > >> > >> > >> my linux system. Would you mind if I attached the
file
> here?
> > > >> > >> > >>
> > > >> > >> > >> Mike
> > > >> > >> > >>
> > > >> > >> > >> On Thu, Apr 20, 2017 at 8:17 PM, John Halley Gotway
via
> RT <
> > > >> > >> > >> met_help at ucar.edu> wrote:
> > > >> > >> > >>
> > > >> > >> > >>> Mike,
> > > >> > >> > >>>
> > > >> > >> > >>> We just posted the first set of bugfixes for met-
6.0
> here:
> > > >> > >> > >>>
http://www.dtcenter.org/met/users/support/known_issues/
> > > >> > >> > METv6.0/index.php
> > > >> > >> > >>>
> > > >> > >> > >>> One of them changes those warnings to debug(3)
level
> > messages
> > > >> > >> instead.
> > > >> > >> > >>>
> > > >> > >> > >>> Basically, we realized the logic for when/how to
do GRIB
> > > table
> > > >> > >> lookups
> > > >> > >> > >>> differs in the MET library code for GRIB1 and
GRIB2. We
> > > >> > considered
> > > >> > >> > using
> > > >> > >> > >>> the patch to make it consistent, but decided that
that
> was
> > > too
> > > >> big
> > > >> > >> of a
> > > >> > >> > >>> change and had the potential of introducing more
bugs.
> > > >> Instead,
> > > >> > >> we'll
> > > >> > >> > >>> make
> > > >> > >> > >>> it consistent in version 6.1. The easier choice
was just
> > > >> > >> downgrading
> > > >> > >> > >>> that
> > > >> > >> > >>> warning.
> > > >> > >> > >>>
> > > >> > >> > >>> Ultimately though, the bigger concern is the
output of
> > > >> > pcp_combine.
> > > >> > >> > MET
> > > >> > >> > >>> version 6.0 includes a major change from NetCDF3
to
> > NetCDF4.
> > > >> But
> > > >> > of
> > > >> > >> > >>> course, the other MET tools should be able to read
it.
> > > >> > >> > >>>
> > > >> > >> > >>> You could post that output file to our anonymous
ftp site
> > > and I
> > > >> > >> could
> > > >> > >> > >>> take
> > > >> > >> > >>> a look:
> > > >> > >> > >>> /usr1/wpc_cpgffh/gribs//temp/2016062300
> <(201)%20606-2300>
> > > >> <(201)%20606-2300>
> > > >> > >> > >>> _preacc_1_MTDdaily/ST4_lag00.nc
> > > >> > >> > >>>
> > > >> > >> > >>> Here's instructions for that:
> > > >> > >> > >>> http://www.dtcenter.org/met/
> users/support/met_help.php#ftp
> > > >> > >> > >>>
> > > >> > >> > >>> Thanks,
> > > >> > >> > >>> John
> > > >> > >> > >>>
> > > >> > >> > >>>
> > > >> > >> > >>>
> > > >> > >> > >>> On Thu, Apr 20, 2017 at 2:10 PM, Michael Erickson
- NOAA
> > > >> Affiliate
> > > >> > >> via
> > > >> > >> > >>> RT <
> > > >> > >> > >>> met_help at ucar.edu> wrote:
> > > >> > >> > >>>
> > > >> > >> > >>> >
> > > >> > >> > >>> > Thu Apr 20 14:10:51 2017: Request 80226 was
acted upon.
> > > >> > >> > >>> > Transaction: Ticket created by
> > michael.j.erickson at noaa.gov
> > > >> > >> > >>> > Queue: met_help
> > > >> > >> > >>> > Subject: Grib2 Table Issue at WPC
> > > >> > >> > >>> > Owner: Nobody
> > > >> > >> > >>> > Requestors: michael.j.erickson at noaa.gov
> > > >> > >> > >>> > Status: new
> > > >> > >> > >>> > Ticket <URL: https://rt.rap.ucar.edu/rt/
> > > >> > >> > Ticket/Display.html?id=80226
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> > Good afternoon,
> > > >> > >> > >>> >
> > > >> > >> > >>> > I am testing the newest version of METv6.0
installed by
> > NCO
> > > >> at
> > > >> > WPC
> > > >> > >> > >>> with the
> > > >> > >> > >>> > aid of John Halley Gotway.
> > > >> > >> > >>> >
> > > >> > >> > >>> > I noticed some odd warnings when using
pcp_combine to
> sum
> > > >> > >> > >>> precipitation and
> > > >> > >> > >>> > convert grib2 to netcdf. They are listed below:
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>> > */opt/MET6/met6.0/bin/pcp_combine -sum
> 00000000_000000 1
> > > >> > >> > >>> 20160623_010000
> > > >> > >> > >>> > 01
> > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> > <(201)%20606-2300>
> > > >> > >> _preacc_1_MTDdaily/
> > > >> > >> > ST4_lag00.nc
> > > >> > >> > >>> > -pcpdir /usr1/wpc_cpgffh/gribs//temp/2016062300
> > > >> > >> <(201)%20606-2300>_preacc_1_MTDdaily/WA
> > > >> > >> > >>> RNING:
> > > >> > >> > >>> > WARNING: Multiple GRIB2 table entries match
lookup
> > criteria
> > > >> > >> > (parm_name
> > > >> > >> > >>> =
> > > >> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0,
> > grib2_mtab =
> > > >> 1,
> > > >> > >> > >>> grib2_cntr =
> > > >> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
> > > >> parm_name:
> > > >> > >> > APCP,
> > > >> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57,
> > grib2_ltab =
> > > >> 0,
> > > >> > >> > index_b
> > > >> > >> > >>> = 1,
> > > >> > >> > >>> > index_c = 8WARNING: parm_name: APCP, index_a =
0,
> > > >> grib2_mtab =
> > > >> > >> 14,
> > > >> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1,
index_c =
> > > >> > 8WARNING:
> > > >> > >> > >>> Using:
> > > >> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1,
> grib2_cntr
> > =
> > > 0,
> > > >> > >> > >>> grib2_ltab =
> > > >> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1: [1]
File
> > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> > <(201)%20606-2300>
> > > >> <(201)%20606-2300>
> > > >> > >> > >>> _preacc_1_MTDdaily//
> > > >> > >> > >>> > ST4.2016062301 <(201)%20606-2301>
> <(201)%20606-2301>.01h
> > > >> > >> > >>> > matches valid time of 20160623_010000DEBUG 1:
[1]
> Reading
> > > >> input
> > > >> > >> file:
> > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> > <(201)%20606-2300>
> > > >> _preacc_1_MTDdaily//
> > > >> > >> > >>> > ST4.2016062301 <(201)%20606-2301>.01hWARNING:
> > > >> > >> > >>> > WARNING: Multiple GRIB2 table entries match
lookup
> > criteria
> > > >> > >> > (parm_name
> > > >> > >> > >>> =
> > > >> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0,
> > grib2_mtab =
> > > >> 1,
> > > >> > >> > >>> grib2_cntr =
> > > >> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
> > > >> parm_name:
> > > >> > >> > APCP,
> > > >> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57,
> > grib2_ltab =
> > > >> 0,
> > > >> > >> > index_b
> > > >> > >> > >>> = 1,
> > > >> > >> > >>> > index_c = 8WARNING: parm_name: APCP, index_a =
0,
> > > >> grib2_mtab =
> > > >> > >> 14,
> > > >> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1,
index_c =
> > > >> > 8WARNING:
> > > >> > >> > >>> Using:
> > > >> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1,
> grib2_cntr
> > =
> > > 0,
> > > >> > >> > >>> grib2_ltab =
> > > >> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1:
Writing
> > output
> > > >> > file:
> > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> > <(201)%20606-2300>
> > > >> > >> _preacc_1_MTDdaily/
> > > >> > >> > ST4_lag00.nc
> > > >> > >> > >>> *
> > > >> > >> > >>> >
> > > >> > >> > >>> > The resulting file, ST4_lag00.nc contains data,
but is
> > not
> > > >> > >> readable
> > > >> > >> > >>> when
> > > >> > >> > >>> > using the 'ncdump' command or when running
'mtd.' Note
> > that
> > > >> the
> > > >> > >> same
> > > >> > >> > >>> > commands work when using METv5.1. This appears
to be an
> > > issue
> > > >> > with
> > > >> > >> > the
> > > >> > >> > >>> > grib2 tables, but I wanted to be sure.
> > > >> > >> > >>> >
> > > >> > >> > >>> > Thank you for your help.
> > > >> > >> > >>> >
> > > >> > >> > >>> > Mike
> > > >> > >> > >>> >
> > > >> > >> > >>> > --
> > > >> > >> > >>> >
> > > >> > >> > >>> > Michael J. Erickson, Ph.D
> > > >> > >> > >>> > Cooperative Institute for Research in
Environmental
> > > Sciences
> > > >> > >> (CIRES)
> > > >> > >> > >>> > CIRES Contractor for the Weather Prediction
Center
> (WPC)
> > > >> > >> > >>> >
> > > >> > >> > >>> > Phone: 301-683-1546 <(301)%20683-1546>
> > > >> > >> > >>> >
> > > >> > >> > >>> >
> > > >> > >> > >>>
> > > >> > >> > >>>
> > > >> > >> > >>
> > > >> > >> > >>
> > > >> > >> > >> --
> > > >> > >> > >>
> > > >> > >> > >> Michael J. Erickson, Ph.D
> > > >> > >> > >> Cooperative Institute for Research in Environmental
> Sciences
> > > >> > (CIRES)
> > > >> > >> > >> CIRES Contractor for the Weather Prediction Center
(WPC)
> > > >> > >> > >>
> > > >> > >> > >> Phone: 301-683-1546 <(301)%20683-1546>
> > > >> > >> > >>
> > > >> > >> > >>
> > > >> > >> > >
> > > >> > >> > >
> > > >> > >> > > --
> > > >> > >> > >
> > > >> > >> > > Michael J. Erickson, Ph.D
> > > >> > >> > > Cooperative Institute for Research in Environmental
> Sciences
> > > >> (CIRES)
> > > >> > >> > > CIRES Contractor for the Weather Prediction Center
(WPC)
> > > >> > >> > >
> > > >> > >> > > Phone: 301-683-1546 <(301)%20683-1546>
> > > >> > >> > >
> > > >> > >> > >
> > > >> > >> >
> > > >> > >> >
> > > >> > >> > --
> > > >> > >> >
> > > >> > >> > Michael J. Erickson, Ph.D
> > > >> > >> > Cooperative Institute for Research in Environmental
Sciences
> > > >> (CIRES)
> > > >> > >> > CIRES Contractor for the Weather Prediction Center
(WPC)
> > > >> > >> >
> > > >> > >> > Phone: 301-683-1546
> > > >> > >> >
> > > >> > >> >
> > > >> > >>
> > > >> > >>
> > > >> > >
> > > >> > >
> > > >> > > --
> > > >> > >
> > > >> > > Michael J. Erickson, Ph.D
> > > >> > > Cooperative Institute for Research in Environmental
Sciences
> > (CIRES)
> > > >> > > CIRES Contractor for the Weather Prediction Center (WPC)
> > > >> > >
> > > >> > > Phone: 301-683-1546 <(301)%20683-1546>
> > > >> > >
> > > >> > >
> > > >> >
> > > >> >
> > > >> > --
> > > >> >
> > > >> > Michael J. Erickson, Ph.D
> > > >> > Cooperative Institute for Research in Environmental
Sciences
> (CIRES)
> > > >> > CIRES Contractor for the Weather Prediction Center (WPC)
> > > >> >
> > > >> > Phone: 301-683-1546
> > > >> >
> > > >> >
> > > >>
> > > >>
> > > >
> > > >
> > > > --
> > > >
> > > > Michael J. Erickson, Ph.D
> > > > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > > > CIRES Contractor for the Weather Prediction Center (WPC)
> > > >
> > > > Phone: 301-683-1546 <(301)%20683-1546>
> > > >
> > > >
> > >
> > >
> > > --
> > >
> > > Michael J. Erickson, Ph.D
> > > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > > CIRES Contractor for the Weather Prediction Center (WPC)
> > >
> > > Phone: 301-683-1546
> > >
> > >
> >
> >
>
>
> --
>
> Michael J. Erickson, Ph.D
> Cooperative Institute for Research in Environmental Sciences (CIRES)
> CIRES Contractor for the Weather Prediction Center (WPC)
>
> Phone: 301-683-1546
>
>
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: Michael Erickson - NOAA Affiliate
Time: Mon Apr 24 06:49:18 2017
Hey John,
No worries and thanks! pcp_combine works again. Below is my
LD_LIBRARY_PATH
*echo
$LD_LIBRARY_PATH/lib:/export-5/ncosrvnfs-
cp/nawips2/os/linux2.6.32_x86_64/lib:/opt/MET6/external_libs/lib:/usr/lib:/usr/lib64:/opt/MET6/external_libs:/opt/MET6/external_libs/lib*
Unfortunately, our original problem remains. I use pcp_combine,
regrid_data_plane and then mode. Below is my error output from mode:
*/opt/MET6/met6.0/bin/mode /usr1/wpc_cpgffh/gribs//temp/2016062300
<(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc
/export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_USE_SAMP_f24_p6_t0.5
-outdir
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdailyDEBUG 1:
Default Config File:
/opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG 1: Match
Config
File:
/export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_USE_SAMP_f24_p6_t0.5DEBUG
1: Merge Config File:
/export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_USE_SAMP_f24_p6_t0.5DEBUG
1: Forecast File: /usr1/wpc_cpgffh/gribs//temp/2016062300
<(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.ncDEBUG 1:
Observation File: /usr1/wpc_cpgffh/gribs//temp/2016062300
<(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.ncERROR :
ERROR
: setup_fcst_obs_data() -> can't get data from file
"/usr1/wpc_cpgffh/gribs//temp/2016062300
<(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc"ERROR :
HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0: #000:
H5T.c
line 1723 in H5Tclose(): not a datatype major: Invalid arguments to
routine minor: Inappropriate typeNetCDF: HDF errorfile: ncFile.cpp
line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0:
#000:
H5T.c line 1723 in H5Tclose(): not a datatype major: Invalid
arguments
to routine minor: Inappropriate typeNetCDF: HDF errorfile:
ncFile.cpp
line:33*
Thanks!
Mike
On Fri, Apr 21, 2017 at 5:26 PM, John Halley Gotway via RT <
met_help at ucar.edu> wrote:
> Mike,
>
> I see that I sent you the wrong command last time, sorry!
>
> setenv LD_LIBRARY_PATH
/opt/MET6/external_libs/lib:${LD_LIBRARY_PATH}
>
> Please check to see if this file exists:
> ls /opt/MET6/external_libs/lib/libnetcdf_c++4.so.1
>
> Hopefully it does, and the setting I listed above will work.
>
> John
>
> On Fri, Apr 21, 2017 at 2:48 PM, Michael Erickson - NOAA Affiliate
via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> >
> > Thanks John,
> >
> > I've removed all other instances of LD_LIBRARY_PATH other than the
one
> you
> > specified. I get:
> >
> > */opt/MET6/met6.0/bin/pcp_combine: error while loading shared
libraries:
> > libnetcdf_c++4.so.1: cannot open shared object file: No such file
or
> > directory*
> >
> > This error has been encountered occasionally. Should I try linking
to a
> > netcdf library on my local machine?
> >
> > Mike
> >
> > On Fri, Apr 21, 2017 at 8:38 PM, John Halley Gotway via RT <
> > met_help at ucar.edu> wrote:
> >
> > > Mike,
> > >
> > > If you haven't already, please try putting that in the first
position:
> > > setenv LD_LIBRARY_PATH
/opt/MET6/external_libs:${LD_LIBRARY_PATH}
> > >
> > > The linker searches those paths in order. Does that change
anything?
> > >
> > > Thanks,
> > > John
> > >
> > > On Fri, Apr 21, 2017 at 2:28 PM, Michael Erickson - NOAA
Affiliate via
> > RT <
> > > met_help at ucar.edu> wrote:
> > >
> > > >
> > > > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226
>
> > > >
> > > > I believe the directory you're referring to is:
> > > > /opt/MET6/external_libs/bin/. I've added that to
LD_LIBRARY_PATH, but
> > it
> > > > still errors.
> > > >
> > > > Mike
> > > >
> > > > On Fri, Apr 21, 2017 at 8:12 PM, Michael Erickson - NOAA
Affiliate <
> > > > michael.j.erickson at noaa.gov> wrote:
> > > >
> > > > > Thanks John,
> > > > >
> > > > > To answer your first question:
> > > > >
> > > > >
> > > > >
> > > > >
> > > > > *echo
> > > > > $LD_LIBRARY_PATH/lib:/export-5/ncosrvnfs-cp/nawips2/os/
> > > > linux2.6.32_x86_64/lib:/usr/lib:/usr/lib64:/opt/MET6/
> > > >
external_libs:/opt/MET6/external_libs/lib:/usr/lib64/openmpi/lib/*
> > > > > To answer your second:
> > > > >
> > > > >
> > > > >
> > > > >
> > > > > *grep MET_NETCDF /opt/MET6/met6.0/config.loggrep:
> > > > > /opt/MET6/met6.0/config.log: No such file or directory*
> > > > > However, MET_NETCDF is set to /opt/MET6/external_libs
> > > > >
> > > > > Hope that helps,
> > > > >
> > > > > Mike
> > > > >
> > > > > On Fri, Apr 21, 2017 at 6:23 PM, John Halley Gotway via RT <
> > > > > met_help at ucar.edu> wrote:
> > > > >
> > > > >> Mike,
> > > > >>
> > > > >> This looks to me like an issue with the environment. I
think
> these
> > > sort
> > > > >> of
> > > > >> issues are inevitable as we switch from using NetCDF3 to
NetCDF4.
> > > > NetCDF4
> > > > >> is built upon HDF5, so generally, you can interpret HDF5
errors as
> > > being
> > > > >> problems with NetCDF.
> > > > >>
> > > > >> On theia, wcoss, and HPC machines as NCAR, we've begun
using
> > > modulefiles
> > > > >> (i.e. module load met/6.0) and those files set up the
environment
> in
> > > the
> > > > >> required way. But lacking that, we should just check how
you have
> > > > >> LD_LIBRARY_PATH set:
> > > > >>
> > > > >> echo $LD_LIBRARY_PATH
> > > > >>
> > > > >> That environment variables needs to include the directories
> > containing
> > > > the
> > > > >> NetCDF and HDF5 libraries (usually, I've seen them placed
into the
> > > same
> > > > >> directory).
> > > > >>
> > > > >> Try running:
> > > > >> grep MET_NETCDF /opt/MET6/met6.0/config.log
> > > > >>
> > > > >> Hopefully, that'll tell us where the NetCDF library used to
> compile
> > > MET
> > > > >> actually lives on your system.
> > > > >>
> > > > >> Thanks,
> > > > >> John
> > > > >>
> > > > >>
> > > > >>
> > > > >> On Fri, Apr 21, 2017 at 12:15 PM, Michael Erickson - NOAA
> Affiliate
> > > via
> > > > >> RT <
> > > > >> met_help at ucar.edu> wrote:
> > > > >>
> > > > >> >
> > > > >> > <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> > > > >> >
> > > > >> > Hi All,
> > > > >> >
> > > > >> > I tried doing a similar thing with MODE. Similar to MTD,
> > pcp_combine
> > > > and
> > > > >> > regrid_data_plan are run first. The error is below:
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> >
> > > > >> > */opt/MET6/met6.0/bin/mode
> > > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300_
> > > > preacc_6_MODEdaily/HRRRv3_TLE_
> > > > >> > lag06_f6.nc
> > > > >> >
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> > > > >> > HRRRv3_TLE_lag06_f6.nc
> > > > >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_USE_
> > > > >> SAMP_f24_p6_t0.5
> > > > >> > -outdir /usr1/wpc_cpgffh/gribs//temp/2016062300
> > <(201)%20606-2300>
> > > > >> _preacc_6_MODEdailyDEBUG 1:
> > > > >> > Default Config File:
> > > > >> > /opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG
1:
> > Match
> > > > >> Config
> > > > >> > File:
> > > > >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> > > > >> > USE_SAMP_f24_p6_t0.5DEBUG
> > > > >> > 1: Merge Config File:
> > > > >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> > > > >> > USE_SAMP_f24_p6_t0.5DEBUG
> > > > >> > 1: Forecast File:
> > > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> > > > >> _preacc_6_MODEdaily/
> > > > >> > HRRRv3_TLE_lag06_f6.ncDEBUG
> > > > >> > 1: Observation File:
> > > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> > > > >> _preacc_6_MODEdaily/
> > > > >> > HRRRv3_TLE_lag06_f6.ncERROR
> > > > >> > : ERROR : setup_fcst_obs_data() -> can't get data from
file
> > > > >> >
"/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> > > > >> > HRRRv3_TLE_lag06_f6.nc"ERROR
> > > > >> > : HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1)
thread 0:
> > #000:
> > > > >> H5T.c
> > > > >> > line 1723 in H5Tclose(): not a datatype major: Invalid
> > arguments
> > > to
> > > > >> > routine minor: Inappropriate typeNetCDF: HDF
errorfile:
> > > ncFile.cpp
> > > > >> > line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1)
thread
> 0:
> > > > >> #000:
> > > > >> > H5T.c line 1723 in H5Tclose(): not a datatype major:
Invalid
> > > > >> arguments
> > > > >> > to routine minor: Inappropriate typeNetCDF: HDF
errorfile:
> > > > ncFile.cpp
> > > > >> > line:33*
> > > > >> > Looks to be HDF related. Thanks!
> > > > >> >
> > > > >> > Mike
> > > > >> >
> > > > >> >
> > > > >> > On Fri, Apr 21, 2017 at 1:58 PM, Michael Erickson - NOAA
> > Affiliate <
> > > > >> > michael.j.erickson at noaa.gov> wrote:
> > > > >> >
> > > > >> > > Thanks Tara!
> > > > >> > >
> > > > >> > > On Fri, Apr 21, 2017 at 1:45 PM, Tara Jensen via RT <
> > > > >> met_help at ucar.edu>
> > > > >> > > wrote:
> > > > >> > >
> > > > >> > >> John, I'll grab the data in a little bit and put it
on
> dakota.
> > > > >> > >>
> > > > >> > >> Cheers, Tara
> > > > >> > >>
> > > > >> > >> On Apr 21, 2017 7:22 AM, "Michael Erickson - NOAA
Affiliate
> via
> > > > RT" <
> > > > >> > >> met_help at ucar.edu> wrote:
> > > > >> > >>
> > > > >> > >> >
> > > > >> > >> > <URL: https://rt.rap.ucar.edu/rt/
> > Ticket/Display.html?id=80226
> > > >
> > > > >> > >> >
> > > > >> > >> > Hi John,
> > > > >> > >> >
> > > > >> > >> > To explain my problem better...my code is able to
run
> METv5.1
> > > but
> > > > >> not
> > > > >> > >> > METv6.0. The exe files used are 'pcp_combine',
> > > > 'regrid_data_plane'
> > > > >> and
> > > > >> > >> then
> > > > >> > >> > 'mtd,' In METv6.0 'pcp_combine' converts grib2 to
netcdf,
> but
> > > > with
> > > > >> the
> > > > >> > >> > warnings mentioned earlier and with netcdf files
that are
> not
> > > > >> readable
> > > > >> > >> by
> > > > >> > >> > ncdump. 'regrid_data_plane' also works, but 'mtd'
does not.
> > The
> > > > >> error
> > > > >> > >> with
> > > > >> > >> > 'mtd' is shown below, but I've found this mtd error
output
> > > occurs
> > > > >> even
> > > > >> > >> if
> > > > >> > >> > the issue is something else. In this case, I believe
mtd is
> > > > unable
> > > > >> to
> > > > >> > >> read
> > > > >> > >> > the netcdf file.
> > > > >> > >> >
> > > > >> > >> > Unfortunately I don't have access to theia. I'm not
sure
> how
> > I
> > > > can
> > > > >> > give
> > > > >> > >> you
> > > > >> > >> > the files. I do not have ftp, the sftp command
fails, and
> the
> > > scp
> > > > >> > >> command
> > > > >> > >> > may work but I can not create my own folder on your
server
> a
> > > > >> priori. I
> > > > >> > >> > shared some data with Tara over google drive through
her
> noaa
> > > > >> account.
> > > > >> > >> It
> > > > >> > >> > contains forecast hours 1-6 of a sample "model" and
> > > "observation"
> > > > >> > >> created
> > > > >> > >> > using METv6.0. This is after 'pcp_combine' and
> > > > 'regrid_data_plane'
> > > > >> > were
> > > > >> > >> > run, but before 'mtd.'
> > > > >> > >> >
> > > > >> > >> > Thanks for your help and sorry for the round about
way of
> > > sharing
> > > > >> > data.
> > > > >> > >> >
> > > > >> > >> >
> > > > >> > >> >
> > > > >> > >> >
> > > > >> > >> >
> > > > >> > >> >
> > > > >> > >> > *DEBUG 2: mtd_read_data() -> processing file
> > > > >> > >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300
> <(201)%20606-2300>
> > > > >> _preacc_1_MTDdaily/
> > > > >> > >> > HRRRv3_TLE_lag06_f1.nc"ERROR
> > > > >> > >> > : ERROR : ERROR : mtd_read_data() -> unable to
get data
> > > plane
> > > > >> at
> > > > >> > >> time
> > > > >> > >> > 0ERROR : *
> > > > >> > >> >
> > > > >> > >> > Mike
> > > > >> > >> >
> > > > >> > >> > On Fri, Apr 21, 2017 at 12:06 PM, Michael Erickson -
NOAA
> > > > >> Affiliate <
> > > > >> > >> > michael.j.erickson at noaa.gov> wrote:
> > > > >> > >> >
> > > > >> > >> > > Hi John,
> > > > >> > >> > >
> > > > >> > >> > > Lets see if this works.
> > > > >> > >> > >
> > > > >> > >> > > Mike
> > > > >> > >> > >
> > > > >> > >> > > On Thu, Apr 20, 2017 at 8:31 PM, Michael Erickson
- NOAA
> > > > >> Affiliate <
> > > > >> > >> > > michael.j.erickson at noaa.gov> wrote:
> > > > >> > >> > >
> > > > >> > >> > >> Hi John,
> > > > >> > >> > >>
> > > > >> > >> > >> Thank you for your helpful response.
Unfortunately, I do
> > not
> > > > >> have
> > > > >> > >> ftp on
> > > > >> > >> > >> my linux system. Would you mind if I attached the
file
> > here?
> > > > >> > >> > >>
> > > > >> > >> > >> Mike
> > > > >> > >> > >>
> > > > >> > >> > >> On Thu, Apr 20, 2017 at 8:17 PM, John Halley
Gotway via
> > RT <
> > > > >> > >> > >> met_help at ucar.edu> wrote:
> > > > >> > >> > >>
> > > > >> > >> > >>> Mike,
> > > > >> > >> > >>>
> > > > >> > >> > >>> We just posted the first set of bugfixes for
met-6.0
> > here:
> > > > >> > >> > >>> http://www.dtcenter.org/met/
> users/support/known_issues/
> > > > >> > >> > METv6.0/index.php
> > > > >> > >> > >>>
> > > > >> > >> > >>> One of them changes those warnings to debug(3)
level
> > > messages
> > > > >> > >> instead.
> > > > >> > >> > >>>
> > > > >> > >> > >>> Basically, we realized the logic for when/how to
do
> GRIB
> > > > table
> > > > >> > >> lookups
> > > > >> > >> > >>> differs in the MET library code for GRIB1 and
GRIB2.
> We
> > > > >> > considered
> > > > >> > >> > using
> > > > >> > >> > >>> the patch to make it consistent, but decided
that that
> > was
> > > > too
> > > > >> big
> > > > >> > >> of a
> > > > >> > >> > >>> change and had the potential of introducing more
bugs.
> > > > >> Instead,
> > > > >> > >> we'll
> > > > >> > >> > >>> make
> > > > >> > >> > >>> it consistent in version 6.1. The easier choice
was
> just
> > > > >> > >> downgrading
> > > > >> > >> > >>> that
> > > > >> > >> > >>> warning.
> > > > >> > >> > >>>
> > > > >> > >> > >>> Ultimately though, the bigger concern is the
output of
> > > > >> > pcp_combine.
> > > > >> > >> > MET
> > > > >> > >> > >>> version 6.0 includes a major change from NetCDF3
to
> > > NetCDF4.
> > > > >> But
> > > > >> > of
> > > > >> > >> > >>> course, the other MET tools should be able to
read it.
> > > > >> > >> > >>>
> > > > >> > >> > >>> You could post that output file to our anonymous
ftp
> site
> > > > and I
> > > > >> > >> could
> > > > >> > >> > >>> take
> > > > >> > >> > >>> a look:
> > > > >> > >> > >>> /usr1/wpc_cpgffh/gribs//temp/2016062300
> > <(201)%20606-2300>
> > > > >> <(201)%20606-2300>
> > > > >> > >> > >>> _preacc_1_MTDdaily/ST4_lag00.nc
> > > > >> > >> > >>>
> > > > >> > >> > >>> Here's instructions for that:
> > > > >> > >> > >>> http://www.dtcenter.org/met/
> > users/support/met_help.php#ftp
> > > > >> > >> > >>>
> > > > >> > >> > >>> Thanks,
> > > > >> > >> > >>> John
> > > > >> > >> > >>>
> > > > >> > >> > >>>
> > > > >> > >> > >>>
> > > > >> > >> > >>> On Thu, Apr 20, 2017 at 2:10 PM, Michael
Erickson -
> NOAA
> > > > >> Affiliate
> > > > >> > >> via
> > > > >> > >> > >>> RT <
> > > > >> > >> > >>> met_help at ucar.edu> wrote:
> > > > >> > >> > >>>
> > > > >> > >> > >>> >
> > > > >> > >> > >>> > Thu Apr 20 14:10:51 2017: Request 80226 was
acted
> upon.
> > > > >> > >> > >>> > Transaction: Ticket created by
> > > michael.j.erickson at noaa.gov
> > > > >> > >> > >>> > Queue: met_help
> > > > >> > >> > >>> > Subject: Grib2 Table Issue at WPC
> > > > >> > >> > >>> > Owner: Nobody
> > > > >> > >> > >>> > Requestors: michael.j.erickson at noaa.gov
> > > > >> > >> > >>> > Status: new
> > > > >> > >> > >>> > Ticket <URL: https://rt.rap.ucar.edu/rt/
> > > > >> > >> > Ticket/Display.html?id=80226
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> > Good afternoon,
> > > > >> > >> > >>> >
> > > > >> > >> > >>> > I am testing the newest version of METv6.0
installed
> by
> > > NCO
> > > > >> at
> > > > >> > WPC
> > > > >> > >> > >>> with the
> > > > >> > >> > >>> > aid of John Halley Gotway.
> > > > >> > >> > >>> >
> > > > >> > >> > >>> > I noticed some odd warnings when using
pcp_combine to
> > sum
> > > > >> > >> > >>> precipitation and
> > > > >> > >> > >>> > convert grib2 to netcdf. They are listed
below:
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>> > */opt/MET6/met6.0/bin/pcp_combine -sum
> > 00000000_000000 1
> > > > >> > >> > >>> 20160623_010000
> > > > >> > >> > >>> > 01
> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> > > <(201)%20606-2300>
> > > > >> > >> _preacc_1_MTDdaily/
> > > > >> > >> > ST4_lag00.nc
> > > > >> > >> > >>> > -pcpdir
/usr1/wpc_cpgffh/gribs//temp/2016062300
> > > > >> > >> <(201)%20606-2300>_preacc_1_MTDdaily/WA
> > > > >> > >> > >>> RNING:
> > > > >> > >> > >>> > WARNING: Multiple GRIB2 table entries match
lookup
> > > criteria
> > > > >> > >> > (parm_name
> > > > >> > >> > >>> =
> > > > >> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0,
> > > grib2_mtab =
> > > > >> 1,
> > > > >> > >> > >>> grib2_cntr =
> > > > >> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
> > > > >> parm_name:
> > > > >> > >> > APCP,
> > > > >> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57,
> > > grib2_ltab =
> > > > >> 0,
> > > > >> > >> > index_b
> > > > >> > >> > >>> = 1,
> > > > >> > >> > >>> > index_c = 8WARNING: parm_name: APCP, index_a
= 0,
> > > > >> grib2_mtab =
> > > > >> > >> 14,
> > > > >> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1,
> index_c =
> > > > >> > 8WARNING:
> > > > >> > >> > >>> Using:
> > > > >> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1,
> > grib2_cntr
> > > =
> > > > 0,
> > > > >> > >> > >>> grib2_ltab =
> > > > >> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1:
[1] File
> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> > > <(201)%20606-2300>
> > > > >> <(201)%20606-2300>
> > > > >> > >> > >>> _preacc_1_MTDdaily//
> > > > >> > >> > >>> > ST4.2016062301 <(201)%20606-2301>
> > <(201)%20606-2301>.01h
> > > > >> > >> > >>> > matches valid time of 20160623_010000DEBUG 1:
[1]
> > Reading
> > > > >> input
> > > > >> > >> file:
> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> > > <(201)%20606-2300>
> > > > >> _preacc_1_MTDdaily//
> > > > >> > >> > >>> > ST4.2016062301 <(201)%20606-2301>.01hWARNING:
> > > > >> > >> > >>> > WARNING: Multiple GRIB2 table entries match
lookup
> > > criteria
> > > > >> > >> > (parm_name
> > > > >> > >> > >>> =
> > > > >> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a = 0,
> > > grib2_mtab =
> > > > >> 1,
> > > > >> > >> > >>> grib2_cntr =
> > > > >> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
> > > > >> parm_name:
> > > > >> > >> > APCP,
> > > > >> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr = 57,
> > > grib2_ltab =
> > > > >> 0,
> > > > >> > >> > index_b
> > > > >> > >> > >>> = 1,
> > > > >> > >> > >>> > index_c = 8WARNING: parm_name: APCP, index_a
= 0,
> > > > >> grib2_mtab =
> > > > >> > >> 14,
> > > > >> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1,
> index_c =
> > > > >> > 8WARNING:
> > > > >> > >> > >>> Using:
> > > > >> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1,
> > grib2_cntr
> > > =
> > > > 0,
> > > > >> > >> > >>> grib2_ltab =
> > > > >> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1:
Writing
> > > output
> > > > >> > file:
> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> > > <(201)%20606-2300>
> > > > >> > >> _preacc_1_MTDdaily/
> > > > >> > >> > ST4_lag00.nc
> > > > >> > >> > >>> *
> > > > >> > >> > >>> >
> > > > >> > >> > >>> > The resulting file, ST4_lag00.nc contains
data, but
> is
> > > not
> > > > >> > >> readable
> > > > >> > >> > >>> when
> > > > >> > >> > >>> > using the 'ncdump' command or when running
'mtd.'
> Note
> > > that
> > > > >> the
> > > > >> > >> same
> > > > >> > >> > >>> > commands work when using METv5.1. This appears
to be
> an
> > > > issue
> > > > >> > with
> > > > >> > >> > the
> > > > >> > >> > >>> > grib2 tables, but I wanted to be sure.
> > > > >> > >> > >>> >
> > > > >> > >> > >>> > Thank you for your help.
> > > > >> > >> > >>> >
> > > > >> > >> > >>> > Mike
> > > > >> > >> > >>> >
> > > > >> > >> > >>> > --
> > > > >> > >> > >>> >
> > > > >> > >> > >>> > Michael J. Erickson, Ph.D
> > > > >> > >> > >>> > Cooperative Institute for Research in
Environmental
> > > > Sciences
> > > > >> > >> (CIRES)
> > > > >> > >> > >>> > CIRES Contractor for the Weather Prediction
Center
> > (WPC)
> > > > >> > >> > >>> >
> > > > >> > >> > >>> > Phone: 301-683-1546 <(301)%20683-1546>
> > > > >> > >> > >>> >
> > > > >> > >> > >>> >
> > > > >> > >> > >>>
> > > > >> > >> > >>>
> > > > >> > >> > >>
> > > > >> > >> > >>
> > > > >> > >> > >> --
> > > > >> > >> > >>
> > > > >> > >> > >> Michael J. Erickson, Ph.D
> > > > >> > >> > >> Cooperative Institute for Research in
Environmental
> > Sciences
> > > > >> > (CIRES)
> > > > >> > >> > >> CIRES Contractor for the Weather Prediction
Center (WPC)
> > > > >> > >> > >>
> > > > >> > >> > >> Phone: 301-683-1546 <(301)%20683-1546>
> > > > >> > >> > >>
> > > > >> > >> > >>
> > > > >> > >> > >
> > > > >> > >> > >
> > > > >> > >> > > --
> > > > >> > >> > >
> > > > >> > >> > > Michael J. Erickson, Ph.D
> > > > >> > >> > > Cooperative Institute for Research in
Environmental
> > Sciences
> > > > >> (CIRES)
> > > > >> > >> > > CIRES Contractor for the Weather Prediction Center
(WPC)
> > > > >> > >> > >
> > > > >> > >> > > Phone: 301-683-1546 <(301)%20683-1546>
> > > > >> > >> > >
> > > > >> > >> > >
> > > > >> > >> >
> > > > >> > >> >
> > > > >> > >> > --
> > > > >> > >> >
> > > > >> > >> > Michael J. Erickson, Ph.D
> > > > >> > >> > Cooperative Institute for Research in Environmental
> Sciences
> > > > >> (CIRES)
> > > > >> > >> > CIRES Contractor for the Weather Prediction Center
(WPC)
> > > > >> > >> >
> > > > >> > >> > Phone: 301-683-1546
> > > > >> > >> >
> > > > >> > >> >
> > > > >> > >>
> > > > >> > >>
> > > > >> > >
> > > > >> > >
> > > > >> > > --
> > > > >> > >
> > > > >> > > Michael J. Erickson, Ph.D
> > > > >> > > Cooperative Institute for Research in Environmental
Sciences
> > > (CIRES)
> > > > >> > > CIRES Contractor for the Weather Prediction Center
(WPC)
> > > > >> > >
> > > > >> > > Phone: 301-683-1546 <(301)%20683-1546>
> > > > >> > >
> > > > >> > >
> > > > >> >
> > > > >> >
> > > > >> > --
> > > > >> >
> > > > >> > Michael J. Erickson, Ph.D
> > > > >> > Cooperative Institute for Research in Environmental
Sciences
> > (CIRES)
> > > > >> > CIRES Contractor for the Weather Prediction Center (WPC)
> > > > >> >
> > > > >> > Phone: 301-683-1546
> > > > >> >
> > > > >> >
> > > > >>
> > > > >>
> > > > >
> > > > >
> > > > > --
> > > > >
> > > > > Michael J. Erickson, Ph.D
> > > > > Cooperative Institute for Research in Environmental Sciences
> (CIRES)
> > > > > CIRES Contractor for the Weather Prediction Center (WPC)
> > > > >
> > > > > Phone: 301-683-1546 <(301)%20683-1546>
> > > > >
> > > > >
> > > >
> > > >
> > > > --
> > > >
> > > > Michael J. Erickson, Ph.D
> > > > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > > > CIRES Contractor for the Weather Prediction Center (WPC)
> > > >
> > > > Phone: 301-683-1546
> > > >
> > > >
> > >
> > >
> >
> >
> > --
> >
> > Michael J. Erickson, Ph.D
> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > CIRES Contractor for the Weather Prediction Center (WPC)
> >
> > Phone: 301-683-1546
> >
> >
>
>
--
Michael J. Erickson, Ph.D
Cooperative Institute for Research in Environmental Sciences (CIRES)
CIRES Contractor for the Weather Prediction Center (WPC)
Phone: 301-683-1546
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: Michael Erickson - NOAA Affiliate
Time: Tue Apr 25 06:51:41 2017
Hi John,
I am still unable to resolve the HDF problem I emailed you yesterday.
Note
that on our netapp there are two versions of MET, METv5.1 at /opt/MET
and
METv6.0 at /opt/MET6. I noticed that the libnetcdf instructions,
located at
/opt/MET6/external_libs/lib/libhdf5.settings references the old
version of
MET located at /opt/MET/. Is this a potential problem?
Thanks,
Mike
On Mon, Apr 24, 2017 at 12:49 PM, Michael Erickson - NOAA Affiliate <
michael.j.erickson at noaa.gov> wrote:
> Hey John,
>
> No worries and thanks! pcp_combine works again. Below is my
LD_LIBRARY_PATH
>
>
> *echo
> $LD_LIBRARY_PATH/lib:/export-5/ncosrvnfs-
cp/nawips2/os/linux2.6.32_x86_64/lib:/opt/MET6/external_libs/lib:/usr/lib:/usr/lib64:/opt/MET6/external_libs:/opt/MET6/external_libs/lib*
>
> Unfortunately, our original problem remains. I use pcp_combine,
> regrid_data_plane and then mode. Below is my error output from mode:
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
>
> */opt/MET6/met6.0/bin/mode /usr1/wpc_cpgffh/gribs//temp/2016062300
> <(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc
> /usr1/wpc_cpgffh/gribs//temp/2016062300
> <(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc
> /export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_USE_SAMP_f24_p6_t0.5
> -outdir /usr1/wpc_cpgffh/gribs//temp/2016062300
> <(201)%20606-2300>_preacc_6_MODEdailyDEBUG 1: Default Config File:
> /opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG 1: Match
Config
> File:
> /export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_USE_SAMP_f24_p6_t0.5DEBUG
> 1: Merge Config File:
> /export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_USE_SAMP_f24_p6_t0.5DEBUG
> 1: Forecast File: /usr1/wpc_cpgffh/gribs//temp/2016062300
> <(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.ncDEBUG 1:
> Observation File: /usr1/wpc_cpgffh/gribs//temp/2016062300
> <(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.ncERROR :
ERROR
> : setup_fcst_obs_data() -> can't get data from file
> "/usr1/wpc_cpgffh/gribs//temp/2016062300
> <(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc"ERROR
:
> HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0: #000:
H5T.c
> line 1723 in H5Tclose(): not a datatype major: Invalid arguments
to
> routine minor: Inappropriate typeNetCDF: HDF errorfile:
ncFile.cpp
> line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0:
#000:
> H5T.c line 1723 in H5Tclose(): not a datatype major: Invalid
arguments
> to routine minor: Inappropriate typeNetCDF: HDF errorfile:
ncFile.cpp
> line:33*
>
> Thanks!
>
> Mike
>
> On Fri, Apr 21, 2017 at 5:26 PM, John Halley Gotway via RT <
> met_help at ucar.edu> wrote:
>
>> Mike,
>>
>> I see that I sent you the wrong command last time, sorry!
>>
>> setenv LD_LIBRARY_PATH
/opt/MET6/external_libs/lib:${LD_LIBRARY_PATH}
>>
>> Please check to see if this file exists:
>> ls /opt/MET6/external_libs/lib/libnetcdf_c++4.so.1
>>
>> Hopefully it does, and the setting I listed above will work.
>>
>> John
>>
>> On Fri, Apr 21, 2017 at 2:48 PM, Michael Erickson - NOAA Affiliate
via RT
>> <
>> met_help at ucar.edu> wrote:
>>
>> >
>> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
>> >
>> > Thanks John,
>> >
>> > I've removed all other instances of LD_LIBRARY_PATH other than
the one
>> you
>> > specified. I get:
>> >
>> > */opt/MET6/met6.0/bin/pcp_combine: error while loading shared
>> libraries:
>> > libnetcdf_c++4.so.1: cannot open shared object file: No such file
or
>> > directory*
>> >
>> > This error has been encountered occasionally. Should I try
linking to a
>> > netcdf library on my local machine?
>> >
>> > Mike
>> >
>> > On Fri, Apr 21, 2017 at 8:38 PM, John Halley Gotway via RT <
>> > met_help at ucar.edu> wrote:
>> >
>> > > Mike,
>> > >
>> > > If you haven't already, please try putting that in the first
position:
>> > > setenv LD_LIBRARY_PATH
/opt/MET6/external_libs:${LD_LIBRARY_PATH}
>> > >
>> > > The linker searches those paths in order. Does that change
anything?
>> > >
>> > > Thanks,
>> > > John
>> > >
>> > > On Fri, Apr 21, 2017 at 2:28 PM, Michael Erickson - NOAA
Affiliate via
>> > RT <
>> > > met_help at ucar.edu> wrote:
>> > >
>> > > >
>> > > > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226
>
>> > > >
>> > > > I believe the directory you're referring to is:
>> > > > /opt/MET6/external_libs/bin/. I've added that to
LD_LIBRARY_PATH,
>> but
>> > it
>> > > > still errors.
>> > > >
>> > > > Mike
>> > > >
>> > > > On Fri, Apr 21, 2017 at 8:12 PM, Michael Erickson - NOAA
Affiliate <
>> > > > michael.j.erickson at noaa.gov> wrote:
>> > > >
>> > > > > Thanks John,
>> > > > >
>> > > > > To answer your first question:
>> > > > >
>> > > > >
>> > > > >
>> > > > >
>> > > > > *echo
>> > > > > $LD_LIBRARY_PATH/lib:/export-5/ncosrvnfs-cp/nawips2/os/
>> > > > linux2.6.32_x86_64/lib:/usr/lib:/usr/lib64:/opt/MET6/
>> > > >
external_libs:/opt/MET6/external_libs/lib:/usr/lib64/openmpi/lib/*
>> > > > > To answer your second:
>> > > > >
>> > > > >
>> > > > >
>> > > > >
>> > > > > *grep MET_NETCDF /opt/MET6/met6.0/config.loggrep:
>> > > > > /opt/MET6/met6.0/config.log: No such file or directory*
>> > > > > However, MET_NETCDF is set to /opt/MET6/external_libs
>> > > > >
>> > > > > Hope that helps,
>> > > > >
>> > > > > Mike
>> > > > >
>> > > > > On Fri, Apr 21, 2017 at 6:23 PM, John Halley Gotway via RT
<
>> > > > > met_help at ucar.edu> wrote:
>> > > > >
>> > > > >> Mike,
>> > > > >>
>> > > > >> This looks to me like an issue with the environment. I
think
>> these
>> > > sort
>> > > > >> of
>> > > > >> issues are inevitable as we switch from using NetCDF3 to
NetCDF4.
>> > > > NetCDF4
>> > > > >> is built upon HDF5, so generally, you can interpret HDF5
errors
>> as
>> > > being
>> > > > >> problems with NetCDF.
>> > > > >>
>> > > > >> On theia, wcoss, and HPC machines as NCAR, we've begun
using
>> > > modulefiles
>> > > > >> (i.e. module load met/6.0) and those files set up the
>> environment in
>> > > the
>> > > > >> required way. But lacking that, we should just check how
you
>> have
>> > > > >> LD_LIBRARY_PATH set:
>> > > > >>
>> > > > >> echo $LD_LIBRARY_PATH
>> > > > >>
>> > > > >> That environment variables needs to include the
directories
>> > containing
>> > > > the
>> > > > >> NetCDF and HDF5 libraries (usually, I've seen them placed
into
>> the
>> > > same
>> > > > >> directory).
>> > > > >>
>> > > > >> Try running:
>> > > > >> grep MET_NETCDF /opt/MET6/met6.0/config.log
>> > > > >>
>> > > > >> Hopefully, that'll tell us where the NetCDF library used
to
>> compile
>> > > MET
>> > > > >> actually lives on your system.
>> > > > >>
>> > > > >> Thanks,
>> > > > >> John
>> > > > >>
>> > > > >>
>> > > > >>
>> > > > >> On Fri, Apr 21, 2017 at 12:15 PM, Michael Erickson - NOAA
>> Affiliate
>> > > via
>> > > > >> RT <
>> > > > >> met_help at ucar.edu> wrote:
>> > > > >>
>> > > > >> >
>> > > > >> > <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226
>> >
>> > > > >> >
>> > > > >> > Hi All,
>> > > > >> >
>> > > > >> > I tried doing a similar thing with MODE. Similar to MTD,
>> > pcp_combine
>> > > > and
>> > > > >> > regrid_data_plan are run first. The error is below:
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> >
>> > > > >> > */opt/MET6/met6.0/bin/mode
>> > > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300_
>> > > > preacc_6_MODEdaily/HRRRv3_TLE_
>> > > > >> > lag06_f6.nc
>> > > > >> >
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
>> > > > >> > HRRRv3_TLE_lag06_f6.nc
>> > > > >> > /export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_USE_
>> > > > >> SAMP_f24_p6_t0.5
>> > > > >> > -outdir /usr1/wpc_cpgffh/gribs//temp/2016062300
>> <(201)%20606-2300>
>> > <(201)%20606-2300>
>> > > > >> _preacc_6_MODEdailyDEBUG 1:
>> > > > >> > Default Config File:
>> > > > >> >
/opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG 1:
>> > Match
>> > > > >> Config
>> > > > >> > File:
>> > > > >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
>> > > > >> > USE_SAMP_f24_p6_t0.5DEBUG
>> > > > >> > 1: Merge Config File:
>> > > > >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
>> > > > >> > USE_SAMP_f24_p6_t0.5DEBUG
>> > > > >> > 1: Forecast File:
>> > > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
>> <(201)%20606-2300>
>> > > > >> _preacc_6_MODEdaily/
>> > > > >> > HRRRv3_TLE_lag06_f6.ncDEBUG
>> > > > >> > 1: Observation File:
>> > > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
>> <(201)%20606-2300>
>> > > > >> _preacc_6_MODEdaily/
>> > > > >> > HRRRv3_TLE_lag06_f6.ncERROR
>> > > > >> > : ERROR : setup_fcst_obs_data() -> can't get data from
file
>> > > > >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
>> _preacc_6_MODEdaily/
>> > > > >> > HRRRv3_TLE_lag06_f6.nc"ERROR
>> > > > >> > : HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1)
thread 0:
>> > #000:
>> > > > >> H5T.c
>> > > > >> > line 1723 in H5Tclose(): not a datatype major:
Invalid
>> > arguments
>> > > to
>> > > > >> > routine minor: Inappropriate typeNetCDF: HDF
errorfile:
>> > > ncFile.cpp
>> > > > >> > line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1)
>> thread 0:
>> > > > >> #000:
>> > > > >> > H5T.c line 1723 in H5Tclose(): not a datatype major:
Invalid
>> > > > >> arguments
>> > > > >> > to routine minor: Inappropriate typeNetCDF: HDF
errorfile:
>> > > > ncFile.cpp
>> > > > >> > line:33*
>> > > > >> > Looks to be HDF related. Thanks!
>> > > > >> >
>> > > > >> > Mike
>> > > > >> >
>> > > > >> >
>> > > > >> > On Fri, Apr 21, 2017 at 1:58 PM, Michael Erickson - NOAA
>> > Affiliate <
>> > > > >> > michael.j.erickson at noaa.gov> wrote:
>> > > > >> >
>> > > > >> > > Thanks Tara!
>> > > > >> > >
>> > > > >> > > On Fri, Apr 21, 2017 at 1:45 PM, Tara Jensen via RT <
>> > > > >> met_help at ucar.edu>
>> > > > >> > > wrote:
>> > > > >> > >
>> > > > >> > >> John, I'll grab the data in a little bit and put it
on
>> dakota.
>> > > > >> > >>
>> > > > >> > >> Cheers, Tara
>> > > > >> > >>
>> > > > >> > >> On Apr 21, 2017 7:22 AM, "Michael Erickson - NOAA
Affiliate
>> via
>> > > > RT" <
>> > > > >> > >> met_help at ucar.edu> wrote:
>> > > > >> > >>
>> > > > >> > >> >
>> > > > >> > >> > <URL: https://rt.rap.ucar.edu/rt/
>> > Ticket/Display.html?id=80226
>> > > >
>> > > > >> > >> >
>> > > > >> > >> > Hi John,
>> > > > >> > >> >
>> > > > >> > >> > To explain my problem better...my code is able to
run
>> METv5.1
>> > > but
>> > > > >> not
>> > > > >> > >> > METv6.0. The exe files used are 'pcp_combine',
>> > > > 'regrid_data_plane'
>> > > > >> and
>> > > > >> > >> then
>> > > > >> > >> > 'mtd,' In METv6.0 'pcp_combine' converts grib2 to
netcdf,
>> but
>> > > > with
>> > > > >> the
>> > > > >> > >> > warnings mentioned earlier and with netcdf files
that are
>> not
>> > > > >> readable
>> > > > >> > >> by
>> > > > >> > >> > ncdump. 'regrid_data_plane' also works, but 'mtd'
does
>> not.
>> > The
>> > > > >> error
>> > > > >> > >> with
>> > > > >> > >> > 'mtd' is shown below, but I've found this mtd error
output
>> > > occurs
>> > > > >> even
>> > > > >> > >> if
>> > > > >> > >> > the issue is something else. In this case, I
believe mtd
>> is
>> > > > unable
>> > > > >> to
>> > > > >> > >> read
>> > > > >> > >> > the netcdf file.
>> > > > >> > >> >
>> > > > >> > >> > Unfortunately I don't have access to theia. I'm not
sure
>> how
>> > I
>> > > > can
>> > > > >> > give
>> > > > >> > >> you
>> > > > >> > >> > the files. I do not have ftp, the sftp command
fails, and
>> the
>> > > scp
>> > > > >> > >> command
>> > > > >> > >> > may work but I can not create my own folder on your
>> server a
>> > > > >> priori. I
>> > > > >> > >> > shared some data with Tara over google drive
through her
>> noaa
>> > > > >> account.
>> > > > >> > >> It
>> > > > >> > >> > contains forecast hours 1-6 of a sample "model" and
>> > > "observation"
>> > > > >> > >> created
>> > > > >> > >> > using METv6.0. This is after 'pcp_combine' and
>> > > > 'regrid_data_plane'
>> > > > >> > were
>> > > > >> > >> > run, but before 'mtd.'
>> > > > >> > >> >
>> > > > >> > >> > Thanks for your help and sorry for the round about
way of
>> > > sharing
>> > > > >> > data.
>> > > > >> > >> >
>> > > > >> > >> >
>> > > > >> > >> >
>> > > > >> > >> >
>> > > > >> > >> >
>> > > > >> > >> >
>> > > > >> > >> > *DEBUG 2: mtd_read_data() -> processing file
>> > > > >> > >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300
>> <(201)%20606-2300> <(201)%20606-2300>
>> > > > >> _preacc_1_MTDdaily/
>> > > > >> > >> > HRRRv3_TLE_lag06_f1.nc"ERROR
>> > > > >> > >> > : ERROR : ERROR : mtd_read_data() -> unable to
get
>> data
>> > > plane
>> > > > >> at
>> > > > >> > >> time
>> > > > >> > >> > 0ERROR : *
>> > > > >> > >> >
>> > > > >> > >> > Mike
>> > > > >> > >> >
>> > > > >> > >> > On Fri, Apr 21, 2017 at 12:06 PM, Michael Erickson
- NOAA
>> > > > >> Affiliate <
>> > > > >> > >> > michael.j.erickson at noaa.gov> wrote:
>> > > > >> > >> >
>> > > > >> > >> > > Hi John,
>> > > > >> > >> > >
>> > > > >> > >> > > Lets see if this works.
>> > > > >> > >> > >
>> > > > >> > >> > > Mike
>> > > > >> > >> > >
>> > > > >> > >> > > On Thu, Apr 20, 2017 at 8:31 PM, Michael Erickson
- NOAA
>> > > > >> Affiliate <
>> > > > >> > >> > > michael.j.erickson at noaa.gov> wrote:
>> > > > >> > >> > >
>> > > > >> > >> > >> Hi John,
>> > > > >> > >> > >>
>> > > > >> > >> > >> Thank you for your helpful response.
Unfortunately, I
>> do
>> > not
>> > > > >> have
>> > > > >> > >> ftp on
>> > > > >> > >> > >> my linux system. Would you mind if I attached
the file
>> > here?
>> > > > >> > >> > >>
>> > > > >> > >> > >> Mike
>> > > > >> > >> > >>
>> > > > >> > >> > >> On Thu, Apr 20, 2017 at 8:17 PM, John Halley
Gotway via
>> > RT <
>> > > > >> > >> > >> met_help at ucar.edu> wrote:
>> > > > >> > >> > >>
>> > > > >> > >> > >>> Mike,
>> > > > >> > >> > >>>
>> > > > >> > >> > >>> We just posted the first set of bugfixes for
met-6.0
>> > here:
>> > > > >> > >> > >>> http://www.dtcenter.org/met/us
>> ers/support/known_issues/
>> > > > >> > >> > METv6.0/index.php
>> > > > >> > >> > >>>
>> > > > >> > >> > >>> One of them changes those warnings to debug(3)
level
>> > > messages
>> > > > >> > >> instead.
>> > > > >> > >> > >>>
>> > > > >> > >> > >>> Basically, we realized the logic for when/how
to do
>> GRIB
>> > > > table
>> > > > >> > >> lookups
>> > > > >> > >> > >>> differs in the MET library code for GRIB1 and
GRIB2.
>> We
>> > > > >> > considered
>> > > > >> > >> > using
>> > > > >> > >> > >>> the patch to make it consistent, but decided
that that
>> > was
>> > > > too
>> > > > >> big
>> > > > >> > >> of a
>> > > > >> > >> > >>> change and had the potential of introducing
more bugs.
>> > > > >> Instead,
>> > > > >> > >> we'll
>> > > > >> > >> > >>> make
>> > > > >> > >> > >>> it consistent in version 6.1. The easier
choice was
>> just
>> > > > >> > >> downgrading
>> > > > >> > >> > >>> that
>> > > > >> > >> > >>> warning.
>> > > > >> > >> > >>>
>> > > > >> > >> > >>> Ultimately though, the bigger concern is the
output of
>> > > > >> > pcp_combine.
>> > > > >> > >> > MET
>> > > > >> > >> > >>> version 6.0 includes a major change from
NetCDF3 to
>> > > NetCDF4.
>> > > > >> But
>> > > > >> > of
>> > > > >> > >> > >>> course, the other MET tools should be able to
read it.
>> > > > >> > >> > >>>
>> > > > >> > >> > >>> You could post that output file to our
anonymous ftp
>> site
>> > > > and I
>> > > > >> > >> could
>> > > > >> > >> > >>> take
>> > > > >> > >> > >>> a look:
>> > > > >> > >> > >>> /usr1/wpc_cpgffh/gribs//temp/2016062300
>> <(201)%20606-2300>
>> > <(201)%20606-2300>
>> > > > >> <(201)%20606-2300>
>> > > > >> > >> > >>> _preacc_1_MTDdaily/ST4_lag00.nc
>> > > > >> > >> > >>>
>> > > > >> > >> > >>> Here's instructions for that:
>> > > > >> > >> > >>> http://www.dtcenter.org/met/
>> > users/support/met_help.php#ftp
>> > > > >> > >> > >>>
>> > > > >> > >> > >>> Thanks,
>> > > > >> > >> > >>> John
>> > > > >> > >> > >>>
>> > > > >> > >> > >>>
>> > > > >> > >> > >>>
>> > > > >> > >> > >>> On Thu, Apr 20, 2017 at 2:10 PM, Michael
Erickson -
>> NOAA
>> > > > >> Affiliate
>> > > > >> > >> via
>> > > > >> > >> > >>> RT <
>> > > > >> > >> > >>> met_help at ucar.edu> wrote:
>> > > > >> > >> > >>>
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> > Thu Apr 20 14:10:51 2017: Request 80226 was
acted
>> upon.
>> > > > >> > >> > >>> > Transaction: Ticket created by
>> > > michael.j.erickson at noaa.gov
>> > > > >> > >> > >>> > Queue: met_help
>> > > > >> > >> > >>> > Subject: Grib2 Table Issue at WPC
>> > > > >> > >> > >>> > Owner: Nobody
>> > > > >> > >> > >>> > Requestors: michael.j.erickson at noaa.gov
>> > > > >> > >> > >>> > Status: new
>> > > > >> > >> > >>> > Ticket <URL: https://rt.rap.ucar.edu/rt/
>> > > > >> > >> > Ticket/Display.html?id=80226
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> > Good afternoon,
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> > I am testing the newest version of METv6.0
>> installed by
>> > > NCO
>> > > > >> at
>> > > > >> > WPC
>> > > > >> > >> > >>> with the
>> > > > >> > >> > >>> > aid of John Halley Gotway.
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> > I noticed some odd warnings when using
pcp_combine
>> to
>> > sum
>> > > > >> > >> > >>> precipitation and
>> > > > >> > >> > >>> > convert grib2 to netcdf. They are listed
below:
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> > */opt/MET6/met6.0/bin/pcp_combine -sum
>> > 00000000_000000 1
>> > > > >> > >> > >>> 20160623_010000
>> > > > >> > >> > >>> > 01
>> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
>> <(201)%20606-2300>
>> > > <(201)%20606-2300>
>> > > > >> > >> _preacc_1_MTDdaily/
>> > > > >> > >> > ST4_lag00.nc
>> > > > >> > >> > >>> > -pcpdir
/usr1/wpc_cpgffh/gribs//temp/2016062300
>> <(201)%20606-2300>
>> > > > >> > >> <(201)%20606-2300>_preacc_1_MTDdaily/WA
>> > > > >> > >> > >>> RNING:
>> > > > >> > >> > >>> > WARNING: Multiple GRIB2 table entries match
lookup
>> > > criteria
>> > > > >> > >> > (parm_name
>> > > > >> > >> > >>> =
>> > > > >> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a =
0,
>> > > grib2_mtab =
>> > > > >> 1,
>> > > > >> > >> > >>> grib2_cntr =
>> > > > >> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
>> > > > >> parm_name:
>> > > > >> > >> > APCP,
>> > > > >> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr =
57,
>> > > grib2_ltab =
>> > > > >> 0,
>> > > > >> > >> > index_b
>> > > > >> > >> > >>> = 1,
>> > > > >> > >> > >>> > index_c = 8WARNING: parm_name: APCP,
index_a = 0,
>> > > > >> grib2_mtab =
>> > > > >> > >> 14,
>> > > > >> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1,
>> index_c =
>> > > > >> > 8WARNING:
>> > > > >> > >> > >>> Using:
>> > > > >> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1,
>> > grib2_cntr
>> > > =
>> > > > 0,
>> > > > >> > >> > >>> grib2_ltab =
>> > > > >> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1:
[1]
>> File
>> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
>> <(201)%20606-2300>
>> > > <(201)%20606-2300>
>> > > > >> <(201)%20606-2300>
>> > > > >> > >> > >>> _preacc_1_MTDdaily//
>> > > > >> > >> > >>> > ST4.2016062301 <(201)%20606-2301>
>> <(201)%20606-2301>
>> > <(201)%20606-2301>.01h
>> > > > >> > >> > >>> > matches valid time of 20160623_010000DEBUG 1:
[1]
>> > Reading
>> > > > >> input
>> > > > >> > >> file:
>> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
>> <(201)%20606-2300>
>> > > <(201)%20606-2300>
>> > > > >> _preacc_1_MTDdaily//
>> > > > >> > >> > >>> > ST4.2016062301 <(201)%20606-2301>
>> <(201)%20606-2301>.01hWARNING:
>> > > > >> > >> > >>> > WARNING: Multiple GRIB2 table entries match
lookup
>> > > criteria
>> > > > >> > >> > (parm_name
>> > > > >> > >> > >>> =
>> > > > >> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a =
0,
>> > > grib2_mtab =
>> > > > >> 1,
>> > > > >> > >> > >>> grib2_cntr =
>> > > > >> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c =
8WARNING:
>> > > > >> parm_name:
>> > > > >> > >> > APCP,
>> > > > >> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr =
57,
>> > > grib2_ltab =
>> > > > >> 0,
>> > > > >> > >> > index_b
>> > > > >> > >> > >>> = 1,
>> > > > >> > >> > >>> > index_c = 8WARNING: parm_name: APCP,
index_a = 0,
>> > > > >> grib2_mtab =
>> > > > >> > >> 14,
>> > > > >> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b = 1,
>> index_c =
>> > > > >> > 8WARNING:
>> > > > >> > >> > >>> Using:
>> > > > >> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab = 1,
>> > grib2_cntr
>> > > =
>> > > > 0,
>> > > > >> > >> > >>> grib2_ltab =
>> > > > >> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG 1:
Writing
>> > > output
>> > > > >> > file:
>> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
>> <(201)%20606-2300>
>> > > <(201)%20606-2300>
>> > > > >> > >> _preacc_1_MTDdaily/
>> > > > >> > >> > ST4_lag00.nc
>> > > > >> > >> > >>> *
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> > The resulting file, ST4_lag00.nc contains
data, but
>> is
>> > > not
>> > > > >> > >> readable
>> > > > >> > >> > >>> when
>> > > > >> > >> > >>> > using the 'ncdump' command or when running
'mtd.'
>> Note
>> > > that
>> > > > >> the
>> > > > >> > >> same
>> > > > >> > >> > >>> > commands work when using METv5.1. This
appears to
>> be an
>> > > > issue
>> > > > >> > with
>> > > > >> > >> > the
>> > > > >> > >> > >>> > grib2 tables, but I wanted to be sure.
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> > Thank you for your help.
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> > Mike
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> > --
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> > Michael J. Erickson, Ph.D
>> > > > >> > >> > >>> > Cooperative Institute for Research in
Environmental
>> > > > Sciences
>> > > > >> > >> (CIRES)
>> > > > >> > >> > >>> > CIRES Contractor for the Weather Prediction
Center
>> > (WPC)
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> > Phone: 301-683-1546 <(301)%20683-1546>
>> <(301)%20683-1546>
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>> >
>> > > > >> > >> > >>>
>> > > > >> > >> > >>>
>> > > > >> > >> > >>
>> > > > >> > >> > >>
>> > > > >> > >> > >> --
>> > > > >> > >> > >>
>> > > > >> > >> > >> Michael J. Erickson, Ph.D
>> > > > >> > >> > >> Cooperative Institute for Research in
Environmental
>> > Sciences
>> > > > >> > (CIRES)
>> > > > >> > >> > >> CIRES Contractor for the Weather Prediction
Center
>> (WPC)
>> > > > >> > >> > >>
>> > > > >> > >> > >> Phone: 301-683-1546 <(301)%20683-1546>
>> <(301)%20683-1546>
>> > > > >> > >> > >>
>> > > > >> > >> > >>
>> > > > >> > >> > >
>> > > > >> > >> > >
>> > > > >> > >> > > --
>> > > > >> > >> > >
>> > > > >> > >> > > Michael J. Erickson, Ph.D
>> > > > >> > >> > > Cooperative Institute for Research in
Environmental
>> > Sciences
>> > > > >> (CIRES)
>> > > > >> > >> > > CIRES Contractor for the Weather Prediction
Center (WPC)
>> > > > >> > >> > >
>> > > > >> > >> > > Phone: 301-683-1546 <(301)%20683-1546>
>> <(301)%20683-1546>
>> > > > >> > >> > >
>> > > > >> > >> > >
>> > > > >> > >> >
>> > > > >> > >> >
>> > > > >> > >> > --
>> > > > >> > >> >
>> > > > >> > >> > Michael J. Erickson, Ph.D
>> > > > >> > >> > Cooperative Institute for Research in Environmental
>> Sciences
>> > > > >> (CIRES)
>> > > > >> > >> > CIRES Contractor for the Weather Prediction Center
(WPC)
>> > > > >> > >> >
>> > > > >> > >> > Phone: 301-683-1546 <(301)%20683-1546>
>> > > > >> > >> >
>> > > > >> > >> >
>> > > > >> > >>
>> > > > >> > >>
>> > > > >> > >
>> > > > >> > >
>> > > > >> > > --
>> > > > >> > >
>> > > > >> > > Michael J. Erickson, Ph.D
>> > > > >> > > Cooperative Institute for Research in Environmental
Sciences
>> > > (CIRES)
>> > > > >> > > CIRES Contractor for the Weather Prediction Center
(WPC)
>> > > > >> > >
>> > > > >> > > Phone: 301-683-1546 <(301)%20683-1546> <(301)%20683-
1546>
>> > > > >> > >
>> > > > >> > >
>> > > > >> >
>> > > > >> >
>> > > > >> > --
>> > > > >> >
>> > > > >> > Michael J. Erickson, Ph.D
>> > > > >> > Cooperative Institute for Research in Environmental
Sciences
>> > (CIRES)
>> > > > >> > CIRES Contractor for the Weather Prediction Center (WPC)
>> > > > >> >
>> > > > >> > Phone: 301-683-1546 <(301)%20683-1546>
>> > > > >> >
>> > > > >> >
>> > > > >>
>> > > > >>
>> > > > >
>> > > > >
>> > > > > --
>> > > > >
>> > > > > Michael J. Erickson, Ph.D
>> > > > > Cooperative Institute for Research in Environmental
Sciences
>> (CIRES)
>> > > > > CIRES Contractor for the Weather Prediction Center (WPC)
>> > > > >
>> > > > > Phone: 301-683-1546 <(301)%20683-1546> <(301)%20683-1546>
>> > > > >
>> > > > >
>> > > >
>> > > >
>> > > > --
>> > > >
>> > > > Michael J. Erickson, Ph.D
>> > > > Cooperative Institute for Research in Environmental Sciences
(CIRES)
>> > > > CIRES Contractor for the Weather Prediction Center (WPC)
>> > > >
>> > > > Phone: 301-683-1546 <(301)%20683-1546>
>> > > >
>> > > >
>> > >
>> > >
>> >
>> >
>> > --
>> >
>> > Michael J. Erickson, Ph.D
>> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
>> > CIRES Contractor for the Weather Prediction Center (WPC)
>> >
>> > Phone: 301-683-1546 <(301)%20683-1546>
>> >
>> >
>>
>>
>
>
> --
>
> Michael J. Erickson, Ph.D
> Cooperative Institute for Research in Environmental Sciences (CIRES)
> CIRES Contractor for the Weather Prediction Center (WPC)
>
> Phone: 301-683-1546 <(301)%20683-1546>
>
>
--
Michael J. Erickson, Ph.D
Cooperative Institute for Research in Environmental Sciences (CIRES)
CIRES Contractor for the Weather Prediction Center (WPC)
Phone: 301-683-1546
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: John Halley Gotway
Time: Tue Apr 25 07:23:00 2017
Mike,
I'm at NCWCP for the MET tutorial this week. Perhaps I could just
come up
to your office during a break or after we're done for the day, and we
could
debug? But I'd need a NOAA escort.
Thanks,
John
On Tue, Apr 25, 2017 at 8:51 AM, Michael Erickson - NOAA Affiliate via
RT <
met_help at ucar.edu> wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
>
> Hi John,
>
> I am still unable to resolve the HDF problem I emailed you
yesterday. Note
> that on our netapp there are two versions of MET, METv5.1 at
/opt/MET and
> METv6.0 at /opt/MET6. I noticed that the libnetcdf instructions,
located at
> /opt/MET6/external_libs/lib/libhdf5.settings references the old
version of
> MET located at /opt/MET/. Is this a potential problem?
>
> Thanks,
>
> Mike
>
> On Mon, Apr 24, 2017 at 12:49 PM, Michael Erickson - NOAA Affiliate
<
> michael.j.erickson at noaa.gov> wrote:
>
> > Hey John,
> >
> > No worries and thanks! pcp_combine works again. Below is my
> LD_LIBRARY_PATH
> >
> >
> > *echo
> > $LD_LIBRARY_PATH/lib:/export-5/ncosrvnfs-cp/nawips2/os/
> linux2.6.32_x86_64/lib:/opt/MET6/external_libs/lib:/usr/
> lib:/usr/lib64:/opt/MET6/external_libs:/opt/MET6/external_libs/lib*
> >
> > Unfortunately, our original problem remains. I use pcp_combine,
> > regrid_data_plane and then mode. Below is my error output from
mode:
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> >
> > */opt/MET6/met6.0/bin/mode /usr1/wpc_cpgffh/gribs//temp/2016062300
> > <(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc
> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> > <(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc
> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> USE_SAMP_f24_p6_t0.5
> > -outdir /usr1/wpc_cpgffh/gribs//temp/2016062300
> > <(201)%20606-2300>_preacc_6_MODEdailyDEBUG 1: Default Config File:
> > /opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG 1: Match
> Config
> > File:
> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> USE_SAMP_f24_p6_t0.5DEBUG
> > 1: Merge Config File:
> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> USE_SAMP_f24_p6_t0.5DEBUG
> > 1: Forecast File: /usr1/wpc_cpgffh/gribs//temp/2016062300
> > <(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.ncDEBUG
1:
> > Observation File: /usr1/wpc_cpgffh/gribs//temp/2016062300
> > <(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.ncERROR
:
> ERROR
> > : setup_fcst_obs_data() -> can't get data from file
> > "/usr1/wpc_cpgffh/gribs//temp/2016062300
> > <(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc"ERROR
:
> > HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0: #000:
H5T.c
> > line 1723 in H5Tclose(): not a datatype major: Invalid
arguments to
> > routine minor: Inappropriate typeNetCDF: HDF errorfile:
ncFile.cpp
> > line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0:
#000:
> > H5T.c line 1723 in H5Tclose(): not a datatype major: Invalid
arguments
> > to routine minor: Inappropriate typeNetCDF: HDF errorfile:
ncFile.cpp
> > line:33*
> >
> > Thanks!
> >
> > Mike
> >
> > On Fri, Apr 21, 2017 at 5:26 PM, John Halley Gotway via RT <
> > met_help at ucar.edu> wrote:
> >
> >> Mike,
> >>
> >> I see that I sent you the wrong command last time, sorry!
> >>
> >> setenv LD_LIBRARY_PATH
/opt/MET6/external_libs/lib:${LD_LIBRARY_PATH}
> >>
> >> Please check to see if this file exists:
> >> ls /opt/MET6/external_libs/lib/libnetcdf_c++4.so.1
> >>
> >> Hopefully it does, and the setting I listed above will work.
> >>
> >> John
> >>
> >> On Fri, Apr 21, 2017 at 2:48 PM, Michael Erickson - NOAA
Affiliate via
> RT
> >> <
> >> met_help at ucar.edu> wrote:
> >>
> >> >
> >> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> >> >
> >> > Thanks John,
> >> >
> >> > I've removed all other instances of LD_LIBRARY_PATH other than
the one
> >> you
> >> > specified. I get:
> >> >
> >> > */opt/MET6/met6.0/bin/pcp_combine: error while loading shared
> >> libraries:
> >> > libnetcdf_c++4.so.1: cannot open shared object file: No such
file or
> >> > directory*
> >> >
> >> > This error has been encountered occasionally. Should I try
linking to
> a
> >> > netcdf library on my local machine?
> >> >
> >> > Mike
> >> >
> >> > On Fri, Apr 21, 2017 at 8:38 PM, John Halley Gotway via RT <
> >> > met_help at ucar.edu> wrote:
> >> >
> >> > > Mike,
> >> > >
> >> > > If you haven't already, please try putting that in the first
> position:
> >> > > setenv LD_LIBRARY_PATH
/opt/MET6/external_libs:${LD_LIBRARY_PATH}
> >> > >
> >> > > The linker searches those paths in order. Does that change
> anything?
> >> > >
> >> > > Thanks,
> >> > > John
> >> > >
> >> > > On Fri, Apr 21, 2017 at 2:28 PM, Michael Erickson - NOAA
Affiliate
> via
> >> > RT <
> >> > > met_help at ucar.edu> wrote:
> >> > >
> >> > > >
> >> > > > <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> >> > > >
> >> > > > I believe the directory you're referring to is:
> >> > > > /opt/MET6/external_libs/bin/. I've added that to
LD_LIBRARY_PATH,
> >> but
> >> > it
> >> > > > still errors.
> >> > > >
> >> > > > Mike
> >> > > >
> >> > > > On Fri, Apr 21, 2017 at 8:12 PM, Michael Erickson - NOAA
> Affiliate <
> >> > > > michael.j.erickson at noaa.gov> wrote:
> >> > > >
> >> > > > > Thanks John,
> >> > > > >
> >> > > > > To answer your first question:
> >> > > > >
> >> > > > >
> >> > > > >
> >> > > > >
> >> > > > > *echo
> >> > > > > $LD_LIBRARY_PATH/lib:/export-5/ncosrvnfs-cp/nawips2/os/
> >> > > > linux2.6.32_x86_64/lib:/usr/lib:/usr/lib64:/opt/MET6/
> >> > > > external_libs:/opt/MET6/external_libs/lib:/usr/lib64/
> openmpi/lib/*
> >> > > > > To answer your second:
> >> > > > >
> >> > > > >
> >> > > > >
> >> > > > >
> >> > > > > *grep MET_NETCDF /opt/MET6/met6.0/config.loggrep:
> >> > > > > /opt/MET6/met6.0/config.log: No such file or directory*
> >> > > > > However, MET_NETCDF is set to /opt/MET6/external_libs
> >> > > > >
> >> > > > > Hope that helps,
> >> > > > >
> >> > > > > Mike
> >> > > > >
> >> > > > > On Fri, Apr 21, 2017 at 6:23 PM, John Halley Gotway via
RT <
> >> > > > > met_help at ucar.edu> wrote:
> >> > > > >
> >> > > > >> Mike,
> >> > > > >>
> >> > > > >> This looks to me like an issue with the environment. I
think
> >> these
> >> > > sort
> >> > > > >> of
> >> > > > >> issues are inevitable as we switch from using NetCDF3 to
> NetCDF4.
> >> > > > NetCDF4
> >> > > > >> is built upon HDF5, so generally, you can interpret HDF5
errors
> >> as
> >> > > being
> >> > > > >> problems with NetCDF.
> >> > > > >>
> >> > > > >> On theia, wcoss, and HPC machines as NCAR, we've begun
using
> >> > > modulefiles
> >> > > > >> (i.e. module load met/6.0) and those files set up the
> >> environment in
> >> > > the
> >> > > > >> required way. But lacking that, we should just check
how you
> >> have
> >> > > > >> LD_LIBRARY_PATH set:
> >> > > > >>
> >> > > > >> echo $LD_LIBRARY_PATH
> >> > > > >>
> >> > > > >> That environment variables needs to include the
directories
> >> > containing
> >> > > > the
> >> > > > >> NetCDF and HDF5 libraries (usually, I've seen them
placed into
> >> the
> >> > > same
> >> > > > >> directory).
> >> > > > >>
> >> > > > >> Try running:
> >> > > > >> grep MET_NETCDF /opt/MET6/met6.0/config.log
> >> > > > >>
> >> > > > >> Hopefully, that'll tell us where the NetCDF library used
to
> >> compile
> >> > > MET
> >> > > > >> actually lives on your system.
> >> > > > >>
> >> > > > >> Thanks,
> >> > > > >> John
> >> > > > >>
> >> > > > >>
> >> > > > >>
> >> > > > >> On Fri, Apr 21, 2017 at 12:15 PM, Michael Erickson -
NOAA
> >> Affiliate
> >> > > via
> >> > > > >> RT <
> >> > > > >> met_help at ucar.edu> wrote:
> >> > > > >>
> >> > > > >> >
> >> > > > >> > <URL: https://rt.rap.ucar.edu/rt/
> Ticket/Display.html?id=80226
> >> >
> >> > > > >> >
> >> > > > >> > Hi All,
> >> > > > >> >
> >> > > > >> > I tried doing a similar thing with MODE. Similar to
MTD,
> >> > pcp_combine
> >> > > > and
> >> > > > >> > regrid_data_plan are run first. The error is below:
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> > */opt/MET6/met6.0/bin/mode
> >> > > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300_
> >> > > > preacc_6_MODEdaily/HRRRv3_TLE_
> >> > > > >> > lag06_f6.nc
> >> > > > >> >
/usr1/wpc_cpgffh/gribs//temp/2016062300_preacc_6_MODEdaily/
> >> > > > >> > HRRRv3_TLE_lag06_f6.nc
> >> > > > >> > /export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_USE_
> >> > > > >> SAMP_f24_p6_t0.5
> >> > > > >> > -outdir /usr1/wpc_cpgffh/gribs//temp/2016062300
> >> <(201)%20606-2300>
> >> > <(201)%20606-2300>
> >> > > > >> _preacc_6_MODEdailyDEBUG 1:
> >> > > > >> > Default Config File:
> >> > > > >> >
/opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG 1:
> >> > Match
> >> > > > >> Config
> >> > > > >> > File:
> >> > > > >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> >> > > > >> > USE_SAMP_f24_p6_t0.5DEBUG
> >> > > > >> > 1: Merge Config File:
> >> > > > >> > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> >> > > > >> > USE_SAMP_f24_p6_t0.5DEBUG
> >> > > > >> > 1: Forecast File:
> >> > > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> >> <(201)%20606-2300>
> >> > > > >> _preacc_6_MODEdaily/
> >> > > > >> > HRRRv3_TLE_lag06_f6.ncDEBUG
> >> > > > >> > 1: Observation File:
> >> > > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> >> <(201)%20606-2300>
> >> > > > >> _preacc_6_MODEdaily/
> >> > > > >> > HRRRv3_TLE_lag06_f6.ncERROR
> >> > > > >> > : ERROR : setup_fcst_obs_data() -> can't get data
from file
> >> > > > >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300 <(201)%20606-
2300>
> >> _preacc_6_MODEdaily/
> >> > > > >> > HRRRv3_TLE_lag06_f6.nc"ERROR
> >> > > > >> > : HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1)
thread 0:
> >> > #000:
> >> > > > >> H5T.c
> >> > > > >> > line 1723 in H5Tclose(): not a datatype major:
Invalid
> >> > arguments
> >> > > to
> >> > > > >> > routine minor: Inappropriate typeNetCDF: HDF
errorfile:
> >> > > ncFile.cpp
> >> > > > >> > line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-
patch1)
> >> thread 0:
> >> > > > >> #000:
> >> > > > >> > H5T.c line 1723 in H5Tclose(): not a datatype
major:
> Invalid
> >> > > > >> arguments
> >> > > > >> > to routine minor: Inappropriate typeNetCDF: HDF
errorfile:
> >> > > > ncFile.cpp
> >> > > > >> > line:33*
> >> > > > >> > Looks to be HDF related. Thanks!
> >> > > > >> >
> >> > > > >> > Mike
> >> > > > >> >
> >> > > > >> >
> >> > > > >> > On Fri, Apr 21, 2017 at 1:58 PM, Michael Erickson -
NOAA
> >> > Affiliate <
> >> > > > >> > michael.j.erickson at noaa.gov> wrote:
> >> > > > >> >
> >> > > > >> > > Thanks Tara!
> >> > > > >> > >
> >> > > > >> > > On Fri, Apr 21, 2017 at 1:45 PM, Tara Jensen via RT
<
> >> > > > >> met_help at ucar.edu>
> >> > > > >> > > wrote:
> >> > > > >> > >
> >> > > > >> > >> John, I'll grab the data in a little bit and put
it on
> >> dakota.
> >> > > > >> > >>
> >> > > > >> > >> Cheers, Tara
> >> > > > >> > >>
> >> > > > >> > >> On Apr 21, 2017 7:22 AM, "Michael Erickson - NOAA
> Affiliate
> >> via
> >> > > > RT" <
> >> > > > >> > >> met_help at ucar.edu> wrote:
> >> > > > >> > >>
> >> > > > >> > >> >
> >> > > > >> > >> > <URL: https://rt.rap.ucar.edu/rt/
> >> > Ticket/Display.html?id=80226
> >> > > >
> >> > > > >> > >> >
> >> > > > >> > >> > Hi John,
> >> > > > >> > >> >
> >> > > > >> > >> > To explain my problem better...my code is able to
run
> >> METv5.1
> >> > > but
> >> > > > >> not
> >> > > > >> > >> > METv6.0. The exe files used are 'pcp_combine',
> >> > > > 'regrid_data_plane'
> >> > > > >> and
> >> > > > >> > >> then
> >> > > > >> > >> > 'mtd,' In METv6.0 'pcp_combine' converts grib2 to
> netcdf,
> >> but
> >> > > > with
> >> > > > >> the
> >> > > > >> > >> > warnings mentioned earlier and with netcdf files
that
> are
> >> not
> >> > > > >> readable
> >> > > > >> > >> by
> >> > > > >> > >> > ncdump. 'regrid_data_plane' also works, but 'mtd'
does
> >> not.
> >> > The
> >> > > > >> error
> >> > > > >> > >> with
> >> > > > >> > >> > 'mtd' is shown below, but I've found this mtd
error
> output
> >> > > occurs
> >> > > > >> even
> >> > > > >> > >> if
> >> > > > >> > >> > the issue is something else. In this case, I
believe mtd
> >> is
> >> > > > unable
> >> > > > >> to
> >> > > > >> > >> read
> >> > > > >> > >> > the netcdf file.
> >> > > > >> > >> >
> >> > > > >> > >> > Unfortunately I don't have access to theia. I'm
not sure
> >> how
> >> > I
> >> > > > can
> >> > > > >> > give
> >> > > > >> > >> you
> >> > > > >> > >> > the files. I do not have ftp, the sftp command
fails,
> and
> >> the
> >> > > scp
> >> > > > >> > >> command
> >> > > > >> > >> > may work but I can not create my own folder on
your
> >> server a
> >> > > > >> priori. I
> >> > > > >> > >> > shared some data with Tara over google drive
through her
> >> noaa
> >> > > > >> account.
> >> > > > >> > >> It
> >> > > > >> > >> > contains forecast hours 1-6 of a sample "model"
and
> >> > > "observation"
> >> > > > >> > >> created
> >> > > > >> > >> > using METv6.0. This is after 'pcp_combine' and
> >> > > > 'regrid_data_plane'
> >> > > > >> > were
> >> > > > >> > >> > run, but before 'mtd.'
> >> > > > >> > >> >
> >> > > > >> > >> > Thanks for your help and sorry for the round
about way
> of
> >> > > sharing
> >> > > > >> > data.
> >> > > > >> > >> >
> >> > > > >> > >> >
> >> > > > >> > >> >
> >> > > > >> > >> >
> >> > > > >> > >> >
> >> > > > >> > >> >
> >> > > > >> > >> > *DEBUG 2: mtd_read_data() -> processing file
> >> > > > >> > >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300
> >> <(201)%20606-2300> <(201)%20606-2300>
> >> > > > >> _preacc_1_MTDdaily/
> >> > > > >> > >> > HRRRv3_TLE_lag06_f1.nc"ERROR
> >> > > > >> > >> > : ERROR : ERROR : mtd_read_data() -> unable
to get
> >> data
> >> > > plane
> >> > > > >> at
> >> > > > >> > >> time
> >> > > > >> > >> > 0ERROR : *
> >> > > > >> > >> >
> >> > > > >> > >> > Mike
> >> > > > >> > >> >
> >> > > > >> > >> > On Fri, Apr 21, 2017 at 12:06 PM, Michael
Erickson -
> NOAA
> >> > > > >> Affiliate <
> >> > > > >> > >> > michael.j.erickson at noaa.gov> wrote:
> >> > > > >> > >> >
> >> > > > >> > >> > > Hi John,
> >> > > > >> > >> > >
> >> > > > >> > >> > > Lets see if this works.
> >> > > > >> > >> > >
> >> > > > >> > >> > > Mike
> >> > > > >> > >> > >
> >> > > > >> > >> > > On Thu, Apr 20, 2017 at 8:31 PM, Michael
Erickson -
> NOAA
> >> > > > >> Affiliate <
> >> > > > >> > >> > > michael.j.erickson at noaa.gov> wrote:
> >> > > > >> > >> > >
> >> > > > >> > >> > >> Hi John,
> >> > > > >> > >> > >>
> >> > > > >> > >> > >> Thank you for your helpful response.
Unfortunately, I
> >> do
> >> > not
> >> > > > >> have
> >> > > > >> > >> ftp on
> >> > > > >> > >> > >> my linux system. Would you mind if I attached
the
> file
> >> > here?
> >> > > > >> > >> > >>
> >> > > > >> > >> > >> Mike
> >> > > > >> > >> > >>
> >> > > > >> > >> > >> On Thu, Apr 20, 2017 at 8:17 PM, John Halley
Gotway
> via
> >> > RT <
> >> > > > >> > >> > >> met_help at ucar.edu> wrote:
> >> > > > >> > >> > >>
> >> > > > >> > >> > >>> Mike,
> >> > > > >> > >> > >>>
> >> > > > >> > >> > >>> We just posted the first set of bugfixes for
met-6.0
> >> > here:
> >> > > > >> > >> > >>> http://www.dtcenter.org/met/us
> >> ers/support/known_issues/
> >> > > > >> > >> > METv6.0/index.php
> >> > > > >> > >> > >>>
> >> > > > >> > >> > >>> One of them changes those warnings to
debug(3) level
> >> > > messages
> >> > > > >> > >> instead.
> >> > > > >> > >> > >>>
> >> > > > >> > >> > >>> Basically, we realized the logic for when/how
to do
> >> GRIB
> >> > > > table
> >> > > > >> > >> lookups
> >> > > > >> > >> > >>> differs in the MET library code for GRIB1 and
GRIB2.
> >> We
> >> > > > >> > considered
> >> > > > >> > >> > using
> >> > > > >> > >> > >>> the patch to make it consistent, but decided
that
> that
> >> > was
> >> > > > too
> >> > > > >> big
> >> > > > >> > >> of a
> >> > > > >> > >> > >>> change and had the potential of introducing
more
> bugs.
> >> > > > >> Instead,
> >> > > > >> > >> we'll
> >> > > > >> > >> > >>> make
> >> > > > >> > >> > >>> it consistent in version 6.1. The easier
choice was
> >> just
> >> > > > >> > >> downgrading
> >> > > > >> > >> > >>> that
> >> > > > >> > >> > >>> warning.
> >> > > > >> > >> > >>>
> >> > > > >> > >> > >>> Ultimately though, the bigger concern is the
output
> of
> >> > > > >> > pcp_combine.
> >> > > > >> > >> > MET
> >> > > > >> > >> > >>> version 6.0 includes a major change from
NetCDF3 to
> >> > > NetCDF4.
> >> > > > >> But
> >> > > > >> > of
> >> > > > >> > >> > >>> course, the other MET tools should be able to
read
> it.
> >> > > > >> > >> > >>>
> >> > > > >> > >> > >>> You could post that output file to our
anonymous ftp
> >> site
> >> > > > and I
> >> > > > >> > >> could
> >> > > > >> > >> > >>> take
> >> > > > >> > >> > >>> a look:
> >> > > > >> > >> > >>> /usr1/wpc_cpgffh/gribs//temp/2016062300
> >> <(201)%20606-2300>
> >> > <(201)%20606-2300>
> >> > > > >> <(201)%20606-2300>
> >> > > > >> > >> > >>> _preacc_1_MTDdaily/ST4_lag00.nc
> >> > > > >> > >> > >>>
> >> > > > >> > >> > >>> Here's instructions for that:
> >> > > > >> > >> > >>> http://www.dtcenter.org/met/
> >> > users/support/met_help.php#ftp
> >> > > > >> > >> > >>>
> >> > > > >> > >> > >>> Thanks,
> >> > > > >> > >> > >>> John
> >> > > > >> > >> > >>>
> >> > > > >> > >> > >>>
> >> > > > >> > >> > >>>
> >> > > > >> > >> > >>> On Thu, Apr 20, 2017 at 2:10 PM, Michael
Erickson -
> >> NOAA
> >> > > > >> Affiliate
> >> > > > >> > >> via
> >> > > > >> > >> > >>> RT <
> >> > > > >> > >> > >>> met_help at ucar.edu> wrote:
> >> > > > >> > >> > >>>
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> > Thu Apr 20 14:10:51 2017: Request 80226 was
acted
> >> upon.
> >> > > > >> > >> > >>> > Transaction: Ticket created by
> >> > > michael.j.erickson at noaa.gov
> >> > > > >> > >> > >>> > Queue: met_help
> >> > > > >> > >> > >>> > Subject: Grib2 Table Issue at WPC
> >> > > > >> > >> > >>> > Owner: Nobody
> >> > > > >> > >> > >>> > Requestors: michael.j.erickson at noaa.gov
> >> > > > >> > >> > >>> > Status: new
> >> > > > >> > >> > >>> > Ticket <URL: https://rt.rap.ucar.edu/rt/
> >> > > > >> > >> > Ticket/Display.html?id=80226
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> > Good afternoon,
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> > I am testing the newest version of METv6.0
> >> installed by
> >> > > NCO
> >> > > > >> at
> >> > > > >> > WPC
> >> > > > >> > >> > >>> with the
> >> > > > >> > >> > >>> > aid of John Halley Gotway.
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> > I noticed some odd warnings when using
pcp_combine
> >> to
> >> > sum
> >> > > > >> > >> > >>> precipitation and
> >> > > > >> > >> > >>> > convert grib2 to netcdf. They are listed
below:
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> > */opt/MET6/met6.0/bin/pcp_combine -sum
> >> > 00000000_000000 1
> >> > > > >> > >> > >>> 20160623_010000
> >> > > > >> > >> > >>> > 01
> >> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> >> <(201)%20606-2300>
> >> > > <(201)%20606-2300>
> >> > > > >> > >> _preacc_1_MTDdaily/
> >> > > > >> > >> > ST4_lag00.nc
> >> > > > >> > >> > >>> > -pcpdir
/usr1/wpc_cpgffh/gribs//temp/2016062300
> >> <(201)%20606-2300>
> >> > > > >> > >> <(201)%20606-2300>_preacc_1_MTDdaily/WA
> >> > > > >> > >> > >>> RNING:
> >> > > > >> > >> > >>> > WARNING: Multiple GRIB2 table entries match
lookup
> >> > > criteria
> >> > > > >> > >> > (parm_name
> >> > > > >> > >> > >>> =
> >> > > > >> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a =
0,
> >> > > grib2_mtab =
> >> > > > >> 1,
> >> > > > >> > >> > >>> grib2_cntr =
> >> > > > >> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c =
> 8WARNING:
> >> > > > >> parm_name:
> >> > > > >> > >> > APCP,
> >> > > > >> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr =
57,
> >> > > grib2_ltab =
> >> > > > >> 0,
> >> > > > >> > >> > index_b
> >> > > > >> > >> > >>> = 1,
> >> > > > >> > >> > >>> > index_c = 8WARNING: parm_name: APCP,
index_a =
> 0,
> >> > > > >> grib2_mtab =
> >> > > > >> > >> 14,
> >> > > > >> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b =
1,
> >> index_c =
> >> > > > >> > 8WARNING:
> >> > > > >> > >> > >>> Using:
> >> > > > >> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab =
1,
> >> > grib2_cntr
> >> > > =
> >> > > > 0,
> >> > > > >> > >> > >>> grib2_ltab =
> >> > > > >> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG
1: [1]
> >> File
> >> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> >> <(201)%20606-2300>
> >> > > <(201)%20606-2300>
> >> > > > >> <(201)%20606-2300>
> >> > > > >> > >> > >>> _preacc_1_MTDdaily//
> >> > > > >> > >> > >>> > ST4.2016062301 <(201)%20606-2301>
> >> <(201)%20606-2301>
> >> > <(201)%20606-2301>.01h
> >> > > > >> > >> > >>> > matches valid time of 20160623_010000DEBUG
1: [1]
> >> > Reading
> >> > > > >> input
> >> > > > >> > >> file:
> >> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> >> <(201)%20606-2300>
> >> > > <(201)%20606-2300>
> >> > > > >> _preacc_1_MTDdaily//
> >> > > > >> > >> > >>> > ST4.2016062301 <(201)%20606-2301>
> >> <(201)%20606-2301>.01hWARNING:
> >> > > > >> > >> > >>> > WARNING: Multiple GRIB2 table entries match
lookup
> >> > > criteria
> >> > > > >> > >> > (parm_name
> >> > > > >> > >> > >>> =
> >> > > > >> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a =
0,
> >> > > grib2_mtab =
> >> > > > >> 1,
> >> > > > >> > >> > >>> grib2_cntr =
> >> > > > >> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c =
> 8WARNING:
> >> > > > >> parm_name:
> >> > > > >> > >> > APCP,
> >> > > > >> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr =
57,
> >> > > grib2_ltab =
> >> > > > >> 0,
> >> > > > >> > >> > index_b
> >> > > > >> > >> > >>> = 1,
> >> > > > >> > >> > >>> > index_c = 8WARNING: parm_name: APCP,
index_a =
> 0,
> >> > > > >> grib2_mtab =
> >> > > > >> > >> 14,
> >> > > > >> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b =
1,
> >> index_c =
> >> > > > >> > 8WARNING:
> >> > > > >> > >> > >>> Using:
> >> > > > >> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab =
1,
> >> > grib2_cntr
> >> > > =
> >> > > > 0,
> >> > > > >> > >> > >>> grib2_ltab =
> >> > > > >> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG
1:
> Writing
> >> > > output
> >> > > > >> > file:
> >> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> >> <(201)%20606-2300>
> >> > > <(201)%20606-2300>
> >> > > > >> > >> _preacc_1_MTDdaily/
> >> > > > >> > >> > ST4_lag00.nc
> >> > > > >> > >> > >>> *
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> > The resulting file, ST4_lag00.nc contains
data,
> but
> >> is
> >> > > not
> >> > > > >> > >> readable
> >> > > > >> > >> > >>> when
> >> > > > >> > >> > >>> > using the 'ncdump' command or when running
'mtd.'
> >> Note
> >> > > that
> >> > > > >> the
> >> > > > >> > >> same
> >> > > > >> > >> > >>> > commands work when using METv5.1. This
appears to
> >> be an
> >> > > > issue
> >> > > > >> > with
> >> > > > >> > >> > the
> >> > > > >> > >> > >>> > grib2 tables, but I wanted to be sure.
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> > Thank you for your help.
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> > Mike
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> > --
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> > Michael J. Erickson, Ph.D
> >> > > > >> > >> > >>> > Cooperative Institute for Research in
> Environmental
> >> > > > Sciences
> >> > > > >> > >> (CIRES)
> >> > > > >> > >> > >>> > CIRES Contractor for the Weather Prediction
Center
> >> > (WPC)
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> > Phone: 301-683-1546 <(301)%20683-1546>
> >> <(301)%20683-1546>
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>> >
> >> > > > >> > >> > >>>
> >> > > > >> > >> > >>>
> >> > > > >> > >> > >>
> >> > > > >> > >> > >>
> >> > > > >> > >> > >> --
> >> > > > >> > >> > >>
> >> > > > >> > >> > >> Michael J. Erickson, Ph.D
> >> > > > >> > >> > >> Cooperative Institute for Research in
Environmental
> >> > Sciences
> >> > > > >> > (CIRES)
> >> > > > >> > >> > >> CIRES Contractor for the Weather Prediction
Center
> >> (WPC)
> >> > > > >> > >> > >>
> >> > > > >> > >> > >> Phone: 301-683-1546 <(301)%20683-1546>
> >> <(301)%20683-1546>
> >> > > > >> > >> > >>
> >> > > > >> > >> > >>
> >> > > > >> > >> > >
> >> > > > >> > >> > >
> >> > > > >> > >> > > --
> >> > > > >> > >> > >
> >> > > > >> > >> > > Michael J. Erickson, Ph.D
> >> > > > >> > >> > > Cooperative Institute for Research in
Environmental
> >> > Sciences
> >> > > > >> (CIRES)
> >> > > > >> > >> > > CIRES Contractor for the Weather Prediction
Center
> (WPC)
> >> > > > >> > >> > >
> >> > > > >> > >> > > Phone: 301-683-1546 <(301)%20683-1546>
> >> <(301)%20683-1546>
> >> > > > >> > >> > >
> >> > > > >> > >> > >
> >> > > > >> > >> >
> >> > > > >> > >> >
> >> > > > >> > >> > --
> >> > > > >> > >> >
> >> > > > >> > >> > Michael J. Erickson, Ph.D
> >> > > > >> > >> > Cooperative Institute for Research in
Environmental
> >> Sciences
> >> > > > >> (CIRES)
> >> > > > >> > >> > CIRES Contractor for the Weather Prediction
Center (WPC)
> >> > > > >> > >> >
> >> > > > >> > >> > Phone: 301-683-1546 <(301)%20683-1546>
> >> > > > >> > >> >
> >> > > > >> > >> >
> >> > > > >> > >>
> >> > > > >> > >>
> >> > > > >> > >
> >> > > > >> > >
> >> > > > >> > > --
> >> > > > >> > >
> >> > > > >> > > Michael J. Erickson, Ph.D
> >> > > > >> > > Cooperative Institute for Research in Environmental
> Sciences
> >> > > (CIRES)
> >> > > > >> > > CIRES Contractor for the Weather Prediction Center
(WPC)
> >> > > > >> > >
> >> > > > >> > > Phone: 301-683-1546 <(301)%20683-1546>
<(301)%20683-1546>
> >> > > > >> > >
> >> > > > >> > >
> >> > > > >> >
> >> > > > >> >
> >> > > > >> > --
> >> > > > >> >
> >> > > > >> > Michael J. Erickson, Ph.D
> >> > > > >> > Cooperative Institute for Research in Environmental
Sciences
> >> > (CIRES)
> >> > > > >> > CIRES Contractor for the Weather Prediction Center
(WPC)
> >> > > > >> >
> >> > > > >> > Phone: 301-683-1546 <(301)%20683-1546>
> >> > > > >> >
> >> > > > >> >
> >> > > > >>
> >> > > > >>
> >> > > > >
> >> > > > >
> >> > > > > --
> >> > > > >
> >> > > > > Michael J. Erickson, Ph.D
> >> > > > > Cooperative Institute for Research in Environmental
Sciences
> >> (CIRES)
> >> > > > > CIRES Contractor for the Weather Prediction Center (WPC)
> >> > > > >
> >> > > > > Phone: 301-683-1546 <(301)%20683-1546> <(301)%20683-
1546>
> >> > > > >
> >> > > > >
> >> > > >
> >> > > >
> >> > > > --
> >> > > >
> >> > > > Michael J. Erickson, Ph.D
> >> > > > Cooperative Institute for Research in Environmental
Sciences
> (CIRES)
> >> > > > CIRES Contractor for the Weather Prediction Center (WPC)
> >> > > >
> >> > > > Phone: 301-683-1546 <(301)%20683-1546>
> >> > > >
> >> > > >
> >> > >
> >> > >
> >> >
> >> >
> >> > --
> >> >
> >> > Michael J. Erickson, Ph.D
> >> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> >> > CIRES Contractor for the Weather Prediction Center (WPC)
> >> >
> >> > Phone: 301-683-1546 <(301)%20683-1546>
> >> >
> >> >
> >>
> >>
> >
> >
> > --
> >
> > Michael J. Erickson, Ph.D
> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > CIRES Contractor for the Weather Prediction Center (WPC)
> >
> > Phone: 301-683-1546 <(301)%20683-1546>
> >
> >
>
>
> --
>
> Michael J. Erickson, Ph.D
> Cooperative Institute for Research in Environmental Sciences (CIRES)
> CIRES Contractor for the Weather Prediction Center (WPC)
>
> Phone: 301-683-1546
>
>
------------------------------------------------
Subject: Grib2 Table Issue at WPC
From: Michael Erickson - NOAA Affiliate
Time: Tue Apr 25 07:26:32 2017
Hi John,
Thanks and that sounds great!
I may not be able to get you inside the building personally, since I'm
a
contractor, but I can find someone.
What time works for you? I can do lunch break any day and after 4:30
Wednesday or Thursday.
Mike
On Tue, Apr 25, 2017 at 1:23 PM, John Halley Gotway via RT <
met_help at ucar.edu> wrote:
> Mike,
>
> I'm at NCWCP for the MET tutorial this week. Perhaps I could just
come up
> to your office during a break or after we're done for the day, and
we could
> debug? But I'd need a NOAA escort.
>
> Thanks,
> John
>
>
> On Tue, Apr 25, 2017 at 8:51 AM, Michael Erickson - NOAA Affiliate
via RT <
> met_help at ucar.edu> wrote:
>
> >
> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> >
> > Hi John,
> >
> > I am still unable to resolve the HDF problem I emailed you
yesterday.
> Note
> > that on our netapp there are two versions of MET, METv5.1 at
/opt/MET and
> > METv6.0 at /opt/MET6. I noticed that the libnetcdf instructions,
located
> at
> > /opt/MET6/external_libs/lib/libhdf5.settings references the old
version
> of
> > MET located at /opt/MET/. Is this a potential problem?
> >
> > Thanks,
> >
> > Mike
> >
> > On Mon, Apr 24, 2017 at 12:49 PM, Michael Erickson - NOAA
Affiliate <
> > michael.j.erickson at noaa.gov> wrote:
> >
> > > Hey John,
> > >
> > > No worries and thanks! pcp_combine works again. Below is my
> > LD_LIBRARY_PATH
> > >
> > >
> > > *echo
> > > $LD_LIBRARY_PATH/lib:/export-5/ncosrvnfs-cp/nawips2/os/
> > linux2.6.32_x86_64/lib:/opt/MET6/external_libs/lib:/usr/
> >
lib:/usr/lib64:/opt/MET6/external_libs:/opt/MET6/external_libs/lib*
> > >
> > > Unfortunately, our original problem remains. I use pcp_combine,
> > > regrid_data_plane and then mode. Below is my error output from
mode:
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > > */opt/MET6/met6.0/bin/mode
/usr1/wpc_cpgffh/gribs//temp/2016062300
> > > <(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc
> > > /usr1/wpc_cpgffh/gribs//temp/2016062300
> > > <(201)%20606-2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc
> > > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> > USE_SAMP_f24_p6_t0.5
> > > -outdir /usr1/wpc_cpgffh/gribs//temp/2016062300
> > > <(201)%20606-2300>_preacc_6_MODEdailyDEBUG 1: Default Config
File:
> > > /opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG 1:
Match
> > Config
> > > File:
> > > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> > USE_SAMP_f24_p6_t0.5DEBUG
> > > 1: Merge Config File:
> > > /export/hpc-lw-dtbdev5/merickson/METv6.0//MODEConfig_
> > USE_SAMP_f24_p6_t0.5DEBUG
> > > 1: Forecast File: /usr1/wpc_cpgffh/gribs//temp/2016062300
> > > <(201)%20606-
2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.ncDEBUG 1:
> > > Observation File: /usr1/wpc_cpgffh/gribs//temp/2016062300
> > > <(201)%20606-
2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.ncERROR :
> > ERROR
> > > : setup_fcst_obs_data() -> can't get data from file
> > > "/usr1/wpc_cpgffh/gribs//temp/2016062300
> > > <(201)%20606-
2300>_preacc_6_MODEdaily/HRRRv3_TLE_lag06_f6.nc"ERROR :
> > > HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread 0:
#000:
> H5T.c
> > > line 1723 in H5Tclose(): not a datatype major: Invalid
arguments to
> > > routine minor: Inappropriate typeNetCDF: HDF errorfile:
ncFile.cpp
> > > line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1) thread
0:
> #000:
> > > H5T.c line 1723 in H5Tclose(): not a datatype major: Invalid
> arguments
> > > to routine minor: Inappropriate typeNetCDF: HDF errorfile:
> ncFile.cpp
> > > line:33*
> > >
> > > Thanks!
> > >
> > > Mike
> > >
> > > On Fri, Apr 21, 2017 at 5:26 PM, John Halley Gotway via RT <
> > > met_help at ucar.edu> wrote:
> > >
> > >> Mike,
> > >>
> > >> I see that I sent you the wrong command last time, sorry!
> > >>
> > >> setenv LD_LIBRARY_PATH
/opt/MET6/external_libs/lib:${LD_LIBRARY_PATH}
> > >>
> > >> Please check to see if this file exists:
> > >> ls /opt/MET6/external_libs/lib/libnetcdf_c++4.so.1
> > >>
> > >> Hopefully it does, and the setting I listed above will work.
> > >>
> > >> John
> > >>
> > >> On Fri, Apr 21, 2017 at 2:48 PM, Michael Erickson - NOAA
Affiliate via
> > RT
> > >> <
> > >> met_help at ucar.edu> wrote:
> > >>
> > >> >
> > >> > <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226
>
> > >> >
> > >> > Thanks John,
> > >> >
> > >> > I've removed all other instances of LD_LIBRARY_PATH other
than the
> one
> > >> you
> > >> > specified. I get:
> > >> >
> > >> > */opt/MET6/met6.0/bin/pcp_combine: error while loading shared
> > >> libraries:
> > >> > libnetcdf_c++4.so.1: cannot open shared object file: No such
file or
> > >> > directory*
> > >> >
> > >> > This error has been encountered occasionally. Should I try
linking
> to
> > a
> > >> > netcdf library on my local machine?
> > >> >
> > >> > Mike
> > >> >
> > >> > On Fri, Apr 21, 2017 at 8:38 PM, John Halley Gotway via RT <
> > >> > met_help at ucar.edu> wrote:
> > >> >
> > >> > > Mike,
> > >> > >
> > >> > > If you haven't already, please try putting that in the
first
> > position:
> > >> > > setenv LD_LIBRARY_PATH
/opt/MET6/external_libs:${LD_LIBRARY_PATH}
> > >> > >
> > >> > > The linker searches those paths in order. Does that change
> > anything?
> > >> > >
> > >> > > Thanks,
> > >> > > John
> > >> > >
> > >> > > On Fri, Apr 21, 2017 at 2:28 PM, Michael Erickson - NOAA
Affiliate
> > via
> > >> > RT <
> > >> > > met_help at ucar.edu> wrote:
> > >> > >
> > >> > > >
> > >> > > > <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=80226 >
> > >> > > >
> > >> > > > I believe the directory you're referring to is:
> > >> > > > /opt/MET6/external_libs/bin/. I've added that to
> LD_LIBRARY_PATH,
> > >> but
> > >> > it
> > >> > > > still errors.
> > >> > > >
> > >> > > > Mike
> > >> > > >
> > >> > > > On Fri, Apr 21, 2017 at 8:12 PM, Michael Erickson - NOAA
> > Affiliate <
> > >> > > > michael.j.erickson at noaa.gov> wrote:
> > >> > > >
> > >> > > > > Thanks John,
> > >> > > > >
> > >> > > > > To answer your first question:
> > >> > > > >
> > >> > > > >
> > >> > > > >
> > >> > > > >
> > >> > > > > *echo
> > >> > > > > $LD_LIBRARY_PATH/lib:/export-5/ncosrvnfs-cp/nawips2/os/
> > >> > > > linux2.6.32_x86_64/lib:/usr/lib:/usr/lib64:/opt/MET6/
> > >> > > > external_libs:/opt/MET6/external_libs/lib:/usr/lib64/
> > openmpi/lib/*
> > >> > > > > To answer your second:
> > >> > > > >
> > >> > > > >
> > >> > > > >
> > >> > > > >
> > >> > > > > *grep MET_NETCDF /opt/MET6/met6.0/config.loggrep:
> > >> > > > > /opt/MET6/met6.0/config.log: No such file or directory*
> > >> > > > > However, MET_NETCDF is set to /opt/MET6/external_libs
> > >> > > > >
> > >> > > > > Hope that helps,
> > >> > > > >
> > >> > > > > Mike
> > >> > > > >
> > >> > > > > On Fri, Apr 21, 2017 at 6:23 PM, John Halley Gotway via
RT <
> > >> > > > > met_help at ucar.edu> wrote:
> > >> > > > >
> > >> > > > >> Mike,
> > >> > > > >>
> > >> > > > >> This looks to me like an issue with the environment.
I think
> > >> these
> > >> > > sort
> > >> > > > >> of
> > >> > > > >> issues are inevitable as we switch from using NetCDF3
to
> > NetCDF4.
> > >> > > > NetCDF4
> > >> > > > >> is built upon HDF5, so generally, you can interpret
HDF5
> errors
> > >> as
> > >> > > being
> > >> > > > >> problems with NetCDF.
> > >> > > > >>
> > >> > > > >> On theia, wcoss, and HPC machines as NCAR, we've begun
using
> > >> > > modulefiles
> > >> > > > >> (i.e. module load met/6.0) and those files set up the
> > >> environment in
> > >> > > the
> > >> > > > >> required way. But lacking that, we should just check
how you
> > >> have
> > >> > > > >> LD_LIBRARY_PATH set:
> > >> > > > >>
> > >> > > > >> echo $LD_LIBRARY_PATH
> > >> > > > >>
> > >> > > > >> That environment variables needs to include the
directories
> > >> > containing
> > >> > > > the
> > >> > > > >> NetCDF and HDF5 libraries (usually, I've seen them
placed
> into
> > >> the
> > >> > > same
> > >> > > > >> directory).
> > >> > > > >>
> > >> > > > >> Try running:
> > >> > > > >> grep MET_NETCDF /opt/MET6/met6.0/config.log
> > >> > > > >>
> > >> > > > >> Hopefully, that'll tell us where the NetCDF library
used to
> > >> compile
> > >> > > MET
> > >> > > > >> actually lives on your system.
> > >> > > > >>
> > >> > > > >> Thanks,
> > >> > > > >> John
> > >> > > > >>
> > >> > > > >>
> > >> > > > >>
> > >> > > > >> On Fri, Apr 21, 2017 at 12:15 PM, Michael Erickson -
NOAA
> > >> Affiliate
> > >> > > via
> > >> > > > >> RT <
> > >> > > > >> met_help at ucar.edu> wrote:
> > >> > > > >>
> > >> > > > >> >
> > >> > > > >> > <URL: https://rt.rap.ucar.edu/rt/
> > Ticket/Display.html?id=80226
> > >> >
> > >> > > > >> >
> > >> > > > >> > Hi All,
> > >> > > > >> >
> > >> > > > >> > I tried doing a similar thing with MODE. Similar to
MTD,
> > >> > pcp_combine
> > >> > > > and
> > >> > > > >> > regrid_data_plan are run first. The error is below:
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> > */opt/MET6/met6.0/bin/mode
> > >> > > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300_
> > >> > > > preacc_6_MODEdaily/HRRRv3_TLE_
> > >> > > > >> > lag06_f6.nc
> > >> > > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300_
> preacc_6_MODEdaily/
> > >> > > > >> > HRRRv3_TLE_lag06_f6.nc
> > >> > > > >> > /export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_USE_
> > >> > > > >> SAMP_f24_p6_t0.5
> > >> > > > >> > -outdir /usr1/wpc_cpgffh/gribs//temp/2016062300
> > >> <(201)%20606-2300>
> > >> > <(201)%20606-2300>
> > >> > > > >> _preacc_6_MODEdailyDEBUG 1:
> > >> > > > >> > Default Config File:
> > >> > > > >> >
/opt/MET6/met6.0/share/met/config/MODEConfig_defaultDEBUG
> 1:
> > >> > Match
> > >> > > > >> Config
> > >> > > > >> > File:
> > >> > > > >> > /export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_
> > >> > > > >> > USE_SAMP_f24_p6_t0.5DEBUG
> > >> > > > >> > 1: Merge Config File:
> > >> > > > >> > /export/hpc-lw-
dtbdev5/merickson/METv6.0//MODEConfig_
> > >> > > > >> > USE_SAMP_f24_p6_t0.5DEBUG
> > >> > > > >> > 1: Forecast File:
> > >> > > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300
<(201)%20606-2300>
> > >> <(201)%20606-2300>
> > >> > > > >> _preacc_6_MODEdaily/
> > >> > > > >> > HRRRv3_TLE_lag06_f6.ncDEBUG
> > >> > > > >> > 1: Observation File:
> > >> > > > >> > /usr1/wpc_cpgffh/gribs//temp/2016062300
<(201)%20606-2300>
> > >> <(201)%20606-2300>
> > >> > > > >> _preacc_6_MODEdaily/
> > >> > > > >> > HRRRv3_TLE_lag06_f6.ncERROR
> > >> > > > >> > : ERROR : setup_fcst_obs_data() -> can't get data
from
> file
> > >> > > > >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300
> <(201)%20606-2300>
> > >> _preacc_6_MODEdaily/
> > >> > > > >> > HRRRv3_TLE_lag06_f6.nc"ERROR
> > >> > > > >> > : HDF5-DIAG: Error detected in HDF5 (1.10.0-patch1)
thread
> 0:
> > >> > #000:
> > >> > > > >> H5T.c
> > >> > > > >> > line 1723 in H5Tclose(): not a datatype major:
Invalid
> > >> > arguments
> > >> > > to
> > >> > > > >> > routine minor: Inappropriate typeNetCDF: HDF
errorfile:
> > >> > > ncFile.cpp
> > >> > > > >> > line:33HDF5-DIAG: Error detected in HDF5 (1.10.0-
patch1)
> > >> thread 0:
> > >> > > > >> #000:
> > >> > > > >> > H5T.c line 1723 in H5Tclose(): not a datatype
major:
> > Invalid
> > >> > > > >> arguments
> > >> > > > >> > to routine minor: Inappropriate typeNetCDF: HDF
> errorfile:
> > >> > > > ncFile.cpp
> > >> > > > >> > line:33*
> > >> > > > >> > Looks to be HDF related. Thanks!
> > >> > > > >> >
> > >> > > > >> > Mike
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> > On Fri, Apr 21, 2017 at 1:58 PM, Michael Erickson -
NOAA
> > >> > Affiliate <
> > >> > > > >> > michael.j.erickson at noaa.gov> wrote:
> > >> > > > >> >
> > >> > > > >> > > Thanks Tara!
> > >> > > > >> > >
> > >> > > > >> > > On Fri, Apr 21, 2017 at 1:45 PM, Tara Jensen via
RT <
> > >> > > > >> met_help at ucar.edu>
> > >> > > > >> > > wrote:
> > >> > > > >> > >
> > >> > > > >> > >> John, I'll grab the data in a little bit and put
it on
> > >> dakota.
> > >> > > > >> > >>
> > >> > > > >> > >> Cheers, Tara
> > >> > > > >> > >>
> > >> > > > >> > >> On Apr 21, 2017 7:22 AM, "Michael Erickson - NOAA
> > Affiliate
> > >> via
> > >> > > > RT" <
> > >> > > > >> > >> met_help at ucar.edu> wrote:
> > >> > > > >> > >>
> > >> > > > >> > >> >
> > >> > > > >> > >> > <URL: https://rt.rap.ucar.edu/rt/
> > >> > Ticket/Display.html?id=80226
> > >> > > >
> > >> > > > >> > >> >
> > >> > > > >> > >> > Hi John,
> > >> > > > >> > >> >
> > >> > > > >> > >> > To explain my problem better...my code is able
to run
> > >> METv5.1
> > >> > > but
> > >> > > > >> not
> > >> > > > >> > >> > METv6.0. The exe files used are 'pcp_combine',
> > >> > > > 'regrid_data_plane'
> > >> > > > >> and
> > >> > > > >> > >> then
> > >> > > > >> > >> > 'mtd,' In METv6.0 'pcp_combine' converts grib2
to
> > netcdf,
> > >> but
> > >> > > > with
> > >> > > > >> the
> > >> > > > >> > >> > warnings mentioned earlier and with netcdf
files that
> > are
> > >> not
> > >> > > > >> readable
> > >> > > > >> > >> by
> > >> > > > >> > >> > ncdump. 'regrid_data_plane' also works, but
'mtd' does
> > >> not.
> > >> > The
> > >> > > > >> error
> > >> > > > >> > >> with
> > >> > > > >> > >> > 'mtd' is shown below, but I've found this mtd
error
> > output
> > >> > > occurs
> > >> > > > >> even
> > >> > > > >> > >> if
> > >> > > > >> > >> > the issue is something else. In this case, I
believe
> mtd
> > >> is
> > >> > > > unable
> > >> > > > >> to
> > >> > > > >> > >> read
> > >> > > > >> > >> > the netcdf file.
> > >> > > > >> > >> >
> > >> > > > >> > >> > Unfortunately I don't have access to theia. I'm
not
> sure
> > >> how
> > >> > I
> > >> > > > can
> > >> > > > >> > give
> > >> > > > >> > >> you
> > >> > > > >> > >> > the files. I do not have ftp, the sftp command
fails,
> > and
> > >> the
> > >> > > scp
> > >> > > > >> > >> command
> > >> > > > >> > >> > may work but I can not create my own folder on
your
> > >> server a
> > >> > > > >> priori. I
> > >> > > > >> > >> > shared some data with Tara over google drive
through
> her
> > >> noaa
> > >> > > > >> account.
> > >> > > > >> > >> It
> > >> > > > >> > >> > contains forecast hours 1-6 of a sample "model"
and
> > >> > > "observation"
> > >> > > > >> > >> created
> > >> > > > >> > >> > using METv6.0. This is after 'pcp_combine' and
> > >> > > > 'regrid_data_plane'
> > >> > > > >> > were
> > >> > > > >> > >> > run, but before 'mtd.'
> > >> > > > >> > >> >
> > >> > > > >> > >> > Thanks for your help and sorry for the round
about way
> > of
> > >> > > sharing
> > >> > > > >> > data.
> > >> > > > >> > >> >
> > >> > > > >> > >> >
> > >> > > > >> > >> >
> > >> > > > >> > >> >
> > >> > > > >> > >> >
> > >> > > > >> > >> >
> > >> > > > >> > >> > *DEBUG 2: mtd_read_data() -> processing file
> > >> > > > >> > >> > "/usr1/wpc_cpgffh/gribs//temp/2016062300
> > >> <(201)%20606-2300> <(201)%20606-2300>
> > >> > > > >> _preacc_1_MTDdaily/
> > >> > > > >> > >> > HRRRv3_TLE_lag06_f1.nc"ERROR
> > >> > > > >> > >> > : ERROR : ERROR : mtd_read_data() -> unable
to get
> > >> data
> > >> > > plane
> > >> > > > >> at
> > >> > > > >> > >> time
> > >> > > > >> > >> > 0ERROR : *
> > >> > > > >> > >> >
> > >> > > > >> > >> > Mike
> > >> > > > >> > >> >
> > >> > > > >> > >> > On Fri, Apr 21, 2017 at 12:06 PM, Michael
Erickson -
> > NOAA
> > >> > > > >> Affiliate <
> > >> > > > >> > >> > michael.j.erickson at noaa.gov> wrote:
> > >> > > > >> > >> >
> > >> > > > >> > >> > > Hi John,
> > >> > > > >> > >> > >
> > >> > > > >> > >> > > Lets see if this works.
> > >> > > > >> > >> > >
> > >> > > > >> > >> > > Mike
> > >> > > > >> > >> > >
> > >> > > > >> > >> > > On Thu, Apr 20, 2017 at 8:31 PM, Michael
Erickson -
> > NOAA
> > >> > > > >> Affiliate <
> > >> > > > >> > >> > > michael.j.erickson at noaa.gov> wrote:
> > >> > > > >> > >> > >
> > >> > > > >> > >> > >> Hi John,
> > >> > > > >> > >> > >>
> > >> > > > >> > >> > >> Thank you for your helpful response.
> Unfortunately, I
> > >> do
> > >> > not
> > >> > > > >> have
> > >> > > > >> > >> ftp on
> > >> > > > >> > >> > >> my linux system. Would you mind if I
attached the
> > file
> > >> > here?
> > >> > > > >> > >> > >>
> > >> > > > >> > >> > >> Mike
> > >> > > > >> > >> > >>
> > >> > > > >> > >> > >> On Thu, Apr 20, 2017 at 8:17 PM, John Halley
Gotway
> > via
> > >> > RT <
> > >> > > > >> > >> > >> met_help at ucar.edu> wrote:
> > >> > > > >> > >> > >>
> > >> > > > >> > >> > >>> Mike,
> > >> > > > >> > >> > >>>
> > >> > > > >> > >> > >>> We just posted the first set of bugfixes
for
> met-6.0
> > >> > here:
> > >> > > > >> > >> > >>> http://www.dtcenter.org/met/us
> > >> ers/support/known_issues/
> > >> > > > >> > >> > METv6.0/index.php
> > >> > > > >> > >> > >>>
> > >> > > > >> > >> > >>> One of them changes those warnings to
debug(3)
> level
> > >> > > messages
> > >> > > > >> > >> instead.
> > >> > > > >> > >> > >>>
> > >> > > > >> > >> > >>> Basically, we realized the logic for
when/how to
> do
> > >> GRIB
> > >> > > > table
> > >> > > > >> > >> lookups
> > >> > > > >> > >> > >>> differs in the MET library code for GRIB1
and
> GRIB2.
> > >> We
> > >> > > > >> > considered
> > >> > > > >> > >> > using
> > >> > > > >> > >> > >>> the patch to make it consistent, but
decided that
> > that
> > >> > was
> > >> > > > too
> > >> > > > >> big
> > >> > > > >> > >> of a
> > >> > > > >> > >> > >>> change and had the potential of introducing
more
> > bugs.
> > >> > > > >> Instead,
> > >> > > > >> > >> we'll
> > >> > > > >> > >> > >>> make
> > >> > > > >> > >> > >>> it consistent in version 6.1. The easier
choice
> was
> > >> just
> > >> > > > >> > >> downgrading
> > >> > > > >> > >> > >>> that
> > >> > > > >> > >> > >>> warning.
> > >> > > > >> > >> > >>>
> > >> > > > >> > >> > >>> Ultimately though, the bigger concern is
the
> output
> > of
> > >> > > > >> > pcp_combine.
> > >> > > > >> > >> > MET
> > >> > > > >> > >> > >>> version 6.0 includes a major change from
NetCDF3
> to
> > >> > > NetCDF4.
> > >> > > > >> But
> > >> > > > >> > of
> > >> > > > >> > >> > >>> course, the other MET tools should be able
to read
> > it.
> > >> > > > >> > >> > >>>
> > >> > > > >> > >> > >>> You could post that output file to our
anonymous
> ftp
> > >> site
> > >> > > > and I
> > >> > > > >> > >> could
> > >> > > > >> > >> > >>> take
> > >> > > > >> > >> > >>> a look:
> > >> > > > >> > >> > >>> /usr1/wpc_cpgffh/gribs//temp/2016062300
> > >> <(201)%20606-2300>
> > >> > <(201)%20606-2300>
> > >> > > > >> <(201)%20606-2300>
> > >> > > > >> > >> > >>> _preacc_1_MTDdaily/ST4_lag00.nc
> > >> > > > >> > >> > >>>
> > >> > > > >> > >> > >>> Here's instructions for that:
> > >> > > > >> > >> > >>> http://www.dtcenter.org/met/
> > >> > users/support/met_help.php#ftp
> > >> > > > >> > >> > >>>
> > >> > > > >> > >> > >>> Thanks,
> > >> > > > >> > >> > >>> John
> > >> > > > >> > >> > >>>
> > >> > > > >> > >> > >>>
> > >> > > > >> > >> > >>>
> > >> > > > >> > >> > >>> On Thu, Apr 20, 2017 at 2:10 PM, Michael
Erickson
> -
> > >> NOAA
> > >> > > > >> Affiliate
> > >> > > > >> > >> via
> > >> > > > >> > >> > >>> RT <
> > >> > > > >> > >> > >>> met_help at ucar.edu> wrote:
> > >> > > > >> > >> > >>>
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> > Thu Apr 20 14:10:51 2017: Request 80226
was
> acted
> > >> upon.
> > >> > > > >> > >> > >>> > Transaction: Ticket created by
> > >> > > michael.j.erickson at noaa.gov
> > >> > > > >> > >> > >>> > Queue: met_help
> > >> > > > >> > >> > >>> > Subject: Grib2 Table Issue at WPC
> > >> > > > >> > >> > >>> > Owner: Nobody
> > >> > > > >> > >> > >>> > Requestors: michael.j.erickson at noaa.gov
> > >> > > > >> > >> > >>> > Status: new
> > >> > > > >> > >> > >>> > Ticket <URL: https://rt.rap.ucar.edu/rt/
> > >> > > > >> > >> > Ticket/Display.html?id=80226
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> > Good afternoon,
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> > I am testing the newest version of
METv6.0
> > >> installed by
> > >> > > NCO
> > >> > > > >> at
> > >> > > > >> > WPC
> > >> > > > >> > >> > >>> with the
> > >> > > > >> > >> > >>> > aid of John Halley Gotway.
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> > I noticed some odd warnings when using
> pcp_combine
> > >> to
> > >> > sum
> > >> > > > >> > >> > >>> precipitation and
> > >> > > > >> > >> > >>> > convert grib2 to netcdf. They are listed
below:
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> > */opt/MET6/met6.0/bin/pcp_combine -sum
> > >> > 00000000_000000 1
> > >> > > > >> > >> > >>> 20160623_010000
> > >> > > > >> > >> > >>> > 01
> > >> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> > >> <(201)%20606-2300>
> > >> > > <(201)%20606-2300>
> > >> > > > >> > >> _preacc_1_MTDdaily/
> > >> > > > >> > >> > ST4_lag00.nc
> > >> > > > >> > >> > >>> > -pcpdir
/usr1/wpc_cpgffh/gribs//temp/2016062300
> > >> <(201)%20606-2300>
> > >> > > > >> > >> <(201)%20606-2300>_preacc_1_MTDdaily/WA
> > >> > > > >> > >> > >>> RNING:
> > >> > > > >> > >> > >>> > WARNING: Multiple GRIB2 table entries
match
> lookup
> > >> > > criteria
> > >> > > > >> > >> > (parm_name
> > >> > > > >> > >> > >>> =
> > >> > > > >> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a
= 0,
> > >> > > grib2_mtab =
> > >> > > > >> 1,
> > >> > > > >> > >> > >>> grib2_cntr =
> > >> > > > >> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c =
> > 8WARNING:
> > >> > > > >> parm_name:
> > >> > > > >> > >> > APCP,
> > >> > > > >> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr
= 57,
> > >> > > grib2_ltab =
> > >> > > > >> 0,
> > >> > > > >> > >> > index_b
> > >> > > > >> > >> > >>> = 1,
> > >> > > > >> > >> > >>> > index_c = 8WARNING: parm_name: APCP,
index_a =
> > 0,
> > >> > > > >> grib2_mtab =
> > >> > > > >> > >> 14,
> > >> > > > >> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b
= 1,
> > >> index_c =
> > >> > > > >> > 8WARNING:
> > >> > > > >> > >> > >>> Using:
> > >> > > > >> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab
= 1,
> > >> > grib2_cntr
> > >> > > =
> > >> > > > 0,
> > >> > > > >> > >> > >>> grib2_ltab =
> > >> > > > >> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG
1: [1]
> > >> File
> > >> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> > >> <(201)%20606-2300>
> > >> > > <(201)%20606-2300>
> > >> > > > >> <(201)%20606-2300>
> > >> > > > >> > >> > >>> _preacc_1_MTDdaily//
> > >> > > > >> > >> > >>> > ST4.2016062301 <(201)%20606-2301>
> > >> <(201)%20606-2301>
> > >> > <(201)%20606-2301>.01h
> > >> > > > >> > >> > >>> > matches valid time of
20160623_010000DEBUG 1:
> [1]
> > >> > Reading
> > >> > > > >> input
> > >> > > > >> > >> file:
> > >> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> > >> <(201)%20606-2300>
> > >> > > <(201)%20606-2300>
> > >> > > > >> _preacc_1_MTDdaily//
> > >> > > > >> > >> > >>> > ST4.2016062301 <(201)%20606-2301>
> > >> <(201)%20606-2301>.01hWARNING:
> > >> > > > >> > >> > >>> > WARNING: Multiple GRIB2 table entries
match
> lookup
> > >> > > criteria
> > >> > > > >> > >> > (parm_name
> > >> > > > >> > >> > >>> =
> > >> > > > >> > >> > >>> > APCP):WARNING: parm_name: APCP, index_a
= 0,
> > >> > > grib2_mtab =
> > >> > > > >> 1,
> > >> > > > >> > >> > >>> grib2_cntr =
> > >> > > > >> > >> > >>> > 0, grib2_ltab = 0, index_b = 1, index_c =
> > 8WARNING:
> > >> > > > >> parm_name:
> > >> > > > >> > >> > APCP,
> > >> > > > >> > >> > >>> > index_a = 0, grib2_mtab = 14, grib2_cntr
= 57,
> > >> > > grib2_ltab =
> > >> > > > >> 0,
> > >> > > > >> > >> > index_b
> > >> > > > >> > >> > >>> = 1,
> > >> > > > >> > >> > >>> > index_c = 8WARNING: parm_name: APCP,
index_a =
> > 0,
> > >> > > > >> grib2_mtab =
> > >> > > > >> > >> 14,
> > >> > > > >> > >> > >>> > grib2_cntr = 57, grib2_ltab = 0, index_b
= 1,
> > >> index_c =
> > >> > > > >> > 8WARNING:
> > >> > > > >> > >> > >>> Using:
> > >> > > > >> > >> > >>> > parm_name: APCP, index_a = 0, grib2_mtab
= 1,
> > >> > grib2_cntr
> > >> > > =
> > >> > > > 0,
> > >> > > > >> > >> > >>> grib2_ltab =
> > >> > > > >> > >> > >>> > 0, index_b = 1, index_c = 8WARNING: DEBUG
1:
> > Writing
> > >> > > output
> > >> > > > >> > file:
> > >> > > > >> > >> > >>> > /usr1/wpc_cpgffh/gribs//temp/2016062300
> > >> <(201)%20606-2300>
> > >> > > <(201)%20606-2300>
> > >> > > > >> > >> _preacc_1_MTDdaily/
> > >> > > > >> > >> > ST4_lag00.nc
> > >> > > > >> > >> > >>> *
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> > The resulting file, ST4_lag00.nc contains
data,
> > but
> > >> is
> > >> > > not
> > >> > > > >> > >> readable
> > >> > > > >> > >> > >>> when
> > >> > > > >> > >> > >>> > using the 'ncdump' command or when
running
> 'mtd.'
> > >> Note
> > >> > > that
> > >> > > > >> the
> > >> > > > >> > >> same
> > >> > > > >> > >> > >>> > commands work when using METv5.1. This
appears
> to
> > >> be an
> > >> > > > issue
> > >> > > > >> > with
> > >> > > > >> > >> > the
> > >> > > > >> > >> > >>> > grib2 tables, but I wanted to be sure.
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> > Thank you for your help.
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> > Mike
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> > --
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> > Michael J. Erickson, Ph.D
> > >> > > > >> > >> > >>> > Cooperative Institute for Research in
> > Environmental
> > >> > > > Sciences
> > >> > > > >> > >> (CIRES)
> > >> > > > >> > >> > >>> > CIRES Contractor for the Weather
Prediction
> Center
> > >> > (WPC)
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> > Phone: 301-683-1546 <(301)%20683-1546>
> > >> <(301)%20683-1546>
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>> >
> > >> > > > >> > >> > >>>
> > >> > > > >> > >> > >>>
> > >> > > > >> > >> > >>
> > >> > > > >> > >> > >>
> > >> > > > >> > >> > >> --
> > >> > > > >> > >> > >>
> > >> > > > >> > >> > >> Michael J. Erickson, Ph.D
> > >> > > > >> > >> > >> Cooperative Institute for Research in
Environmental
> > >> > Sciences
> > >> > > > >> > (CIRES)
> > >> > > > >> > >> > >> CIRES Contractor for the Weather Prediction
Center
> > >> (WPC)
> > >> > > > >> > >> > >>
> > >> > > > >> > >> > >> Phone: 301-683-1546 <(301)%20683-1546>
> > >> <(301)%20683-1546>
> > >> > > > >> > >> > >>
> > >> > > > >> > >> > >>
> > >> > > > >> > >> > >
> > >> > > > >> > >> > >
> > >> > > > >> > >> > > --
> > >> > > > >> > >> > >
> > >> > > > >> > >> > > Michael J. Erickson, Ph.D
> > >> > > > >> > >> > > Cooperative Institute for Research in
Environmental
> > >> > Sciences
> > >> > > > >> (CIRES)
> > >> > > > >> > >> > > CIRES Contractor for the Weather Prediction
Center
> > (WPC)
> > >> > > > >> > >> > >
> > >> > > > >> > >> > > Phone: 301-683-1546 <(301)%20683-1546>
> > >> <(301)%20683-1546>
> > >> > > > >> > >> > >
> > >> > > > >> > >> > >
> > >> > > > >> > >> >
> > >> > > > >> > >> >
> > >> > > > >> > >> > --
> > >> > > > >> > >> >
> > >> > > > >> > >> > Michael J. Erickson, Ph.D
> > >> > > > >> > >> > Cooperative Institute for Research in
Environmental
> > >> Sciences
> > >> > > > >> (CIRES)
> > >> > > > >> > >> > CIRES Contractor for the Weather Prediction
Center
> (WPC)
> > >> > > > >> > >> >
> > >> > > > >> > >> > Phone: 301-683-1546 <(301)%20683-1546>
> > >> > > > >> > >> >
> > >> > > > >> > >> >
> > >> > > > >> > >>
> > >> > > > >> > >>
> > >> > > > >> > >
> > >> > > > >> > >
> > >> > > > >> > > --
> > >> > > > >> > >
> > >> > > > >> > > Michael J. Erickson, Ph.D
> > >> > > > >> > > Cooperative Institute for Research in
Environmental
> > Sciences
> > >> > > (CIRES)
> > >> > > > >> > > CIRES Contractor for the Weather Prediction Center
(WPC)
> > >> > > > >> > >
> > >> > > > >> > > Phone: 301-683-1546 <(301)%20683-1546>
> <(301)%20683-1546>
> > >> > > > >> > >
> > >> > > > >> > >
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >> > --
> > >> > > > >> >
> > >> > > > >> > Michael J. Erickson, Ph.D
> > >> > > > >> > Cooperative Institute for Research in Environmental
> Sciences
> > >> > (CIRES)
> > >> > > > >> > CIRES Contractor for the Weather Prediction Center
(WPC)
> > >> > > > >> >
> > >> > > > >> > Phone: 301-683-1546 <(301)%20683-1546>
> > >> > > > >> >
> > >> > > > >> >
> > >> > > > >>
> > >> > > > >>
> > >> > > > >
> > >> > > > >
> > >> > > > > --
> > >> > > > >
> > >> > > > > Michael J. Erickson, Ph.D
> > >> > > > > Cooperative Institute for Research in Environmental
Sciences
> > >> (CIRES)
> > >> > > > > CIRES Contractor for the Weather Prediction Center
(WPC)
> > >> > > > >
> > >> > > > > Phone: 301-683-1546 <(301)%20683-1546> <(301)%20683-
1546>
> > >> > > > >
> > >> > > > >
> > >> > > >
> > >> > > >
> > >> > > > --
> > >> > > >
> > >> > > > Michael J. Erickson, Ph.D
> > >> > > > Cooperative Institute for Research in Environmental
Sciences
> > (CIRES)
> > >> > > > CIRES Contractor for the Weather Prediction Center (WPC)
> > >> > > >
> > >> > > > Phone: 301-683-1546 <(301)%20683-1546>
> > >> > > >
> > >> > > >
> > >> > >
> > >> > >
> > >> >
> > >> >
> > >> > --
> > >> >
> > >> > Michael J. Erickson, Ph.D
> > >> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > >> > CIRES Contractor for the Weather Prediction Center (WPC)
> > >> >
> > >> > Phone: 301-683-1546 <(301)%20683-1546>
> > >> >
> > >> >
> > >>
> > >>
> > >
> > >
> > > --
> > >
> > > Michael J. Erickson, Ph.D
> > > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > > CIRES Contractor for the Weather Prediction Center (WPC)
> > >
> > > Phone: 301-683-1546 <(301)%20683-1546>
> > >
> > >
> >
> >
> > --
> >
> > Michael J. Erickson, Ph.D
> > Cooperative Institute for Research in Environmental Sciences
(CIRES)
> > CIRES Contractor for the Weather Prediction Center (WPC)
> >
> > Phone: 301-683-1546
> >
> >
>
>
--
Michael J. Erickson, Ph.D
Cooperative Institute for Research in Environmental Sciences (CIRES)
CIRES Contractor for the Weather Prediction Center (WPC)
Phone: 301-683-1546
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