[Met_help] [rt.rap.ucar.edu #81634] History for MET v6 on Yellowstone
Julie Prestopnik via RT
met_help at ucar.edu
Wed Aug 16 14:52:37 MDT 2017
----------------------------------------------------------------
Initial Request
----------------------------------------------------------------
Dear MET Help staff,
I hope you are doing well at your end.
I am trying to use MET v6 on Yellowstone but am having trouble. I cannot
use some binaries.
I am using the preinstalled binaries in:
/glade/p/ral/jnt/MET/MET_releases/met-6.0/bin
when I try to use grid_stat or stat_analysis I got this message:
/glade/p/ral/jnt/MET/MET_releases/met-6.0/bin/stat_analysis: error while
loading shared libraries: libgsl.so.19: cannot open shared object file: No
such file or directory
However, when using pcp_combine or regrid_data_plane the binaries display
their command line options
I loaded the "gsl" module but still cannot run the binaries
I use the default shell and my current modules are:
Currently Loaded Modules:
1) nco/4.5.5 3) ncarbinlibs/1.1 5) ncarcompilers/1.0 7)
ncview/2.1.1 9) R/3.0.1.shared
2) ncarenv/1.0 4) intel/12.1.5 6) netcdf/4.3.0 8) impi/
4.0.3.008 10) gsl/1.16
which include the gsl I aforementioned.
Could you please advice on how to set the environment ??
As a note, I've been using MET v4.1 on Yellowstone for a while without
issues. I'm trying to upgrade my scripts to incorporate MET's new features.
Thanks for your time
Best regards,
Victor
----------------------------------------------------------------
Complete Ticket History
----------------------------------------------------------------
Subject: MET v6 on Yellowstone
From: Julie Prestopnik
Time: Wed Aug 16 12:09:45 2017
Hi Victor.
I just logged on to yellowstone and ran:
module use /glade/p/ral/jnt/MET/MET_releases/modulefiles
module load met
to load met-6.0.
I was able to run grid_stat without any problems. Perhaps there is a
conflict with an already loaded module?
Before running the commands above, I ran "module list" and saw that
the
following were loaded already:
1) ncarenv/1.0 2) ncarbinlibs/1.1 3) intel/12.1.5 4)
ncarcompilers/1.0 5) netcdf/4.3.0
After I ran the commands above, I ran "module list" again and saw that
the
following were loaded now:
1) ncarenv/1.0 2) ncarbinlibs/1.1 3) ncarcompilers/1.0 4)
met/6.0 5) intel/12.1.5 6) netcdf/4.3.3.1
When I run "grid_stat" and "stat_analysis", I get the usage statements
that
I expect.
You could try getting a fresh shell and starting over, or you could
try
running "module purge" before loading the module use and module load
commands for MET.
Please give one of those a try and let us know how it goes. I hope
that
helps!
Julie
On Wed, Aug 16, 2017 at 11:57 AM, Victor Almanza via RT
<met_help at ucar.edu>
wrote:
>
> Wed Aug 16 11:57:21 2017: Request 81634 was acted upon.
> Transaction: Ticket created by victor.al.vlz at gmail.com
> Queue: met_help
> Subject: MET v6 on Yellowstone
> Owner: Nobody
> Requestors: victor.al.vlz at gmail.com
> Status: new
> Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=81634 >
>
>
> Dear MET Help staff,
>
> I hope you are doing well at your end.
>
> I am trying to use MET v6 on Yellowstone but am having trouble. I
cannot
> use some binaries.
>
> I am using the preinstalled binaries in:
>
> /glade/p/ral/jnt/MET/MET_releases/met-6.0/bin
>
> when I try to use grid_stat or stat_analysis I got this message:
>
> /glade/p/ral/jnt/MET/MET_releases/met-6.0/bin/stat_analysis: error
while
> loading shared libraries: libgsl.so.19: cannot open shared object
file: No
> such file or directory
>
> However, when using pcp_combine or regrid_data_plane the binaries
display
> their command line options
>
> I loaded the "gsl" module but still cannot run the binaries
>
> I use the default shell and my current modules are:
>
> Currently Loaded Modules:
> 1) nco/4.5.5 3) ncarbinlibs/1.1 5) ncarcompilers/1.0 7)
> ncview/2.1.1 9) R/3.0.1.shared
> 2) ncarenv/1.0 4) intel/12.1.5 6) netcdf/4.3.0 8)
impi/
> 4.0.3.008 10) gsl/1.16
>
> which include the gsl I aforementioned.
>
> Could you please advice on how to set the environment ??
>
> As a note, I've been using MET v4.1 on Yellowstone for a while
without
> issues. I'm trying to upgrade my scripts to incorporate MET's new
features.
>
> Thanks for your time
>
> Best regards,
>
> Victor
>
>
------------------------------------------------
Subject: MET v6 on Yellowstone
From: Victor Almanza
Time: Wed Aug 16 12:24:25 2017
Hi Julie
Thank you very much for the quick reply.
It is working. I see that now I have to load a module for metv6
itself.
Somehow, for v4.1 I only needed the binaries.
It is clear now.
Thanks again for your help,
Best regards,
Victor
On Wed, Aug 16, 2017 at 11:09 AM, Julie Prestopnik via RT
<met_help at ucar.edu
> wrote:
> Hi Victor.
>
> I just logged on to yellowstone and ran:
>
> module use /glade/p/ral/jnt/MET/MET_releases/modulefiles
> module load met
>
> to load met-6.0.
>
> I was able to run grid_stat without any problems. Perhaps there is
a
> conflict with an already loaded module?
>
> Before running the commands above, I ran "module list" and saw that
the
> following were loaded already:
>
> 1) ncarenv/1.0 2) ncarbinlibs/1.1 3) intel/12.1.5 4)
> ncarcompilers/1.0 5) netcdf/4.3.0
>
> After I ran the commands above, I ran "module list" again and saw
that the
> following were loaded now:
>
> 1) ncarenv/1.0 2) ncarbinlibs/1.1 3) ncarcompilers/1.0 4)
> met/6.0 5) intel/12.1.5 6) netcdf/4.3.3.1
>
> When I run "grid_stat" and "stat_analysis", I get the usage
statements that
> I expect.
>
> You could try getting a fresh shell and starting over, or you could
try
> running "module purge" before loading the module use and module load
> commands for MET.
>
> Please give one of those a try and let us know how it goes. I hope
that
> helps!
>
> Julie
>
>
> On Wed, Aug 16, 2017 at 11:57 AM, Victor Almanza via RT
<met_help at ucar.edu
> >
> wrote:
>
> >
> > Wed Aug 16 11:57:21 2017: Request 81634 was acted upon.
> > Transaction: Ticket created by victor.al.vlz at gmail.com
> > Queue: met_help
> > Subject: MET v6 on Yellowstone
> > Owner: Nobody
> > Requestors: victor.al.vlz at gmail.com
> > Status: new
> > Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=81634 >
> >
> >
> > Dear MET Help staff,
> >
> > I hope you are doing well at your end.
> >
> > I am trying to use MET v6 on Yellowstone but am having trouble. I
cannot
> > use some binaries.
> >
> > I am using the preinstalled binaries in:
> >
> > /glade/p/ral/jnt/MET/MET_releases/met-6.0/bin
> >
> > when I try to use grid_stat or stat_analysis I got this message:
> >
> > /glade/p/ral/jnt/MET/MET_releases/met-6.0/bin/stat_analysis: error
while
> > loading shared libraries: libgsl.so.19: cannot open shared object
file:
> No
> > such file or directory
> >
> > However, when using pcp_combine or regrid_data_plane the binaries
display
> > their command line options
> >
> > I loaded the "gsl" module but still cannot run the binaries
> >
> > I use the default shell and my current modules are:
> >
> > Currently Loaded Modules:
> > 1) nco/4.5.5 3) ncarbinlibs/1.1 5) ncarcompilers/1.0
7)
> > ncview/2.1.1 9) R/3.0.1.shared
> > 2) ncarenv/1.0 4) intel/12.1.5 6) netcdf/4.3.0
8)
> impi/
> > 4.0.3.008 10) gsl/1.16
> >
> > which include the gsl I aforementioned.
> >
> > Could you please advice on how to set the environment ??
> >
> > As a note, I've been using MET v4.1 on Yellowstone for a while
without
> > issues. I'm trying to upgrade my scripts to incorporate MET's new
> features.
> >
> > Thanks for your time
> >
> > Best regards,
> >
> > Victor
> >
> >
>
>
------------------------------------------------
Subject: MET v6 on Yellowstone
From: Julie Prestopnik
Time: Wed Aug 16 14:52:01 2017
Hi Victor. Great news! Thank you for letting us know that it is
working
for you now. I'll go ahead and close this ticket.
Julie
On Wed, Aug 16, 2017 at 12:24 PM, Victor Almanza via RT
<met_help at ucar.edu>
wrote:
>
> <URL: https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=81634 >
>
> Hi Julie
>
> Thank you very much for the quick reply.
>
> It is working. I see that now I have to load a module for metv6
itself.
> Somehow, for v4.1 I only needed the binaries.
>
> It is clear now.
>
> Thanks again for your help,
>
> Best regards,
>
> Victor
>
> On Wed, Aug 16, 2017 at 11:09 AM, Julie Prestopnik via RT <
> met_help at ucar.edu
> > wrote:
>
> > Hi Victor.
> >
> > I just logged on to yellowstone and ran:
> >
> > module use /glade/p/ral/jnt/MET/MET_releases/modulefiles
> > module load met
> >
> > to load met-6.0.
> >
> > I was able to run grid_stat without any problems. Perhaps there
is a
> > conflict with an already loaded module?
> >
> > Before running the commands above, I ran "module list" and saw
that the
> > following were loaded already:
> >
> > 1) ncarenv/1.0 2) ncarbinlibs/1.1 3) intel/12.1.5 4)
> > ncarcompilers/1.0 5) netcdf/4.3.0
> >
> > After I ran the commands above, I ran "module list" again and saw
that
> the
> > following were loaded now:
> >
> > 1) ncarenv/1.0 2) ncarbinlibs/1.1 3) ncarcompilers/1.0 4)
> > met/6.0 5) intel/12.1.5 6) netcdf/4.3.3.1
> >
> > When I run "grid_stat" and "stat_analysis", I get the usage
statements
> that
> > I expect.
> >
> > You could try getting a fresh shell and starting over, or you
could try
> > running "module purge" before loading the module use and module
load
> > commands for MET.
> >
> > Please give one of those a try and let us know how it goes. I
hope that
> > helps!
> >
> > Julie
> >
> >
> > On Wed, Aug 16, 2017 at 11:57 AM, Victor Almanza via RT <
> met_help at ucar.edu
> > >
> > wrote:
> >
> > >
> > > Wed Aug 16 11:57:21 2017: Request 81634 was acted upon.
> > > Transaction: Ticket created by victor.al.vlz at gmail.com
> > > Queue: met_help
> > > Subject: MET v6 on Yellowstone
> > > Owner: Nobody
> > > Requestors: victor.al.vlz at gmail.com
> > > Status: new
> > > Ticket <URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=81634
> >
> > >
> > >
> > > Dear MET Help staff,
> > >
> > > I hope you are doing well at your end.
> > >
> > > I am trying to use MET v6 on Yellowstone but am having trouble.
I
> cannot
> > > use some binaries.
> > >
> > > I am using the preinstalled binaries in:
> > >
> > > /glade/p/ral/jnt/MET/MET_releases/met-6.0/bin
> > >
> > > when I try to use grid_stat or stat_analysis I got this message:
> > >
> > > /glade/p/ral/jnt/MET/MET_releases/met-6.0/bin/stat_analysis:
error
> while
> > > loading shared libraries: libgsl.so.19: cannot open shared
object file:
> > No
> > > such file or directory
> > >
> > > However, when using pcp_combine or regrid_data_plane the
binaries
> display
> > > their command line options
> > >
> > > I loaded the "gsl" module but still cannot run the binaries
> > >
> > > I use the default shell and my current modules are:
> > >
> > > Currently Loaded Modules:
> > > 1) nco/4.5.5 3) ncarbinlibs/1.1 5) ncarcompilers/1.0
7)
> > > ncview/2.1.1 9) R/3.0.1.shared
> > > 2) ncarenv/1.0 4) intel/12.1.5 6) netcdf/4.3.0
8)
> > impi/
> > > 4.0.3.008 10) gsl/1.16
> > >
> > > which include the gsl I aforementioned.
> > >
> > > Could you please advice on how to set the environment ??
> > >
> > > As a note, I've been using MET v4.1 on Yellowstone for a while
without
> > > issues. I'm trying to upgrade my scripts to incorporate MET's
new
> > features.
> > >
> > > Thanks for your time
> > >
> > > Best regards,
> > >
> > > Victor
> > >
> > >
> >
> >
>
>
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