[Met_help] [rt.rap.ucar.edu #56047] History for undefined reference to `H5Fflush' when compiling met 3.1

[Paul Oldenburg via RT]

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  Initial Request
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Hi 

I have been trying to compile MET 3.1 using NetCDF 4.1.3 & GCC 4.4.4 on a redhat 5.7 system. 
The error indicates a link can not find the HDF5 libs but I have been unable to add to the user_defs.mk to fix it. 

The NetCDF & GCC versions has compiled & run WRF 3.2.1 with no problems. 

Any suggestions? 

Robert Flanigan 
robert.t.flanigan.civ at mail.mil 




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  Complete Ticket History
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Subject: Re: [rt.rap.ucar.edu #56047] undefined reference to `H5Fflush' when compiling met 3.1
From: Paul Oldenburg
Time: Tue Apr 24 10:00:38 2012

Robert,

I recommend that you follow the directions for compiling the instance
of NetCDF that you plan to use with MET by
following the instructions in the MET online tutorial here:

http://www.dtcenter.org/met/users/support/online_tutorial/METv3.1/compilation/req_libs.php

Basically, the key is to disable the use of NetCDF4, which relies on
HDF libraries.  Please let me know if this does not
fix your problem.

Paul


On 04/24/2012 09:51 AM, rflanigan at q.com via RT wrote:
>
> Tue Apr 24 09:51:30 2012: Request 56047 was acted upon.
> Transaction: Ticket created by rflanigan at q.com
>         Queue: met_help
>       Subject: undefined reference to `H5Fflush' when compiling met
3.1
>         Owner: Nobody
>    Requestors: rflanigan at q.com
>        Status: new
>   Ticket<URL:
https://rt.rap.ucar.edu/rt/Ticket/Display.html?id=56047>
>
>
> Hi
>
> I have been trying to compile MET 3.1 using NetCDF 4.1.3&  GCC 4.4.4
on a redhat 5.7 system.
> The error indicates a link can not find the HDF5 libs but I have
been unable to add to the user_defs.mk to fix it.
>
> The NetCDF&  GCC versions has compiled&  run WRF 3.2.1 with no
problems.
>
> Any suggestions?
>
> Robert Flanigan
> robert.t.flanigan.civ at mail.mil
>
>


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