[Dart-dev] DART/branches Revision: 12953

[dart at ucar.edu]

thoar at ucar.edu
2019-01-07 14:34:42 -0700 (Mon, 07 Jan 2019)
72
Renaming to be more accurate.
This is very similar to setup_CESM2_1_80




Deleted: DART/branches/recam/models/cam-fv/shell_scripts/cesm2_1/setup_netcdf_test
===================================================================
--- DART/branches/recam/models/cam-fv/shell_scripts/cesm2_1/setup_netcdf_test	2019-01-07 21:31:22 UTC (rev 12952)
+++ DART/branches/recam/models/cam-fv/shell_scripts/cesm2_1/setup_netcdf_test	2019-01-07 21:34:42 UTC (rev 12953)
@@ -1,1240 +0,0 @@
-#!/bin/csh -f
-#
-# DART software - Copyright UCAR. This open source software is provided
-# by UCAR, "as is", without charge, subject to all terms of use at
-# http://www.image.ucar.edu/DAReS/DART/DART_download
-#
-# DART $Id$
-#
-# This script can be run interactively, but on some systems (e.g. cheyenne)
-# it takes longer than is allowed for an interactive job.
-# In that case, it can be run as a batch job using the directives below,
-# or using "qcmd -q share -l select=1 -- <thisfilename>".
-#
-#--------------------------------------------
-#
-# The job name should be the name of this script(file),
-# or this file may not be archived in $caseroot
-#
-# Resources to specify:
-#    select=#nodes
-#    ncpus=#CPUs/node
-#    mpiprocs=#MPI_tasks/node
-#
-#PBS  -N setup_netcdf_test
-#PBS  -A P86850054
-#PBS  -q share
-#PBS  -l select=1:ncpus=4:mpiprocs=4
-#PBS  -l walltime=00:20:00
-#PBS  -m ae
-#PBS  -M thoar at ucar.edu
-#PBS  -o setup_test.bld0
-#PBS  -j oe
-#
-# ---------------------
-# Purpose
-# ---------------------
-#
-# This script is designed to set up, stage, and build a multi-instance,
-# multi-driver, CESM using an F compset, where CAM-FV, CLM and CICE are active.
-# In contrast to setup_hybrid, it also sets up the environment for doing
-# a CAM assimilation by setting up and running DART_config.
-# It is intended to be used after you have tested the basic set up
-# of CESM and DART for your case, using setup_hybrid and DART_config.
-# It also provides more mechanisms for optimizing the assimilation
-# for scientific studies.
-#
-# Because the atmosphere assimilations typically occur every 6 hours,
-# the methodology here reflects that. All of CESM stops every 6 hours
-# so that a CAM output file will be available for assimilation.
-#
-# ${caseroot}/DART_config is automatically run by this script and will
-# augment the CESM case with the required setup and configuration to use DART
-# to perform an assimilation.
-#
-# ---------------------
-# How to use this script.
-# ---------------------
-#
-# -- You will have to read and understand the script in its entirety.
-#    You will have to modify things outside this script.
-#    Instructions for what to change to use the CAM-Chem or WACCM are
-#    outlined in the models/cam-fv/model_mod.html documentation.
-#
-# -- Examine the whole script to identify things to change for your experiments.
-#
-# -- Edit this script in the $DART/models/cam-fv/shell_scripts directory
-#    or copy it and its dependent scripts to somewhere where it will be preserved.
-#    It archives itself to the $caseroot directory during its execution.
-#
-# -- Locate or create the initial ensemble files that CESM will need.
-#    The initial ensemble can come from a single- or multi-instance reference case.
-#
-# -- DOCN: The compsets required by this script use a single data ocean.
-#    This script can use a daily, 1/4 degree resolution, ocean data set,
-#    in place of the monthly, 1 or 2 degree set.
-#
-# -- Run this script. When it is executed, it will create:
-#    1) a CESM 'CASE' ($caseroot) directory, where the model will be built,
-#    2) a run directory, where each forecast + assimilation cycle will take place,
-#    3) a bld directory for the executables.
-#    4) CESM's short term archiver (st_archive) will use a fourth directory for
-#    storage of model output until it can be moved to long term storage (HPSS)
-#
-#    This script also executes ${caseroot}/DART_config which augments the case
-#    with all the pieces necessary to run DART in the first job.
-#    Read the instructions in that file too.
-#
-# -- Confirm the variable values in $caseroot/env_{build,run,batch,...}.xml.
-#
-# -- (if running DART) Edit the DART input.nml that appears in the ${caseroot}
-#    directory to replace default values with your preferred values.
-#
-# -- Submit the job using ${caseroot}/case.submit -M begin,end
-#
-# ---------------------
-# Important features