[Dart-dev] DART/branches Revision: 11939

[dart at ucar.edu]

mizzi at ucar.edu
2017-09-18 19:08:15 -0600 (Mon, 18 Sep 2017)
37
More clean up related to test case.




Deleted: DART/branches/mizzi/models/wrf_chem/run_scripts/RUN_REAL_TIME/APM_NOTES
===================================================================
--- DART/branches/mizzi/models/wrf_chem/run_scripts/RUN_REAL_TIME/APM_NOTES	2017-09-18 23:42:17 UTC (rev 11938)
+++ DART/branches/mizzi/models/wrf_chem/run_scripts/RUN_REAL_TIME/APM_NOTES	2017-09-19 01:08:15 UTC (rev 11939)
@@ -1,16 +0,0 @@
-March 20, 2017;
-
-The following has ADD_EMISS=false and VARLOC=true
-
-Re-run FRAPPE initial for test at 2014072518.  Question is whether wrfchem runs beyond zero hour-forecast.  Problem in preprocess_obs with the TAUAER fields not being in the wrfinput file.  TAUAER fields are said to be in DART state vector but are not in the wrfinput file.  Try a fix in real (does not work).Try removing from state vector for this cycle (remove TAUAER and PM fields).  Problem solved by runningpreprocess with default_state_variables=true.  This run worked. 
-
-PANDA_RETR intitial at 2014072418 worked.  But for the first cycle at 2014072500 wrfchen fails.  
-
-Re-run KORUS_RETR initial at 2016052500 to see if it works.  Problem in wrfchem_initial with the job queue - cannot be exclusive when submitted to geyser (fixed and resubmtted). 
-
-Re-run 2008CASE initial at 2008060106 to see if it works.  This run worked.
-
-March 21, 2017:
-The problem with the initial forecast seems to be solved.  The next set of tests is for the first assimilation cycle.
-
-NEED TO STANDARDIZE THE input.nml CREATIONS.
\ No newline at end of file

Added: DART/branches/mizzi/models/wrf_chem/run_scripts/RUN_REAL_TIME/real_time_FRAPPE_RETR_MA.ksh
===================================================================
--- DART/branches/mizzi/models/wrf_chem/run_scripts/RUN_REAL_TIME/real_time_FRAPPE_RETR_MA.ksh	                        (rev 0)
+++ DART/branches/mizzi/models/wrf_chem/run_scripts/RUN_REAL_TIME/real_time_FRAPPE_RETR_MA.ksh	2017-09-19 01:08:15 UTC (rev 11939)
@@ -0,0 +1,5126 @@
+#!/bin/ksh -aeux
+##########################################################################
+# Purpose: Set global environment variables for real_time_wrf_chem
+#
+# NOTE: To generate the chemistry perturbations check NL_SW_GENERATE comments
+# To use the same purturbastions from one cycle to the next one must copy
+# the pert_file_emiss and pert_file_icbc file to the run directory
+#
+#########################################################################
+#
+# CYCLE DATE-TIME:
+export CYCLE_STR_DATE=2014071400
+export CYCLE_STR_DATE=2014072400
+export CYCLE_END_DATE=${CYCLE_STR_DATE}
+export CYCLE_END_DATE=2014072400
+export CYCLE_DATE=${CYCLE_STR_DATE}
+export NL_FAC_OBS_ERROR_MOPITT=1.00
+export NL_FAC_OBS_ERROR_IASI=1.00
+export RETRIEVAL_TYPE=RETR
+#
+export USE_LOG_CO=false
+if [[ ${USE_LOG_CO} == true ]]; then
+   export CO_MIN=NULL
+   export CO_MAX=NULL
+   export USE_LOG_CO_LOGIC=.true.
+else
+   export CO_MIN=1.e-4
+   export CO_MAX=NULL
+   export USE_LOG_CO_LOGIC=.false.
+fi
+#
+# If VARLOC = true, then INDEP_CHEM_ASIM = false
+# If INDEP_CHEM_ASIM = true, then VARLOC = false
+# VARLOC and INDEP_CHEM_ASIM may both be false but
+# they may not both be true
+#
+export VARLOC=.false.
+export INDEP_CHEM_ASIM=.true.
+#
+export ADD_EMISS=.false.
+export EMISS_DAMP_CYCLE=0.5
+export EMISS_DAMP_INTRA_CYCLE=0.5
+#
+let BAND_ISO_VAL_CO=.09
+#
+# Run fine scale forecast only
+export RUN_FINE_SCALE=false
+#
+# Restart fine scale forecast only
+export RUN_FINE_SCALE_RESTART=false
+export RESTART_DATE=2014072312
+#
+if [[ ${RUN_FINE_SCALE_RESTART} = "true" ]]; then
+   export RUN_FINE_SCALE=true
+fi
+#
+# Run WRF-Chem for failed forecasts
+export RUN_SPECIAL_FORECAST=false
+export NUM_SPECIAL_FORECAST=4
+export SPECIAL_FORECAST_FAC=1.
+export SPECIAL_FORECAST_FAC=1./2.
+export SPECIAL_FORECAST_FAC=2./3.
+export SPECIAL_FORECAST_MEM[1]=2
+export SPECIAL_FORECAST_MEM[2]=5
+export SPECIAL_FORECAST_MEM[3]=9
+export SPECIAL_FORECAST_MEM[4]=10
+export SPECIAL_FORECAST_MEM[5]=14
+export SPECIAL_FORECAST_MEM[6]=15
+export SPECIAL_FORECAST_MEM[7]=16
+export SPECIAL_FORECAST_MEM[8]=17
+export SPECIAL_FORECAST_MEM[9]=18
+export SPECIAL_FORECAST_MEM[10]=19
+export SPECIAL_FORECAST_MEM[11]=20