[Dart-dev] DART/branches Revision: 11425

Thu Mar 30 16:40:17 MDT 2017

hendric at ucar.edu
2017-03-30 16:40:13 -0600 (Thu, 30 Mar 2017)
524
adding .nml files in the directories for f90 files that have
a namelist.  this is necssary when constructing a default
nmls with mkmf.

fixing the path names for obs_kind and obs_def in all of the html 
documentation and updating content to some of the pages, especially
the index.html page which now includes more links to new converters
source code and forward operators.

removing the summer asp tutorial (2003) and corresponding images.
I have moved these to git.ucar.edu/dares-group/workshops to preserve
the history.




Modified: DART/branches/rma_trunk/assimilation_code/location/threed_cartesian/location_mod.html
===================================================================

--- DART/branches/rma_trunk/assimilation_code/location/threed_cartesian/location_mod.html	2017-03-30 19:16:55 UTC (rev 11424)
+++ DART/branches/rma_trunk/assimilation_code/location/threed_cartesian/location_mod.html	2017-03-30 22:40:13 UTC (rev 11425)
@@ -47,7 +47,7 @@
 cartesian coordinates, cylindrical coordinates, etc.  DART provides
 about half a dozen possible coordinate systems, and others can be added.  
 The most common one for geophysical models is the
-<a href="../threed_sphere/location.html">threed_sphere</a> version.
+<a href="../threed_sphere/location_mod.html">threed_sphere</a> version.
 This document describes an alternative 3D cartesian coordinate system.
 </P>
 <P><strong>Note that only one location module can be compiled into

Modified: DART/branches/rma_trunk/assimilation_code/location/threed_sphere/location_mod.html
===================================================================
--- DART/branches/rma_trunk/assimilation_code/location/threed_sphere/location_mod.html	2017-03-30 19:16:55 UTC (rev 11424)
+++ DART/branches/rma_trunk/assimilation_code/location/threed_sphere/location_mod.html	2017-03-30 22:40:13 UTC (rev 11425)
@@ -506,7 +506,7 @@
 <TR><TD>maintain_original_vert</TD>
     <TD>logical</TD>
     <TD>If using per-type specialized localization distances
-(see <a href="../../assimilation_code/modules/assimilation/assim_tools_mod.html#Namelist">assim_tools_mod</a>)
+(see <a href="../../modules/assimilation/assim_tools_mod.html#Namelist">assim_tools_mod</a>)
 by default the vertical distances are altered also.  To maintain
 the original vertical scaling while changing the horizontal, set this to true.
 </TD></TR>

Modified: DART/branches/rma_trunk/assimilation_code/modules/assimilation/adaptive_inflate_mod.html
===================================================================
--- DART/branches/rma_trunk/assimilation_code/modules/assimilation/adaptive_inflate_mod.html	2017-03-30 19:16:55 UTC (rev 11424)
+++ DART/branches/rma_trunk/assimilation_code/modules/assimilation/adaptive_inflate_mod.html	2017-03-30 22:40:13 UTC (rev 11425)
@@ -688,7 +688,7 @@
 <div class="top">[<a href="#">top</a>]</div><hr />
 <H2>NAMELIST</H2>
 <P>The adaptive_inflate module no longer has a namelist. 
-   Control has been moved to <a href="../filter/filter.html#Namelist">&amp;filter_nml</a> in filter.
+   Control has been moved to <a href="filter_mod.html#Namelist">&amp;filter_nml</a> in filter.
 </P>
 
 <!--==================================================================-->

Modified: DART/branches/rma_trunk/assimilation_code/modules/assimilation/assim_tools_mod.html
===================================================================
--- DART/branches/rma_trunk/assimilation_code/modules/assimilation/assim_tools_mod.html	2017-03-30 19:16:55 UTC (rev 11424)
+++ DART/branches/rma_trunk/assimilation_code/modules/assimilation/assim_tools_mod.html	2017-03-30 22:40:13 UTC (rev 11425)
@@ -169,7 +169,7 @@
 pressure in the vertical but you wish to localize in meters), then you
 will need to modify or add a <em class=code>get_close()</em> routine
 in your <em class=file>model_mod.f90</em> file.  See the discussion in
-the <a href="../location/threed_sphere/location_mod.html">location module</a>
+the <a href="../../location/threed_sphere/location_mod.html">location module</a>
 documentation for how to transform vertical coordinates before localization.
 <br /> <br />
 <dt>

Modified: DART/branches/rma_trunk/assimilation_code/modules/observations/DEFAULT_obs_kind_mod.html
===================================================================
--- DART/branches/rma_trunk/assimilation_code/modules/observations/DEFAULT_obs_kind_mod.html	2017-03-30 19:16:55 UTC (rev 11424)
+++ DART/branches/rma_trunk/assimilation_code/modules/observations/DEFAULT_obs_kind_mod.html	2017-03-30 22:40:13 UTC (rev 11425)
@@ -48,7 +48,7 @@
 <br>
 <br> 
 To add a new specific observation type, see the
-<a href="../../observations/forward_operators/obs_def_mod.html">obs_def_mod</a> documentation.
+<a href="../../../observations/forward_operators/obs_def_mod.html">obs_def_mod</a> documentation.
 If adding this type includes defining a new generic observation kind,
 then the kind must be added to the table in this file, with a unique
 integer value defined for it.

Modified: DART/branches/rma_trunk/assimilation_code/modules/observations/obs_kind_mod.html
===================================================================
--- DART/branches/rma_trunk/assimilation_code/modules/observations/obs_kind_mod.html	2017-03-30 19:16:55 UTC (rev 11424)
+++ DART/branches/rma_trunk/assimilation_code/modules/observations/obs_kind_mod.html	2017-03-30 22:40:13 UTC (rev 11425)
@@ -75,8 +75,8 @@
 </P> <P>
 Typically kinds are used by 
 model-interface files <em class="file">models/xx/model_mod.f90</em>,
-observation forward operator files <em class="file">obs_def/obs_def_xx_mod.f90</em>,
-and observation converter programs <em class="file">observations/xx/xx.f90</em>.
+observation forward operator files <em class="file">observations/forward_operators/obs_def_xx_mod.f90</em>,
+and observation converter programs <em class="file">observations/obs_converters/xx/xx.f90</em>.
 </P> <P>
 The obs_kind module being described here is created by the program
 <em class="file">preprocess</em> from two kinds of input files. 
@@ -105,7 +105,7 @@
 <H4>Adding Additional Kinds</H4>
 <P>
 To add an additional kind, edit the
-<em class="file">obs_kind/DEFAULT_obs_kind_mod.F90</em> file and
+<em class="file">assimilation_code/modules/observations/DEFAULT_obs_kind_mod.F90</em> file and
 add a unique number to the list of generic kinds at the top of the file.
 Then find the 
 <em class=unix>obs_kind_names</em> initializer statements
@@ -115,7 +115,7 @@
 If the number is larger than the current maximum,
 increase the value of <em class=unix>max_defined_quantities</em>.
 Run the <em class="file">preprocess</em> program to generate the
-<em class="file">obs_kind/obs_kind_mod.f90</em> file which will then be
+<em class="file">assimilation_code/modules/observations/obs_kind_mod.f90</em> file which will then be
 used by the rest of the DART system.
